mRNA_Ecto-sp6_S_contig10.655.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.655.1 vs. uniprot
Match: D7G8V8_ECTSI (Fibronectin type-III domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8V8_ECTSI) HSP 1 Score: 565 bits (1456), Expect = 5.440e-190 Identity = 300/323 (92.88%), Postives = 301/323 (93.19%), Query Frame = 2
Query: 2 YALRLLNDAGVFSDRVSGMHFITLGTPHLGSLLSGGGMAGRVMDNETKEQLFFKDTDMRRDGDNGGVSREEYGVGGSAGAGGARGGGSGYYPGAPPSYMGAEGVGRNMNSNHSLGGSRPPVLARMTGEDFLAPLRMFQRRVLYANAKMDGTVEYPSASVRIDDPYVYVPDTDLSRMCSPHYTHVMANSSKGNLGGMDPAVARGPGGGFPTALASAAPESGMWEIMAQVLDSLGWERVDIFNPEGMSPYKDLVVVNQWLNSEGTDIVRHLVDNSPNKPAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDVAEGAVEAGDA 970
YALRLLNDAGVFSDRVSGMHFITLGTPHLGSLLSGGGMAGRVMDNETKEQLFFKDTDMRRDGDNGGVSREEYGVGGSAGAGGARGGGSGYYPGAPPSYMGAEGVGRNMNSNHSLGGSRPPVLARMTGEDFLAPLRMFQRRVLYAN KMDGTVEYPSASVRIDDPYVYVPDTDLSRMCSPHYTHVMANSSKGNLGGMDPAVARGPGGGFPTALAS+APESGMWEIMAQVLDSLGWERVDIFNPEGMSPYKDLVVVNQWLNSEGTDIVRHLVDNSPNKPAE XXXXXXXXXXX DVAEGAVEAGDA
Sbjct: 275 YALRLLNDAGVFSDRVSGMHFITLGTPHLGSLLSGGGMAGRVMDNETKEQLFFKDTDMRRDGDNGGVSREEYGVGGSAGAGGARGGGSGYYPGAPPSYMGAEGVGRNMNSNHSLGGSRPPVLARMTGEDFLAPLRMFQRRVLYANVKMDGTVEYPSASVRIDDPYVYVPDTDLSRMCSPHYTHVMANSSKGNLGGMDPAVARGPGGGFPTALASSAPESGMWEIMAQVLDSLGWERVDIFNPEGMSPYKDLVVVNQWLNSEGTDIVRHLVDNSPNKPAEEXXXXXXXXXXXKGAVVEDLISGFDDDEDEDGDVAEGAVEAGDA 597
BLAST of mRNA_Ecto-sp6_S_contig10.655.1 vs. uniprot
Match: A0A6H5KZX8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZX8_9PHAE) HSP 1 Score: 466 bits (1199), Expect = 3.060e-156 Identity = 231/242 (95.45%), Postives = 235/242 (97.11%), Query Frame = 2
Query: 113 MAGRVMDNETKEQLFFKDTDMRRDGDNGGVSREEYGVGGSAGAGGARGGGSGYYPGAPPSYMGAEGVGRNMNSNHSLGGSRPPVLARMTGEDFLAPLRMFQRRVLYANAKMDGTVEYPSASVRIDDPYVYVPDTDLSRMCSPHYTHVMANSSKGNLGGMDPAVARGPGGGFPTALASAAPESGMWEIMAQVLDSLGWERVDIFNPEGMSPYKDLVVVNQWLNSEGTDIVRHLVDNSPNKPAE 838
MAGRVMDNETKEQL FKDTDMRR+GD+GGVSREEYGVGG G+GGARGGGSGYYPGAPPSYMGAEGV RN N+NHSLGGSRPPVLARMTGEDFLAPLRMFQRRVLYAN KMDGTVEYPSASVRIDDPYVYVPDTDLSRMCSPHYTHVMANSSKGNLGGMDPAVARGPGGGFPTALASAAPESGMWEIMAQVLDSLGWERVDIFNPEGMSPYKDLVVVNQWLNSEGTDIVRHLVDNSPNKP E
Sbjct: 1 MAGRVMDNETKEQLLFKDTDMRRNGDSGGVSREEYGVGGYGGSGGARGGGSGYYPGAPPSYMGAEGVSRNTNNNHSLGGSRPPVLARMTGEDFLAPLRMFQRRVLYANVKMDGTVEYPSASVRIDDPYVYVPDTDLSRMCSPHYTHVMANSSKGNLGGMDPAVARGPGGGFPTALASAAPESGMWEIMAQVLDSLGWERVDIFNPEGMSPYKDLVVVNQWLNSEGTDIVRHLVDNSPNKPVE 242
BLAST of mRNA_Ecto-sp6_S_contig10.655.1 vs. uniprot
Match: A0A835YY83_9STRA (Putative serine esterase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY83_9STRA) HSP 1 Score: 149 bits (375), Expect = 3.010e-36 Identity = 98/277 (35.38%), Postives = 134/277 (48.38%), Query Frame = 2
Query: 2 YALRLLNDAGVFSDRVSGMHFITLGTPHLGSLLSGGGMAGRVMDNETKEQLFFKDTDMRRDGDNGGVSREEYGVGGSAGAGGARGGGSGYYPGAPPSYMGAEGVGRNMNSNHSLGGSRPPVLARMTGEDFLAPLRMFQRRVLYANAKMDGTVEYPSASVRIDDPYVYVPDTDLSRMCSPHYTHVMANS---SKGNLG-GMDPAVARGPGGGFPTALASAAPESGMWEIMAQVLDSLGWERVDIFNPEGMSPYKDLVVVNQWLNSEGTDIVRHLVDNS 820
+AL+ L + GV R+S ++FIT GTPHLG+L S G+ G +++ T QL KD D E +G RPP+L M +++A L F R LYAN + D +E SAS+R+DDPY+ + D L+ +P YTHV+ ++ + N G G P F LA + +WE AQ L +GW RVDI+NP+G+SP+KDLVV WLN EG DIVRH VD +
Sbjct: 74 FALKRLYERGVLGGRLSPINFITFGTPHLGTLTSAAGVMGALIEGRTSAQLKLKDGD------------ERFG--------------------------------------------RPPLLVEMCNREYVAALGRFAVRKLYANVRFDS-MELYSASIRLDDPYMGLSDMQLAARITPQYTHVLVDAEDHAAANAGAGQQQRQVVAP---FRPQLAGQLSDRRIWEDGAQALMDIGWLRVDIYNPKGLSPHKDLVVATVWLNKEGMDIVRHCVDTA 290
BLAST of mRNA_Ecto-sp6_S_contig10.655.1 vs. uniprot
Match: A0A835Q8I5_VANPL (DUF676 domain-containing protein n=3 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835Q8I5_VANPL) HSP 1 Score: 70.1 bits (170), Expect = 6.250e-9 Identity = 56/166 (33.73%), Postives = 79/166 (47.59%), Query Frame = 2
Query: 353 RPPVLARMTGE----DFLAPLRMFQRRVLYANAKMDGTVEYPSASVR----IDDPYVYVPDTDLSRMCSPHYTHVMANSSKGNLGGMDPAVARGPGGGFPTALASAAPESGMWEIMAQVLDSLGWERVDI-FNPEGMS--PYKDLVVVNQWLNSEGTDIVRHLVDN 817
RPP+L RM + FL+ LR F+RRV YANA D V + ++S+R + ++ VPD PH V K N G D V G + + E+M Q L + WERVD+ F G + + V + WLNS+G D+V H++DN
Sbjct: 243 RPPLLLRMVDDCDDIKFLSALRTFKRRVAYANANYDYMVGWRTSSIRRQQELPKYHLLVPDDKY-----PHIVWV----DKRNKGSTDGEVLSDVEG----------QKYDLEEMMIQGLTQVPWERVDVSFKKSGQRYIAHNTIQVKSYWLNSDGADVVSHMIDN 389
BLAST of mRNA_Ecto-sp6_S_contig10.655.1 vs. uniprot
Match: A0A5D2TTS6_GOSMU (DUF676 domain-containing protein n=4 Tax=Gossypium TaxID=3633 RepID=A0A5D2TTS6_GOSMU) HSP 1 Score: 69.7 bits (169), Expect = 6.870e-9 Identity = 51/164 (31.10%), Postives = 83/164 (50.61%), Query Frame = 2
Query: 353 RPPVLARMT--GED--FLAPLRMFQRRVLYANAKMDGTVEYPSASVRIDDPYVYVPDTDLSRMCSPHYTHVM--ANSSKGNLGGMDPAVARGPGGGFPTALASAAPESGMWEIMAQVLDSLGWERVDIFNPEGMSPY---KDLVVVNQWLNSEGTDIVRHLVDN 817
+PP+L RM G+D F++ L F+RRV YANA D V + ++S+R + +P ++L + Y HV+ + + ++A S S + E+M Q L+ + WERVD+ + Y + V + WLNS+GTD+V H++DN
Sbjct: 211 KPPLLLRMVDDGDDLKFISALHAFKRRVAYANANYDHMVGWRTSSIRRQNE---LPKSNLL-VLDEKYPHVVYIERETTSKIQNKASSIA-----------GSQTSTSDVEEVMIQGLNQVSWERVDVSFQKSKQRYVAHNTIQVKSYWLNSDGTDVVYHMIDN 359
BLAST of mRNA_Ecto-sp6_S_contig10.655.1 vs. uniprot
Match: UPI00192996FE (uncharacterized protein LOC120268897 isoform X1 n=2 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI00192996FE) HSP 1 Score: 70.1 bits (170), Expect = 7.310e-9 Identity = 51/165 (30.91%), Postives = 80/165 (48.48%), Query Frame = 2
Query: 353 RPPVLARMTGED---FLAPLRMFQRRVLYANAKMDGTVEYPSASVR----IDDPYVYVPDTDLSRMCSPHYTHVMANSSKGNLGGMDPAVARGPGGGFPTALASAAPESGMWEIMAQVLDSLGWERVDIFNPEGMSPY---KDLVVVNQWLNSEGTDIVRHLVDN 817
+PP+L RM G+D F + L+ F+RRV YANA D V + ++S+R + ++ V D + PH +V +++ + G DP +S + E M + L L WERVD+ Y + V + WLNS+G D+V H++DN
Sbjct: 275 KPPLLIRMAGDDDIKFRSALKSFKRRVAYANANFDHMVGWRTSSIRRQHELPKYHLLVADENY-----PHIVYVDKGNAQSSCG--DPISDL------------EVHKSDLEEDMIRGLTQLNWERVDVSFQNSKQRYIAHNTIQVKSYWLNSDGADVVSHMIDN 420
BLAST of mRNA_Ecto-sp6_S_contig10.655.1 vs. uniprot
Match: UPI0019244061 (LOW QUALITY PROTEIN: putative lipase ROG1 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=UPI0019244061) HSP 1 Score: 69.7 bits (169), Expect = 8.490e-9 Identity = 50/165 (30.30%), Postives = 83/165 (50.30%), Query Frame = 2
Query: 353 RPPVLARMTGE----DFLAPLRMFQRRVLYANAKMDGTVEYPSASVRIDD--PYV-YVPDTDLSRMCSPHYTHVMANSSKGNLGGMDPAVARGPGGGFPTALASAAPESGMWEIMAQVLDSLGWERVDIF---NPEGMSPYKDLVVVNQWLNSEGTDIVRHLVDN 817
+PP+L RM + F++ L+ F+RRV+YANA D V + ++S+R D P + ++P D Y HV+ N G +D A + + M E M + L + WERVD++ + + + + + V N W NS+G D+V+H++DN
Sbjct: 245 KPPILLRMASDCEDLKFMSALQSFRRRVVYANASFDHIVGWSTSSLRRRDELPEIKHIPRGDK-------YPHVV-NVETGKTDTLDEVPYE--------AKINGTEKMNMEEEMIRGLTKMSWERVDVYFKGSKQRLLAHLAIQVRNSWFNSDGADVVQHMIDN 393
BLAST of mRNA_Ecto-sp6_S_contig10.655.1 vs. uniprot
Match: A0A5J5UPH9_GOSBA (DUF676 domain-containing protein n=4 Tax=Gossypium TaxID=3633 RepID=A0A5J5UPH9_GOSBA) HSP 1 Score: 69.3 bits (168), Expect = 9.660e-9 Identity = 51/164 (31.10%), Postives = 83/164 (50.61%), Query Frame = 2
Query: 353 RPPVLARMT--GED--FLAPLRMFQRRVLYANAKMDGTVEYPSASVRIDDPYVYVPDTDLSRMCSPHYTHVM--ANSSKGNLGGMDPAVARGPGGGFPTALASAAPESGMWEIMAQVLDSLGWERVDIFNPEGMSPY---KDLVVVNQWLNSEGTDIVRHLVDN 817
+PP+L RM G+D F++ L F+RRV YANA D V + ++S+R + +P ++L + Y HV+ + + ++A S S + E+M Q L+ + WERVD+ + Y + V + WLNS+GTD+V H++DN
Sbjct: 219 KPPLLLRMVDDGDDLKFISALHAFKRRVAYANANYDHMVGWRTSSIRRQNE---LPKSNLL-VLDEKYPHVVYIERETTSKIQNKASSIA-----------GSQTSTSDVEEVMIQGLNQVSWERVDVSFQKSKQRYVAHNTIQVKSYWLNSDGTDVVFHMIDN 367
BLAST of mRNA_Ecto-sp6_S_contig10.655.1 vs. uniprot
Match: A0A5J4ZY66_9ASTE (DUF676 domain-containing protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J4ZY66_9ASTE) HSP 1 Score: 69.7 bits (169), Expect = 1.000e-8 Identity = 50/162 (30.86%), Postives = 79/162 (48.77%), Query Frame = 2
Query: 353 RPPVLARMTGED----FLAPLRMFQRRVLYANAKMDGTVEYPSASVRIDDPYVYVPDTDLSRMCSPHYTHVMANSSKGNLGGMDPAVARGPGGGFPTALASAAPESGMWEIMAQVLDSLGWERVDIFNPEGMSPY---KDLVVVNQWLNSEGTDIVRHLVDN 817
RPP+L +M + F++ LR F+RRV YANA D V + ++S+R +P +DL + Y H++ + LG + A + S + E+M Q L + WERVD+ + Y + V + WLNS+G D+V H++DN
Sbjct: 281 RPPLLLQMVNDSDDLKFMSALRSFRRRVAYANANYDHVVGWRTSSIRRQ---CELPKSDLL-VRDEKYPHIVYVEPETTLGIQNKASS-----------VVGKQTSDLEEVMIQGLTQVPWERVDVSFHKSRQRYVAHTTIQVKSYWLNSDGADVVLHMIDN 427
BLAST of mRNA_Ecto-sp6_S_contig10.655.1 vs. uniprot
Match: A0A6P5GQ92_ANACO (uncharacterized protein LOC109723983 isoform X2 n=5 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5GQ92_ANACO) HSP 1 Score: 69.7 bits (169), Expect = 1.020e-8 Identity = 53/168 (31.55%), Postives = 77/168 (45.83%), Query Frame = 2
Query: 347 GSRPPVLARMTGE----DFLAPLRMFQRRVLYANAKMDGTVEYPSASVR----IDDPYVYVPDTDLSRMCSPHYTHVMANSSKGNLGGMDPAVARGPGGGFPTALASAAPESGMWEIMAQVLDSLGWERVDIFNPEGMSPY---KDLVVVNQWLNSEGTDIVRHLVDN 817
G RPP+L RM + F + LR F+RRV YANA D V + ++S+R + + V D PH HV KGN +A A + E+M + L + WERVD+ + Y + V + WLNS+GTD++ H++DN
Sbjct: 286 GGRPPLLVRMVDDCDDIKFRSALRSFKRRVAYANANFDHMVGWRTSSIRRQHELPKHRLLVHDEKY-----PHIVHV----DKGNAENNHKVLAD-----------VRAQTHDLEEVMIRGLTQVSWERVDVSFEKSRQRYVAHNTIQVKSYWLNSDGTDVICHMIDN 433 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.655.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig10.655.1 >prot_Ecto-sp6_S_contig10.655.1 ID=prot_Ecto-sp6_S_contig10.655.1|Name=mRNA_Ecto-sp6_S_contig10.655.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=306bp MHFITLGTPHLGSLLSGGGMAGRVMDNETKEQLFFKDTDMRRDGDNGGVSback to top mRNA from alignment at Ecto-sp6_S_contig10:2436048..2440933+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig10.655.1 ID=mRNA_Ecto-sp6_S_contig10.655.1|Name=mRNA_Ecto-sp6_S_contig10.655.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4886bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:2436048..2440933+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig10:2436048..2440933+ >mRNA_Ecto-sp6_S_contig10.655.1 ID=mRNA_Ecto-sp6_S_contig10.655.1|Name=mRNA_Ecto-sp6_S_contig10.655.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=918bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:2436048..2440933+ (Ectocarpus species6 EcLAC_371)back to top |