mRNA_Ecto-sp6_S_contig100.725.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig100.725.1 vs. uniprot
Match: A0A6H5L9A2_9PHAE (Fe-ADH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L9A2_9PHAE) HSP 1 Score: 760 bits (1962), Expect = 1.210e-273 Identity = 403/428 (94.16%), Postives = 414/428 (96.73%), Query Frame = 1 Query: 1 MRCRLASIRRNLSSRLSPNPKLIVEAECSWTKVVAQVSRHGRTCLAIADDNTPGQAAGRCLFELRKAGINCAMFTGRGAYPTADSIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGEGGNSKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAEDGESLTVALVDPILCTSLSKTQTAAMALTALSACVDALLAWELSLASGTPLQNGDALLDLGRRGIGAVAEGLPVALADGQNKVARELLAIGSVCAGQLAVATPAPPTQLVARATGSLLGRHSYPSVCAMVFPHVVGDMLSQASSFSGDAQAAEAIERALSISASLFLGDGNDGQALMSWLEAQEHELLDFGSLSSVDSTITAKDVATNIDMLLAIEEDTDAADRVWSAGGTADMADLIVG 1284 MRCRL SIRR LSS SP+PKLIVEA+CSWTKVVAQVSRHGRTCLAIADDNTPGQA GRCLFELRKAGINCAMFTGRGAYPTAD IDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGE G+SKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAE+GESLTVALVDPILCTSLSK+QTAAMALTALSACVDALLA EL+LASGTPLQNGDALLDLGRRGI AVAEGLPVALADG+NK+ARELL IGSVCAGQLAVATPAPPTQLVARATGSLLGRHSYPSVCAMVFPHVVGDMLSQA+SFSGDAQAAEAIERALS+SASLFLGDGNDGQALMSWLEAQE ELLDFGSLSSVDSTITAKDV TNIDMLLAIEEDT AADRVWSAGGT+DMAD IVG Sbjct: 1 MRCRLVSIRRKLSSCPSPSPKLIVEADCSWTKVVAQVSRHGRTCLAIADDNTPGQAVGRCLFELRKAGINCAMFTGRGAYPTADGIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGEDGHSKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAEEGESLTVALVDPILCTSLSKSQTAAMALTALSACVDALLARELALASGTPLQNGDALLDLGRRGIDAVAEGLPVALADGKNKLARELLTIGSVCAGQLAVATPAPPTQLVARATGSLLGRHSYPSVCAMVFPHVVGDMLSQANSFSGDAQAAEAIERALSLSASLFLGDGNDGQALMSWLEAQERELLDFGSLSSVDSTITAKDVVTNIDMLLAIEEDTAAADRVWSAGGTSDMADHIVG 428
BLAST of mRNA_Ecto-sp6_S_contig100.725.1 vs. uniprot
Match: A0A1V9ZLN1_9STRA (Fe-ADH domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZLN1_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 4.060e-14 Identity = 85/312 (27.24%), Postives = 138/312 (44.23%), Query Frame = 1 Query: 49 SPNPKLIVEAECSWTKVVAQVSRHGRTCLAIADDNTPGQAAGRCLFELRKAGINCAMFTGRGAYPTADSIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGEGGNSKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAEDGESLTVALVDPILCTSLSKTQTAAMALTALSACVDALLAWELSLASGTPLQNGDALLD-LGRRGIGAVAEGLPVALADGQNKVA----RELLAIGSVCAGQLAVATPAPPTQLVARATGSLLGRHSYPSVCAMVFPHVV 969 S +P+++ + S V + L D+ + A + L+KA I C MFT + T DSI++AR+ ARR+GA +++ G G +DT++A A L ++ G + P + A PL+ +PT AG G+ + LV E + + V ++DP+L S+ T+ ALTAL C+++ L + GD +D + GI VAE L L DG+ ++ RE L++GS+ + + AT V G + + VCA P V+ Sbjct: 29 SQHPRVLFGRKQSEQLSVVAPKVMSKALLVRDRDSGSEKRAQYAQYLLQKANIPCFMFTLQRDCATIDSINQARDHARRVGANGVIAFGGGNVMDTSRAIAALMANDGNAEDLAQGPLSLSH-------------RAAPLIVMPTVAGCGSEVSNEALVLDESAEAKLTFTKTPIIAEVVIIDPLLTVSVPMALTSQGALTALGQCIESFL-----------MNTGDEKVDEICLNGIRTVAEALASPLKDGKLQLNDMGFRERLSLGSLYSSLASCATGFGAAHSVGIGVGGMSDT-PHLQVCAAFLPLVI 315
BLAST of mRNA_Ecto-sp6_S_contig100.725.1 vs. uniprot
Match: A0A2R6GGT4_9EURY (Alcohol dehydrogenase n=3 Tax=unclassified Halobacteriales TaxID=38063 RepID=A0A2R6GGT4_9EURY) HSP 1 Score: 80.5 bits (197), Expect = 1.460e-12 Identity = 82/270 (30.37%), Postives = 125/270 (46.30%), Query Frame = 1 Query: 58 PKLIVEAECSWTKVVAQVSRHGRTCLAIADDNTPGQAAGRCLFELRKAGINCAMFTGRGAYPTADSIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGEGGNSKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAEDGESL-TVALVDPILCTSLSKTQTAAMALTALSACVDALL---AWELSLASGTPLQNGDALLDLGRRGIGAVAEGLPVALADGQNKVARELLAIGSVCAGQ 855 P+ +V + +V ++ G T L +A G+ R L AGI+ A++ PT +++ EA E R G C+V++G G IDTAKA L ++ G +++ G EG PA + PL A+PT+AG G+ A R +V + L E L TVA+ DP L +L + TA + AL+ ++A + AW +S L R I V LP + A+G + ARE + +G + AGQ Sbjct: 10 PEQVVVGRGAVDEVGDRLGERGSTALIVATGGVFGRYGDRVRDSLAAAGIDAAVYDEVRPDPTVENVREALETYRASGCDCLVALGGGSPIDTAKAVGVLAANGGEIREYAVDRAGY---EG------VPA-SIPPLAAVPTTAGTGSEAT-RSIVISDESTATKFLVVSTEVLPTVAVEDPELVATLPPSHTAFTGVDALTHAIEAYVSVHAWSMSDT-------------LARAAIERVGTALPASWANGDDLDAREAMLVGQLQAGQ 255
BLAST of mRNA_Ecto-sp6_S_contig100.725.1 vs. uniprot
Match: A0A7C4R5N7_9DELT (Iron-containing alcohol dehydrogenase n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A7C4R5N7_9DELT) HSP 1 Score: 80.5 bits (197), Expect = 1.740e-12 Identity = 85/240 (35.42%), Postives = 116/240 (48.33%), Query Frame = 1 Query: 133 LAIADDNTPGQAAGRCLFELRKAGINCAMFTGRGAYPTADSIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGEGGNSKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAEDGESLTVALVDPILCTSLSKTQTAAMALTALSACVDALLAWELSLASGTPLQNGDALLDLGRRGIGAVAEGLPVALADGQNKVARELLAIGSVCAG 852 L + TPG+AA L L G F RG PT +++ A E AR GA +V++G G IDTAKA + ++ G FL G+ G KP G LP VA+PT+AG+GA A ++ P V L +A+VDP L L TAA + AL+ ++A ++ PL DAL R GI A LPVA+ADG ++ ARE +A+ S+ G Sbjct: 76 LFVVTGATPGRAA-FLLEALALRGCAVKAFAVRGE-PTLETVGVALEEARAWGAEALVAIGGGAVIDTAKAVSGWCTNPGDPLDFLE---GI-----GKGKPLERPG--LPWVAVPTTAGSGAEATRNAVIRVPARRAKVSLRSPHLLPRLAVVDPELTLELPPAVTAATGMDALAQLLEAFVS-----RRANPLT--DALC---REGIPRAARALPVAVADGSDRRAREAMALASLFGG 293
BLAST of mRNA_Ecto-sp6_S_contig100.725.1 vs. uniprot
Match: A0A1V9Y4R8_9STRA (Fe-ADH domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y4R8_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 3.250e-12 Identity = 86/277 (31.05%), Postives = 126/277 (45.49%), Query Frame = 1 Query: 184 FELRKAGINCAMFTGRGAYPTADSIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGEGGNSKPRTPAGN-ALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAEDGESLTVALVDPILCTSLSKTQTAAMALTALSACVDALLAWELSLASGTPLQNGDALLD-LGRRGIGAVAEGLPVALADGQ---NKVA-RELLAIGSVCAGQLAVATPAPPTQLVARATGSLLGRHSYPSVCAMVFP---HVVGDMLSQ 987 F L+KA I C MFT + T DSI++AR+ ARR+GA +V+ G G +DT++A A L ++ G + P P N A PL+ +PT AG G+ + LV E + + L+DPIL S+ TA ALTAL C+++ L + DA +D + G+ AE L L DG+ N +A RE L++ S+ + + AT V G L + VCA P H D+L++ Sbjct: 86 FLLQKANIPCFMFTLQRDCATIDSINQARDHARRVGANGVVAFGGGNVMDTSRAIAALMANEGNAEDLSQGP--------------LPLPNRAAPLIIMPTVAGCGSEVSNEALVLDEGAEAKLTFTKTPIIAEAVLIDPILTVSVPMGLTAQGALTALGQCIESFL-----------MNVDDAKVDEICLNGVRTAAEALAGPLKDGKLHLNDLAFRERLSLASLYSSLASAATGFGAAHSVGIGVGGLSDT-PHLQVCAAFLPLVFHRYEDILTE 336
BLAST of mRNA_Ecto-sp6_S_contig100.725.1 vs. uniprot
Match: UPI001FB2717E (iron-containing alcohol dehydrogenase n=1 Tax=Pseudodesulfovibrio tunisiensis TaxID=463192 RepID=UPI001FB2717E) HSP 1 Score: 77.8 bits (190), Expect = 1.080e-11 Identity = 71/221 (32.13%), Postives = 105/221 (47.51%), Query Frame = 1 Query: 190 LRKAGINCAMFTGRGAYPTADSIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGEGGNSKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAEDGESLTVALVDPILCTSLSKTQTAAMALTALSACVDALLAWELSLASGTPLQNGDALLDLGRRGIGAVAEGLPVALADGQNKVARELLAIGSVCAG 852 L K G+ ++ P ++ ++EA +AR IV +G G TID+AKA A L ++SG ++ G K +TP ALP+VAIPT+AG G A+ ++ + + D T+++VDP L S+ K+QTA A +A L+ AS DAL + +A LP A+ADG N AR ++A S AG Sbjct: 57 LAKQGVASLVYDKIKPNPESEQVEEAAAIARENDVNFIVGLGGGSTIDSAKAIALLAANSGQYWDYMIE---------GTGKMKTPEHPALPIVAIPTTAGTGTEADPWTVISRTGSQEKIGWGNDSTFPTLSIVDPKLMLSVPKSQTAYTGFDAFCHAAEAYLSIRRQPAS-------DAL---SLEAVHLIANTLPEAVADGSNLEARTVMAWASTAAG 258
BLAST of mRNA_Ecto-sp6_S_contig100.725.1 vs. uniprot
Match: UPI001D138907 (iron-containing alcohol dehydrogenase n=2 Tax=unclassified Arthrobacter TaxID=235627 RepID=UPI001D138907) HSP 1 Score: 77.8 bits (190), Expect = 1.170e-11 Identity = 79/251 (31.47%), Postives = 117/251 (46.61%), Query Frame = 1 Query: 118 HGRTCLAIADDNTPGQAAGRCLF-ELRKAGINCAMFTGRGAYPTADSIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGE-GGNSKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAEDGESLTVALVDPILCTSLSKTQTAAMALTALSACVDALLAWELSL--ASGTPLQNGDALL--DLGRRGIGAVAEGLPVALADGQNKVARELLAIGSVCAG 852 HG LA+ D P R L ELR G + +++ A A S+D A MAR + I++VG G T+D AK L + GG L G G N+ P G +P+VA+PT+AG G+ +V PD + V ++ A+VDP TA + AL V++ A L L +S P+ G + L +GI + LPVA+AD +N+ ARE +++G++ G Sbjct: 32 HGTRVLAVVDPFLPATKLFRTLLAELRGNGFDVTVYSDISAELPATSLDAAGTMARFLAPDAILAVGGGSTLDAAKLIG-----------LLAAHGGPLSGYYGENAVP----GPIVPIVAVPTTAGTGSEVTPVAVVSDPDLALKVGISSPFLIPVAAVVDPEFTFGAPAAVTAFSGIDALVHLVESFTAATLPLDWSSALPVFTGRNIFAETLALQGIATLGTWLPVAVADPENREAREQVSLGALLGG 267
BLAST of mRNA_Ecto-sp6_S_contig100.725.1 vs. uniprot
Match: A0A6I6JIR1_9DELT (Iron-containing alcohol dehydrogenase n=1 Tax=Pseudodesulfovibrio cashew TaxID=2678688 RepID=A0A6I6JIR1_9DELT) HSP 1 Score: 76.6 bits (187), Expect = 2.550e-11 Identity = 69/221 (31.22%), Postives = 104/221 (47.06%), Query Frame = 1 Query: 190 LRKAGINCAMFTGRGAYPTADSIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGEGGNSKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAEDGESLTVALVDPILCTSLSKTQTAAMALTALSACVDALLAWELSLASGTPLQNGDALLDLGRRGIGAVAEGLPVALADGQNKVARELLAIGSVCAG 852 L K + +F P +D +DEA ++ R G +V +G G TID+AKA A + ++ G ++ S G GG P +ALPLVAIPT+AG G A+ ++ D + D +++VDP+L S+ QTA + A +A LA T Q +L L + +A LP A+A+ +N AR ++A S AG Sbjct: 57 LAKQEVQTIVFDKIAPNPESDDVDEAAKICRETGVDFLVGLGGGSTIDSAKAIALMAANPGTYWDYMQS------GSGGGKMPER---DALPLVAIPTTAGTGTEADPWAVITRSDSAEKIGWGNDSTFPALSIVDPVLTISVPPRQTAYTGMDAFFHATEAYLA--------TCRQPASDMLAL--EAVHLIAHTLPEAVANPENLEARTVMAWASTAAG 258
BLAST of mRNA_Ecto-sp6_S_contig100.725.1 vs. uniprot
Match: A0A841L4T5_9CLOT (Alcohol dehydrogenase n=1 Tax=Anaerosolibacter carboniphilus TaxID=1417629 RepID=A0A841L4T5_9CLOT) HSP 1 Score: 76.3 bits (186), Expect = 2.900e-11 Identity = 65/221 (29.41%), Postives = 104/221 (47.06%), Query Frame = 1 Query: 187 ELRKAGINCAMFTGRGAYPTADSIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGEGGNSKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAEDGESLTVALVDPILCTSLSKTQTAAMALTALSACVDALLAWELSLASGTPLQNGDALLDLGRRGIGAVAEGLPVALADGQNKVARELLAIGSVCA 849 +L GI +F G P + +D+ R M +V +G G +D AKAAA L+ + ++L N +P G +P VAIPT+AG G+ +++HP+ LA G ++VDP+L S++ TA + AL+ V+ S T + + + I +AEGLP+A+ DG +K+AR +A+GS+ A Sbjct: 53 DLEYYGIKHYVFDGIYGEPDTEMVDQVRRMIEEEKIDFVVGLGGGSALDVAKAAAGLYGQNLPTAEYL------------NQRPFEYQG--IPFVAIPTTAGTGSEITLNAVLYHPELGNKNSLAHPGFQSKCSIVDPVLTYSMAPEITAMTGMDALTHAVE----------SYTSKMANPVTMAMAGKAISLIAEGLPMAVKDGSDKMARSKMALGSMMA 249
BLAST of mRNA_Ecto-sp6_S_contig100.725.1 vs. uniprot
Match: M1WUK9_PSEP2 (Fe-containing alcohol dehydrogenase n=1 Tax=Pseudodesulfovibrio piezophilus (strain DSM 21447 / JCM 15486 / C1TLV30) TaxID=1322246 RepID=M1WUK9_PSEP2) HSP 1 Score: 75.9 bits (185), Expect = 4.540e-11 Identity = 71/221 (32.13%), Postives = 107/221 (48.42%), Query Frame = 1 Query: 190 LRKAGINCAMFTGRGAYPTADSIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGEGGNSKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAEDGESLTVALVDPILCTSLSKTQTAAMALTALSACVDALLAWELSLASGTPLQNGDALLDLGRRGIGAVAEGLPVALADGQNKVARELLAIGSVCAG 852 L K + +F P +D IDEA + R I+ +G G TID+AKA A + +++G ++ S G GG +P++ NALP+VAIPT+AG G A+ ++ + D T+++VDP L S+ QTA + A V+A LA T Q +L L + +A LP A+A+G+N AR ++A S AG Sbjct: 57 LSKQDVQSIVFDKIMPNPESDMIDEAAAICRENDIDFIIGLGGGSTIDSAKAIALMATNTGKYWDYMQS------GTGGGEEPQS---NALPIVAIPTTAGTGTEADPWTVITKSGSAEKIGWGNDSTFPTLSIVDPALMISVPPRQTAYTGMDAFFHAVEAYLA--------TCRQPASDMLAL--EAVHLIAHTLPEAVANGENLEARTVMAWASSAAG 258 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.725.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig100.725.1 >prot_Ecto-sp6_S_contig100.725.1 ID=prot_Ecto-sp6_S_contig100.725.1|Name=mRNA_Ecto-sp6_S_contig100.725.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=429bp MRCRLASIRRNLSSRLSPNPKLIVEAECSWTKVVAQVSRHGRTCLAIADDback to top mRNA from alignment at Ecto-sp6_S_contig100:299493..304043+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig100.725.1 ID=mRNA_Ecto-sp6_S_contig100.725.1|Name=mRNA_Ecto-sp6_S_contig100.725.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4551bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:299493..304043+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:299493..304043+ >mRNA_Ecto-sp6_S_contig100.725.1 ID=mRNA_Ecto-sp6_S_contig100.725.1|Name=mRNA_Ecto-sp6_S_contig100.725.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1287bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:299493..304043+ (Ectocarpus species6 EcLAC_371)back to top |