mRNA_Ecto-sp6_S_contig10.661.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.661.1 vs. uniprot
Match: A0A6H5JM75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM75_9PHAE) HSP 1 Score: 229 bits (585), Expect = 9.960e-72 Identity = 106/118 (89.83%), Postives = 113/118 (95.76%), Query Frame = 1
Query: 1 MSNPLTQPDIVFRLMEFVGGEQYLFFAGVSRTWRDPWKGRPTTTRAVTANTGVPQLSQSFECGLAPRSTVCRDIASLGRLDLLVSAREEHECPWDEDTCSYASENGHADVLRWAFANG 354
M NPL QPDIVFRLMEFVGGEQY+FFAGVSRTWRD W+GRPTTTRA TA+TGVPQLSQSF+CGLAPRSTVCRDIA+LGRLDLLVSARE+HECPWDE+TCS ASENGHADVLRWAFANG
Sbjct: 1 MPNPLMQPDIVFRLMEFVGGEQYIFFAGVSRTWRDAWEGRPTTTRAFTADTGVPQLSQSFKCGLAPRSTVCRDIAALGRLDLLVSAREQHECPWDEETCSCASENGHADVLRWAFANG 118
BLAST of mRNA_Ecto-sp6_S_contig10.661.1 vs. uniprot
Match: D7G8W5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8W5_ECTSI) HSP 1 Score: 209 bits (531), Expect = 3.590e-63 Identity = 97/104 (93.27%), Postives = 102/104 (98.08%), Query Frame = 1
Query: 43 MEFVGGEQYLFFAGVSRTWRDPWKGRPTTTRAVTANTGVPQLSQSFECGLAPRSTVCRDIASLGRLDLLVSAREEHECPWDEDTCSYASENGHADVLRWAFANG 354
MEFVGGEQYLFFAGVSRTWRD W+GRPTTTRAVTA+TGVPQLSQSFECGLA RSTVC+DIA+LGRLDLLVSAREE+ECPWDEDTCSYASENGHADVLRWAFANG
Sbjct: 1 MEFVGGEQYLFFAGVSRTWRDAWEGRPTTTRAVTADTGVPQLSQSFECGLARRSTVCQDIAALGRLDLLVSAREEYECPWDEDTCSYASENGHADVLRWAFANG 104
BLAST of mRNA_Ecto-sp6_S_contig10.661.1 vs. uniprot
Match: A0A6H5L0J7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0J7_9PHAE) HSP 1 Score: 109 bits (273), Expect = 2.590e-25 Identity = 55/91 (60.44%), Postives = 63/91 (69.23%), Query Frame = 1
Query: 25 DIVFRLMEFVGGEQYLFFAGVSRTWRDPWKGRPTTTRAVTANTGVPQLSQSFECGLAPRSTVCRDIASLGRLDLLVSAREEHECPWDEDTC 297
DIV + EFV QYLFFA VSR WRD W RPT T+A+TA+T VPQLS SFECGL + VC +A LGRLDLL AR C W+E+TC
Sbjct: 8 DIVSTVAEFVDDNQYLFFASVSRGWRDVWGKRPTVTKALTADTSVPQLSLSFECGLRRTAAVCETVAGLGRLDLLRRARAMG-CQWNENTC 97
BLAST of mRNA_Ecto-sp6_S_contig10.661.1 vs. uniprot
Match: A0A6H5L0K8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0K8_9PHAE) HSP 1 Score: 107 bits (268), Expect = 4.290e-24 Identity = 53/86 (61.63%), Postives = 61/86 (70.93%), Query Frame = 1
Query: 40 LMEFVGGEQYLFFAGVSRTWRDPWKGRPTTTRAVTANTGVPQLSQSFECGLAPRSTVCRDIASLGRLDLLVSAREEHECPWDEDTC 297
L EFV Q+LFFA VSR WRD W RPT T+A+TA+T VPQLS SFECGL + VC +A LGRLDLL AR CPW+E+TC
Sbjct: 31 LAEFVDDNQHLFFASVSRGWRDVWGKRPTVTKALTADTSVPQLSLSFECGLRRTAAVCETVAGLGRLDLLQRARAMG-CPWNENTC 115
BLAST of mRNA_Ecto-sp6_S_contig10.661.1 vs. uniprot
Match: D7FMS7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS7_ECTSI) HSP 1 Score: 108 bits (271), Expect = 5.600e-24 Identity = 55/91 (60.44%), Postives = 63/91 (69.23%), Query Frame = 1
Query: 25 DIVFRLMEFVGGEQYLFFAGVSRTWRDPWKGRPTTTRAVTANTGVPQLSQSFECGLAPRSTVCRDIASLGRLDLLVSAREEHECPWDEDTC 297
DIV + EFV QYLFFA VSR WRD W RPT T+A+TA+T V QLS SFECGL + VC +A LGRLDLL AR CPW+E+TC
Sbjct: 10 DIVSTVGEFVDDNQYLFFASVSRGWRDVWGKRPTVTKALTADTSVSQLSLSFECGLRRTAAVCETVAGLGRLDLLRRARAMG-CPWNENTC 99
BLAST of mRNA_Ecto-sp6_S_contig10.661.1 vs. uniprot
Match: D7G8V2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8V2_ECTSI) HSP 1 Score: 107 bits (268), Expect = 5.060e-23 Identity = 53/93 (56.99%), Postives = 65/93 (69.89%), Query Frame = 1
Query: 19 QPDIVFRLMEFVGGEQYLFFAGVSRTWRDPWKGRPTTTRAVTANTGVPQLSQSFECGLAPRSTVCRDIASLGRLDLLVSAREEHECPWDEDTC 297
Q D+ L+EFV EQ+LFFAGV R W++ W RP TTRAVT +T V QLSQ+F+CGL+ + VC +A LGRLDLL AR H C W+E TC
Sbjct: 8 QSDVASCLVEFVDYEQFLFFAGVCRAWKEAWGQRPPTTRAVTEDTTVAQLSQNFQCGLSLIADVCTSVAKLGRLDLLQCARR-HGCAWNEVTC 99
BLAST of mRNA_Ecto-sp6_S_contig10.661.1 vs. uniprot
Match: D8LDD9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDD9_ECTSI) HSP 1 Score: 98.6 bits (244), Expect = 1.470e-20 Identity = 53/101 (52.48%), Postives = 65/101 (64.36%), Query Frame = 1
Query: 1 MSNPL-TQPDIVFRLMEFVGGEQYLFFAGVSRTWRDPWKGRPTTTRAVTANTGVPQLSQSFECGLAPRST-VCRDIASLGRLDLLVSAREEHECPWDEDTC 297
M NP D++ EFV +Q+LFFA VSR WR W+GRPT+TRA+T +T QL S +CGL+P T VC IASLGRLDLL +AR WD+ TC
Sbjct: 1 MGNPFQATADVISHASEFVHDDQFLFFASVSRAWRGAWRGRPTSTRAITPDTSPSQLRHSVDCGLSPGGTAVCTAIASLGRLDLLRAARALG-FRWDKMTC 100
BLAST of mRNA_Ecto-sp6_S_contig10.661.1 vs. uniprot
Match: D7FH49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH49_ECTSI) HSP 1 Score: 78.2 bits (191), Expect = 9.770e-13 Identity = 49/102 (48.04%), Postives = 58/102 (56.86%), Query Frame = 1
Query: 13 LTQPDIVFRLMEFVGGEQYLFFAGVSRTWRDPWKGRPTTTRAVTANTGVPQLSQSFECGLAPRSTV--CRDIASLGRLDLLVSAREEHECPWDEDTCSYASE 312
+T DIV L +FV +Q+LFFA VSR+WRD W R T T VT +T QL SF CGLA R V C A G LDLL A E+ CPW + A+E
Sbjct: 20 MTNMDIVHGLAQFVLDKQFLFFAAVSRSWRDAWGERATVTSWVTPHTTPFQLQYSFACGLA-RDGVDWCLTTARAGNLDLLRWATEQG-CPWTRSLSAAAAE 119
BLAST of mRNA_Ecto-sp6_S_contig10.661.1 vs. uniprot
Match: A0A6H5KPZ6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPZ6_9PHAE) HSP 1 Score: 74.3 bits (181), Expect = 8.810e-12 Identity = 44/96 (45.83%), Postives = 57/96 (59.38%), Query Frame = 1
Query: 25 DIVFRLMEFVGGEQYLFFAGVSRTWRDPWKGRPTTTRAVTANTGVPQLSQSFECGLA-PRSTVCRDIASLGRLDLLVSAREEHECPWDEDTCSYAS 309
D++ ++ FV +Q+LFFA VSR WR+ W RP T VT ++ V QL SFE GL R +C IA LG L+LL SAR C W+ T S A+
Sbjct: 62 DLLRSIVRFVAEKQFLFFAPVSRAWREAWGCRPAVTSWVTEDSSVSQLRYSFERGLPRDRPELCAAIARLGNLELLRSARGSG-CAWNGLTFSEAA 156 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.661.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig10.661.1 >prot_Ecto-sp6_S_contig10.661.1 ID=prot_Ecto-sp6_S_contig10.661.1|Name=mRNA_Ecto-sp6_S_contig10.661.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=285bp MSNPLTQPDIVFRLMEFVGGEQYLFFAGVSRTWRDPWKGRPTTTRAVTANback to top mRNA from alignment at Ecto-sp6_S_contig10:2517211..2518065+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig10.661.1 ID=mRNA_Ecto-sp6_S_contig10.661.1|Name=mRNA_Ecto-sp6_S_contig10.661.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=855bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:2517211..2518065+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig10:2517211..2518065+ >mRNA_Ecto-sp6_S_contig10.661.1 ID=mRNA_Ecto-sp6_S_contig10.661.1|Name=mRNA_Ecto-sp6_S_contig10.661.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=855bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:2517211..2518065+ (Ectocarpus species6 EcLAC_371)back to top |