mRNA_Ecto-sp6_S_contig100.724.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig100.724.1 vs. uniprot
Match: D7FKF2_ECTSI (Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKF2_ECTSI) HSP 1 Score: 378 bits (971), Expect = 1.340e-128 Identity = 191/192 (99.48%), Postives = 191/192 (99.48%), Query Frame = 3 Query: 72 MALISGLFHEGEAKTRLAEERRDQKYGGEQKVDSMIDLSEESIPGVLMKKIVRPGNGELPPVGSSVSVHYTGKLKDGTEFDTSAGRGPIKFALGKGEVIRGWDYAVSTMQKGERAILTVGPEYGYGGRATGPIPANATLTFEMEVMGWEMAPVFQIYQWAGLIFMIGIVIYVLFVDDEGDILRKSLESSREL 647
MALISGLFHEGEAKTRLAEERRDQKYGGEQKVDSMIDLSEESIPGVLMKKIVRPGNGELPPVGSSVSVHYTGKLKDGTEFDTSAGRGPIKFALGKGEVIRGWDYAVSTMQKGERAILTVGPEYGYGGRATGPIPANATLTFEMEVMGWE APVFQIYQWAGLIFMIGIVIYVLFVDDEGDILRKSLESSREL
Sbjct: 1 MALISGLFHEGEAKTRLAEERRDQKYGGEQKVDSMIDLSEESIPGVLMKKIVRPGNGELPPVGSSVSVHYTGKLKDGTEFDTSAGRGPIKFALGKGEVIRGWDYAVSTMQKGERAILTVGPEYGYGGRATGPIPANATLTFEMEVMGWEKAPVFQIYQWAGLIFMIGIVIYVLFVDDEGDILRKSLESSREL 192
BLAST of mRNA_Ecto-sp6_S_contig100.724.1 vs. uniprot
Match: A0A8J5XEN7_DIALT (Peptidylprolyl isomerase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XEN7_DIALT) HSP 1 Score: 129 bits (323), Expect = 5.120e-32 Identity = 61/104 (58.65%), Postives = 75/104 (72.12%), Query Frame = 3 Query: 210 LMKKIVRPGNGELPPVGSSVSVHYTGKLKDGTEFDTSAGRG-PIKFALGKGEVIRGWDYAVSTMQKGERAILTVGPEYGYGGRATGPIPANATLTFEMEVMGWE 518
L KK+ R GNG+ P GS+V+VHYTGKL DG FD+S RG P F L +G VI GWD V+TM GE+A+LT+ PE GYG RA GPIP N+TLTFE+E++ W
Sbjct: 16 LTKKVTRAGNGQRAPSGSTVNVHYTGKLADGKVFDSSRTRGQPFSFELEQGNVIAGWDRGVATMTVGEQAVLTIAPELGYGSRAVGPIPPNSTLTFEVELVSWS 119
BLAST of mRNA_Ecto-sp6_S_contig100.724.1 vs. uniprot
Match: A0A6T0HFP5_EMIHU (Peptidylprolyl isomerase n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A6T0HFP5_EMIHU) HSP 1 Score: 127 bits (320), Expect = 1.130e-31 Identity = 62/101 (61.39%), Postives = 73/101 (72.28%), Query Frame = 3 Query: 210 LMKKIVRPGNGELPPVGSSVSVHYTGKLKDGTEFDTSAGRG-PIKFALGKGEVIRGWDYAVSTMQKGERAILTVGPEYGYGGRATGPIPANATLTFEMEVM 509
L K++VR G GE P G SV VHYTG L DG+ FD+S RG PI F LG GEVI GWD VS+MQ GE A+LT+ PE+GYG GPIP NATLTFE+E++
Sbjct: 10 LTKRVVRAGTGECPSEGQSVEVHYTGSLADGSVFDSSRSRGKPIDFTLGMGEVIPGWDLGVSSMQVGEAAVLTIPPEFGYGSSGAGPIPPNATLTFEVELV 110
BLAST of mRNA_Ecto-sp6_S_contig100.724.1 vs. uniprot
Match: UPI0008F9C53F (peptidyl-prolyl cis-trans isomerase FKBP5-like n=1 Tax=Bemisia tabaci TaxID=7038 RepID=UPI0008F9C53F) HSP 1 Score: 132 bits (332), Expect = 3.670e-30 Identity = 66/116 (56.90%), Postives = 85/116 (73.28%), Query Frame = 3 Query: 177 IDLSEESIPGVLMKKIVRPGNGELPPV-GSSVSVHYTGKLKDGTEFDTSAGRGPIKFALGKGEVIRGWDYAVSTMQKGERAILTVGPEYGYGGRATGPIPANATLTFEMEVMGWEM 521
ID+S GVL K+I++PG G+L P GS+V+VHYTG L DGT+FD+S RGP F+LG+G VI+ WD V+TM+KGE LT PEY YG R TG IPAN+TL FE+E++ WE+
Sbjct: 10 IDISPAQDGGVL-KEIIKPGAGDLTPSNGSTVNVHYTGTLVDGTKFDSSRDRGPFSFSLGQGSVIKAWDIGVATMKKGEICKLTCLPEYAYGSRETGSIPANSTLIFEIEMLDWEL 124
BLAST of mRNA_Ecto-sp6_S_contig100.724.1 vs. uniprot
Match: F4PR76_CAVFA (Peptidylprolyl isomerase n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PR76_CAVFA) HSP 1 Score: 116 bits (291), Expect = 4.560e-28 Identity = 59/106 (55.66%), Postives = 76/106 (71.70%), Query Frame = 3 Query: 207 VLMKKIVRPGNGELPPVGSSVSVHYTGKLKDGTEFDTSAGRG-PIKFALGKGEVIRGWDYAVSTMQKGERAILTVGPEYGYGGRATGP-IPANATLTFEMEVMGWE 518
+L+KKI G+G PPVGSSV+VHY G+L +GT FD+S RG P F LG G+VI+GWD V+ M KGE + LT+ P+YGYG R G IP NATL FE+E++ W+
Sbjct: 5 ILIKKI---GSGVKPPVGSSVNVHYVGRLTNGTVFDSSRKRGAPFSFKLGAGQVIKGWDEGVAQMSKGETSELTISPDYGYGARGAGNVIPPNATLIFEVELIDWK 107
BLAST of mRNA_Ecto-sp6_S_contig100.724.1 vs. uniprot
Match: A0A7J7BCQ6_9COLE (Peptidylprolyl isomerase n=1 Tax=Abscondita terminalis TaxID=2069292 RepID=A0A7J7BCQ6_9COLE) HSP 1 Score: 127 bits (318), Expect = 1.190e-27 Identity = 64/116 (55.17%), Postives = 82/116 (70.69%), Query Frame = 3 Query: 177 IDLSEESIPGVLMKKIVRPGNGELPPVGSSVSVHYTGKLKDGTEFDTSAGRG-PIKFALGKGEVIRGWDYAVSTMQKGERAILTVGPEYGYGGRATGP-IPANATLTFEMEVMGWE 518
+D+S GVL K+I+ G+GE PP G V VHYTG L +GTEFD+S GRG P +F LGKG VI+ WD V+TM+KGERA LT PEY YG + P IP ++TL F++EV+GW+
Sbjct: 704 VDISPNGDGGVL-KEIITEGSGEQPPTGCKVQVHYTGTLLNGTEFDSSRGRGAPFEFDLGKGSVIKAWDIGVATMKKGERATLTCAPEYAYGKTGSPPSIPPDSTLKFDVEVLGWK 818
BLAST of mRNA_Ecto-sp6_S_contig100.724.1 vs. uniprot
Match: C1FIA7_MICCC (Peptidylprolyl isomerase n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FIA7_MICCC) HSP 1 Score: 115 bits (288), Expect = 2.020e-27 Identity = 57/108 (52.78%), Postives = 79/108 (73.15%), Query Frame = 3 Query: 204 GVLMKKIVRPGNG-ELPPVGSSVSVHYTGKLKDGTEFDTSAGRG-PIKFALGKGEVIRGWDYAVSTMQKGERAILTVGPEYGYGGR-ATGPIPANATLTFEMEVMGWE 518
G ++KK+ + G G E P G+ V+VHY G L+DGT+FD+S RG PI+F LG G+VI+GWD V++M+KGE+A LT+ PEYGYG A G IP ATL F++E++ W+
Sbjct: 15 GGVVKKVTKDGEGTERPGKGAEVAVHYVGTLEDGTKFDSSVDRGEPIRFTLGVGQVIKGWDLGVASMRKGEKATLTIKPEYGYGDAGAGGVIPGGATLLFDVELVEWK 122
BLAST of mRNA_Ecto-sp6_S_contig100.724.1 vs. uniprot
Match: A0A0C9S0Q4_AMBAM (Peptidylprolyl isomerase (Fragment) n=1 Tax=Amblyomma americanum TaxID=6943 RepID=A0A0C9S0Q4_AMBAM) HSP 1 Score: 115 bits (289), Expect = 2.680e-27 Identity = 57/106 (53.77%), Postives = 76/106 (71.70%), Query Frame = 3 Query: 210 LMKKIVRPGNGELPPV-GSSVSVHYTGKLKDGTEFDTSAGRGPIKFALGKGEVIRGWDYAVSTMQKGERAILTVGPEYGYGGRATGP-IPANATLTFEMEVMGWEM 521
++K+IVR G G+ P+ G+SVSVHYTGKL DGTEFD+S RG F LG G VI+ W+ + TM+KGE AI T +YGYG + + P IP NATL FE+E++ W++
Sbjct: 2 VLKEIVRAGTGDETPLDGNSVSVHYTGKLLDGTEFDSSRKRGKFDFTLGNGSVIKAWEIGIKTMKKGEVAIFTCQSDYGYGVQGSPPKIPPNATLIFEVELLDWKL 107
BLAST of mRNA_Ecto-sp6_S_contig100.724.1 vs. uniprot
Match: E4WYV9_OIKDI (Peptidylprolyl isomerase n=1 Tax=Oikopleura dioica TaxID=34765 RepID=E4WYV9_OIKDI) HSP 1 Score: 114 bits (284), Expect = 4.570e-27 Identity = 53/100 (53.00%), Postives = 74/100 (74.00%), Query Frame = 3 Query: 225 VRPGNGELPPVGSSVSVHYTGKLKDGTEFDTSAGRG-PIKFALGKGEVIRGWDYAVSTMQKGERAILTVGPEYGYGGRA-TGPIPANATLTFEMEVMGWE 518
++ GNG++PP GS V VHYTG L DG++FD+S RG P +F LG+G+VI+GWD V+ M G+RA LT P+Y YG R G IPAN+TL F++E++G++
Sbjct: 8 MKEGNGQIPPAGSKVQVHYTGTLTDGSKFDSSRDRGKPFEFVLGQGQVIKGWDEGVAQMSIGQRAKLTCSPDYAYGSRGFPGLIPANSTLVFDVELLGFK 107
BLAST of mRNA_Ecto-sp6_S_contig100.724.1 vs. uniprot
Match: A0A7J9BZP9_GOSGO (Peptidylprolyl isomerase (Fragment) n=1 Tax=Gossypium gossypioides TaxID=34282 RepID=A0A7J9BZP9_GOSGO) HSP 1 Score: 115 bits (287), Expect = 1.140e-26 Identity = 58/105 (55.24%), Postives = 73/105 (69.52%), Query Frame = 3 Query: 210 LMKKIVRPGNG-ELPPVGSSVSVHYTGKLKDGTEFDTSAGRG-PIKFALGKGEVIRGWDYAVSTMQKGERAILTVGPEYGYGGRATGP-IPANATLTFEMEVMGW 515
L KK+V+ G G E P G V VHYTG L DGT+FD+S RG P KFALG+G+VI+GWD + TM+KGE AI T+ PE YG + P IP NATL F++E++ W
Sbjct: 37 LKKKLVKEGEGWENPETGDEVEVHYTGTLLDGTKFDSSRDRGTPFKFALGQGQVIKGWDEGIKTMKKGENAIFTIPPELAYGESGSPPTIPPNATLQFDVELLSW 141 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.724.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig100.724.1 >prot_Ecto-sp6_S_contig100.724.1 ID=prot_Ecto-sp6_S_contig100.724.1|Name=mRNA_Ecto-sp6_S_contig100.724.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=193bp MALISGLFHEGEAKTRLAEERRDQKYGGEQKVDSMIDLSEESIPGVLMKKback to top mRNA from alignment at Ecto-sp6_S_contig100:294985..298101+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig100.724.1 ID=mRNA_Ecto-sp6_S_contig100.724.1|Name=mRNA_Ecto-sp6_S_contig100.724.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3117bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:294985..298101+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:294985..298101+ >mRNA_Ecto-sp6_S_contig100.724.1 ID=mRNA_Ecto-sp6_S_contig100.724.1|Name=mRNA_Ecto-sp6_S_contig100.724.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=579bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:294985..298101+ (Ectocarpus species6 EcLAC_371)back to top |