mRNA_Ecto-sp6_S_contig100.723.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig100.723.1 vs. uniprot
Match: D7FKF3_ECTSI (HSCB_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKF3_ECTSI) HSP 1 Score: 600 bits (1547), Expect = 1.750e-213 Identity = 305/315 (96.83%), Postives = 308/315 (97.78%), Query Frame = 2 Query: 32 MSLVRHLPSIGPAWRTLAGTRRYVDGELLPPQPLLQSSYAAFSRQPSIQHVLPSPPSRRSHSVLRRCVRPGGAPGTTIALNEHASRKRLLKGRRLSTQKTGDVNNNSNNCWKCGSEISWREHFCKCGVIQLLDERLDYFELFQCTPSVFLGLKEVEMRFKNMQRAFHPDLYASKSEDEREISAANSATANKAYQTLVQPMARVKYLMRLLGSTALEEEGEDDRTSVPMDFLMEVMETREALEECSSKEEAEAILSETSVAVEECLSGMDEVLKAGGGKDELSDAAVRLRYLYRIEDEARRVMHRLEDGLASPTAG 976 MS VRHLPSI PAWRTLAGTRRYVDGELLPP+ LLQSSYAAFSRQPSIQHVLPSPPSRRSHSVLRRCVRPG APGT+IALNEHASRKRLL+GRRLSTQKTGDVNNNSNNCWKCG E SWREHFCKCGVIQLLDERLDYFELFQCTPSVFLGLKEVEMRFKNMQRAFHPDLYASKSEDEREISAANSATANKAYQTLVQPMARVKYLMRLLGSTALEEEGEDDRTSVPMDFLMEVMETREALE CSSKEEAEAILSETSVAVEECLSGMDEVLKAGGGKDELSDAAVRLRYLYRIEDEARRVMHRLEDGLASPTAG Sbjct: 1 MSFVRHLPSIRPAWRTLAGTRRYVDGELLPPKQLLQSSYAAFSRQPSIQHVLPSPPSRRSHSVLRRCVRPGDAPGTSIALNEHASRKRLLEGRRLSTQKTGDVNNNSNNCWKCGLETSWREHFCKCGVIQLLDERLDYFELFQCTPSVFLGLKEVEMRFKNMQRAFHPDLYASKSEDEREISAANSATANKAYQTLVQPMARVKYLMRLLGSTALEEEGEDDRTSVPMDFLMEVMETREALEGCSSKEEAEAILSETSVAVEECLSGMDEVLKAGGGKDELSDAAVRLRYLYRIEDEARRVMHRLEDGLASPTAG 315
BLAST of mRNA_Ecto-sp6_S_contig100.723.1 vs. uniprot
Match: A0A7S2ST46_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2ST46_9STRA) HSP 1 Score: 141 bits (355), Expect = 4.550e-35 Identity = 80/203 (39.41%), Postives = 116/203 (57.14%), Query Frame = 2 Query: 359 CWKCGSEISWREHFCKCGVIQLLDERLDYFELFQCTPSVFLGLKEVEMRFKNMQRAFHPDLYASKSEDEREISAANSATANKAYQTLVQPMARVKYLMRLLGSTALEEEGEDDRTSVPMDFLMEVMETREALEECSSKEEAEAILSETSVAVEECLSGMDEVLKA---GGGKDELSDAAVRLRYLYRIEDEARRVMHRLEDGL 958 CWKCG ++ + FC C VIQ +D YF++F+ ++ L K++E +FK +QR HPDLY SE E+EISA NSA N+AYQTL P+ R+KYL+ G L E+G T LME+ME R+ ++EC S +L E ++ LS + +K G ++ LS AA+RL+Y +IE+ A RL + + Sbjct: 38 CWKCGKKLRCCQLFCPCSVIQPVDNACSYFDIFKLDAAIELNQKDLEAQFKALQRQLHPDLYTRNSEREQEISAQNSALVNRAYQTLRDPLERIKYLLEQQGILTLTEQG---GTISDPSLLMEIMEIRQQIDECVSP----VVLDELRLSNRTKLSTLLSEIKRHHQDGHREALSQAAIRLQYYAKIEESAEAASERLAEAI 233
BLAST of mRNA_Ecto-sp6_S_contig100.723.1 vs. uniprot
Match: A0A836CIW0_9STRA (J domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIW0_9STRA) HSP 1 Score: 130 bits (326), Expect = 1.410e-30 Identity = 82/205 (40.00%), Postives = 120/205 (58.54%), Query Frame = 2 Query: 359 CWKCGSEISWREHFCKCGVIQLLDER-LDYFELFQCTPSVFLGLKEVEMRFKNMQRAFHPDLYASKSEDEREISAANSATANKAYQTLVQPMARVKYLMRLL-GSTALEEEGEDDRTSVPMD--FLMEVMETREALEECSSKEEAEAILSETSVAVEECLSGMDEVLKAGGGKDELSDAAVRLRYLYRIEDEARRVMHRLEDGLA 961 C CG+ +S FC+CG +Q L + YFEL C V + K VE RF +Q+ HPDL+A KS++E+ ISAAN+A N+AYQTL P+ RV+Y+++L+ G E +R++ P D LM V +TRE LE C+S++EA +L + +++ LS + + A G + RL+YL +I +EA V HRL D A Sbjct: 90 CGSCGAPVSKVGLFCECGRMQPLSHSAISYFELLDCPFGVIIDPKLVERRFWALQKQLHPDLHAVKSQEEQAISAANTAFVNQAYQTLRDPVKRVRYVLQLMKGQDEAEAAAHAERSATPPDPALLMFVYDTRERLERCASEQEARYVLRDAEQSMDAQLSELRGEV-AAGDVAAVERGLNRLQYLAKIAEEACSVEHRLADAAA 293
BLAST of mRNA_Ecto-sp6_S_contig100.723.1 vs. uniprot
Match: A0A7S3Y1H3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1H3_HETAK) HSP 1 Score: 121 bits (303), Expect = 1.080e-27 Identity = 71/197 (36.04%), Postives = 110/197 (55.84%), Query Frame = 2 Query: 359 CWKCGSEISWREHFCKCGVIQLLDERLDYFELFQCTPSVFLGLKEVEMRFKNMQRAFHPDLYASKSEDEREISAANSATANKAYQTLVQPMARVKYLMRLLGSTALEEEGEDDRTSVPMDFLMEVMETREALEECSSKEEAEAILSETSVAVEECLSGMDEVLKAGGGKDELSDAAVRLRYLYRIEDEARRVMHRLE 949 CW+CG FC CG +Q L +YFE+ +C + +K +E + +Q+ HPDLY ++ + E+E+SA NS+ N AYQTL P+ RVKYL+ L G L E+ PM FLM+VME RE +EE + + E ++ A+++ L + + L G ++++ AV+L+Y RI EA + + LE Sbjct: 68 CWQCGLRDRCSGFFCDCGALQPLQNE-NYFEILKCPVHFDVDMKYLEQNYWKLQKQLHPDLYGTRHQIEQELSAQNSSQVNHAYQTLKDPVERVKYLLSLYGIEVLHEQSGTQEVD-PM-FLMQVMEMREEIEEAKTPHKIEQLMQTNHHAIDQTLRSI-KTLFDGKELTKIAEEAVKLQYYTRINAEACQKLDELE 260
BLAST of mRNA_Ecto-sp6_S_contig100.723.1 vs. uniprot
Match: A0A485KZX6_9STRA (Aste57867_14105 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KZX6_9STRA) HSP 1 Score: 118 bits (296), Expect = 3.020e-27 Identity = 74/201 (36.82%), Postives = 104/201 (51.74%), Query Frame = 2 Query: 359 CWKCGSEISWREHFC-KCGVIQLLDER--LDYFELFQCTPSVFLGLKEVEMRFKNMQRAFHPDLYASKSEDEREISAANSATANKAYQTLVQPMARVKYLMRLLGSTALEEEGEDDRTSVPMDFLMEVMETREALEECSSKEEAEAILSETSVAVEECLSGMDEVLKAGGGKDELSDAAVRLRYLYRIEDEARRVMHRLED 952 CWKCGSE E FC KC IQ L +YF++F S + K+VE + +Q+ HPDLY SKS+ E+E+S NSA N+AY L P +R Y++ L G AL E + T V LME+ME REA+EEC++ E +E + + C+ + E L + V L+YL ++ D LE+ Sbjct: 16 CWKCGSETGCCEFFCAKCSHIQPLQAEGACNYFKIFGIPESFEINAKKVEKLYWALQKKMHPDLYGSKSQTEKEMSIVNSALVNQAYNLLKAPTSRANYMLHLHGIDALGE----NSTFVDPAVLMEIMEAREAVEECTTVEGLIPHKTENAKQINRCIKQLTEALDTHEDFEASKKLTVELQYLVKLSDAILEKEEALEE 212
BLAST of mRNA_Ecto-sp6_S_contig100.723.1 vs. uniprot
Match: A0A3M6VU17_9STRA (J domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VU17_9STRA) HSP 1 Score: 119 bits (297), Expect = 5.110e-27 Identity = 73/192 (38.02%), Postives = 104/192 (54.17%), Query Frame = 2 Query: 356 NCWKCGSEISWREHFCK-CGVIQLLDERL--DYFELFQCTPSVFLGLKEVEMRFKNMQRAFHPDLYASKSEDEREISAANSATANKAYQTLVQPMARVKYLMRLLGSTALEEEGEDDRTSVPMDFLMEVMETREALEECSSKEEAEAILSETSVAVEECLSGMDEVLKAGGGKDELSDAAVRLRYLYRIEDE 922 NCWKC FCK C IQ + + DYFE+FQ + L L+ +E + N+Q+ HPDLY SKSE E+E+SA N+A N AY+ L P RVKYL+ L G AL GE T+V + LM+ ME RE + E E + I E S ++ ++ + EV + + AV+L+Y+ + +E Sbjct: 48 NCWKCHHVTDCCSFFCKTCNAIQPISKNCHCDYFEMFQIPKNFNLELRTIEKTYWNLQKRLHPDLYGSKSEFEKELSAVNAAVINDAYKMLKTPNTRVKYLLTLHGIDAL---GETASTAVDPELLMQTMEIRERIAEAPDVGELDKIRKEISDHIDAVINKLGEVYDRDEDLESTKEYAVQLQYMVKCVEE 236
BLAST of mRNA_Ecto-sp6_S_contig100.723.1 vs. uniprot
Match: K3WYH3_GLOUD (J domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WYH3_GLOUD) HSP 1 Score: 118 bits (295), Expect = 7.270e-27 Identity = 72/200 (36.00%), Postives = 104/200 (52.00%), Query Frame = 2 Query: 359 CWKCGSEISWREHFCK-CGVIQLL--DERLDYFELFQCTPSVFLGLKEVEMRFKNMQRAFHPDLYASKSEDEREISAANSATANKAYQTLVQPMARVKYLMRLLGSTALEEEGEDDRTSVPMDFLMEVMETREALEECSSKEEAEAILSETSVAVEECLSGMDEVLKAGGGKDELSDAAVRLRYLYRIEDEARRVMHRLE 949 CW C FCK CG IQ L D DYFE+F+ + L +++E + N+Q+ HPDLY SKSE E+E+SA N+A N AY L P RVKYL+ L G AL GE T+V LM+ ME RE ++E + E + + + S ++ ++ + +V D AV L+Y+ + +E +LE Sbjct: 34 CWNCHHATDCCSFFCKSCGTIQPLNKDNHCDYFEMFKIPKNFTLEQRKIEQTYWNLQKRLHPDLYGSKSEFEKELSAVNAAVINDAYNMLKTPNTRVKYLLALHGIDAL---GESASTAVDPQLLMQTMEIREEIDEAETIEALDTLRKQISEQIDAIITKLGQVYDKQQDLDATKKYAVELQYMVKCAEEIDAKEEKLE 230
BLAST of mRNA_Ecto-sp6_S_contig100.723.1 vs. uniprot
Match: A0A433U8R5_ELYCH (J domain-containing protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A433U8R5_ELYCH) HSP 1 Score: 117 bits (292), Expect = 7.080e-26 Identity = 68/200 (34.00%), Postives = 111/200 (55.50%), Query Frame = 2 Query: 350 SNNCWKCGSEISWREH--FCKCGVIQLLDERLDYFELFQCTPSVFLGLKEVEMRFKNMQRAFHPDLYASKSEDEREISAANSATANKAYQTLVQPMARVKYLMRLLGSTALEEEGEDDRTSVPMDFLMEVMETREALEECSSKEEAEAILSETSVAVEECLSGMDEVLKAGGGKDELSDAAVRLRYLYRIEDEARRVMHR 943 S CWKCGS+ + FCKCGV+Q + + YF L + L K + + F+ Q+ HPD+++SKS++E++ + S+ NKAYQTL++P++R Y++RL T E+ D S P DFLM++M E ++E S E +I VA+E C+ + + K+ +D S + ++LRY I++ + R Sbjct: 97 SRTCWKCGSDTDPEKELFFCKCGVVQTIAPSITYFRLLDEEVTFDLDTKTLGVVFRKTQKLLHPDMFSSKSKEEQQFAEEQSSLLNKAYQTLLKPLSRAIYMLRLHNVTIDEK----DTISDP-DFLMDIMTFNEQIDEASCASEFNSIEETIGVAIEMCIKEISQAFKSCNIEDAKS-STIKLRYFTTIQERILNIRRR 290
BLAST of mRNA_Ecto-sp6_S_contig100.723.1 vs. uniprot
Match: D0N1H2_PHYIT (J domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=D0N1H2_PHYIT) HSP 1 Score: 115 bits (287), Expect = 1.320e-25 Identity = 70/191 (36.65%), Postives = 101/191 (52.88%), Query Frame = 2 Query: 359 CWKCGSEISWREHFCK-CGVIQLLDE--RLDYFELFQCTPSVFLGLKEVEMRFKNMQRAFHPDLYASKSEDEREISAANSATANKAYQTLVQPMARVKYLMRLLGSTALEEEGEDDRTSVPMDFLMEVMETREALEECSSKEEAEAILSETSVAVEECLSGMDEVLKAGGGKDELSDAAVRLRYLYRIEDE 922 CWKC FCK C IQ +D+ DYFE+F+ + L + +E + N+Q+ HPDLY SKSE E+E+SA N+A N AY+ L +P RVKYL+ L G AL GE T+V + LM+ ME RE + E + I E S ++ ++ + EV + AV L+Y+ + +E Sbjct: 49 CWKCHHATDCCSFFCKSCNAIQPIDKGCHCDYFEMFKVPKNFNLEQRSIEKTYWNLQKRLHPDLYGSKSEFEKELSAVNAAVINDAYKMLKKPNTRVKYLLALHGIDAL---GETASTAVDPELLMQTMEIRERIAEALDVDTLHEIRKEVSEHIDTIINKLGEVYDKDQDLESTKQYAVELQYMVKCAEE 236
BLAST of mRNA_Ecto-sp6_S_contig100.723.1 vs. uniprot
Match: A0A5D6XKG7_9STRA (J domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XKG7_9STRA) HSP 1 Score: 112 bits (279), Expect = 1.380e-24 Identity = 72/204 (35.29%), Postives = 103/204 (50.49%), Query Frame = 2 Query: 347 NSNNCWKCGSEISWREHFCK-CGVIQLLDER--LDYFELFQCTPSVFLGLKEVEMRFKNMQRAFHPDLYASKSEDEREISAANSATANKAYQTLVQPMARVKYLMRLLGSTALEEEGEDDRTSVPMDFLMEVMETREALEECSSKEEAEAILSETSVAVEECLSGMDEVLKAGGGKDELSDAAVRLRYLYRIEDEARRVMHRLE 949 N +CWKC FC+ C IQ L+ DYFE+F+ + L +++E + N+Q+ HPDLY SKSE E+E+SA N+A N AY L P RVKYL+ L G AL GE T+V LM ME RE ++E S E + I + ++ + + EV D A+ L+Y+ + +E +LE Sbjct: 37 NEKDCWKCHHATECCALFCQSCDAIQPLNRENACDYFEMFKIPKNFSLEQRKIEQTYWNLQKRLHPDLYGSKSEFEKELSATNAAVVNDAYNMLKTPNTRVKYLLALHGIDAL---GESASTAVDPALLMRTMEIREEIDEAPSVEALDRIRKNIAAQIDAIIQKLGEVYDRKHDLDATKRFALELQYMVKCAEEIDLREEKLE 237 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.723.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig100.723.1 >prot_Ecto-sp6_S_contig100.723.1 ID=prot_Ecto-sp6_S_contig100.723.1|Name=mRNA_Ecto-sp6_S_contig100.723.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=316bp MSLVRHLPSIGPAWRTLAGTRRYVDGELLPPQPLLQSSYAAFSRQPSIQHback to top mRNA from alignment at Ecto-sp6_S_contig100:292651..294851- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig100.723.1 ID=mRNA_Ecto-sp6_S_contig100.723.1|Name=mRNA_Ecto-sp6_S_contig100.723.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=2201bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:292651..294851- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:292651..294851- >mRNA_Ecto-sp6_S_contig100.723.1 ID=mRNA_Ecto-sp6_S_contig100.723.1|Name=mRNA_Ecto-sp6_S_contig100.723.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=948bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:292651..294851- (Ectocarpus species6 EcLAC_371)back to top |