mRNA_Ecto-sp6_S_contig100.709.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig100.709.1 vs. uniprot
Match: D7FKG7_ECTSI (Inorganic diphosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKG7_ECTSI) HSP 1 Score: 409 bits (1052), Expect = 4.970e-141 Identity = 211/332 (63.55%), Postives = 213/332 (64.16%), Query Frame = 1 Query: 1 GGKEISPWHDIPLKAGADTFNYVCEIPKYSLAKMEIATKEPNNPIAQVGAA*RVACGLVWCTGVSHARKALRVEATAVRCRVVEARLRQNREPSQRRCKGSMAAAHRHFRYLASSTRLGVGIKRRPSFRVDFSRRCSCRLANFRPALVPSYDTRTAFFAPPPFFQDTKKGKLRFYHGPIFWNYGYIPQTWEDPTVKHPELGVLGDGDPVDVVEIGSSKLASGAVKAIKPLGCLAMIDDGELDWKVIGIDVDDPLAKDLNDIADVEKLLPGYVSGIREWFRWYKTPDDKPLNAFGFDEKALNKEETMKVIDECNGHWKALVDGKTEAGKMWIK 996 GGKEISPWHDIPLKAGADTFNY+CEIPKYSLAKMEIATKEPNNPIAQ DTKKGKLRFYHGPIFWNYGYIPQTWEDPTVKHPELGVLGDGDPVDVVEIGS+KLASG VKAIKPLGCLAMIDDGELDWKVIGIDVDDPLAKDLNDIADVEKLLPGYVSGIREWFRWYKTPDDKPLNAFGFDEKALNKEETMKVIDECNGHWKALVDGKTEAGKMWIK Sbjct: 75 GGKEISPWHDIPLKAGADTFNYICEIPKYSLAKMEIATKEPNNPIAQ----------------------------------------------------------------------------------------------------------------------DTKKGKLRFYHGPIFWNYGYIPQTWEDPTVKHPELGVLGDGDPVDVVEIGSAKLASGTVKAIKPLGCLAMIDDGELDWKVIGIDVDDPLAKDLNDIADVEKLLPGYVSGIREWFRWYKTPDDKPLNAFGFDEKALNKEETMKVIDECNGHWKALVDGKTEAGKMWIK 288
BLAST of mRNA_Ecto-sp6_S_contig100.709.1 vs. uniprot
Match: A0A6H5KSZ1_9PHAE (Inorganic diphosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ1_9PHAE) HSP 1 Score: 362 bits (929), Expect = 7.720e-121 Identity = 167/171 (97.66%), Postives = 169/171 (98.83%), Query Frame = 1 Query: 484 PFFQDTKKGKLRFYHGPIFWNYGYIPQTWEDPTVKHPELGVLGDGDPVDVVEIGSSKLASGAVKAIKPLGCLAMIDDGELDWKVIGIDVDDPLAKDLNDIADVEKLLPGYVSGIREWFRWYKTPDDKPLNAFGFDEKALNKEETMKVIDECNGHWKALVDGKTEAGKMWIK 996 P QDTKKGKLRFYHGPIFWNYGYIPQTWEDPTVKHPELGVLGDGDPVDVVEIGS+KLASGAVKAIKPLGCLAMIDDGELDWKVIGIDVDDPLAKDLNDIADVEKLLPG+VSGIREWFRWYKTPDDKPLNAFGFDEKALNKEETMKVIDECNGHWKALVDGKTEAGKMWIK Sbjct: 220 PIAQDTKKGKLRFYHGPIFWNYGYIPQTWEDPTVKHPELGVLGDGDPVDVVEIGSAKLASGAVKAIKPLGCLAMIDDGELDWKVIGIDVDDPLAKDLNDIADVEKLLPGHVSGIREWFRWYKTPDDKPLNAFGFDEKALNKEETMKVIDECNGHWKALVDGKTEAGKMWIK 390
BLAST of mRNA_Ecto-sp6_S_contig100.709.1 vs. uniprot
Match: A0A836CKW0_9STRA (Inorganic diphosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKW0_9STRA) HSP 1 Score: 312 bits (799), Expect = 1.070e-102 Identity = 160/329 (48.63%), Postives = 182/329 (55.32%), Query Frame = 1 Query: 4 GKEISPWHDIPLKAGADTFNYVCEIPKYSLAKMEIATKEPNNPIAQVGAA*RVACGLVWCTGVSHARKALRVEATAVRCRVVEARLRQNREPSQRRCKGSMAAAHRHFRYLASSTRLGVGIKRRPSFRVDFSRRCSCRLANFRPALVPSYDTRTAFFAPPPFFQDTKKGKLRFYHGPIFWNYGYIPQTWEDPTVKHPELGVLGDGDPVDVVEIGSSKLASGAVKAIKPLGCLAMIDDGELDWKVIGIDVDDPLAKDLNDIADVEKLLPGYVSGIREWFRWYKTPDDKPLNAFGFDEKALNKEETMKVIDECNGHWKALVDGKTEAGKMW 990 GK+ISPWHDIPLK + +N+VCEIPK++ AKMEIATKEP+NPIAQ D KKG LRFYHGPIFWNYGY+PQTWEDP VKHPELGV+GDGDPVDVVEIGS+KL G++K ++ LGCLAMIDDGELDWKVI I DDPLA L+DI DVE+ PG VSGIREWFRWYKTPDDKP+N FGF E+AL+ +ET +I ECNGHWKALV GKTE GK+W Sbjct: 71 GKDISPWHDIPLKGEGELYNFVCEIPKFTKAKMEIATKEPHNPIAQ----------------------------------------------------------------------------------------------------------------------DIKKGALRFYHGPIFWNYGYLPQTWEDPNVKHPELGVMGDGDPVDVVEIGSTKLPQGSLKQVRALGCLAMIDDGELDWKVIAIAKDDPLAAKLHDIKDVEEHCPGVVSGIREWFRWYKTPDDKPVNEFGFGERALDAKETADIISECNGHWKALVAGKTEKGKLW 281
BLAST of mRNA_Ecto-sp6_S_contig100.709.1 vs. uniprot
Match: H6WB91_VAULI (Inorganic diphosphatase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB91_VAULI) HSP 1 Score: 295 bits (754), Expect = 7.000e-96 Identity = 156/329 (47.42%), Postives = 174/329 (52.89%), Query Frame = 1 Query: 4 GKEISPWHDIPLKAGADTFNYVCEIPKYSLAKMEIATKEPNNPIAQVGAA*RVACGLVWCTGVSHARKALRVEATAVRCRVVEARLRQNREPSQRRCKGSMAAAHRHFRYLASSTRLGVGIKRRPSFRVDFSRRCSCRLANFRPALVPSYDTRTAFFAPPPFFQDTKKGKLRFYHGPIFWNYGYIPQTWEDPTVKHPELGVLGDGDPVDVVEIGSSKLASGAVKAIKPLGCLAMIDDGELDWKVIGIDVDDPLAKDLNDIADVEKLLPGYVSGIREWFRWYKTPDDKPLNAFGFDEKALNKEETMKVIDECNGHWKALVDGKTEAGKMW 990 GKEISPWHDIPLKAG + +N+VCEIPK + AKMEIATKE NPIAQ D KKG LRFYHGPIFWNYGY+PQTWEDP+V+HPEL V+GDGDPVDVVEIGS K + G + IKPLGCLAMIDDGELDWKVI I DPL +LNDI DVE PG VSGIREWFRWYKTPDDKP+N FGF +ALN +ET VI ECN HWK+L+ G ++ GKMW Sbjct: 71 GKEISPWHDIPLKAGDELYNFVCEIPKNTKAKMEIATKEELNPIAQ----------------------------------------------------------------------------------------------------------------------DIKKGNLRFYHGPIFWNYGYLPQTWEDPSVEHPELSVMGDGDPVDVVEIGSKKRSEGELCQIKPLGCLAMIDDGELDWKVIAIAKGDPLFDELNDIEDVEANCPGVVSGIREWFRWYKTPDDKPVNEFGFGGRALNAKETKLVISECNEHWKSLIAGNSDKGKMW 281
BLAST of mRNA_Ecto-sp6_S_contig100.709.1 vs. uniprot
Match: W7TQS0_9STRA (Inorganic diphosphatase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQS0_9STRA) HSP 1 Score: 283 bits (723), Expect = 3.790e-91 Identity = 151/331 (45.62%), Postives = 173/331 (52.27%), Query Frame = 1 Query: 4 GKEISPWHDIPLKAGADTFNYVCEIPKYSLAKMEIATKEPNNPIAQVGAA*RVACGLVWCTGVSHARKALRVEATAVRCRVVEARLRQNREPSQRRCKGSMAAAHRHFRYLASSTRLGVGIKRRPSFRVDFSRRCSCRLANFRPALVPSYDTRTAFFAPPPFFQDTKKGKLRFYHGPIFWNYGYIPQTWEDPTVKHPELGVLGDGDPVDVVEIGSSKLASGAVKAIKPLGCLAMIDDGELDWKVIGIDVDDPLAKDLNDIADVEKLLPGYVSGIREWFRWYKTPDDKPLNAFGFDEKALNKEETMKVIDECNGHWKALVDGKTEAGKMWIK 996 G ISPWHDIPLKA TFN++ EIPK++ AKME+ATKE NPI+Q D KKGKLRFYHGPIFWNYG +PQTWEDP HPEL V GD DPVDVVEIGS+ L+ GAV +KPLG LAMIDDGELDWK+I I DP+A +LNDIADVE LPG VSGIREWFRWYKTPD KP+N FGF EKAL K + +KVIDE +G WK+L+ G+T+AGK+W K Sbjct: 73 GNTISPWHDIPLKADPQTFNFITEIPKFTKAKMEVATKEELNPISQ----------------------------------------------------------------------------------------------------------------------DMKKGKLRFYHGPIFWNYGLLPQTWEDPNHTHPELKVQGDNDPVDVVEIGSTVLSMGAVTPVKPLGVLAMIDDGELDWKIIAIAASDPMAGELNDIADVEAKLPGVVSGIREWFRWYKTPDGKPVNEFGFGEKALAKADALKVIDETHGAWKSLMSGQTDAGKLWKK 285
BLAST of mRNA_Ecto-sp6_S_contig100.709.1 vs. uniprot
Match: A0A7S1UHB8_9STRA (Inorganic diphosphatase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHB8_9STRA) HSP 1 Score: 279 bits (714), Expect = 4.350e-90 Identity = 145/329 (44.07%), Postives = 174/329 (52.89%), Query Frame = 1 Query: 7 KEISPWHDIPLKAGADTFNYVCEIPKYSLAKMEIATKEPNNPIAQVGAA*RVACGLVWCTGVSHARKALRVEATAVRCRVVEARLRQNREPSQRRCKGSMAAAHRHFRYLASSTRLGVGIKRRPSFRVDFSRRCSCRLANFRPALVPSYDTRTAFFAPPPFFQDTKKGKLRFYHGPIFWNYGYIPQTWEDPTVKHPELGVLGDGDPVDVVEIGSSKLASGAVKAIKPLGCLAMIDDGELDWKVIGIDVDDPLAKDLNDIADVEKLLPGYVSGIREWFRWYKTPDDKPLNAFGFDEKALNKEETMKVIDECNGHWKALVDGKTEAGKMWI 993 K ISPWHDIPL+AG +N V EIPKY+ AKME+ATKE NNPIAQ D KKGKLR YHGPIFWNYG +PQTWEDP ++HPEL V GD DP+DVVE+GS+ L G+V A+KP+G LAMIDDGELDWK+I I+ DP+A +++D++D+E +PG VSGIREWFRWYKTPDDKPLN FGFDEK L K + +KVI+E N WKAL +GK EAGK+W+ Sbjct: 54 KTISPWHDIPLEAGDGCYNMVTEIPKYTKAKMEVATKEENNPIAQ----------------------------------------------------------------------------------------------------------------------DMKKGKLRDYHGPIFWNYGCLPQTWEDPNIEHPELKVSGDDDPLDVVEVGSASLEMGSVTAVKPIGVLAMIDDGELDWKLIAINKADPMAAEIDDVSDLEAKMPGVVSGIREWFRWYKTPDDKPLNGFGFDEKCLPKADAIKVIEETNEQWKALKEGKVEAGKLWL 264
BLAST of mRNA_Ecto-sp6_S_contig100.709.1 vs. uniprot
Match: A0A7S1UHT4_9STRA (Inorganic diphosphatase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHT4_9STRA) HSP 1 Score: 279 bits (714), Expect = 1.900e-89 Identity = 145/329 (44.07%), Postives = 174/329 (52.89%), Query Frame = 1 Query: 7 KEISPWHDIPLKAGADTFNYVCEIPKYSLAKMEIATKEPNNPIAQVGAA*RVACGLVWCTGVSHARKALRVEATAVRCRVVEARLRQNREPSQRRCKGSMAAAHRHFRYLASSTRLGVGIKRRPSFRVDFSRRCSCRLANFRPALVPSYDTRTAFFAPPPFFQDTKKGKLRFYHGPIFWNYGYIPQTWEDPTVKHPELGVLGDGDPVDVVEIGSSKLASGAVKAIKPLGCLAMIDDGELDWKVIGIDVDDPLAKDLNDIADVEKLLPGYVSGIREWFRWYKTPDDKPLNAFGFDEKALNKEETMKVIDECNGHWKALVDGKTEAGKMWI 993 K ISPWHDIPL+AG +N V EIPKY+ AKME+ATKE NNPIAQ D KKGKLR YHGPIFWNYG +PQTWEDP ++HPEL V GD DP+DVVE+GS+ L G+V A+KP+G LAMIDDGELDWK+I I+ DP+A +++D++D+E +PG VSGIREWFRWYKTPDDKPLN FGFDEK L K + +KVI+E N WKAL +GK EAGK+W+ Sbjct: 99 KTISPWHDIPLEAGDGCYNMVTEIPKYTKAKMEVATKEENNPIAQ----------------------------------------------------------------------------------------------------------------------DMKKGKLRDYHGPIFWNYGCLPQTWEDPNIEHPELKVSGDDDPLDVVEVGSASLEMGSVTAVKPIGVLAMIDDGELDWKLIAINKADPMAAEIDDVSDLEAKMPGVVSGIREWFRWYKTPDDKPLNGFGFDEKCLPKADAIKVIEETNEQWKALKEGKVEAGKLWL 309
BLAST of mRNA_Ecto-sp6_S_contig100.709.1 vs. uniprot
Match: A0A7S2VZ53_9STRA (Inorganic diphosphatase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VZ53_9STRA) HSP 1 Score: 270 bits (690), Expect = 2.750e-86 Identity = 146/331 (44.11%), Postives = 170/331 (51.36%), Query Frame = 1 Query: 1 GGKEISPWHDIPLKAGADTFNYVCEIPKYSLAKMEIATKEPNNPIAQVGAA*RVACGLVWCTGVSHARKALRVEATAVRCRVVEARLRQNREPSQRRCKGSMAAAHRHFRYLASSTRLGVGIKRRPSFRVDFSRRCSCRLANFRPALVPSYDTRTAFFAPPPFFQDTKKGKLRFYHGPIFWNYGYIPQTWEDPTVKHPELGVLGDGDPVDVVEIGSSKLASGAVKAIKPLGCLAMIDDGELDWKVIGIDVDDPLAKDLNDIADVEKLLPGYVSGIREWFRWYKTPDDKPLNAFGFDEKALNKEETMKVIDECNGHWKALVDGKTEAGKMWI 993 G ISPWHDIPLK+ + +N V EIPK + AKME+ATKE NNPIAQ D KKG LR YHGPIFWNYG +PQTWEDP +HPEL V GD DP+DVVEIGS+ LA G+VK +KPLG +AMIDDGELDWKV+ + VDDPLA++ NDI DV + G+REWFRWYKTPDDKPLN FGFDEK LNK+ET++VIDE + W+ L DGKTEAGK+WI Sbjct: 67 GDNVISPWHDIPLKSESGAYNMVVEIPKMTKAKMEVATKEENNPIAQ----------------------------------------------------------------------------------------------------------------------DIKKGNLRDYHGPIFWNYGCLPQTWEDPNAEHPELKVFGDDDPIDVVEIGSATLAMGSVKEVKPLGVIAMIDDGELDWKVLAVAVDDPLAEEYNDIDDVPDAVK---DGVREWFRWYKTPDDKPLNGFGFDEKFLNKKETIEVIDETHEAWQKLKDGKTEAGKLWI 276
BLAST of mRNA_Ecto-sp6_S_contig100.709.1 vs. uniprot
Match: A0A8J2SRR3_9STRA (Inorganic diphosphatase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SRR3_9STRA) HSP 1 Score: 271 bits (692), Expect = 9.410e-85 Identity = 123/169 (72.78%), Postives = 136/169 (80.47%), Query Frame = 1 Query: 484 PFFQDTKKGKLRFYHGPIFWNYGYIPQTWEDPTVKHPELGVLGDGDPVDVVEIGSSKLASGAVKAIKPLGCLAMIDDGELDWKVIGIDVDDPLAKDLNDIADVEKLLPGYVSGIREWFRWYKTPDDKPLNAFGFDEKALNKEETMKVIDECNGHWKALVDGKTEAGKMW 990 P QDTKKGKLRFYHGPIFWNYG +PQTWE+P KHPELG GD DP+DVVEIGSS L +G+V +KPLG LAMIDDGELDWKVI + DPLA LNDI DVEK PGYVSGIREWFRWYKTPDDKPLNAFGFDE AL K +T++VI E + WK L DG +AGK+W Sbjct: 242 PIMQDTKKGKLRFYHGPIFWNYGCLPQTWENPNEKHPELGCFGDDDPIDVVEIGSSALEAGSVTPVKPLGVLAMIDDGELDWKVIAVATSDPLASKLNDIDDVEKECPGYVSGIREWFRWYKTPDDKPLNAFGFDEAALPKAKTVEVIAETHAAWKGLRDGSIDAGKLW 410
BLAST of mRNA_Ecto-sp6_S_contig100.709.1 vs. uniprot
Match: A0A7S2YMF8_9STRA (Inorganic diphosphatase n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YMF8_9STRA) HSP 1 Score: 266 bits (679), Expect = 1.070e-84 Identity = 145/329 (44.07%), Postives = 166/329 (50.46%), Query Frame = 1 Query: 7 KEISPWHDIPLKAGADTFNYVCEIPKYSLAKMEIATKEPNNPIAQVGAA*RVACGLVWCTGVSHARKALRVEATAVRCRVVEARLRQNREPSQRRCKGSMAAAHRHFRYLASSTRLGVGIKRRPSFRVDFSRRCSCRLANFRPALVPSYDTRTAFFAPPPFFQDTKKGKLRFYHGPIFWNYGYIPQTWEDPTVKHPELGVLGDGDPVDVVEIGSSKLASGAVKAIKPLGCLAMIDDGELDWKVIGIDVDDPLAKDLNDIADVEKLLPGYVSGIREWFRWYKTPDDKPLNAFGFDEKALNKEETMKVIDECNGHWKALVDGKTEAGKMWI 993 K ISPWHDI LK ++N V EIPK + AKME+ATKE NNPIAQ D KKGKLR YHGPIFWNYG +PQTWEDPTVKHPELG GD DP+DVVEIGS+ L+ G++K +KPLG LAMIDDGELDWKV+ I DDPLA++ NDI DV + G+REWFRWYKTPDDKP+N FGFDEK L+K E +KVIDE N W L G+TEAGK+WI Sbjct: 64 KPISPWHDIALKNDDGSYNMVVEIPKMTKAKMEVATKEENNPIAQ----------------------------------------------------------------------------------------------------------------------DMKKGKLRDYHGPIFWNYGCLPQTWEDPTVKHPELGCFGDDDPIDVVEIGSASLSMGSIKPVKPLGVLAMIDDGELDWKVLAIATDDPLAEEWNDIDDVPAAIK---DGVREWFRWYKTPDDKPINEFGFDEKYLDKAEALKVIDETNEAWAKLKSGETEAGKLWI 271 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.709.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig100.709.1 >prot_Ecto-sp6_S_contig100.709.1 ID=prot_Ecto-sp6_S_contig100.709.1|Name=mRNA_Ecto-sp6_S_contig100.709.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=232bp MAAAHRHFRYLASSTRLGVGIKRRPSFRVDFSRRCSCRLANFRPALVPSYback to top mRNA from alignment at Ecto-sp6_S_contig100:189238..192391- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig100.709.1 ID=mRNA_Ecto-sp6_S_contig100.709.1|Name=mRNA_Ecto-sp6_S_contig100.709.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3154bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:189238..192391- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:189238..192391- >mRNA_Ecto-sp6_S_contig100.709.1 ID=mRNA_Ecto-sp6_S_contig100.709.1|Name=mRNA_Ecto-sp6_S_contig100.709.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=696bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:189238..192391- (Ectocarpus species6 EcLAC_371)back to top |