mRNA_Ecto-sp6_S_contig100.712.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig100.712.1 vs. uniprot
Match: A0A6H5KV97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV97_9PHAE) HSP 1 Score: 717 bits (1852), Expect = 7.400e-254 Identity = 415/546 (76.01%), Postives = 427/546 (78.21%), Query Frame = 1 Query: 175 MRWSRPEARKKPRISALTP-GARSLSAAQTAWATSPAAGSAATRCSNNRRRLATARAASRTTTRLPANAHARRRRQAIPSLSSADTEDPEAAAGQSLFIFGVGYVATAVALTFLRKGWTVHGTCTDPRKVKSLGDQGIKAFIFDDWSGPMMQPEPLSALASATCVLSTVPPALQSGADPVLVAHEAELQWARSKGNLRWVGYLSSTGVYGDRGGGWVTEEDEPWPAAPRTKARLKAERSWLRLHERDGLPVHVFRLAGIYGPGRSALDAVARHNGDIRLAGSDDGTMVSRTHVSDIVGVVEASIERPAPGMVLNVADDLPSTRYEARRCFALERTLAYGCKLLGFPRQDPDPAEKYVNRRGGGNKRVDNERMRALLAASGRSLTFPDYRSGLKAVQEGDGRPFTAEEPTVEPASGQDGGRSEAPSFDPANANANTAAAAGGRQEEGDVSAQLGALNAQVSRLEAKLGRVLTILEERDTSXXXXXXXXXXXXXXXXGKPASDGGCVGGQSEEGVVGEA-SSRGETVLWEEGEALPDGVKHLAADADS 1806 MR SRPE R+KPRISALTP G RSLSAAQTAWA SPAAGSAA RCSNNRRR ATARAASRTTTRLPANAHARRRRQAIP LSSA+TE PEAAAGQSLFIFGVGYVATAVALTFLRKGWTVHGTCTDPRKVKSLGDQGIKAFIFDDWSGPMMQPEPLSALASATCVLSTVPPALQSGADPVLVAHEAELQWARSKGNLRWVGYLSSTG +G W L+ ++ R ERDGLPVHVFRLAGIYGPGRSALDAVARHNGDIRLAGSDDGTMVSRTHV DIVGVVEASIERP PGMVLNVADDLPSTRYEARRCFA ER G +L G ++ RG R GLKAV EGDGRPFTAEEPTVEPASGQDGGRS APSFD ANANA T A GRQE GDV+AQLGALNAQV+RLEAKLGRVLTILEERDTS GKPA+ G VGGQ EEGVVGEA S RGETVLWEEGEALPDGVKHLAADADS Sbjct: 1 MRCSRPETRRKPRISALTPTGVRSLSAAQTAWAASPAAGSAAIRCSNNRRRQATARAASRTTTRLPANAHARRRRQAIPPLSSAETEAPEAAAGQSLFIFGVGYVATAVALTFLRKGWTVHGTCTDPRKVKSLGDQGIKAFIFDDWSGPMMQPEPLSALASATCVLSTVPPALQSGADPVLVAHEAELQWARSKGNLRWVGYLSSTG----KGTMW-----------------LRMDKRACR-QERDGLPVHVFRLAGIYGPGRSALDAVARHNGDIRLAGSDDGTMVSRTHVFDIVGVVEASIERPEPGMVLNVADDLPSTRYEARRCFAFERVG--GDRLPGVFSHPKLTTSRHPRTRG----------------------PLASIRRGLKAVHEGDGRPFTAEEPTVEPASGQDGGRSVAPSFDAANANATTVTVASGRQEVGDVTAQLGALNAQVARLEAKLGRVLTILEERDTSSSGSGVAAVGAAADEDGKPAAGVGRVGGQPEEGVVGEAISRRGETVLWEEGEALPDGVKHLAADADS 500
BLAST of mRNA_Ecto-sp6_S_contig100.712.1 vs. uniprot
Match: D7FKG5_ECTSI (NAD-dependent epimerase/dehydratase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKG5_ECTSI) HSP 1 Score: 621 bits (1602), Expect = 4.680e-218 Identity = 347/398 (87.19%), Postives = 350/398 (87.94%), Query Frame = 1 Query: 619 MMQPEPLSALASATCVLSTVPPALQSGADPVLVAHEAELQWARSKGNLRWVGYLSSTGVYGDRGGGWVTEEDEPWPAAPRTKARLKAERSWLRLHERDGLPVHVFRLAGIYGPGRSALDAVARHNGDIRLAGSDDGTMVSRTHVSDIVGVVEASIERPAPGMVLNVADDLPSTRYEARRCFALERTLAYGCKLLGFPRQDPDPAEKYVNRRGGGNKRVDNERMRALLAASGRSLTFPDYRSGLKAVQEGDGRPFTAEEPTVEPASGQDGGRSEAPSFDPANANANTAAAAGGRQEEGDVSAQLGALNAQVSRLEAKLGRVLTILEERDTSXXXXXXXXXXXXXXXX-GKPASDGGCVGGQSEEGVVGEAS-SRGETVLWEEGEALPDGVKHLAADADS 1806 MMQPEPLS LASATCVLSTVPPALQSGADPVLVAHEAELQWARSKGNLRWVGYLSSTGVYGDRGGGWVTEEDEPWPAAPRTKARLKAERSWLRLHERDGLPVHVFRLAGIYGPGRSALDAVARHNGDIRLAGSDDGTMVSRTHVSDIVGVVEASIE PAPGMVLNVADDLPSTRYEARR GGGNKRVDNERMRALLAASGRSLTFPDYRSGLKAV EGDGRPFTAEEPTVEPASGQ GGRS APSFD ANANA TAAAAGGRQEEGDVSAQLGALNAQV+RLEAKLGR+LTILEERDTSXXXXXXXXXX GKPASDGGCVGGQSEEGVVGEAS SRGETVLWEEGEALPDG+KHLA DADS Sbjct: 1 MMQPEPLSVLASATCVLSTVPPALQSGADPVLVAHEAELQWARSKGNLRWVGYLSSTGVYGDRGGGWVTEEDEPWPAAPRTKARLKAERSWLRLHERDGLPVHVFRLAGIYGPGRSALDAVARHNGDIRLAGSDDGTMVSRTHVSDIVGVVEASIELPAPGMVLNVADDLPSTRYEARR--------------------------------GGGNKRVDNERMRALLAASGRSLTFPDYRSGLKAVHEGDGRPFTAEEPTVEPASGQHGGRSVAPSFDAANANATTAAAAGGRQEEGDVSAQLGALNAQVARLEAKLGRMLTILEERDTSXXXXXXXXXXGAAANEDGKPASDGGCVGGQSEEGVVGEASISRGETVLWEEGEALPDGIKHLAGDADS 366
BLAST of mRNA_Ecto-sp6_S_contig100.712.1 vs. uniprot
Match: D7FKG4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKG4_ECTSI) HSP 1 Score: 338 bits (868), Expect = 1.140e-109 Identity = 189/200 (94.50%), Postives = 190/200 (95.00%), Query Frame = 1 Query: 1 MRRPSSTSSVFLLWASLQGVDAGRSSLIAGRMAASPPGAATSGATATTLCSSSGHSSRMRWSRPEARKKPRISALTPGARSLSAAQTAWATSPAAGSAATRCSNNRRRLATARAASRTTTRLPANAHARRRRQAIPSLSSADTEDPEAAAGQSLFIFGVGYVATAVALTFLRKGWTVHGTCTDPRKVKSLGDQGIKAFIF 600 MRRPSSTSSVFLLWASLQGVDAGRSSLIAGRMAASPPGAATSGATATT CSSSGH SRMRWSRPE RKKPRISALTPGARSLSAAQTAWATSPAAGSAATRCSNNRRRLA RAAS TTTRLPANAHARRRRQAIP LSSADTEDPEAAAGQSLFIFGVGYVATAVALTFLRKGWTVHGTCTDPRKVKSLGDQGIK + Sbjct: 1 MRRPSSTSSVFLLWASLQGVDAGRSSLIAGRMAASPPGAATSGATATTFCSSSGHGSRMRWSRPEERKKPRISALTPGARSLSAAQTAWATSPAAGSAATRCSNNRRRLA--RAASHTTTRLPANAHARRRRQAIPPLSSADTEDPEAAAGQSLFIFGVGYVATAVALTFLRKGWTVHGTCTDPRKVKSLGDQGIKRELL 198
BLAST of mRNA_Ecto-sp6_S_contig100.712.1 vs. uniprot
Match: A0A7S0SU05_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SU05_9STRA) HSP 1 Score: 250 bits (639), Expect = 4.090e-74 Identity = 126/275 (45.82%), Postives = 180/275 (65.45%), Query Frame = 1 Query: 535 GTCTDPRKVKSLGDQGIKAFIFDDWSGPMMQPEPLSALASATCVLSTVPPALQSGADPVLVAHEAELQWARSKGNLRWVGYLSSTGVYGDRGGGWVTEEDEPWPAAPRTKARLKAERSWLRLHERDGLPVHVFRLAGIYGPGRSALDAVARHNGDIRLAGSDDGTMVSRTHVSDIVGVVEASIERPAPGMVLNVADDLPSTRYEARRCFALERTLAYGCKLLGFPRQDPDPAEKYVNRRGGGNKRVDNERMRALLAASG-RSLTFPDYRSGLKAV 1356 GT T K+K + GI A++FD+ SGPM+ + L+ L +A+ VL+T+PP ++G D VL H ++ A KG+ +W+GY+SSTG+YGD G WV E P +T AR KA+ +W LH R+ LP+H+FR AGIYGP RS LD + + NGD + G+DD T++SR H+ D+V V+ AS+ P+ G+ +NVADDLP+TR++A L YG +LLG+P Q P +E GG+KR+DN M+ LL A+G L+FPDYRSG+K++ Sbjct: 1 GTSTSVSKIKHYKNNGINAYLFDNLSGPMIDNDALNKLYNASHVLNTIPPDQENGEDYVLTCHGNDITQAVIKGSTKWIGYISSTGIYGDCKGDWVNENSPINPENRKTLARSKADNAWWTLHTRNSLPIHIFRCAGIYGPNRSILDILKKSNGDFKACGADDTTIISRIHIKDLVNVLIASMILPSNGLKVNVADDLPATRFDA---------LLYGSRLLGYPLQSPTYSESSSR---GGSKRIDNSVMKVLLKAAGLNELSFPDYRSGIKSI 263
BLAST of mRNA_Ecto-sp6_S_contig100.712.1 vs. uniprot
Match: A0A836C9P5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9P5_9STRA) HSP 1 Score: 228 bits (580), Expect = 1.830e-65 Identity = 139/308 (45.13%), Postives = 182/308 (59.09%), Query Frame = 1 Query: 448 AGQSLFIFGVGYVATAVALTFLRKGWTVHGTCTDPRKVKSLGD-QGIKAFIFDDWSGPMMQPEPLSALASATCVLSTVPPALQSGADPVLVAHEAELQWARSKGNLRWVGYLSSTGVYGDRGGGWVTEEDEPWPAAPRTKARLKAERSWLRLHERDGLPVHVFRLAGIYGPGRSALDAVARHNGDIRL-AGSDDG-TMVSRTHVSDIVGVVEASIERPAPGMVLNVADDLPSTRYEARRCFALERTLAYGCKLLGFPRQDPDPAEKYVNRRGGGNKRVDNERMRALLAASGRSLTFPDYRSGLKAVQE 1362 A LFIFGVGY A+A++ + +G+TV GTCT K+++L + GI F+FD + E ++A+ S T VLST+PP G +PVL+ H LQ RS L+W+GYLSSTGVYGD GG WVTE P P + +ARL AER+W R +P VFRLAGIYGPGRSALD + +GD+ AG+ D T VSR HV+DI AP +++N+AD P++R+E A+ +LLG YV+ RGGG+KRVD +R +L A G L +PDY SGL AV E Sbjct: 15 ASGKLFIFGVGYTGLAIAVSAMNRGYTVSGTCTSDSKLQALQNGYGISTFLFDGTEP--LSIEGVAAITSCTHVLSTIPPGAD-GTEPVLLHHARHLQ--RST-RLQWLGYLSSTGVYGDAGGDWVTEHTPPSPTTLKARARLTAERAWQDSDSR--VPARVFRLAGIYGPGRSALDTLVAKDGDMAACAGARDAVTPVSRIHVADIAQARCRGAPAAAPPLLVNLADARPASRHEV---------FAHAARLLGCAAVPAAADAAYVSARGGGSKRVDGTLLRRMLQARGLQLVYPDYESGLAAVAE 305
BLAST of mRNA_Ecto-sp6_S_contig100.712.1 vs. uniprot
Match: A0A835ZAQ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAQ7_9STRA) HSP 1 Score: 219 bits (559), Expect = 1.020e-61 Identity = 143/302 (47.35%), Postives = 170/302 (56.29%), Query Frame = 1 Query: 619 MMQPEPLSALASATCVLSTVPPALQSGADPVLVAHEAELQWARSKGNLRWVGYLSSTGVYGDRGGGWVTEEDEP--WPAAPRTKARLKAERSWLRLH------ERDG--------------LPVHVFRLAGIYGPGRSALDAVARHNGDIRLAG-SDDGTMVSRTHVSDIVGVVEASIERPAPGMVLNVADDLPSTRYEARRCFALERTLAYGCKLLGFPRQDPDPAEKYVNRRGGGNKRVDNERMRALL-------AASGRS------------------LTFPDYRSGLKAVQEGDGRPF 1380 MMQ EPL+AL S+T +LST+PP L SGADPVL+AH EL AR + +RW+ YLSSTGVYG+R GGWV E P PR + RL AERSW L +R G LP+ VFRLA +YGPGRSAL+AVA GD+ AG +DD +VSR HV+D+ + A+ P G V+NVADDLPSTRYE R R LAY L+G+PRQDPD E R +RVDN MRALL AAS L FP Y +GL A+ GD RP Sbjct: 1 MMQEEPLAALLSSTHILSTIPPTLASGADPVLLAHGDELLRARRR--IRWLAYLSSTGVYGERRGGWVASEAAAPREPLHPRARLRLAAERSWSALAACPLQPDRHGXXXXXXXXXXXXPQLPLEVFRLAAVYGPGRSALEAVAACGGDLVGAGLADDAGLVSRVHVADVCAALGAAAAAPRAGRVVNVADDLPSTRYEVRSEGG--RALAYAAALMGYPRQDPDEVEFGGARSRSSGRRVDNSAMRALLRRARNAGAASATIGXXXXXXXXADCCHRHGLLLFPTYLAGLDALHAGDNRPL 298
BLAST of mRNA_Ecto-sp6_S_contig100.712.1 vs. uniprot
Match: A0A2D6JW02_9PROT (NAD(P)-dependent oxidoreductase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D6JW02_9PROT) HSP 1 Score: 216 bits (551), Expect = 1.630e-61 Identity = 137/308 (44.48%), Postives = 174/308 (56.49%), Query Frame = 1 Query: 460 LFIFGVGYVATAVALTFLRKGWTVHGTCTDPRKVKSLGDQGIKAFIFDDWSGPMMQPEPLSALASATCVLSTVPPALQSGADPVLVAHEAELQWARSKGNLRWVGYLSSTGVYGDRGGGWVTEEDEPWPAAPRTKARLKAERSWLRLHERDGLPVHVFRLAGIYGPGRSALDAVARHNGDIRLAGSDDGTMVSRTHVSDIVGVVEASIERPAPGMVLNVADDLPSTRYEARRCFALERTLAYGCKLLGF---PRQDPDPAEKYVNRRG----GGNKRVDNERMRALLAASGRSLTFPDYRSGLKAVQE 1362 LF FG+GY A +A L +GW V GTC P + L D GIKA +FD P+ SAL+ T +LS+VPP DPVL H ++++ + + WVGYLSSTGVYGD GG VTE+ P++ R + R +AE +WL L GLPVHVFRLAGIYGPGRSALD V G R+ G M SR H+ DI V+ AS++RP PG V NV DD P+ A A+ C+LLG P Q AEK ++ N+ VDN R++ L G SL PDYR+GL+A+ E Sbjct: 10 LFCFGLGYSAGRLARLLLARGWAVAGTCQSPDRQAELADWGIKALVFDP-ERPLADAP--SALSGVTHLLSSVPP--DENGDPVLARHGSDIEAMKG---VSWVGYLSSTGVYGDTGGNTVTEDSAVNPSSDRGRRRAEAEAAWLALENDQGLPVHVFRLAGIYGPGRSALDQVRAGRGK-RI--DKPGHMFSRIHIDDIAQVLRASMDRPDPGAVYNVCDDEPA---------AAADVTAFACELLGLEPPPLQPFAEAEKEMSEMALSFWRDNRLVDNRRIKEEL---GVSLLHPDYRAGLRAIFE 294
BLAST of mRNA_Ecto-sp6_S_contig100.712.1 vs. uniprot
Match: A0A1Y6BAE2_9HYPH (Nucleoside-diphosphate-sugar epimerase n=1 Tax=Tistlia consotensis USBA 355 TaxID=560819 RepID=A0A1Y6BAE2_9HYPH) HSP 1 Score: 213 bits (542), Expect = 3.490e-60 Identity = 135/309 (43.69%), Postives = 176/309 (56.96%), Query Frame = 1 Query: 460 LFIFGVGYVATAVALTFLRKGWTVHGTCTDPRKVKSLGDQGIKAFIFDDWSGPMMQPEPLSALASATCVLSTVPPALQSGADPVLVAHEAELQWARSKGNLRWVGYLSSTGVYGDRGGGWVTEEDEPWPAAPRTKARLKAERSWLRLHERDGLPVHVFRLAGIYGPGRSALDAVARHNGDIRLAGSDDGTMVSRTHVSDIVGVVEASIERPAPGMVLNVADDLPSTRYEARRCFALERTLAYGCKLLGFPRQDPDPAEK----------YVNRRGGGNKRVDNERMRALLAASGRSLTFPDYRSGLKAV 1356 LF FG+G+ A A+A L GW V GT DP K ++L +GI+AF+F + P+ PE +ALA + +L++ PP + DPVL AH A + + L+WVGYLS+TGVYG+R GGWV E P+ R + R+ AE +WL LH R GLPVH+FRLAGIYGPGRS LD+VA G R G + SR HV DI V+EAS+ RP PG NV DD + E +A+ LLG P P E+ Y + NKRV N R+++ L G L +PDYRSGL+A+ Sbjct: 8 LFCFGLGFSARALARRRLADGWRVAGTTRDPAKAEALAAEGIEAFVFAN-GRPLEDPE--AALAGTSHLLASAPPDAEG--DPVLAAHGAAIA---ALPGLQWVGYLSTTGVYGNRAGGWVDEASALTPSGERGRRRVAAEAAWLELHRRHGLPVHLFRLAGIYGPGRSQLDSVA--GGRARRI-VKPGQVFSRIHVEDIATVLEASMARPNPGAAYNVCDDEAADPAEV---------VAFAAALLGLPAPPAVPFEEAGLSPMAASFYED-----NKRVSNRRIKSEL---GVVLRYPDYRSGLRAL 288
BLAST of mRNA_Ecto-sp6_S_contig100.712.1 vs. uniprot
Match: A0A369TAJ2_9PROT (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Ferruginivarius sediminum TaxID=2661937 RepID=A0A369TAJ2_9PROT) HSP 1 Score: 208 bits (530), Expect = 1.580e-58 Identity = 137/310 (44.19%), Postives = 171/310 (55.16%), Query Frame = 1 Query: 460 LFIFGVGYVATAVALTFLRKGWTVHGTCTDPRKVKSLGDQGIKAFIFDDWSGPMMQPEPLSALASATCVLSTVPPALQSGADPVLVAHEAELQWARSKGNLRWVGYLSSTGVYGDRGGGWVTEEDEPWPAAPRTKARLKAERSWLRLHERDGLPVHVFRLAGIYGPGRSALDAVARHNGDIRLAGSDDGTMVSRTHVSDIVGVVEASIERPAPGMVLNVADDLPSTRYEARRCFALERTLAYGCKLLGFPRQDPDPAEKYVNRRGGG------NKRVDNERMRALLAASGRSLTFPDYRSGLKAVQEGDG 1371 LF FG+GY A +A L +GW V GT D K L G++A +FD P+ + +ALA T +LS+VPP + DPVL H ++ A G L W GYLS+TGVYG+R GGWV EE E P + R + R+ AE +WLRLH G+PVHVFRLAGIYGPGRS LDAV R R+ G + SR HV DI V++AS+ RP PG V NV DD P+ E + C+LLG P A + G NKRV N RM L G L +PDYR+GL+A+ G G Sbjct: 6 LFCFGLGYSARRLADRLLAEGWRVAGTTRDEAKAGELRAAGVEACVFDRGQ-PLA--DAATALAGTTHLLSSVPPNREG--DPVLDHHAGDI--AALAGRLAWAGYLSTTGVYGNREGGWVDEESELHPTSARAERRVAAEHAWLRLHAGQGIPVHVFRLAGIYGPGRSPLDAV-RQGRAKRI--DKPGQVFSRIHVEDIATVLQASMARPNPGRVYNVCDDEPAAPAEVTE---------HACRLLGVE-SPPLVALEDAGLSDMGKTFWQDNKRVSNRRMHEEL---GVRLAYPDYRTGLEALLGGGG 292
BLAST of mRNA_Ecto-sp6_S_contig100.712.1 vs. uniprot
Match: A0A7V7FNS9_9PROT (SDR family oxidoreductase n=2 Tax=Rhodospirillales TaxID=204441 RepID=A0A7V7FNS9_9PROT) HSP 1 Score: 205 bits (522), Expect = 2.700e-57 Identity = 131/309 (42.39%), Postives = 170/309 (55.02%), Query Frame = 1 Query: 460 LFIFGVGYVATAVALTFLRKGWTVHGTCTDPRKVKSLGDQGIKAFIFDDWSGPMMQPEPLSALASATCVLSTVPPALQSGADPVLVAHEAELQWARSKGNLRWVGYLSSTGVYGDRGGGWVTEEDEPWPAAPRTKARLKAERSWLRLHERDGLPVHVFRLAGIYGPGRSALDAVARHNGDIRLAGSDDGTMVSRTHVSDIVGVVEASIERPAPGMVLNVADDLPSTRYEARRCFALERTLAYGCKLLGFPRQDPDP------AEKYVNRRGGG----NKRVDNERMRALLAASGRSLTFPDYRSGLKAV 1356 LF FG+GY A +A GW V GTC + L QGI+AF+FD GP+ E +ALA AT +LS+VPP DPVL H ++ + L W GYLS+TGVYGD GG V EE P + R + R +AE WL L+ G+PVH+FRLAGIYGPGR+ALD V R R+ G +R HV+DI V++ S++ P PG V NV DD P+ + +AY C+LLG DP P A K ++ N+ +DN R++A L G L +PDYRSGLKA+ Sbjct: 10 LFCFGLGYCARVLAGALKADGWAVAGTCRKAEERAQLASQGIEAFLFDG-GGPL---ETAAALAGATHLLSSVPPGADG--DPVLRRHAGDIA---AVDRLEWAGYLSTTGVYGDTGGAMVDEEAPLNPTSARRRRRAEAENGWLALYGNRGVPVHIFRLAGIYGPGRNALDQV-RSGAAKRI--DAPGRRFARVHVADIAAVLKTSMQAPRPGAVYNVCDDFPAAPADV---------VAYACQLLGV---DPPPLIPFAEAAKEMSLMAQSFWRDNRCIDNSRIKAEL---GVRLGYPDYRSGLKAI 291 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.712.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig100.712.1 >prot_Ecto-sp6_S_contig100.712.1 ID=prot_Ecto-sp6_S_contig100.712.1|Name=mRNA_Ecto-sp6_S_contig100.712.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=603bp MRRPSSTSSVFLLWASLQGVDAGRSSLIAGRMAASPPGAATSGATATTLCback to top mRNA from alignment at Ecto-sp6_S_contig100:216402..222079- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig100.712.1 ID=mRNA_Ecto-sp6_S_contig100.712.1|Name=mRNA_Ecto-sp6_S_contig100.712.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5678bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:216402..222079- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:216402..222079- >mRNA_Ecto-sp6_S_contig100.712.1 ID=mRNA_Ecto-sp6_S_contig100.712.1|Name=mRNA_Ecto-sp6_S_contig100.712.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1809bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:216402..222079- (Ectocarpus species6 EcLAC_371)back to top |