mRNA_Ecto-sp6_S_contig100.713.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig100.713.1 vs. uniprot
Match: D7FKG3_ECTSI (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKG3_ECTSI) HSP 1 Score: 1214 bits (3142), Expect = 0.000e+0 Identity = 637/696 (91.52%), Postives = 639/696 (91.81%), Query Frame = 3 Query: 201 MDQPSQEHPGALREDGHASAEREARILTWNINGLRKVAASHGGMQQLLDQFNADIVCFQEIKITRAGLVEHELARAQGYHGFFNHCKLPRKVSYSGVATFVRSESGLKTLASTTSLGDSAFFGSPGSFVGERRLSPDRLAALDSEGRVLVTDHGYFVLFNVYAPCVSSSSDDEKEKTEDRRAFKRDFLATLEARILEIRSRGRGVVLVGDLNACASQLDHGFTMTDSEFYASNWSKWIRGMLGLGSPEPPRLVDCFRHLHPDRKSAFTCWNTQTGARDNNYGTRIDYIIAGTDFADRALRACDIMPDFLGSDHCPVRARFAFPLAAGLAADAPGESEGDEIARSRSASEWPEHPPECSCFYPELTAKQEKLAKYFVAGGQNEESAVGTEGKGADGRLVRDGKGAGESGATRPAAGGGKGVAAFMRALPGAGVTGKDGASVAGSLMMRGKKVGSVGRTSSTSSSGGGSLTARRPGSGGSRQSKLAFGPAANGNVSTSAGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---RVHASGGGHDTAGXXXXXXXVSTIGSSRLSNPGGEGGVETGXXEGPNGGGGSRDSAEAWKAIFGRKKSAPTCEHGEPSIQRTVLKPGPNHNRRFYTCARSAGNWPTDRNARCTFFQWRRDGVRGYKDKPPRAEGGTNSNKKRRT 2279 MDQPSQEHPGALREDGHASAEREARILTWNINGLRKVAASHGG+QQLLDQFNADIVCFQEIKITRAGLVEHELARAQGYHGFFNHCKLPRKVSYSGVATFVRSESGLKTLASTTSLGDSAFFGSPGSFVGERRLSPDRLAALDSEGRVLVTDHG+FVLFNVYAPCVSSSSDDEKEKTEDRRAFKRDFLATLEARI EIRSRGRGVVLVGDLNACASQLDHGFTMTDSEFYASNWSKWIRGMLGLGSPEPPRLVDCFRHLHPDRKSAFTCWNTQTGARDNNYGTRIDYIIAGTDFADRALRACDIMPDFLGSDHCPVRARFAFPLAAGLAADAPGESEGDEIARSRSASEWPEHPPECSCFYPELTAKQEKLAKYFVAGGQNEESAVGTEGKGADGRLVRDG GA ESGATRPAAGGGKGVAAFMRALPGAGVTGKDGASVAGSLMMRGKKVGSVGRTSSTSSSGGGSLTARRPGSGGSRQSKLAFGPAANGNVSTSAGAT XXXXXXXX RVHASGGGHDTAG VSTIGS RLSNPGGEGGVETG EGPNGGGGSRDSAEAWKAIFGRKKSAPTCEHGEPSIQRTVLKPGPNHNRRFYTCARSAGNWPTDRNARCTFFQWRRDGVRGYKDKPPRAEGGTNSNKKRRT Sbjct: 1 MDQPSQEHPGALREDGHASAEREARILTWNINGLRKVAASHGGVQQLLDQFNADIVCFQEIKITRAGLVEHELARAQGYHGFFNHCKLPRKVSYSGVATFVRSESGLKTLASTTSLGDSAFFGSPGSFVGERRLSPDRLAALDSEGRVLVTDHGHFVLFNVYAPCVSSSSDDEKEKTEDRRAFKRDFLATLEARIFEIRSRGRGVVLVGDLNACASQLDHGFTMTDSEFYASNWSKWIRGMLGLGSPEPPRLVDCFRHLHPDRKSAFTCWNTQTGARDNNYGTRIDYIIAGTDFADRALRACDIMPDFLGSDHCPVRARFAFPLAAGLAADAPGESEGDEIARSRSASEWPEHPPECSCFYPELTAKQEKLAKYFVAGGQNEESAVGTEGKGADGRLVRDGNGARESGATRPAAGGGKGVAAFMRALPGAGVTGKDGASVAGSLMMRGKKVGSVGRTSSTSSSGGGSLTARRPGSGGSRQSKLAFGPAANGNVSTSAGATSREATAGGNGAGSGTSRRAEGTVPLRTCNQRGXXXXXXXXAQTSQAIQPPRSRVHASGGGHDTAGAGGGSGSVSTIGSCRLSNPGGEGGVETGPGEGPNGGGGSRDSAEAWKAIFGRKKSAPTCEHGEPSIQRTVLKPGPNHNRRFYTCARSAGNWPTDRNARCTFFQWRRDGVRGYKDKPPRAEGGTNSNKKRRT 696
BLAST of mRNA_Ecto-sp6_S_contig100.713.1 vs. uniprot
Match: A0A6H5KUC8_9PHAE (DNA-(apurinic or apyrimidinic site) endonuclease 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUC8_9PHAE) HSP 1 Score: 1015 bits (2625), Expect = 0.000e+0 Identity = 551/715 (77.06%), Postives = 569/715 (79.58%), Query Frame = 3 Query: 201 MDQPSQEHPGALREDGHASAEREARILTWNINGLRKVAASHGGMQQLLDQFNADIVCFQEIKITRAGLVEHELARAQGYHGFFNHCKLPRKVSYSGVATFVRSESGLKTLASTTSLGDSAFFGSPGSFVGERRLSPDRLAALDSEGRVLVTDHGYFVLFNVYAPCVSS---------SSDDEKEKTEDRRAFKRDFLATLEARILE-------------IRSRGRGVVLVGDLNACASQLDHGFTMTDSEFYASNWSKWIRGMLGLGSPEPPRLVDCFRHLHPDRKSAFTCWNTQTGARDNNYGTRIDYIIAGTDFADRALRACDIMPDFLGSDHCPVRARFAFPLAAGLAADAPGESEGDEIARSRSASEWPEHPPECSCFYPELTAKQEKLAKYFVAGGQNEESAVGTEGKGADGRLVRDGKGAGESGATRPAAGGGKGVAAFMRALPGAGVTGKDGASVAGSLMMRGKKVGSVGRTSSTSSSGGGSLTARRPGSGGSRQSKLAFGPAANGNVSTSAGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVHASGGGHDTAGXXXXXXXVSTIGSSRLSNPGGEGGVETGXXEGPNGGGGSRDSAEAWKAIFGRKKSAPTCEHGEPSIQRTVLKPGPNHNRRFYTCARSAGNWPTDRNARCTFFQWRRDGVRGYKDKPPRAEGGTNSNKKRRT 2279 M QPSQEHPGALREDGHA+AEREARILTWNINGLRKVAASHGG++QLLDQFNADIVCFQEIKITRAGLVEHELARAQGYHGFF+HCKLPRKVSYSGVATFVRSESGLKT+ASTTS GDSAFFGSPGSFVGERRLSPDRLAALDSEGRVLVTDHG+FVLFNVYAPC+ + + ED R+ L+AR L RSR V GDLNACASQLDHGFTMTDSEFYASNWSKWIRGMLGLGSPEPPRLVDCFRHLHPDRK AFTCWNTQTGARDNNYGTRIDYIIAGTDFADRALRACDIMPDFLGSDHCPVRARFAFPLA GLAADAPG+SEGDEIARSRS SE PEHPPECSCFYPELTAKQEKLAKYFVAGGQNEESAVGTEGKGA RL+ D GAG SG TRPAAGG +GV AFMRALPG GVTGKDGA VAGSLMMR KKVGS GRTS RPGSGGSRQSKLAFGP AN NVSTSAGA VHASGGGHDTAG XXXXX VSTIGSSR+S P V+TG EGPNG GGSRDSAEAWKAIFGRKKSAPTCEHGEPSIQRTVLKPGPNHNRRFYTCARSAGNWPTDRNARCTFFQWRRDGVRGYKDKPPRAEGG+N+ KKRRT Sbjct: 1 MAQPSQEHPGALREDGHATAEREARILTWNINGLRKVAASHGGVKQLLDQFNADIVCFQEIKITRAGLVEHELARAQGYHGFFHHCKLPRKVSYSGVATFVRSESGLKTVASTTSFGDSAFFGSPGSFVGERRLSPDRLAALDSEGRVLVTDHGHFVLFNVYAPCIRPPVLLVVLPVQLQLRRREGEDGRS------PGLQARFLGHAGSAHPRDPKPWARSRAGEV---GDLNACASQLDHGFTMTDSEFYASNWSKWIRGMLGLGSPEPPRLVDCFRHLHPDRKGAFTCWNTQTGARDNNYGTRIDYIIAGTDFADRALRACDIMPDFLGSDHCPVRARFAFPLAVGLAADAPGKSEGDEIARSRSESELPEHPPECSCFYPELTAKQEKLAKYFVAGGQNEESAVGTEGKGAYDRLIGDRNGAGASGVTRPAAGGRRGVVAFMRALPGTGVTGKDGAGVAGSLMMRAKKVGSAGRTSXXXXXXXXXXXXXRPGSGGSRQSKLAFGPVANDNVSTSAGAASREAPAGGRGEVSGTRRRAEGAVPLRTGNERAGGGGAQTSQAIQPPRST-VHASGGGHDTAGAXXXXXSVSTIGSSRISKPXXXXXVDTGSGEGPNGAGGSRDSAEAWKAIFGRKKSAPTCEHGEPSIQRTVLKPGPNHNRRFYTCARSAGNWPTDRNARCTFFQWRRDGVRGYKDKPPRAEGGSNNIKKRRT 705
BLAST of mRNA_Ecto-sp6_S_contig100.713.1 vs. uniprot
Match: A0A835ZDF2_9STRA (DNA-(apurinic or apyrimidinic site) endonuclease 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDF2_9STRA) HSP 1 Score: 247 bits (631), Expect = 4.710e-68 Identity = 285/721 (39.53%), Postives = 340/721 (47.16%), Query Frame = 3 Query: 339 LLDQFNADI--VCFQEIKITRAGLVEHELARAQGYHGFFNHCKLPRKVSYSGVATFVRSESGLKTLASTTSLGDSAFFGS---PGSFVGERRLSPDRLAALDSEGRVLVTDHGYFVLFNVYAPCVSSSSDDEKEKTEDRRAFKRDFLATLEARILEIRSRGRGVVLVGDLNACASQLDHGFTMTDSEFYASNWSKWIRGMLGL-----------GSPEPPRL--------------------------------------------VDCFRHLHPDRKSAFTCWNTQTGARDNNYGTRIDYIIAGTDFADRALRACDIMPDFLGSDHCPVRARFAFPLAAGLAADAPGESEGDEIARSRSASEWPEHPPECSCFYPELTAKQEKLAKYF----VAGG---------QNEESAVGTEGKGADGRLVRDGKGAGESGATRPAA------------------GGGKGVAAFMRALPGAGVTGKDGASVAGSLMMRGKKVGSVGRTSSTSSSGGGSLTARRPGSGGSRQSKLAFGPAANGNVSTSAGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVHASGGGHDTAGXXXXXXXVSTIGSSRLSNPGGEGGVETGXXEGPNGGGGSRDSAEAWKAIFGRKKSAPTCE-HGEPSIQRTVLKPGPNHNRRFYTCARSAGNWPTDRNARCTFFQWRRDGVRGYK 2225 LL Q +DI CFQE+K + L ELA+A G+H FF+ L K +YSGVATFVR+ G+ T ++ L D AFFG P GER AALD EGRV+ TDH FVLFNVYAPCVS ++ + E+RR FKRDF A LEAR ++ GR VVL GDLNACAS DH F M++++F AS WS+WIR MLG G + L VDCFR +P + AFTCWNT+ GAR NNYGTRIDY++A FA ALRA I P +GSDHCPV A F P A AA AP HPP+CSCF + KL +F V G N + + A D + E+ PAA G VA F G G G A + + G ++ + AFG AA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G G D S GSS + D+ AW+A+ K+ P C H EP+++RTVLK GPN RRFY CAR G+WP D NARC +F++R G RGY+ Sbjct: 31 LLAQLGSDIHIYCFQEVKQPKRSLPP-ELAKAPGFHAFFS---LSTK-AYSGVATFVRA--GVATASAAAGLADDAFFGGAPLPPPLRGERA------AALDREGRVVATDHVDFVLFNVYAPCVSG---EDAARAEERRHFKRDFNAALEARARQLVRAGRHVVLAGDLNACASPRDHCFAMSEADFLASPWSRWIRRMLGRSLESAAADGDDGDGDSYALSNGASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVDCFRRANPAAERAFTCWNTKKGARANNYGTRIDYVLASAAFARAALRASAIWPHVVGSDHCPVVATFDAPRAHAAAAAAP-------------------HPPQCSCFLAAVAVP--KLTAFFAPTRVRSGXXXXXXXXXDNASDSASQPPELACEAAEEDSTLSCEALFDVPAARFVQEPQDPILPPPCIPRAGATAVAPFFSGSSGGGANGVPRAQGFTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRGM--TQMTLKAFGAAAP-RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRGSD----------ASRAGSSGV------------------------DAKSAWQALLA-KRPPPVCSGHREPAVERTVLKAGPNQGRRFYCCARGEGDWPKDPNARCNYFEFRESGARGYR 676
BLAST of mRNA_Ecto-sp6_S_contig100.713.1 vs. uniprot
Match: A0A1S3K520_LINUN (DNA-(apurinic or apyrimidinic site) endonuclease n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3K520_LINUN) HSP 1 Score: 203 bits (516), Expect = 6.000e-53 Identity = 134/383 (34.99%), Postives = 198/383 (51.70%), Query Frame = 3 Query: 273 RILTWNINGLRKVAASHGGMQQLLDQFNADIVCFQEIKITRAGLVEHELARAQGYHGFFNHCKLPRKVSYSGVATF-------VRSESGLKTLASTTSLGDSAFFGSPGSFVGERRLSPDRLAALDSEGRVLVTDHGY---------FVLFNVYAPCVSSSSDDEKEKTEDRRAFKRDFLATLEARILEIRSRGRGVVLVGDLNACASQLDHGFTMTDSEFYASNWSKWIRGMLG-LGSPEPPR---------------LVDCFRHLHPDRKSAFTCWNTQTGARDNNYGTRIDYIIAGTDFADRALRACDIMPDFLGSDHCPVRARFAFPLAAGLAADAPGESEGDEIARSRSASEWPEHPPECSCFYPELTAKQEKLAKYF 1325 +I+TWNING+R A+ +++++D +ADIVCFQE K+TR L E A +GY +++ K+ + YSGVAT+ +++E GL L +TT +SA G G+ + + L +LD+EGRV++T H + NVY P +D E+E DR+ FK+ F L+ R + G V+++GDLN Q+DH + EF A KW+ L +G+ P +D FR+ P+ ++AFTCWNT TGAR NYGTRIDYI+A D + ++ C I PD GSDHCPV+A + +SA +PP C+ F PE + KQ+KL+++F Sbjct: 2 KIITWNINGIR---ATKSPLKKVIDDLDADIVCFQETKVTRDQLDE-PTAIVEGYSSYYSFSKV--RSGYSGVATYCKTHATPLKAEEGLTGLLATTG-DESALIGCYGNHAD---FTDEELQSLDNEGRVIITQHKIRAAEGREELLTIINVYVP----RADPERE---DRQVFKQRFCQLLQTRAEALVHAGSHVIILGDLNISHRQIDHCDPVEKEEFDARPSRKWLSAFLKPIGTAAEPAQDVEADTDSIVTGGIFLDTFRYFRPNEENAFTCWNTSTGARQTNYGTRIDYILASADLCEGLVKDCVIWPDIEGSDHCPVKAELTCNIV-------------------QSAK----YPPICTKFMPEFSGKQQKLSEFF 344
BLAST of mRNA_Ecto-sp6_S_contig100.713.1 vs. uniprot
Match: R7UJL9_CAPTE (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Capitella teleta TaxID=283909 RepID=R7UJL9_CAPTE) HSP 1 Score: 200 bits (509), Expect = 8.410e-53 Identity = 129/365 (35.34%), Postives = 183/365 (50.14%), Query Frame = 3 Query: 273 RILTWNINGLRKVAASHGGMQQLLDQFNADIVCFQEIKITRAGLVEHELARAQGYHGFFNHCKLPRKVSYSGVATFVRSE-SGLKTLASTTSLGDSAFFGSPGSFVGERRL-SPDRLAALDSEGRVLVTDHGYF---------VLFNVYAPCVSSSSDDEKEKTEDRRAFKRDFLATLEARILEIRSRGRGVVLVGDLNACASQLDHGFTMTDSEFYASNWSKWIRGMLGLGSPEPPRLVDCFRHLHPDRKSAFTCWNTQTGARDNNYGTRIDYIIAGTDFADRALRACDIMPDFLGSDHCPVRARFAFPLAAGLAADAPGESEGDEIARSRSASEWPEHPPECSCFYPELTAKQEKLAKYFVAG 1334 +ILTWNING+R AS + QL + +ADI+C QE KITR +++ A +G++ +F+ CK + YSGVAT+V++ + K T + ++ F G+ L + D + +LD+EGR ++T H + NVY P D E R AFK F L+ R I G V+++GD+NA +DH + EF KW+ +L + VD FRH HPD++ A+TCW T TGAR NYGTRIDYII T + + C I+PD GSDHCPV+A + E ++ +PP CS + PE KQ+KL+ YF G Sbjct: 2 KILTWNINGIR---ASKVPLPQLFETLDADIICIQETKITR-DMLDEATAIVEGFNAYFSFCKT--RSGYSGVATYVKNSCTPTKAEEGLTGVHEADKAEHSIGFHGDYSLYTEDEIRSLDNEGRCIMTQHKMLSDDGEEIRLTVINVYCPMAVLDDPDSVE----RMAFKLKFYDLLQKRAEAILQSGSHVIILGDVNASHRPIDHCDPCDEKEFNQHPSRKWLNNLLRTPTNSNGLFVDSFRHFHPDQREAYTCWQTLTGARATNYGTRIDYIIGDTRLVEDSFSDCVILPDVRGSDHCPVKAVLHW-----------------ECIPAKK------YPPLCSKYLPEFVGKQQKLSSYFSKG 333
BLAST of mRNA_Ecto-sp6_S_contig100.713.1 vs. uniprot
Match: A0A4W6DPU0_LATCA (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Lates calcarifer TaxID=8187 RepID=A0A4W6DPU0_LATCA) HSP 1 Score: 202 bits (513), Expect = 1.360e-52 Identity = 132/381 (34.65%), Postives = 186/381 (48.82%), Query Frame = 3 Query: 273 RILTWNINGLRKVAASHGGMQQLLDQFNADIVCFQEIKITRAGLVEHELARAQGYHGFFNHCKLPRKVSYSGVATFVR-------SESGLKTLASTTSLGDSAFFGSPGSFVGERRLSPDRLAALDSEGRVLVTDHGYF--------VLFNVYAPCVSSSSDDEKEKTEDRRAFKRDFLATLEARILEIRSRGRGVVLVGDLNACASQLDHGFTMTDSEFYASNWSKWIRGMLGLGSPEPPR--------------LVDCFRHLHPDRKSAFTCWNTQTGARDNNYGTRIDYIIAGTDFADRALRACDIMPDFLGSDHCPVRARFAFPLAAGLAADAPGESEGDEIARSRSASEWPEHPPECSCFYPELTAKQEKLAKYFV 1328 +I+TWNING+R GG++Q LD +ADI+C QE K+TR L++ A GY+ +F++ + + YSGVAT+ + +E GL L + G+ G + S + L LD+EGR ++T H + NVY P +D EK +R+ FK F L+ R I G V+++GD+N Q+DH + +F + KW+ L G PE R VD FR+ HP R +AFTCW+T TGAR NYGTRIDYI A A+ A DIMP+ GSDHCPV + + PL L + P PP C+ + PE KQ+KL+++ V Sbjct: 2 KIVTWNINGIRTF---RGGIKQALDSLDADIICVQETKVTR-DLLDERTAIVDGYNSYFSYSR--GRSGYSGVATYCKDSATPFAAEEGLSGLLTNHE-------GAVGCYGDHAEFSNEELQLLDNEGRAIITQHRIMCQDKVQTVTVINVYCP----RADPEKP---ERKQFKLHFYKLLQGRAEAILKDGSHVIVLGDVNTSHRQIDHCDPSDNDDFGENPGRKWLNSFLHSGKPEEDRDEEEPDGESVHGGKFVDTFRYFHPTRTNAFTCWSTLTGARQTNYGTRIDYIFADCQLAEEQFVAADIMPEVEGSDHCPVWGQLSCPL---LPSSKP--------------------PPLCTRYLPEFAGKQQKLSRFLV 339
BLAST of mRNA_Ecto-sp6_S_contig100.713.1 vs. uniprot
Match: A0A8K1CH33_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CH33_PYTOL) HSP 1 Score: 200 bits (509), Expect = 1.440e-52 Identity = 129/368 (35.05%), Postives = 187/368 (50.82%), Query Frame = 3 Query: 264 REARILTWNINGLRKVAASHG--GMQQLLDQFNADIVCFQEIKITRAGLVEHELARAQGYHGFFNHCKLPRKVSYSGVATFVRSESGLKTLASTTSLGDSAFFGSPGSFVGERRL--SPDRLAALDSEGRVLVTDHGYFVLFNVYAPCVSSSSDDEKEKTEDRRAFKRDFLATLEARILEIRSRGRGVVLVGDLNACASQLDH--GFTMTDSEFYASNWSKWIRGMLGLGSPEPPR-------LVDCFRHLHPDRKSAFTCWNTQTGARDNNYGTRIDYIIAGTDFADRALRACDIMPDFLGSDHCPVRARFAFPLAAGLAADAPGESEGDEIARSRSASEWPEHPPECSCFYPELTAKQEKLAKYFV 1328 R R++TWN+NGLR + +Q+LLD + +I CFQE K+TR+ + E EL R GY F++ K+ + YSGV TF ++ + T+A+ L VG L S L L+SEGR ++TDH FVL NVY P ++S+ DR +K F L R+ ++ GR VV+VGD+N ++DH D F +W+ ++ P+ P+ LVD FRH HP R AFTCWN T AR NYGTRIDYI+ + D ++ +C+I P+ GSDHCPV ++ + +G+ A++ S C+ FY E + KQ+ + YF Sbjct: 3 RPVRLMTWNVNGLRAILQREKKRNVQELLDGLDVEIACFQETKLTRSEMDE-ELVRPAGYDAFYSFSKV--RSGYSGVVTFCKTGV-VPTIAAEEGLTGMWKVDDSVGHVGTAHLELSAKLLNELESEGRCVITDHQAFVLLNVYCPALASA---------DRLEYKLAFHELLHDRVAALQRAGRRVVVVGDINISHKEIDHCDPSPYHDGAFGDHPCRQWMDRVVVPNDPDQPQQEHKAGQLVDSFRHFHPTRTKAFTCWNMVTAARQTNYGTRIDYILVDPELMDDSVVSCEIEPERTGSDHCPVVSKLVVQF----------DLDGEAGAKTASL---------CARFYAEFSGKQQTIKSYFA 338
BLAST of mRNA_Ecto-sp6_S_contig100.713.1 vs. uniprot
Match: G4YUZ8_PHYSP (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YUZ8_PHYSP) HSP 1 Score: 199 bits (506), Expect = 1.760e-52 Identity = 129/318 (40.57%), Postives = 175/318 (55.03%), Query Frame = 3 Query: 264 REARILTWNINGLRKVAASHG-GMQQLLDQFNADIVCFQEIKITRAGLVEHELARAQGYHGFFNHCKLPRKVSYSGVATFVRSESGLKTLASTTSLG------DSAFFGSPGSFVGERRLSPDRLAALDSEGRVLVTDHGYFVLFNVYAPCVSSSSDDEKEKTEDRRAFKRDFLATLEARILEIRSRGRGVVLVGDLNACASQLDHGFTMTD----SEFYASNWSKWIRGMLGLGSP-------EPP-----RLVDCFRHLHPDRKSAFTCWNTQTGARDNNYGTRIDYIIAGTDFADRALRACDIMPDFLGSDHCPV 1148 R R++TWN+NGLR V G +QQ L+ ADI+C QE K+TR+ L + EL R G+ F++ C+ + YSGV TFV+S+ L T+A+ L DS G GS E LS ++ L++EGR ++TDH FVL N Y P ++S+ DR +K F A LE R+ +R + VV+VGD+N ++DH T S F +W+ G +G EP ++VD FRH +P + AFTCWNTQTGAR NYGTRIDYI+ F +++ AC I D LGSDHCPV Sbjct: 3 RSLRLVTWNVNGLRAVLQRLGQNLQQFLEGLEADIICLQETKMTRSEL-DQELVRPPGFDAFYSFCR--HRGGYSGVVTFVKSD--LPTVAAEEGLTGLWQAKDSV--GHLGSLQNE--LSSKLVSDLEAEGRCVITDHQAFVLLNTYCPALASA---------DRLEYKLQFHALLEDRVRALRRANKRVVVVGDINIAHREIDHCDPDTHRADGSSFADHPCRRWMDGFVGKPEEQDCNFYSEPKSGYEFKMVDAFRHFYPTQTKAFTCWNTQTGARQTNYGTRIDYILVDPAFL-QSVTACSIEADRLGSDHCPV 301
BLAST of mRNA_Ecto-sp6_S_contig100.713.1 vs. uniprot
Match: A0A5D6XGU0_9STRA (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XGU0_9STRA) HSP 1 Score: 199 bits (506), Expect = 7.840e-52 Identity = 124/326 (38.04%), Postives = 172/326 (52.76%), Query Frame = 3 Query: 252 ASAEREARILTWNINGLRKVAASHGG-MQQLLDQFNADIVCFQEIKITRAGLVEHELARAQGYHGFFNHCKLPRKVSYSGVATFVRS-------ESGL----KTLASTTSLGDSAFFGSPGSFVGERRLSPDRLAALDSEGRVLVTDHGYFVLFNVYAPCVSSSSDDEKEKTEDRRAFKRDFLATLEARILEIRSRGRGVVLVGDLNACASQLDHGFTMTDSE--FYASNWSKWIRGML-------------GLGSPEPPRLVDCFRHLHPDRKSAFTCWNTQTGARDNNYGTRIDYIIAGTDFADRALRACDIMPDFLGSDHCPV 1148 A+ R R++TWNINGLR V + +L+ +AD+VCFQE K+TR+ L E EL R +G+ F++ C++ + YSGV TFVR+ E GL KT S +GD R P ++ L++EGR ++TDH FVL NVY P V +S +R FK F L+ R+ ++ G+ VV+VGD+N ++DH E F +W+ +L L EP RLVD FR+ HP A+TCWNT+TGAR N+GTRIDYI+ + ++ C + PD LGSDHCPV Sbjct: 6 ATTARGLRVMTWNINGLRAVLQREKTKLAAMLEDLDADVVCFQETKLTRSELDE-ELVRVEGFDAFYSFCRV--RGGYSGVVTFVRTGIPTPRAEEGLTGAWKTETSVGHVGDL-----------HREFEPKLVSELEAEGRCVITDHEAFVLLNVYCPAVRNS---------ERLEFKLAFHQLLQDRVRALQRAGKFVVVVGDINIAHREIDHCEPSASEELAFGDHPCRRWMDAVLYDVDVRRDSLQGIPLDEREPGRLVDSFRYFHPLEAKAYTCWNTKTGARQTNFGTRIDYILVDPELMSSSVTDCVLQPDRLGSDHCPV 308
BLAST of mRNA_Ecto-sp6_S_contig100.713.1 vs. uniprot
Match: A0A0W8BN45_PHYNI (DNA-(apurinic or apyrimidinic site) endonuclease n=15 Tax=Phytophthora TaxID=4783 RepID=A0A0W8BN45_PHYNI) HSP 1 Score: 197 bits (502), Expect = 1.110e-51 Identity = 126/318 (39.62%), Postives = 169/318 (53.14%), Query Frame = 3 Query: 264 REARILTWNINGLRKVAAS-HGGMQQLLDQFNADIVCFQEIKITRAGLVEHELARAQGYHGFFNHCKLPRKVSYSGVATFVRSESGLKTLASTTSLGD----SAFFGSPGSFVGERRLSPDRLAALDSEGRVLVTDHGYFVLFNVYAPCVSSSSDDEKEKTEDRRAFKRDFLATLEARILEIRSRGRGVVLVGDLNACASQLDH----GFTMTDSEFYASNWSKWIRGMLGLGSP----EPPR----------LVDCFRHLHPDRKSAFTCWNTQTGARDNNYGTRIDYIIAGTDFADRALRACDIMPDFLGSDHCPV 1148 R+ R++TWN+NGLR V +QQ L+ ADI+C QE K+TR+ L E EL R G+ F++ C+ + YSGV TFV+S+ L T+A+ L G GS E L + L+SEGR ++TDH FVL N Y P ++SS DR +K F A LE R+ +R+ + VV+VGD+N ++DH + F KW+ LG EP R L+D +RH HPD+ AFTCWNTQTGAR NYGTRIDYI+ F + + C I + +GSDHCPV Sbjct: 3 RKLRLVTWNVNGLRAVLQRLEQNLQQFLESLEADIICLQESKLTRSELDE-ELVRPPGFDAFYSFCR--HRGGYSGVVTFVKSD--LPTVAAEEGLTGLWKTKDNVGHVGSLHNE--LPSKLVNDLESEGRCIITDHQAFVLLNTYCPALASS---------DRLEYKLQFHALLEDRVNALRAANKRVVVVGDINIAHREIDHCDPQAHRSDGNSFGDHPCRKWMDSFLGSSDETSLSEPNRDEITGVTGVKLIDTYRHFHPDQNKAFTCWNTQTGARQTNYGTRIDYILVDPTFVE-CVSTCSIDAERVGSDHCPV 303 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.713.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig100.713.1 >prot_Ecto-sp6_S_contig100.713.1 ID=prot_Ecto-sp6_S_contig100.713.1|Name=mRNA_Ecto-sp6_S_contig100.713.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=694bp MDQPSQEHPGALREDGHASAEREARILTWNINGLRKVAASHGGMQQLLDQback to top mRNA from alignment at Ecto-sp6_S_contig100:222283..226605+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig100.713.1 ID=mRNA_Ecto-sp6_S_contig100.713.1|Name=mRNA_Ecto-sp6_S_contig100.713.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4323bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:222283..226605+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:222283..226605+ >mRNA_Ecto-sp6_S_contig100.713.1 ID=mRNA_Ecto-sp6_S_contig100.713.1|Name=mRNA_Ecto-sp6_S_contig100.713.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2082bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:222283..226605+ (Ectocarpus species6 EcLAC_371)back to top |