mRNA_Ecto-sp6_S_contig100.717.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig100.717.1 vs. uniprot
Match: D7FKF9_ECTSI (MI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKF9_ECTSI) HSP 1 Score: 965 bits (2495), Expect = 0.000e+0 Identity = 530/544 (97.43%), Postives = 532/544 (97.79%), Query Frame = 1 Query: 1 MQKDAETMGKATKEYQRIAWEALRKSINGLINKATPGGLSITLQVNTTNIKMIAPELFQLNLVRGRGLFARAVMKAQLASPGFTPVFAALVAVVNTKLPENGELILKRVIVAFRRAYKRRDKVVATALAKFIAHMVNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIGQVLQELSPQGLHAVFERFRGILHEGQIDKRVQYTIETLFAIRKSGFSDHPAVPPELDLVERDDQITFEVGLEDKLEKEEMLDIFRMDEKYEENEDMWAKIKGEILGESDXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPQMTQQIQDLTEQDLVNLRRTIYLTIMSSAGFEECAHKLTKLDIQEGYEMELCNMMIECCSQERTWRSFYGLIGQRFCMMHRRWQAAFTECFETNYNTIHRLETNKLRNVAKFFAHLLYTDALPWTCLESIRLSEDATTSSSRIFIKILVLELSENMGLKNLRERYNDPYMAEVFQGMFPTDNPRNTRFAINFFTAIGLGGLTDGLRLHLKNAPKMIMEAQLAAAEADDGSSS 1632 MQKDAETMGKATKEYQRIAWEALRKSINGLINK VNTTNIKMIAPELFQLNLVRGRGLFARAVMKAQLASPGFTPVFAALVAVVNTKLPENGELILKRVIVAFRRAYKRRDKVVATALAKFIAHMVNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIGQVLQELSPQGLHAVFERFRGILHEGQIDKRVQYTIETLFAIRKSGFSDHPAVPPELDLVERDDQITFE+GLEDKLEKEEMLDIFRMDEKYEENEDMWAKIKGEILGESDXXXXXXXXXXXXXXXXXXXXXXXXXXXX PQMTQ+IQDLTEQDLVNLRRTIYLTIMSSAGFEECAHKLTKLDIQEGYEMELCNMMIECCSQERTWRSFYGLIGQRFCMMHRRWQAAFTECFETNYNTIHRLETNKLRNVAKFFAHLLYTDALPWTCLESIRLSEDATTSSSRIFIKILVLELSENMGLKNLRERYNDPYMAEVFQGMFPTDNPRNTRFAINFFTAIGLGGLTDGLRLHLKNAPKMIMEAQLAAAEADDGSSS Sbjct: 1 MQKDAETMGKATKEYQRIAWEALRKSINGLINK-----------VNTTNIKMIAPELFQLNLVRGRGLFARAVMKAQLASPGFTPVFAALVAVVNTKLPENGELILKRVIVAFRRAYKRRDKVVATALAKFIAHMVNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIGQVLQELSPQGLHAVFERFRGILHEGQIDKRVQYTIETLFAIRKSGFSDHPAVPPELDLVERDDQITFEIGLEDKLEKEEMLDIFRMDEKYEENEDMWAKIKGEILGESDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQMTQEIQDLTEQDLVNLRRTIYLTIMSSAGFEECAHKLTKLDIQEGYEMELCNMMIECCSQERTWRSFYGLIGQRFCMMHRRWQAAFTECFETNYNTIHRLETNKLRNVAKFFAHLLYTDALPWTCLESIRLSEDATTSSSRIFIKILVLELSENMGLKNLRERYNDPYMAEVFQGMFPTDNPRNTRFAINFFTAIGLGGLTDGLRLHLKNAPKMIMEAQLAAAEADDGSSS 533
BLAST of mRNA_Ecto-sp6_S_contig100.717.1 vs. uniprot
Match: A0A835ZAM0_9STRA (MI domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAM0_9STRA) HSP 1 Score: 749 bits (1934), Expect = 9.220e-259 Identity = 416/539 (77.18%), Postives = 461/539 (85.53%), Query Frame = 1 Query: 1 MQKDAETMGKATKEYQRIAWEALRKSINGLINKATPGGLSITLQVNTTNIKMIAPELFQLNLVRGRGLFARAVMKAQLASPGFTPVFAALVAVVNTKLPENGELILKRVIVAFRRAYKRRDKVVATALAKFIAHMVNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIGQVLQELSPQGLHAVFERFRGILHEGQIDKRVQYTIETLFAIRKSGFSDHPAVPPELDLVERDDQITFEVGLEDKLEKEEMLDIFRMDEKYEENEDMWAKIKGEILGESDXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPQMTQQ--------IQDLTEQDLVNLRRTIYLTIMSSAGFEECAHKLTKLDIQEGYEMELCNMMIECCSQERTWRSFYGLIGQRFCMMHRRWQAAFTECFETNYNTIHRLETNKLRNVAKFFAHLLYTDALPWTCLESIRLSEDATTSSSRIFIKILVLELSENMGLKNLRERYNDPYMAEVFQGMFPTDNPRNTRFAINFFTAIGLGGLTDGLRLHLKNAPKMIMEA 1593 M+K+ + + K+++EYQR AWEALRKSINGLINK VN N+K I PELF+LNLVRGRGLFARA+MK+QLASPGFTPVFAA+VAVVNTKLPENGELILKRVIVAFRRA+KRRDK+VATALAKFIAH+VNQQVAHELLALQLLTVLLE PTDDSVEIAV FT+EIGQ+L E+SPQGLHAVFERFRGIL EG IDKRVQYT+E LFA RK GF+D PAVP ELDLVER+DQITFE+GL+D+L K+E+LD+FRMD+KYEENE MWA I+ EILGE+D XXXXXXXXXXXXXXXXXXXXXXXXXXX I DLTEQDLVNLRRTIYLTIMSS G+EE HKL KLDIQ+GYE ELCNM+ ECCSQER++ S+YGLI QRFCM+HRRWQ AF + F NY TIHRLETNKLRNVAK F+HLLYTDALPWTCLE+IRL+ED TTSSSRIFIKIL ELSENMGL LR+R+ DPYMA+ F GMFP DNPRNTRFAINFFT+IGLGGLTD LR HLKNAPK IM A Sbjct: 132 MRKNVDALDKSSREYQRTAWEALRKSINGLINK-----------VNAANVKNIIPELFELNLVRGRGLFARAIMKSQLASPGFTPVFAAVVAVVNTKLPENGELILKRVIVAFRRAFKRRDKIVATALAKFIAHLVNQQVAHELLALQLLTVLLENPTDDSVEIAVGFTREIGQLLMEVSPQGLHAVFERFRGILQEGVIDKRVQYTVEGLFATRKGGFADFPAVPKELDLVEREDQITFELGLDDELTKDEVLDVFRMDDKYEENEAMWAAIRAEILGENDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVVIHDLTEQDLVNLRRTIYLTIMSSVGYEEACHKLAKLDIQQGYESELCNMLTECCSQERSYLSYYGLIAQRFCMLHRRWQEAFEDAFGQNYATIHRLETNKLRNVAKLFSHLLYTDALPWTCLEAIRLNEDETTSSSRIFIKILCQELSENMGLATLRQRFADPYMADTFGGMFPKDNPRNTRFAINFFTSIGLGGLTDDLRAHLKNAPKQIMAA 659
BLAST of mRNA_Ecto-sp6_S_contig100.717.1 vs. uniprot
Match: A0A7S2MJ10_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MJ10_9STRA) HSP 1 Score: 714 bits (1844), Expect = 3.690e-249 Identity = 376/550 (68.36%), Postives = 446/550 (81.09%), Query Frame = 1 Query: 1 MQKDAETMGKATKEYQRIAWEALRKSINGLINKATPGGLSITLQVNTTNIKMIAPELFQLNLVRGRGLFARAVMKAQLASPGFTPVFAALVAVVNTKLPENGELILKRVIVAFRRAYKRRDKVVATALAKFIAHMVNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIGQVLQELSPQGLHAVFERFRGILHEGQIDKRVQYTIETLFAIRKSGFSDHPAVPPELDLVERDDQITFEVGLEDKLEKEEMLDIFRMDEKYEENEDMWAKIKGEILGE---SDXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPQMTQQIQDLTEQDLVNLRRTIYLTIMSSAGFEECAHKLTKLDIQEGYEMELCNMMIECCSQERTWRSFYGLIGQRFCMMHRRWQAAFTECFETNYNTIHRLETNKLRNVAKFFAHLLYTDALPWTCLESIRLSEDATTSSSRIFIKILVLELSENMGLKNLRERYNDPYMAEVFQGMFPTD-NPRNTRFAINFFTAIGLGGLTDGLRLHLKNAPKMIMEAQ--LAAAEADDGSSS 1632 MQK+ M K +KE+QR+ WE LRK INGL+NK VN NIKM+ PE F+LNL+RGRGL ARA+MKAQLASPGFT ++AALVAV+NTKLPENGELI+KRVIV FRRAYKRRDKVVATA KFI H++NQQV+HEL+ALQLLT+LLE+PTDDSVEIAVNFTKE+GQVL++LSP+GLHA+FERFRGILHEG+IDKRVQYTIE LFA+R+SGF D PAV PELDLV+R DQI+FE+GLEDKL+K+E+LD+F++DE++EENE++W I+GEILGE +D XXXXXXXXXXX P T I+D+TEQDL+NLRRT+YLTIMS+ GFEECAHKL KL+I EG+EMELCNM+IECCSQERT+ +YGL+GQRF +M RRW F + FE Y IHRLETNKLRNVAKFFAHLL TD+LPWTCLE I L+E+ TTSSSRIFIKIL ELSEN+G+ L+ R+NDPYM +VF G+FP D NPRNTRFAIN++T+IGLG LTD LR HLK+APK + E Q LA +A G S Sbjct: 89 MQKEMSKMNKTSKEFQRLKWEKLRKGINGLVNK-----------VNVANIKMLIPEFFELNLIRGRGLLARAIMKAQLASPGFTHIYAALVAVLNTKLPENGELIMKRVIVGFRRAYKRRDKVVATAFIKFIGHLINQQVSHELIALQLLTILLEDPTDDSVEIAVNFTKEVGQVLEQLSPRGLHAIFERFRGILHEGEIDKRVQYTIEGLFAVRRSGFEDFPAVLPELDLVDRSDQISFELGLEDKLDKQELLDVFKVDEEFEENENLWKTIRGEILGEDSDADDESGSXXXXXXXXXXXEEAAWDGPTGIKGPATT-DIRDMTEQDLINLRRTVYLTIMSAVGFEECAHKLAKLEIPEGHEMELCNMLIECCSQERTYLRYYGLLGQRFSLMDRRWSETFDKAFEDQYAMIHRLETNKLRNVAKFFAHLLQTDSLPWTCLEYIHLNEEETTSSSRIFIKILAQELSENLGIAKLKARFNDPYMMQVFSGIFPMDDNPRNTRFAINYWTSIGLGALTDSLRQHLKDAPKRLREQQMQLARQQASRGHRS 626
BLAST of mRNA_Ecto-sp6_S_contig100.717.1 vs. uniprot
Match: A0A7S2WT31_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WT31_9STRA) HSP 1 Score: 706 bits (1821), Expect = 2.790e-244 Identity = 382/546 (69.96%), Postives = 446/546 (81.68%), Query Frame = 1 Query: 1 MQKDAETMGKATKEYQRIAWEALRKSINGLINKATPGGLSITLQVNTTNIKMIAPELFQLNLVRGRGLFARAVMKAQLASPGFTPVFAALVAVVNTKLPENGELILKRVIVAFRRAYKRRDKVVATALAKFIAHMVNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIGQVLQELSPQGLHAVFERFRGILHEGQIDKRVQYTIETLFAIRKSGFSDHPAVPPELDLVERDDQITFEVGLEDKLEKEEMLDIFRMDEKYEENEDMWAKIKGEILGESDXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ----------PQMTQQIQDLTEQDLVNLRRTIYLTIMSSAGFEECAHKLTKLDIQEGYEMELCNMMIECCSQERTWRSFYGLIGQRFCMMHRRWQAAFTECFETNYNTIHRLETNKLRNVAKFFAHLLYTDALPWTCLESIRLSEDATTSSSRIFIKILVLELSENMGLKNLRERYNDPYMAEVFQGMFPTDNPRNTRFAINFFTAIGLGGLTDGLRLHLKNAPKMIMEAQLAAA 1608 MQK+ M KA+KEYQR+ WE LRK INGL+NK VN NIK I PELF+LNLVRG+GL ARAVMKAQLASPGFT +++ALVAV+NTKLPENGELI+KRVIV FRRAYKRRDKVVATA AKFIAH+VN QVAHELLALQLLTVLLEEPTDDSVEIAVNFTKE+GQ+L++LSP+GLHA+FERFRGILHEG+IDKRVQYTIE LFA+RKS FSD AVP ELDLV+R+DQITFE GL+DKL+K+E+LD+FR ++ YE+NE MW ++ EILGESD XXXXXXXXXXXXXXXXXXXX + +I+DLTEQDL+NLRRTIYLTIMSS GFEECAHKL +L+I G+EMELCNM+IECCSQERT+ +YGL+ QRFC+M RRW F F Y IHRLETNKLRNVAK FAHL+ TDA+PWTC E IRL+E+ TTSSSRIF+KILV E+SE +G+ L+ R++DPYM +VF G+FP +NPR+TRFAIN++T+IGLG LTDGLR HLK+APK + E QLA A Sbjct: 184 MQKEMAKMDKASKEYQRLKWEQLRKGINGLVNK-----------VNVANIKDIIPELFELNLVRGKGLLARAVMKAQLASPGFTHIYSALVAVLNTKLPENGELIVKRVIVGFRRAYKRRDKVVATAFAKFIAHLVNHQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEVGQLLEQLSPRGLHAIFERFRGILHEGEIDKRVQYTIEGLFAVRKSNFSDFLAVPDELDLVDRNDQITFEFGLDDKLDKQELLDVFRAEKDYEQNERMWKSLRAEILGESDDGSDAXXXXXXXXXXXXXXXXXXXXERGAVGGWGGPSGLEEKRTEIEDLTEQDLINLRRTIYLTIMSSVGFEECAHKLARLNIPPGHEMELCNMLIECCSQERTYLRYYGLLAQRFCLMERRWTGTFDRGFSEQYTMIHRLETNKLRNVAKLFAHLVVTDAIPWTCFEYIRLNEEETTSSSRIFVKILVQEVSEAIGIAKLKSRFSDPYMGQVFAGLFPKENPRDTRFAINYWTSIGLGALTDGLRQHLKDAPKRLREQQLALA 718
BLAST of mRNA_Ecto-sp6_S_contig100.717.1 vs. uniprot
Match: A0A8J2SIE4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SIE4_9STRA) HSP 1 Score: 686 bits (1771), Expect = 3.360e-238 Identity = 376/561 (67.02%), Postives = 440/561 (78.43%), Query Frame = 1 Query: 28 KATKEYQRIAWEALRKSINGLINKATPGGLSITLQVNTTNIKMIAPELFQLNLVRGRGLFARAVMKAQLASPGFTPVFAALVAVVNTKLPENGELILKRVIVAFRRAYKRRDKVVATALAKFIAHMVNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIGQVLQELSPQGLHAVFERFRGILHEGQ---------------------------IDKRVQYTIETLFAIRKSGFSDHPAVPPELDLVERDDQITFEVGLEDKLEKEEMLDIFRMDEKYEENEDMWAKIKGEILGESDXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPQMTQQIQDLTEQDLVNLRRTIYLTIMSSAGFEECAHKLTKLDIQEGYEMELCNMMIECCSQERTWRSFYGLIGQRFCMMHRRWQAAFTECFETNYNTIHRLETNKLRNVAKFFAHLLYTDALPWTCLESIRLSEDATTSSSRIFIKILVLELSENMGLKNLRERYNDPYMAEVFQGMFPTDNPRNTRFAINFFTAIGLGGLTDGLRLHLKNAPKMIMEAQLAAAEADDGSS 1629 K + E+QR++WEALRK INGL+NK VN NI+ I PEL +LNLVRGRGL RA+MKAQLASPGFT ++AALVAV+NTKLPENGEL+LKRV+V FRRAY+RRDKVVAT AKF+AH+ N QVAHEL+ALQLLTVLL++PTDDSVEIAV FTKE+GQ+L E+SP+GL AVFERFRGILHEG IDKRVQYTIE LFA RK+GF+D+PAVP +LDLVERDDQITFE+ L+DK+++EE LD+F++D+ +E +E W +IK EILGE D XXXXXXXXXXXXXXXXX P IQDLTEQDLVNLRRTIYLTIMSS GFEECAHKL KLDI+ G EMELCNM+IECCSQERT+ +YGL+GQRFC+M + WQ AF + FE Y IHRLETNKLRNVAKFFAHLL TDALPWTCLE +RL+E+ TTSSSRIF+KIL EL+E++GL LR+R+ND YM++VF G+FP +NPR+TRFAINFFT+IGLGGLTD LR HLK AP+ IME Q+AAA A G S Sbjct: 61 KRSAEFQRLSWEALRKGINGLVNK-----------VNVGNIRSIVPELLELNLVRGRGLLCRALMKAQLASPGFTHIYAALVAVLNTKLPENGELLLKRVLVGFRRAYRRRDKVVATGFAKFLAHLCNHQVAHELVALQLLTVLLDDPTDDSVEIAVQFTKEVGQLLDEVSPRGLLAVFERFRGILHEGAAPRPTPPRDPPRFRVARRDPKSIRPGVIDKRVQYTIEGLFAARKAGFADYPAVPDDLDLVERDDQITFELSLDDKVDREEALDVFKVDDDFEAHEAAWVEIKREILGEDDDXXXXXXXXXXXXXXXXXA----------PAEVGPIQDLTEQDLVNLRRTIYLTIMSSVGFEECAHKLMKLDIRSGLEMELCNMLIECCSQERTYLRYYGLLGQRFCVMTKAWQEAFDKAFEEQYAMIHRLETNKLRNVAKFFAHLLETDALPWTCLEYVRLNEEETTSSSRIFVKILCQELAEHLGLATLRDRFNDQYMSDVFAGLFPRENPRDTRFAINFFTSIGLGGLTDALRKHLKEAPRRIMEQQMAAARAAVGDS 600
BLAST of mRNA_Ecto-sp6_S_contig100.717.1 vs. uniprot
Match: F0Y926_AURAN (Uncharacterized protein Auran_987 (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y926_AURAN) HSP 1 Score: 680 bits (1754), Expect = 1.990e-237 Identity = 356/526 (67.68%), Postives = 431/526 (81.94%), Query Frame = 1 Query: 1 MQKDAETMGKATKEYQRIAWEALRKSINGLINKATPGGLSITLQVNTTNIKMIAPELFQLNLVRGRGLFARAVMKAQLASPGFTPVFAALVAVVNTKLPENGELILKRVIVAFRRAYKRRDKVVATALAKFIAHMVNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIGQVLQELSPQGLHAVFERFRGILHEGQIDKRVQYTIETLFAIRKSGFSDHPAVPPELDLVERDDQITFEVGLEDKLEKEEMLDIFRMDEKYEENEDMWAKIKGEILGESDXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPQMTQQIQDLTEQDLVNLRRTIYLTIMSSAGFEECAHKLTKLDIQEGYEMELCNMMIECCSQERTWRSFYGLIGQRFCMMHRRWQAAFTECFETNYNTIHRLETNKLRNVAKFFAHLLYTDALPWTCLESIRLSEDATTSSSRIFIKILVLELSENMGLKNLRERYNDPYMAEVFQGMFPTDNPRNTRFAINFFTAIGLGGLTDGLRLHLKNAPK 1578 ++K + +++E+Q+++WE+LRK ING +NK VN +NI+ I PEL +LNLVRGRGL RA+MKAQLASPGFT ++AAL AV+NTKLPENGEL+LKRV+V FRRAYKRRDKVVATA AKF+ H+VN Q+AHEL+ALQLLTVLL+EPTDDSVEIAVNFTKE+GQ+L ++SP GL AVFERFRGILHEG IDKRVQYTIE LFA+RK+GF ++PAVP ELDLVER+DQITFE+ L+DK++KE++LD+FR+D+ +E +E WA IK EILG+ + XXXXXXXXXXXX P + IQDLTE DLVNLRRTIYLTIMSS GFEECAHKL KLDI+ G EMELCNM+IECCSQERT+ +YGL+GQRFC+ R WQ AF + FE Y IHRLETNKLRNVAKFFAHLL+TD+LPWTCLE +RL+E+ TTSSSRIFIKIL+ +L+EN+GL LR+R++D YM +VF G+FP +NPR+TRF+INFFT+IGLGGLTD LR HLK+APK Sbjct: 26 LRKQTAGLDASSREFQKLSWESLRKGINGHVNK-----------VNVSNIRSIVPELLELNLVRGRGLLCRALMKAQLASPGFTHIYAALAAVLNTKLPENGELLLKRVVVGFRRAYKRRDKVVATAFAKFLGHLVNHQIAHELVALQLLTVLLDEPTDDSVEIAVNFTKEVGQLLDQVSPAGLLAVFERFRGILHEGAIDKRVQYTIEGLFALRKTGFLEYPAVPEELDLVEREDQITFELSLDDKIDKEDLLDVFRVDDDFEAHEAAWADIKREILGDDESXXXXXXXXXXXXGAEPTAAT--------PAVGGPIQDLTETDLVNLRRTIYLTIMSSVGFEECAHKLMKLDIRPGLEMELCNMLIECCSQERTYLRYYGLLGQRFCVTTRVWQDAFDKAFEEQYAMIHRLETNKLRNVAKFFAHLLHTDSLPWTCLEYVRLNEEETTSSSRIFIKILMQDLAENLGLPTLRDRFDDQYMRDVFAGLFPRENPRDTRFSINFFTSIGLGGLTDALRKHLKDAPK 532
BLAST of mRNA_Ecto-sp6_S_contig100.717.1 vs. uniprot
Match: A0A7S3MAE0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MAE0_9STRA) HSP 1 Score: 676 bits (1745), Expect = 6.200e-230 Identity = 363/538 (67.47%), Postives = 423/538 (78.62%), Query Frame = 1 Query: 1 MQKDAETMGKATKEYQRIAWEALRKSINGLINKATPGGLSITLQVNTTNIKMIAPELFQLNLVRGRGLFARAVMKAQLASPGFTPVFAALVAVVNTKLPENGELILKRVIVAFRRAYKRRDKVVATALAKFIAHMVNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIGQVLQELSPQGLHAVFERFRGILHEGQIDKRVQYTIETLFAIRKSGFSDHPAVPPELDLVERDDQITFEVGLEDKLEKEEMLDIFRMDEKYEENEDMWAKIKGEILGESDXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPQMTQ--QIQDLTEQDLVNLRRTIYLTIMSSAGFEECAHKLTKLDIQEGYEMELCNMMIECCSQERTWRSFYGLIGQRFCMMHRRWQAAFTECFETNYNTIHRLETNKLRNVAKFFAHLLYTDALPWTCLESIRLSEDATTSSSRIFIKILVLELSENMGLKNLRERYNDPYMAEVFQGMFPTDNPRNTRFAINFFTAIGLGGLTDGLRLHLKNAPKMI---MEAQL 1599 M+K +E A E Q+ +WEALRKSINGLINK +N +NIK I PELFQ NLVRGRGLFARAVMKAQLASPGFT ++A+LVAV+NTKLPENGELILKRVI F+RAYKRRDK+ ATALA+FI E+LAL LLTVLLEEPTDDSVEIAV F KE+GQ+L+ELSPQGLH VFERFRGILHEG IDKRVQYTIE LFA+RKSGF D+PA+P ELDLVER+DQITFE+G++D ++KEEMLDIFR+D +EENE +W +IK EILG+ + XXXXXXXXX + Q+ DLT+ +LVNLRR+IYLTIMSS FEEC HKL KL I +GYE EL NM++ECCS ER++ +YGL+GQRFCMMHR++Q AF + F YNTIHRLETNKLRNV KFF HLL TDALPWTCLE ++L+E TTSSSRIFIKILV EL+E MGL ++ER++DPYM +VF GMFPTDN RNTRFAINFFT+IGLGGLTDGLR HLKNAPK++ M+AQL Sbjct: 24 MKKQSEANDPANAENQKASWEALRKSINGLINK-----------INVSNIKHIVPELFQENLVRGRGLFARAVMKAQLASPGFTHIYASLVAVINTKLPENGELILKRVIYGFKRAYKRRDKITATALARFIXXXXXXXXXXEILALHLLTVLLEEPTDDSVEIAVGFVKEVGQLLEELSPQGLHFVFERFRGILHEGDIDKRVQYTIEGLFAVRKSGFKDYPAIPKELDLVEREDQITFEIGMDDDIDKEEMLDIFRVDPDFEENERLWEQIKKEILGDDEDEEYGADGDDEXXXXXXXXXQGNNGQGGAMTVAGAGQVIDLTDAELVNLRRSIYLTIMSSVSFEECCHKLMKLGIPDGYESELANMLVECCSNERSYIRYYGLMGQRFCMMHRKYQDAFDQVFLQQYNTIHRLETNKLRNVGKFFGHLLVTDALPWTCLEYVKLNEYDTTSSSRIFIKILVQELTEMMGLAVVKERFSDPYMQDVFSGMFPTDNARNTRFAINFFTSIGLGGLTDGLREHLKNAPKLLALQMQAQL 550
BLAST of mRNA_Ecto-sp6_S_contig100.717.1 vs. uniprot
Match: I2CP05_NANGC (Pre-mrna-splicing factor cwc-22 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP05_NANGC) HSP 1 Score: 657 bits (1695), Expect = 1.610e-227 Identity = 359/546 (65.75%), Postives = 425/546 (77.84%), Query Frame = 1 Query: 1 MQKDAETMGKATKEYQRIAWEALRKSINGLINKATPGGLSITLQVNTTNIKMIAPELFQLNLVRGRGLFARAVMKAQLASPGFTPVFAALVAVVNTKLPENGELILKRVIVAFRRAYKRRDKVVATALAKFIAHMVNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIGQVLQELSPQGLHAVFERFRGILHEGQIDKRVQYTIETLFAIRKSGFSDHPAVPPELDLVERDDQITFEVGLEDKLEKEEMLDIFRMDEKYEENEDMWAKIKGEILGESDXXXXXXXXXXXXXXXXXXXXXXXXXXXXQP--QMTQQIQDLTEQDLVNLRRTIYLTIMSSAGFEECAHKLTKLDIQEGYEMELCNMMIECCSQERTWRSFYGLIGQRFCMMHRRWQAAFTECFETNYNTIHRLETNKLRNVAKFFAHLLYTDALPWTCLESIRLSEDATTSSSRIFIKILVLELSENMGLKNLRERYNDPYMAEVFQGMFPTDNPRNTRFAINFFTAIGLGGLTDGLRLHLKNAPK-MIMEAQLAAAEADDGSS 1629 M+ + + K++K+YQR+ WEALRKSINGLINK VN +N+ I PELFQ NLVRGRGLF RAVMKAQLASPGFT ++AALVAVVNTKLPE GEL+L+RVI AFRRAYKRRDKVVAT L KFIAH+VNQQVAHE+LALQ++ VLL EPTDDSVEIAV F K++G +L+E+SP+GL A+FERFRGILHEG IDKRVQYTIE LFA+RKS F D+PA+P LDLVE++D+ITFE+ L+D + KEEMLD+FR D YE NE W +IK EILGES XXXXXXXXXXXXXX P Q + D+TEQDLVNL+RTIYLTIMSSAGFEE HKL KLD++ G EMELC M++ECCSQE+T+ +YG I R C+++R +Q AF E F+ Y+TIHRLETNKLRNVAK FAHLLY+D+LPWT E I L+E+ TTSSSRIFIKIL ELSE +GL L+ER++DPYM + F G+FP +PR TRFAINFF +IGLGGLTDGLR HLKN K ++ EAQ AA + SS Sbjct: 22 MEAEGKKEDKSSKDYQRMTWEALRKSINGLINK-----------VNVSNLAHIVPELFQENLVRGRGLFVRAVMKAQLASPGFTHIYAALVAVVNTKLPEVGELLLRRVIFAFRRAYKRRDKVVATGLVKFIAHLVNQQVAHEILALQIVEVLLGEPTDDSVEIAVAFVKDVGMLLEEVSPKGLRAIFERFRGILHEGVIDKRVQYTIEGLFAVRKSNFVDYPAIPESLDLVEKEDKITFEMSLDDDINKEEMLDVFRFDPDYEANERTWKEIKKEILGESGSEADDEXXXXXXXXXXXXXXRQEGGAVGMPGGNQVQVVYDMTEQDLVNLKRTIYLTIMSSAGFEEATHKLMKLDLKNGQEMELCLMLVECCSQEKTYLKYYGFIACRICLLNRVYQDAFEEVFKEQYSTIHRLETNKLRNVAKIFAHLLYSDSLPWTVFECIHLNEEDTTSSSRIFIKILCQELSEQLGLAKLKERFSDPYMEQAFAGLFPKHDPRATRFAINFFVSIGLGGLTDGLRTHLKNYQKRLVEEAQAAALRQAEESS 556
BLAST of mRNA_Ecto-sp6_S_contig100.717.1 vs. uniprot
Match: A0A024G2H1_9STRA (MI domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G2H1_9STRA) HSP 1 Score: 659 bits (1699), Expect = 1.230e-226 Identity = 339/522 (64.94%), Postives = 405/522 (77.59%), Query Frame = 1 Query: 28 KATKEYQRIAWEALRKSINGLINKATPGGLSITLQVNTTNIKMIAPELFQLNLVRGRGLFARAVMKAQLASPGFTPVFAALVAVVNTKLPENGELILKRVIVAFRRAYKRRDKVVATALAKFIAHMVNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIGQVLQELSPQGLHAVFERFRGILHEGQIDKRVQYTIETLFAIRKSGFSDHPAVPPELDLVERDDQITFEVGLEDKLEKEEMLDIFRMDEKYEENEDMWAKIKGEILGESDXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPQMTQQ--IQDLTEQDLVNLRRTIYLTIMSSAGFEECAHKLTKLDIQEGYEMELCNMMIECCSQERTWRSFYGLIGQRFCMMHRRWQAAFTECFETNYNTIHRLETNKLRNVAKFFAHLLYTDALPWTCLESIRLSEDATTSSSRIFIKILVLELSENMGLKNLRERYNDPYMAEVFQGMFPTDNPRNTRFAINFFTAIGLGGLTDGLRLHLKNAPKMIM 1587 K ++EYQR+ W+ALRKS+NGLINK VN +N I PELFQ NLVRGRG+ R++MKAQLASPGFT ++AALVAV+NTK+PENGEL++KRV+ FRR+++R DKVVA AL +FIAH+VNQQ+ HELLAL++LT+LL PTDDSVE+AVNFTKE GQ+L EL P+GL A+FERFRGILHEG IDKRVQYTIE LFAIRK GF+D+PAV +LDLVE DQIT E+GLED+++ E+ LD+FR D YE+NE MW +IK EILGESD + Q +QQ IQD TEQDLVNLRRTIYLTIMSS G EECAHKL K+ I+ G E E+C+M+IECCSQERT+ +YGL+GQRFC++ R +Q AF ECF Y+ IHRLETNKLRNVAKFFAHLL+TDALPWT LE IRL+E+ TTSSSRIFIK+L EL+E+MG+K L+ER D YM E F G+FP D+PRNTRFAINFFT+IGLGGLT LR LKNAPK+IM Sbjct: 142 KTSQEYQRMTWDALRKSLNGLINK-----------VNVSNTANIIPELFQENLVRGRGILTRSIMKAQLASPGFTHIYAALVAVLNTKMPENGELLIKRVVYRFRRSFQRGDKVVAIALVRFIAHLVNQQIVHELLALEILTLLLASPTDDSVEVAVNFTKECGQILAELCPEGLRAIFERFRGILHEGDIDKRVQYTIEGLFAIRKGGFADYPAVHEQLDLVESGDQITHEIGLEDEIDPEDRLDVFRFDPDYEKNEAMWTEIKNEILGESDSENDQASSGDESDHAGEANEQ-------EQQNSQQNAIQDCTEQDLVNLRRTIYLTIMSSVGHEECAHKLLKIQIRSGQEKEICSMLIECCSQERTYLRYYGLLGQRFCLIKREYQDAFDECFMEQYSLIHRLETNKLRNVAKFFAHLLFTDALPWTILEYIRLNEEETTSSSRIFIKMLCQELAEHMGMKTLKERLTDEYMQETFAGLFPKDHPRNTRFAINFFTSIGLGGLTTELREFLKNAPKLIM 645
BLAST of mRNA_Ecto-sp6_S_contig100.717.1 vs. uniprot
Match: G4ZIS5_PHYSP (MI domain-containing protein n=7 Tax=Phytophthora TaxID=4783 RepID=G4ZIS5_PHYSP) HSP 1 Score: 654 bits (1687), Expect = 3.700e-226 Identity = 368/535 (68.79%), Postives = 426/535 (79.63%), Query Frame = 1 Query: 16 ETMGKATKEYQRIAWEALRKSINGLINKATPGGLSITLQVNTTNIKMIAPELFQLNLVRGRGLFARAVMKAQLASPGFTPVFAALVAVVNTKLPENGELILKRVIVAFRRAYKRRDKVVATALAKFIAHMVNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIGQVLQELSPQGLHAVFERFRGILHEGQIDKRVQYTIETLFAIRKSGFSDHPAVPPELDLVERDDQITFEVGLEDKLEKEEMLDIFRMDEKYEENEDMWAKIKGEILGESDXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPQMTQQ---IQDLTEQDLVNLRRTIYLTIMSSAGFEECAHKLTKLDIQEGYEMELCNMMIECCSQERTWRSFYGLIGQRFCMMHRRWQAAFTECFETNYNTIHRLETNKLRNVAKFFAHLLYTDALPWTCLESIRLSEDATTSSSRIFIKILVLELSENMGLKNLRERYNDPYMAEVFQGMFPTDNPRNTRFAINFFTAIGLGGLTDGLRLHLKNAPKMIMEAQLAAAE 1611 E G +++ QR W+ALRKS+NGLINK VN N+ I PELFQ NLVR RGL ARA+MKAQLASPGFT ++AALVAV+NTK+PENGEL++KRV+ FRRA+KR DKVVA AL +FIAH+VNQQV HELLAL++LT+LL PTDDSVE+AVNFTKE GQ+L EL P+GL A+FERFRGILHEG+IDKRVQYTIE LFAIRK GF+D+PAV +LDLVE DQIT E LEDK++ E+ LD+FR D YE+NE MW+ IK EILGESDXXXXXXXXXXXXXXXXXXXXXXX QP T IQD TEQDLVNLRRTIYLTIMSS EECAHKL KL+I+ G E E+C+M+IECCSQERT+ +YGL+ +RFC++ R +Q AF ECF Y+ IHRLETNKLRNVAK FAHLL+TDALPWT E IRL+E+ TTSSSRIFIKIL ELSE++G+K L+ER+ D M F G+FP DNPRNTRFAINFFT+IGLGGLT LR HLKNAPKMIME AAA+ Sbjct: 47 EDQGPSSEALQRRTWDALRKSLNGLINK-----------VNVANLSNILPELFQENLVRARGLLARAIMKAQLASPGFTHIYAALVAVINTKMPENGELLVKRVVFRFRRAFKRGDKVVAIALVRFIAHLVNQQVVHELLALEVLTLLLANPTDDSVEVAVNFTKECGQILAELCPEGLRAIFERFRGILHEGEIDKRVQYTIEGLFAIRKGGFADYPAVHEQLDLVESGDQITHETTLEDKIDCEDKLDVFRFDPDYEKNEQMWSAIKKEILGESDXXXXXXXXXXXXXXXXXXXXXXX-----QPVQTDNNVAIQDYTEQDLVNLRRTIYLTIMSSITHEECAHKLMKLNIRPGQEKEICSMLIECCSQERTYLRYYGLLSERFCLIKREYQDAFDECFAEQYSLIHRLETNKLRNVAKLFAHLLFTDALPWTVFEYIRLNEEETTSSSRIFIKILCQELSEHLGMKTLKERFLDEIMQPTFGGLFPKDNPRNTRFAINFFTSIGLGGLTTDLREHLKNAPKMIMEQAKAAAD 565 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.717.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig100.717.1 >prot_Ecto-sp6_S_contig100.717.1 ID=prot_Ecto-sp6_S_contig100.717.1|Name=mRNA_Ecto-sp6_S_contig100.717.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=591bp MQKDAETMGKATKEYQRIAWEALRKSINGLINKATPGGLSITLQVNTTNIback to top mRNA from alignment at Ecto-sp6_S_contig100:256210..263277- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig100.717.1 ID=mRNA_Ecto-sp6_S_contig100.717.1|Name=mRNA_Ecto-sp6_S_contig100.717.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=7068bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:256210..263277- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:256210..263277- >mRNA_Ecto-sp6_S_contig100.717.1 ID=mRNA_Ecto-sp6_S_contig100.717.1|Name=mRNA_Ecto-sp6_S_contig100.717.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1773bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:256210..263277- (Ectocarpus species6 EcLAC_371)back to top |