mRNA_Ecto-sp6_S_contig10.637.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.637.1 vs. uniprot
Match: A0A6H5KMD6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMD6_9PHAE) HSP 1 Score: 828 bits (2138), Expect = 1.100e-294 Identity = 462/517 (89.36%), Postives = 473/517 (91.49%), Query Frame = 1
Query: 1 MVTDERGTPRQAARTRRRCKPFATA----ADGAGLGSNGRGRSTSTLATVFVLLVASLRAPTCQGFVAPLATRTAIRGGTAIIGGTSIARVVVDKEART-RLSRLRVRGGGYSLAMSAGLPAAVSSMINPVVVKASARAVSELLCCCVLGVVAAKKGILTPVNVAALSKIVYGIFLPSLLMVNVAKTCVSQSVASLLPIPAFAGIQIALGLAISGVAMRLLRINPDTEAGREAKVCMAFQNSGILPLIFLNAMFRGSPELLSRGVAYASFYLMGWSPTFWTIGNNILTGHLHQG------KGGXXXXXXXXEDDVAAVPKAKLSLSKRVANLPSKVKSITESPAVRRVLSPPIVACMTGLLIGLSPPLRWLLMREGAPLGPMWSAFSNLTAAYTPSGVLVLAGSLANCPPGKWFSRDTQKTILAVGMARWFLLPLVTSGLLFGGVKYGLVPPDPMLLLVLLIESCMPSAQNSVIMLQVAGLQDEAGRNARTLCTLYLISIVPVSILLTVFISALKLV 1518
MVT ERGTP+QAAR RRRCKP A A AD A G+NGR RSTSTLA VFVLLVASLRAP+CQGFVAPLATRT IRG T I GG S+ARVVVDKEART +L RLRV GGG+SL MSAGLPAAVSSMINPVVVKAS RAVSELLCCCVLGVVAAKKGILTPVNVAALSKIVYGIFLPSLLMVNVAKTCVSQSVASLLPIPAFAGIQ+ALGLAIS VAMRLLRINPDTEAGREAKVCMAFQNSGILPLIFLNAMFRGSPELLSRGVAYASFYLMGWSPTFWTIGNNILTGHLHQ XXXXXXXX VAAVPKAKLSLSKRVANLPSKVKSI ESP VRRVLSPPIVACM GL+IGLSPPLRWLLMREGAPLGPMWSAFSNLTAAYTPSGVLVLAGSLANCPPGKWFSRDTQKTILAVGMARWFLLPL TSGLLFGGVKYGLVPPDPMLL VLLIESCMPSAQN+VIMLQVAGLQ+ AGR ARTLCTLYLISIVPVSILLTVFI+ALKLV
Sbjct: 8 MVTAERGTPQQAARPRRRCKPAAAAGTAAADRASFGANGRRRSTSTLAAVFVLLVASLRAPSCQGFVAPLATRTGIRGWTGIRGGPSLARVVVDKEARTTKLGRLRVPGGGHSLTMSAGLPAAVSSMINPVVVKASTRAVSELLCCCVLGVVAAKKGILTPVNVAALSKIVYGIFLPSLLMVNVAKTCVSQSVASLLPIPAFAGIQVALGLAISEVAMRLLRINPDTEAGREAKVCMAFQNSGILPLIFLNAMFRGSPELLSRGVAYASFYLMGWSPTFWTIGNNILTGHLHQDGXXXXXXXXXXXXXXXXXXXVAAVPKAKLSLSKRVANLPSKVKSIAESPTVRRVLSPPIVACMMGLVIGLSPPLRWLLMREGAPLGPMWSAFSNLTAAYTPSGVLVLAGSLANCPPGKWFSRDTQKTILAVGMARWFLLPLATSGLLFGGVKYGLVPPDPMLLFVLLIESCMPSAQNTVIMLQVAGLQEAAGRKARTLCTLYLISIVPVSILLTVFIAALKLV 524
BLAST of mRNA_Ecto-sp6_S_contig10.637.1 vs. uniprot
Match: A0A836CLT3_9STRA (Auxin efflux carrier n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLT3_9STRA) HSP 1 Score: 380 bits (976), Expect = 1.690e-121 Identity = 209/390 (53.59%), Postives = 270/390 (69.23%), Query Frame = 1
Query: 367 INPVVVKASARAVSELLCCCVLGVVAAKKGILTPVNVAALSKIVYGIFLPSLLMVNVAKTCVSQSVASLLPIPAFAGIQIALGLAISGVAMRLLRINPDTEAGREAKVCMAFQNSGILPLIFLNAMFRGSPE--LLSRGVAYASFYLMGWSPTFWTIGNNILTGHLHQGKGGXXXXXXXXEDDVAAVPKAKLSLSKRVANLP-----SKVKSITESPAVRRVLSPPIVACMTGLLIGLSPPLRWLLMREGAPLGPMWSAFSNLTAAYTPSGVLVLAGSLANCPPGKWFSRDTQKTILAVGMARWFLLPLVTSGLLFGGVKYGLVPPDPMLLLVLLIESCMPSAQNSVIMLQVAGLQDEAGRNARTLCTLYLISIVPVSILLTVFISALKL 1515
+ P VV +S RAV+ELL CCV GV AAKKG+LTP NV+ALS+IVY IFLPSLL+VNVA+T +SQ +++LLPIP FA QI +G I+ + M++LRI P TE GRE +VC AF NSGILPL+F+NA+FR P+ +L R +AY SF+LMGWSP FWT+G LT + E +AA A + S+ SK ++ SPA++R+LSPPIVAC+ GL +G+S PLRWLL APL +W++ L AAYTPSG+LVLAGSLAN P +++ T K I A+ MARW LLP+ T LL G VK +VP DP LL VL++E+ MP AQNSVI+LQV+GL++ AGR AR+LC YL+ ++P+S LLTVF+ A L
Sbjct: 6 LQPTVVASSVRAVAELLTCCVFGVTAAKKGVLTPTNVSALSQIVYNIFLPSLLLVNVAETAISQPLSTLLPIPLFAWAQIFIGYKIARLTMKVLRIEPTTEEGREVQVCSAFGNSGILPLLFVNALFRAHPDPTVLPRAIAYISFFLMGWSPAFWTVGYRTLTTGIEP--------ENEEEPALAAGSTATAAGSQXXXXXXXXQALSKAQTALASPALKRILSPPIVACLVGLTVGISSPLRWLLTDSNAPLAFLWNSIKVLAAAYTPSGILVLAGSLANAKPQNIWTKATAKKIAAISMARWLLLPIATGALLLGCVKARIVPRDPALLFVLMMEAAMPPAQNSVIILQVSGLRNAAGRIARSLCIFYLVGVLPISALLTVFLQACGL 387
BLAST of mRNA_Ecto-sp6_S_contig10.637.1 vs. uniprot
Match: W7TA92_9STRA (Auxin efflux carrier-like protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TA92_9STRA) HSP 1 Score: 226 bits (575), Expect = 8.730e-62 Identity = 164/438 (37.44%), Postives = 238/438 (54.34%), Query Frame = 1
Query: 253 ARVVVDKEARTRLSRLRVRGGGYSLAMSAGLPAAVSSMIN--PVVVKASARAVSELLCCCVLGVVAAKKGILTPVNVAALSKIVYGIFLPSLLMVNVAKTCVSQSVASLLPIPAFAGIQIALGLAISGVAMRLLRINPDTEAGREAKVCMAFQNSGILPLIFLNAMFRGSPE--LLSRGVAYASFYLMGWSPTFWTIGNNILTGHLHQGKGGXXXXXXXXEDDVAAVPKAKLSLSKR-VANLPSKVKSITESP--AVRRVLSPPIVACMTGLLIGLSPPLRWLLMREGAPLGPMWSAFSNLTAAYTPSGVLVLAGSLA----NCPPGKWFSRDTQKTI------LAVGMARWFLLPLVTSGLLFGGVKYGLVPPDPMLLLVLLIESCMPSAQNSVIMLQVAGLQDEAGRNARTLCTLYLISIVPVSILLTVFISALKL 1515
A+ ++D ART L G Y+ SA L S+ N PVVVKAS AV ELL C +G ++GIL +A LS IVY I LPSLL+VNVAKT + + +LLP+P F +QI L I+ V L+ + ++ GR+ +V F N G+ P++F + R P+ +L ++Y SFYL+GW+P FWT G ++L A P A+ K V L ++K P ++R+LSPPIV + GL +G+SP L L + APLG + +A + +AYT G+LVLAGSLA P + S K+I +V + R+ L P + ++ + G V D +++ VL ++SCMPSAQNSV+M+Q++G Q +A R AR L +Y +S +P+SILLT+F+ L
Sbjct: 71 AQRIIDVHARTHLKS----GIMYAEQSSALLSVRGGSVANLDPVVVKASLTAVGELLVACGIGAWFTRRGILGREAIANLSSIVYHILLPSLLVVNVAKTVYTTPLRTLLPLPLFGTMQILLCSCIAWVVTFLMGADVNSAKGRQLRVLQTFGNGGVAPILFATVLLRNHPDPSVLPLAISYISFYLLGWTPIFWTYGYSLLV--------------------PAEAPTAQSIAEKESVVTLADRIKYFIRHPPATIKRILSPPIVGSLGGLCVGVSP-LAKLFLGPRAPLGILTNAVQTIGSAYTSMGLLVLAGSLALPLPTPSPLEEVSGAESKSIHPYLQIASVCLVRFCLCPALCLSIILRAMSTGWVKLDRLMVFVLFLQSCMPSAQNSVLMVQLSGRQADATRLARMLLYIYSLSCIPISILLTLFLQNFSL 483
BLAST of mRNA_Ecto-sp6_S_contig10.637.1 vs. uniprot
Match: A0A7S1TU85_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU85_9STRA) HSP 1 Score: 210 bits (535), Expect = 6.040e-57 Identity = 152/420 (36.19%), Postives = 222/420 (52.86%), Query Frame = 1
Query: 349 AAVSSMINPVVVKASARAVSELLCCCVLGVVAAKKGILTPVNV---AALSKIVYGIFLPSLLMVNVAKTCVSQ----SVASLLPIPAFAGIQIALGLAISGVAMRLLRINPDTEAGREAKVCMAFQNSGILPLIFLNAMFRGSPE--LLSRGVAYASFYLMGWSPTFWTIGNNILTGHLHQGKGGXXXXXXXXEDDVAAVPKAKLSLSKRVANLPSKVKSITE---SPAVRRVLSPPIVACMTGLLIGLSPPLRWLLMREGAPLGPMWSAFSNLTAAYTPSGVLVLAGSLANCPP-----------------GKWFSRDTQKTILAVGMARWFLLPLVTSGLLFGGVKYGLVPPDPMLL-LVLLIESCMPSAQNSVIMLQVAGLQDEAGRNARTLCTLYLISIVPVSILLTVFISALKLV 1518
A + +++NP V++AS +AVS L+ C VLG + A G P++ A LS+++Y + P+LL+ +VA T + A L +PAFA +QIA G + + L +E ++C F NSG LPL+ ++A FR P+ LL V Y SFYL+GWSP FWT + I E AA P+A S +K+ T+ SP +R+LSPPI+ CM+GL I P L L + AP P+ A + + Y P VLVLAGS AN G +R T K +L++ AR+ ++P V G++ G + GLV P LL +LL+E CMPSAQNSV++L + G +D AGR A+T+ LY+++I+P+++L+ IS LV
Sbjct: 12 AGMGNLMNPAVLQASIKAVSSLVACVVLGTLVAGPG--KPLDAEACATLSRLIYNVLQPALLLTSVATTITRAGGIGAAAQLFVLPAFAALQIAAGAILGLGLVSLFGWRKSGTNAKELQICSTFGNSGPLPLLLVDAFFRNHPDPTLLPAAVGYVSFYLLGWSPAFWTFASAIAA---------------TPEPKSAAKPQAVAEAE--AGEKKSPLKAFTDWYASPWGKRMLSPPIIGCMSGLTIASVPLLSTLFLGPTAPFSPLTDAIRTIGSGYLPCVVLVLAGSFANSAARGGAAGEVASSWEAKVAGMQRARQT-KALLSILCARFLIMPAVALGMMTGLTQLGLVSPTNHLLRFILLMEGCMPSAQNSVVILSMNGDKDGAGRMAKTIAALYILAIMPMTLLVGGAISFTGLV 411
BLAST of mRNA_Ecto-sp6_S_contig10.637.1 vs. uniprot
Match: A0A7S2SS74_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SS74_9STRA) HSP 1 Score: 210 bits (534), Expect = 2.490e-56 Identity = 140/383 (36.55%), Postives = 219/383 (57.18%), Query Frame = 1
Query: 388 ASARAVSELLCCCVLGVVAAKKGILTPVNVAALSKIVYGIFLPSLLMVNVAKTCVS--QSVASLLPIPAFAGIQIALGLAISGVAMRLLRINPDTEAGREAKVCMAFQNSGILPLIFLNAMFRG--SPELLSRGVAYASFYLMGWSPTFWTIGNNILTGHLHQGKGGXXXXXXXXEDDVAAVPKAKLSLSKRVANLPSKVKSITESPAVRRVLSPPIVACMTGLLIGLSPPLRWLLMREGAPLGPMWSAFSNLTAAYTPSGVLVLAGSL---ANCPPG-KWFSRDTQKTILAVG-------MARWFLLPLVTSGLLFGGVKYGLVPPDPMLLLVLLIESCMPSAQNSVIMLQVAGLQDEAGRNARTLCTLYLISIVPVSILLT 1491
ASA AVS+L+ LG AA + +L + LS++++ IF P+LL VNVA T + QS+++L IP FA QIA+G + + + +LR+ ++ GRE ++ AF NSG LPL+F +++F G P + SR VA+ SFYL+GWSP FWT G NIL+ + K+ R ++ K ++ P +R+LSPP++ C+ G +IG SP LR L + L P+ A L +AY P+ +L LAG+L P S D ++ +++G +AR+ + P+ G+L GL+P DP+L VLL+++CMPSAQNSV++LQ+ ++ AG A+TL LY+++ +P+++LL+
Sbjct: 87 ASASAVSKLIAVVSLGFWAADRKVLDANACSVLSRLIFFIFQPALLCVNVATTLSTPGQSLSTLGIIPLFALSQIAVGSLVGSLLLAVLRVPRESIPGRELRMSCAFGNSGPLPLLFADSLFAGRADPTMASRAVAFISFYLLGWSPMFWTYGRNILS----------------------PLEKSSSVEVGRDMSIKDKFWALLNDPNSQRILSPPVLGCVLGAVIGSSPQLRSLFIGTAPALKPVTDALRTLGSAYVPAVILTLAGTLHQSVRSPSAVAAASNDKEEKTVSLGSRVAALMVARFLITPVTAYGMLRVCSHAGLIPADPLLRFVLLMQACMPSAQNSVVILQLENKKEAAGSMAKTLSVLYILACLPIALLLS 447
BLAST of mRNA_Ecto-sp6_S_contig10.637.1 vs. uniprot
Match: W7U1P2_9STRA (Membrane transporter n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1P2_9STRA) HSP 1 Score: 210 bits (534), Expect = 4.590e-56 Identity = 149/398 (37.44%), Postives = 213/398 (53.52%), Query Frame = 1
Query: 358 SSMINPVVVKASARAVSELLCCCVLGVVAAKKGILTPVNVAALSKIVYGIFLPSLLMVNVAKTCVSQSV--ASLLPIPAFAGIQIALGLAISGVAMRLLRINPDTEAGREAKVCMAFQNSGILPLIFLNAMFR---GSPELLSRGVAYASFYLMGWSPTFWTIGNNILTGHLHQGKGGXXXXXXXXEDDVAAVPKAKLSLSKRVANLPSKVKSITESPAVRRVLSPPIVACMTGLLIGLSPPLRWLLMREGAPLGPMWSAFSNLTAAYTPSGVLVLAGSLA------NCPPGKWFSRDTQKTILAVGMARWFLLPLVTSGLLFGGVKYGLVPP-DPMLLLVLLIESCMPSAQNSVIMLQVAGLQDEAGRNARTLCTLYLISIVPVSILLTVFISALKL 1515
S +I P K S AV L+ C LG+ AA G+L +++ LS++++ F P+LL NVA T + S +SLL +PAFA +QI G LR++P ++AG+E VC AF NSG LPL+F +A FR P L R VAY SFYL+ WSP FWT+G+ IL Q A K+ S S LPS+ + P +R+ LSPP + C+ G L+G +P LR + APL ++ A + +AY P+ +LVLAGSLA N SR A+ AR+FL+P LL G + L+P DP+L VLL+++CMP AQN+V++LQ+ A A + +YL ++VP+ +LL+ + + L
Sbjct: 109 SLVIQPTAFKTSVNAVLRLVASCGLGLGAASHGLLDQASLSTLSRLIFAFFQPALLFTNVATTLATPSSYGSSLLVLPAFAVLQILFGFLYGKGMAASLRLDPASDAGKELAVCSAFANSGPLPLLFADAFFRLHPTDPTLYPRAVAYISFYLVAWSPLFWTLGSTILGSSTSQ----------------PAYAKSPPSPSPS-PTLPSR---LLHHPLLRKTLSPPTLGCLLGALVGSTPFLRAIFFGPTAPLAALFDALRTMGSAYLPTVLLVLAGSLAQGFKSLNLKDPALLSRTG-----AICFARFFLMPATAFLLLTLGRAFSLIPSSDPLLAFVLLLQACMPCAQNTVVILQLQQRPAAAASMATLVSLVYLAAVVPMGLLLSFVLQYVGL 481
BLAST of mRNA_Ecto-sp6_S_contig10.637.1 vs. uniprot
Match: A0A4D9D5S5_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5S5_9STRA) HSP 1 Score: 206 bits (523), Expect = 1.050e-54 Identity = 146/434 (33.64%), Postives = 225/434 (51.84%), Query Frame = 1
Query: 388 ASARAVSELLCCCVLGVVAAKKGILTPVNVAALSKIVYGIFLPSLLMVNVAKTCV--SQSVASLLPIPAFAGIQIALGLAISGVAMRLLRINPDTEAGREAKVCMAFQNSGILPLIFLNAMFRGSPE--LLSRGVAYASFYLMGWSPTFWTIGNNIL------TG--------------------HLHQGKGGXXXXXXXXEDDVAAV-----------------PKAKLSLSKRVA-----NLPS---------KVKSITESPAVRRVLSPPIVACMTGLLIGLSPPLRWLLMREGAPLGPMWSAFSNLTAAYTPSGVLVLAGSLANCPPGKWFSRDTQKTILAVGMARWFLLPLVTSGLLFGGVKYGLVPP-DPMLLLVLLIESCMPSAQNSVIMLQVAGLQDEAGRNARTLCTLYLISIVPVSILLTVFIS 1503
A++ AV L+ CC LGV A++ +L ++ALS++VY +F PSLL NV + SQ+ ++ +P A +QI IS V +RL+ +NP +EAGRE ++C F N+G LPL+F++A+F+ P+ L +R VA+ SFYL+ WSP FW G IL TG L G GG A V P + ++V + PS K + + S A++++L+PP + C G L+G+ PLR LL + AP ++SA + +AY P +L+L+GSLA G F + + + V R+ ++P V + G + GL+P DP+LL V+L++ CMPSAQNSV++LQ+ A AR + T+Y++SI+PV +L+ +S
Sbjct: 25 AASGAVLNLVACCCLGVTASRYRVLDQQALSALSRLVYNVFQPSLLFTNVLQILATPSQARGTIFLLPLAAAVQIVTAAGISRVLLRLVGLNPFSEAGREVRICSTFANAGPLPLLFVDALFKNHPDPTLRTRAVAFISFYLLAWSPLFWNYGYGILVDKTEDTGGKKGQPMEYSSLGTQSVGGPRLGSGTGGAGMMVNGNGSAAAMVLEEGVDGKETHATNWTSPHQQQYSRQQVPCSEGRSYPSHALVRSALEKARRVAHSRAMKKLLNPPTLGCTLGALVGVCSPLRGLLFGDTAPFSCVFSALRTMGSAYVPCVLLILSGSLAQGLEG--FDSNVFRRAMLVMFQRFCIMPAVAFACVETGKRTGLLPTQDPLLLFVILLQGCMPSAQNSVLILQLERRPQAAASIARLISTVYILSILPVGMLIRTLLS 456
BLAST of mRNA_Ecto-sp6_S_contig10.637.1 vs. uniprot
Match: A0A5J4YJ85_PORPP (Protein PIN-LIKES 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YJ85_PORPP) HSP 1 Score: 202 bits (515), Expect = 1.550e-53 Identity = 139/382 (36.39%), Postives = 210/382 (54.97%), Query Frame = 1
Query: 379 VVKASARAVSELLCCCVLGVVAAKKGILTPVNVAALSKIVYGIFLPSLLMVNVAKTCVSQSVASLLPIPAFAGIQIALGLAISGVAMRLLRINPDTEAGREAKVCMAFQNSGILPLIFLNAMFRGSPELLSRGVAYASFYLMGWSPTFWTIGNNILTGHLHQGKGGXXXXXXXXEDDVAAVPKAKLSLSKRVANLPSKVKSITESPAVRRVLSPPIVACMTGLLIGLSPPLRWLLMREGAPLGPMWSAFSNLTAAYTPSGVLVLAGSLANCPPGK--------WFSRDTQKTILAVGMARWFLLPLVTSGLLFGGVKYGLVPPDPMLLLVLLIESCMPSAQNSVIMLQVAGLQDEAGRNARTLCTLYLISIVPVSILLTVFI 1500
V++ S A ++LL ++G A K+G+L+ ++ALS VY IFLPS+L N+ +T S++S+ +P A QIA G S +A RL RI+ ++AG+ V AF NS LPL+F N +F P + V+ SF+L+GWSP FW+IG I+ G G A P L+ R + ++++ + P V RV +PPIV ++GLL+G P LR + +GAPLG ++ + S L AAY P VLVLAGSLA+ K S + K I AV R+ L+PL G L + P+L +L+ES MP+AQN+V+MLQ+ + A R A L +Y+++++P+S+ ++ F+
Sbjct: 96 VLQISVIATAKLLVTILIGGFAQKRGVLSKQVLSALSASVYNIFLPSVLFCNMVQTLAKHSLSSVGLVPLLALAQIAFGWLCSILACRLFRIDTHSDAGKFVTVSCAFGNSAALPLLFANNLFAADPVRQAGLVSGISFFLLGWSPLFWSIGYMIMAGEASTKSAGATQL---------AAP--SLNADARTG-IRARIQQLVRHPMVARVFAPPIVGALSGLLVGSIPVLRRAFLADGAPLGILFESLSGLGAAYVPCAVLVLAGSLASNVGKKKQDGDVSAGISAEDLKQIAAVSFVRFCLVPLFAVGSLIATRRVLGATLRPILQFTILLESVMPAAQNTVLMLQLENKPEAASRVATLLLYIYILAVIPISLGISHFL 465
BLAST of mRNA_Ecto-sp6_S_contig10.637.1 vs. uniprot
Match: R1CQU2_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CQU2_EMIHU) HSP 1 Score: 198 bits (504), Expect = 6.010e-52 Identity = 138/409 (33.74%), Postives = 227/409 (55.50%), Query Frame = 1
Query: 367 INPVVVKASARAVSELLCCCVLGVVAAKKGILTPVNVAALSKIVYGIFLPSLLMVNVAKTCVSQSV-ASLLPIPAFAGIQIALGLAISGVAMRLLRINPDTEAGREAKVCMAFQNSGILPLIFLNAMFRGSPELLSR--GVAYASFYLMGWSPTFWTIGNNILTGHLHQGKGGXXXXXXXXEDDVAAVPKAKLSLSKRV-----------ANLPSKVKSITESPAVRRVLSPPIVACMTGLLIGLSPPLRWLLMREGAPLGP-------MWSAFSNLTAAYTPSGVLVLAGSLA----NCPPGKWFSRDTQKTILAVGMARWFLLPLVTSGLLFGGVKYGLVPPDPMLLLVLLIESCMPSAQNSVIMLQVAGLQDEAGRNARTLCTLYLISIVPVSILLTVFISALKLV 1518
+NPV+++ + +++ELL C +G A K G L+ + +L+ +V+ +FLP++L+ +VA T Q A+L +P A Q+A+G +++ V++ LLR+ + AGR V +F N+G+LPL+F++++FRG+ + +R + + +L+GWSP FWT+G +LTGH XXXXXXX A ++++ + S +RR LSPPI AC+ GL++G + P ++ L AY+P+ +LVLAGSLA G+ + ++A+ +AR+ +PL++ LL ++ GL+P DP+ LVLL++SCMPSAQNSV+ LQV G + A R AR L +YLI+ +PV+ +L++ + V
Sbjct: 61 VNPVILRLTRDSMAELLTSCAIGYGATKAGYLSGSQIRSLAGVVFNVFLPAMLLTSVASTVAEQQAGAALAVMPIAAWAQVAVGASVASVSLALLRLPRRSSAGRGVSVLSSFGNAGVLPLLFVSSLFRGAAQEATRRRATSLVAMFLLGWSPLFWTLGYALLTGHAALSPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVGAARAARLRQLRAS--LRRALSPPIAACLAGLVVGSAXXXXXXXXXXXXXXXPSLQSWLPLFRCLEALGKAYSPAALLVLAGSLAAPTEQRRAGEGELGASASHVVAIAVARFCAVPLLSFALLHAALRAGLLPADPLRDLVLLLQSCMPSAQNSVLALQVDGSPERAARMARVLLAIYLIAALPVAGILSLLLQRYSAV 467
BLAST of mRNA_Ecto-sp6_S_contig10.637.1 vs. uniprot
Match: A0A8J6CA09_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CA09_DIALT) HSP 1 Score: 195 bits (496), Expect = 3.220e-51 Identity = 143/416 (34.38%), Postives = 210/416 (50.48%), Query Frame = 1
Query: 355 VSSMINPVVVKASARAVSELLCCCVLGVVAAKKGILTPVNVAALSKIVYGIFLPSLLMVNVAKTCVSQSVA-SLLPIPAFAGIQIALGLAISGVAMRLLRINPDTEAGREAKVCMAFQNSGILPLIFLNAMFRGSP----ELLSRGVAYASFYLMGWSPTFWTIGNNILTGHLHQGKGGXXXXXXXXEDDVAAVPKAKLSLSKRVANLPSKVKSITESPAVRRVLSPPIVACMTGLLIGLSPPLRWLLMREGAPLGPMWSAFSNLTAAYTPSGVLVLAGSLANCPP---------------GKWFSRDTQKT------ILAVGMARWFLLPLVTSGLLFGGVKYGLVPP---DPMLLLVLLIESCMPSAQNSVIMLQVAGLQDEAGRNARTLCTLYLISIVPVSILLTVFISALKL 1515
V ++ +P V SA AV+EL LG A + G+L V L++IVY FLP L +V +T + V+ +L +P + IQIA GL+++ + +R L I+P + R C AF N+G+LPL+ A+FR P +L R +Y SFYL+GWSP FW++G +ILTG + DVAA + + RRV+SPPI+ + GL GL P ++L +PL + A N+ AY P+ +LVLAGSLA P G+ + +L + R+ L PL+ GL+ ++P DP+L LL+ S MP AQNSV+MLQVAG Q A + +R L +Y ++ VP+S+LL+VF+ + L
Sbjct: 59 VCTLFSPAVFATSAGAVAELAVSAGLGYAAVRSGLLERSGVTQLARIVYNFFLPIFLFASVTRTVQTYGVSRGMLALPLVSAIQIACGLSVARLLLRALGISPALRSSRRFVTCAAFGNTGVLPLVLAEAIFRSPPYADATVLPRAASYLSFYLLGWSPIFWSLGKSILTG----------------DGDVAAAGEPRWR------------------QFARRVISPPIIGALGGLAFGLLCP-SFVLESPRSPLRIVMQALRNIARAYPPAALLVLAGSLAGDAPVSAKAGPEQAAPMDAGRGADAQAPREMGMPTMLLGITAFRFVLSPLIALGLVRALSALRVLPSVSADPLLTFALLLNSAMPPAQNSVLMLQVAGDQKGATQMSRVLFVVYALAAVPISVLLSVFLQRVGL 439 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.637.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig10.637.1 >prot_Ecto-sp6_S_contig10.637.1 ID=prot_Ecto-sp6_S_contig10.637.1|Name=mRNA_Ecto-sp6_S_contig10.637.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=507bp MVTDERGTPRQAARTRRRCKPFATAADGAGLGSNGRGRSTSTLATVFVLLback to top mRNA from alignment at Ecto-sp6_S_contig10:2249578..2259148+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig10.637.1 ID=mRNA_Ecto-sp6_S_contig10.637.1|Name=mRNA_Ecto-sp6_S_contig10.637.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=9571bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:2249578..2259148+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig10:2249578..2259148+ >mRNA_Ecto-sp6_S_contig10.637.1 ID=mRNA_Ecto-sp6_S_contig10.637.1|Name=mRNA_Ecto-sp6_S_contig10.637.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1521bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:2249578..2259148+ (Ectocarpus species6 EcLAC_371)back to top |