mRNA_Ecto-sp6_S_contig10.628.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig10.628.1
Unique NamemRNA_Ecto-sp6_S_contig10.628.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
[Close]
BLAST of mRNA_Ecto-sp6_S_contig10.628.1 vs. uniprot
Match: D7FPA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPA8_ECTSI)

HSP 1 Score: 937 bits (2423), Expect = 0.000e+0
Identity = 526/615 (85.53%), Postives = 528/615 (85.85%), Query Frame = 1 
Query:    1 EDERIRREREDQEKRRQKQHIDRLAKQVKALMERVYEFREQAARAKQEVASQQEENKELKMRIEQMREDHSEMMVAQARGGLTGGINRANARDSKNTRDRDAEMRRRRLAKNALLAGVVEEEEDLVITLEGISTSSLAQLSGRFYRWLGKKLPLGADVRAIQ------------------------------------------------------------------------------------VVSATVKWIREDKIRKELFIVDEEQKHVQFAKTFLVGWDNSLSNQQEVEDYRMSNGLAAANMLAEVSQADASATRSLDDKIWLYSYRCFGFALYVGVQMAAWAAIIFLTAESDNVASGLAQQLQSVAWISQAAAVISTSIVPATVTVINAIMPIIIKAITKLEKWDMERTVTYMLTIRMFLAKILNAFIQALSYLLLADPYLFAGQQYTIIINRGRVEQNFEPSGFDCRLDQAGAGLFQLVVTEFVFSKIINYATLRAAQVKARYSKKLFVKPEFEVAKRMVGLLYFQALILAAYPFFPMGTVFVAPFLILSFKFEKKLLTAFQVYRSLSEHDMTKARIWVSVVMSGVGSNGHEEICRDTSFRRCHSTV 1593
            EDERIRREREDQEKRRQKQHIDRLAKQVKALMERVYEFREQAARAKQEVASQQEENKELKMRIEQMREDHSEMMVAQARGGLTGGINRANARDSKNTRDR+AEMRRRRLAKNALLAGVVEEEEDLVITLEGISTSSLAQLSGRFYRWLGKKLPLGADVRAIQ                                                                                    VVSATVKWIREDKIRKELFIVDEEQKHVQFAKTFLVGWDNSLSNQQEVEDYR+SNGLAAANMLAEVSQADASATRSLDDKIWLYSYRCFGFALYVGVQMAAWAAIIFLTAESDNVASGLAQQLQSVAWISQAAAVISTSIVPATVTVINAIMPIIIKAITKLEKWDMERTVTYMLTIRMFLAKILNAFIQALSYLLLADPYLFAGQQYTIIINRGRVEQNFEPSGFDCRLDQAGAGLFQLVVTEFVFSKIINYATLRAAQVKARYSKKLFVKPEFEVAKRMVGLLYFQALILAAYPFFPMGTVFVAPFLILSFKFEKKLLTAFQVYR LSE DMTKARIWV VVMSGVGSNGHEEICRDTSFRRCHSTV
Sbjct:    6 EDERIRREREDQEKRRQKQHIDRLAKQVKALMERVYEFREQAARAKQEVASQQEENKELKMRIEQMREDHSEMMVAQARGGLTGGINRANARDSKNTRDREAEMRRRRLAKNALLAGVVEEEEDLVITLEGISTSSLAQLSGRFYRWLGKKLPLGADVRAIQARYGSAVASYFHFYRWLVGTYIFIASLSLVWIVFHVLKQVNQGSASVFSASLVGIIPSFLAYSSFDSSNRNLYAIMVVLTTTVQVVSATVKWIREDKIRKELFIVDEEQKHVQFAKTFLVGWDNSLSNQQEVEDYRLSNGLAAANMLAEVSQADASATRSLDDKIWLYSYRCFGFALYVGVQMAAWAAIIFLTAESDNVASGLAQQLQSVAWISQAAAVISTSIVPATVTVINAIMPIIIKAITKLEKWDMERTVTYMLTIRMFLAKILNAFIQALSYLLLADPYLFAGQQYTIIINRGRVEQNFEPSGFDCRLDQAGAGLFQLVVTEFVFSKIINYATLRAAQVKARYSKKLFVKPEFEVAKRMVGLLYFQALILAAYPFFPMGTVFVAPFLILSFKFEKKLLTAFQVYRPLSELDMTKARIWVLVVMSGVGSNGHEEICRDTSFRRCHSTV 620
[Close]
BLAST of mRNA_Ecto-sp6_S_contig10.628.1 vs. uniprot
Match: A0A6H5K9M5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M5_9PHAE)

HSP 1 Score: 800 bits (2066), Expect = 1.390e-282
Identity = 462/573 (80.63%), Postives = 472/573 (82.37%), Query Frame = 1 
Query:    1 EDERIRREREDQEKRRQKQHIDRLAKQVKALMERVYEFREQAARAKQEVASQQEENKELKMRIEQMREDHSEMMVAQARGGLTGGINRANARDSKNTRDRDAEMRRRRLAKNALLAGVVEEEEDLVITLEGISTSSLAQLSGRFYRWLGKKLPLGADVRAIQ------------------------------------------------------------------------------------VVSATVKWIREDKIRKELFIVDEEQKHVQFAKTFLVGWDNSLSNQQEVEDYRMSNGLAAANMLAEVSQADASATRSLDDKIWLYSYRCFGFAL---YVGVQMAAWAAIIFLTAESDNVASGLAQQLQSVAWISQAAAVISTSIVPATVTVINAIMPIIIKAITKLEKWDMERTVTYMLTIRMFLAKILNAFIQALSYLLLADPYLFAGQQYTIIINRGRVEQNFEPSGFDCRLDQAGAGLFQLVVTEFVFSKIINYATLRAAQVKARYSKKLFVKPEFEVAKRMVGLLYFQALILAAYPFFPMGTVFVAPFLILSFKFEKKLLTAFQ 1458
            EDERIRREREDQEKRRQKQHIDRLAKQVKALMERVYEFREQAARAKQEVA QQEENKELK+RIEQMREDHSEMMVAQARGGLTGGINRANARDSKNTRDR+AEMRRRRLAKNALLAGVVEEEEDLVITLEG+STSSLAQLSGRFYRWLGKKLPLGADVRAIQ                                                                                    +VSATVKWIREDKIRKELFIVDEEQKHVQFAKTFLVGWDNSLSNQQEVEDYR+SNGLAAANMLAEVSQADASATRS   +  + +   FGF L   + G QMAAWAAIIFLTAESDNVASGLAQQLQSVAWISQAAAVISTSIVPATVTVINAIMPIIIKAITKLEKWDMERTVTYMLTIRMFLAKILNAFIQALSYLLLADPYLFAGQQYT+IINRGRVEQNFEPSGFDCRLDQAGAGLFQLVVTEFVFSKIINYATLRAAQVKARYSKKLFVKPEFEVAKRMVGLLYFQALILAAYPFFPMGTVFVAPFLILSFKFEKKLLT FQ
Sbjct:  118 EDERIRREREDQEKRRQKQHIDRLAKQVKALMERVYEFREQAARAKQEVALQQEENKELKIRIEQMREDHSEMMVAQARGGLTGGINRANARDSKNTRDREAEMRRRRLAKNALLAGVVEEEEDLVITLEGMSTSSLAQLSGRFYRWLGKKLPLGADVRAIQARYGSAVASYFHFYRWLVGTYIFIASLSLVWIVFHILKQIKQGSASVFSASLVGIIPSFLAYSSFDSSNRNLYAIMVVLTTTVQIVSATVKWIREDKIRKELFIVDEEQKHVQFAKTFLVGWDNSLSNQQEVEDYRLSNGLAAANMLAEVSQADASATRSKYPRDSVTTNPAFGFCLLLSFFGFQMAAWAAIIFLTAESDNVASGLAQQLQSVAWISQAAAVISTSIVPATVTVINAIMPIIIKAITKLEKWDMERTVTYMLTIRMFLAKILNAFIQALSYLLLADPYLFAGQQYTVIINRGRVEQNFEPSGFDCRLDQAGAGLFQLVVTEFVFSKIINYATLRAAQVKARYSKKLFVKPEFEVAKRMVGLLYFQALILAAYPFFPMGTVFVAPFLILSFKFEKKLLTTFQ 690
[Close]
BLAST of mRNA_Ecto-sp6_S_contig10.628.1 vs. uniprot
Match: A0A835ZA44_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA44_9STRA)

HSP 1 Score: 309 bits (791), Expect = 2.770e-96
Identity = 163/311 (52.41%), Postives = 223/311 (71.70%), Query Frame = 1 
Query:  481 IQVVSATVKWIREDKIRKELFIVDEEQKHVQFAKTFLVGWDNSLSNQQEVEDYRMSNGLAAANMLAEVSQADASATRSLDDKIWLYSYRCFGFALYVGVQMAAWAAIIFLTAESDNVASGLAQQLQSVAWISQAAAVISTSIVPATVTVINAIMPIIIKAITKLEKWDMERTVTYMLTIRMFLAKILNAFIQALSYLLLADPYLFAGQQYTIIINRGRVEQNFEPSGFDCRLDQAGAGLFQLVVTEFVFSKIINYATLRAAQVKARYSKKLFVKPEFEVAKRMVGLLYFQALILAAYPFFPMGTVFVAPFL 1413
            +Q     +KW+ ED++R EL  ++E+QKHVQFA+TFLVGWDN+ +   EVE+ R SNG+  A +LAE + A  +A+R+L  K  L+  RC G  +Y+ +Q+AAW AI+ LTA S  +A+ +  +L +V+W+    + ++ SIVP  VT+IN IMP+ IK IT +E+WD  +T+TYML  RM+LAKILNA IQA SY+LLA+PYL +     +   R  VEQ ++ + F+CR+DQA +GLFQLVVTEFV S II  A+L AA+++A+ S K FVKPEFEVAK MV LLYFQALILA++PFFPM  +FV  F+
Sbjct:  150 LQATVTLIKWLVEDRLRCELDALEEDQKHVQFARTFLVGWDNNTAKGHEVEELRCSNGMQLAVLLAEDTAAKTTASRTLRQKALLFVRRCLGMVVYMALQLAAWYAIVLLTASSRALATWILNELAAVSWLKGFTSTLAVSIVPVGVTIINTIMPVFIKLITDIEQWDSAKTITYMLVTRMYLAKILNACIQAASYMLLANPYLISRIDTNL---RRNVEQGYDSTSFECRIDQASSGLFQLVVTEFVLSPIIAAASLLAAKLQAKVSSKAFVKPEFEVAKNMVSLLYFQALILASFPFFPMSPIFVTLFM 457
[Close]
BLAST of mRNA_Ecto-sp6_S_contig10.628.1 vs. uniprot
Match: A0A7S1UGG4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UGG4_9STRA)

HSP 1 Score: 202 bits (513), Expect = 1.650e-52
Identity = 117/321 (36.45%), Postives = 189/321 (58.88%), Query Frame = 1 
Query:  505 KWIREDKIRKELFIVDEEQK---------HVQFAKTFLVGWDNSLSNQQEVEDYRMSNGLAAANMLAEVSQADASATRSLDDKIWLYSYRCFGFALYVGVQMAAWAAIIFLTAESDNVASGLAQQLQSVAWISQAAAVISTSIVPATVTVINAIMPIIIKAITKLEKWDMERTVTYMLTIRMFLAKILNAFIQALSYLLLADPYLFAGQQYTIIINRGRVEQNFEPSGFDCRLDQAGAGLFQLVVTEFVFSKIINYATLRAAQVKARY-SKKLFVKPEFEVAKRMVGLLYFQALILAAYPFFPMGTVFVAPFLILSFKFEK 1437
            KWI++DK+RK++  ++E +             FAK FL  WDNS+  ++ V+D R+SNG      L  +   D    R+L + + LY+ R  G  LY+G+Q  +WA I+ L   +D ++  + + + +++         +T+++   V+VINA+MP +I  +T+LE WD  + +  + T ++FL+K+LN  IQA++Y L  +PY F G++      R  ++++F    +DC  DQAG  LF LV +EF   K+I+     A  + +++ +KK +V  EF++A R VGLLYFQ L+L A+P+ P+ T FV  F ILSFKFEK
Sbjct:  399 KWIKDDKVRKQIQSLEESKGDDDGAGPGGRSNFAKQFLCVWDNSVFAKESVQDSRLSNGQEILVSLETLKVVDTKE-RTLQESLVLYAKRALGLLLYMGLQGVSWACIVMLLISTDAISKAMEEDVGNLSGSDTFQETATTAVISGGVSVINAVMPKVIDLLTQLESWDTAQMIVKVTTTKLFLSKMLNVLIQAVAYNLTTNPYAF-GEREAFRTARDSIKKDFLEESYDCAADQAGLALFTLVFSEFFVGKVIDLVMPVAMTLVSKFVTKKPYVPDEFQLATRFVGLLYFQGLVLVAFPYVPLTTFFVVIFFILSFKFEK 717
[Close]
BLAST of mRNA_Ecto-sp6_S_contig10.628.1 vs. uniprot
Match: A0A2R5GNY3_9STRA (Transmembrane channel-like protein 5 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GNY3_9STRA)

HSP 1 Score: 185 bits (469), Expect = 1.830e-46
Identity = 129/346 (37.28%), Postives = 191/346 (55.20%), Query Frame = 1 
Query:  493 SATVKWIREDKIRKELFIVDEEQKHVQFAKTFLVGWDNSLSNQQEVEDYRMSNGLAAANMLA--EVSQADASATRSLDDKIWLYSYRCFGFALYVGVQMAAWAAIIFLTAESDNVASGLAQQLQ---SVAWISQAAAVISTSIVPATVTVINAIMPIIIKAITKLEKWDMERTVTYMLTIRMFLAKILNAFIQALSYLLLADPYLFAGQQYTIIINRG---RVEQNFE----------------PSGFD-CRLDQAGAGLFQLVVTEFVFSKIINYATLRAAQVKARYSKKLFVKPEFEVAKRMVGLLYFQALILAAYPFFPMGTVFVAPFLILSFKFEKKLLTAF 1455
            S+  KWIRED+  K   + ++     +FA++ L  WD+S+S+ +EVED +  + L     L   E++ A+   +RS  +++ L + R     +Y+ VQ ++ AAII+LTA S  ++  + Q +    S+ W+     +IS SIVP  V+VINA++P ++  +T  EKWD     T  +  R+F+AKILNAFIQ  S+L L DPY+  G     II+R        N E                P G D CR D  GAG+FQLV+TEFV SK        A  + A+  K+ + + EF VAK MV LL+FQ L   ++PFFP GT+F+A  + L FK + ++L  F
Sbjct:  492 SSINKWIREDRRAKAFGLFEDLDSQSRFAQSALNAWDHSISDPREVEDLK--HTLLDQYFLTTHELNTANKKKSRSFKERLTLRARRITANFIYISVQGSSAAAIIYLTATSAQMSQNVLQIISDNASLQWLLPIVTLISGSIVPLAVSVINALLPAVVTFVTAFEKWDDGGFHTKYMLSRLFVAKILNAFIQVFSFLQLLDPYMLRGDP---IISRDFSLTARTNTEKRLVSVGSTYGAAGTVPRGLDECRADLYGAGIFQLVITEFVVSKTAFAIVPAAKYLIAKLRKRPYERNEFHVAKHMVDLLFFQQLCFMSFPFFPFGTIFIAGMMFLGFKLQLRVLNGF 832
[Close]
BLAST of mRNA_Ecto-sp6_S_contig10.628.1 vs. uniprot
Match: A0A7S1G983_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G983_9STRA)

HSP 1 Score: 166 bits (421), Expect = 2.560e-40
Identity = 117/328 (35.67%), Postives = 175/328 (53.35%), Query Frame = 1 
Query:  496 ATVKWIREDKIRKELFIVDEEQKHVQFAKTFLVGWDNSLSNQQEVEDYRMSNGLAAANMLAEVSQADASATRSLDDKIWLYSYRCFGFALYVGVQMAAWAAIIFLTAESDNVASGLAQQLQSVAWISQAAAVISTSIVPATVTVINAIMPIIIKAITKLEKWDMERTVTYMLTIRMFLAKILNAFIQALSYLLLADPYLFAGQQYT------IIINRGRVEQNFEPSGFDCRLDQAGAGLFQLVVTEFVFSKIINYATLRAAQVKARYSKKLFVKPEFEVAKRMVGLLYFQALILAAYPFFPMGTVFVAPFLILSFKFEKKLLTAFQV 1461
            A  KW+RED+  K + +++ ++   ++++  L  WD SL    EV D + + G      L E   AD    RS+     LY+ R  G  L V +Q  A   II LT  S  +A+ +       A   +  A  +  IVP  V+V+NA+ P I+ A++K EKWD   T    L  R+F+AK+LN  +Q  S+  LADPY+  G  +       ++  R   ++ F+P  + CR DQAGAG+FQLV+ EFV SK+I  AT  A +  AR  K+++ K +  VA+ M  LL+F  L++ ++P+ P   V     L L+FKFE  +L  FQV
Sbjct:  346 AVRKWVREDRRAKAISVLEGKEGEHKYSQITLNAWDYSLVA-TEVADLKYAIGEQILLALHEDEVADLQRKRSIKQDAILYTRRGVGLLLSVALQGGAAFVIIQLTITSAQLANVIK------ATGGEVLAPFADFIVPVAVSVLNALQPPILTALSKFEKWDSGGTQVKTLVWRLFIAKMLNMLLQIFSFAQLADPYMLRGPTFGFSDTDFLVSVRQSTQKRFQPDSYACRADQAGAGIFQLVLAEFVVSKVIALATPFAFKALARVRKRVWKKAQHSVAQAMAALLFFTQLVMNSFPWTPFTAVVNTVLLYLTFKFEVFILRRFQV 666
[Close]
BLAST of mRNA_Ecto-sp6_S_contig10.628.1 vs. uniprot
Match: A0A6A4CZB2_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A4CZB2_9STRA)

HSP 1 Score: 135 bits (341), Expect = 5.010e-30
Identity = 91/250 (36.40%), Postives = 133/250 (53.20%), Query Frame = 1 
Query:  505 KWIREDKIRKELFIVDEEQKHVQFAKTFLVGWDNSLSNQQEVEDYRMSNGLAAANMLAEVSQADASATRSLDDKIWLYSYRCFGFALYVGVQMAAWAAIIFLTAESDNVASGLAQQLQSVAWISQAAAVISTSIVPATVTVINAIMPIIIKAITKLEKWDMERTVTYMLTIRMFLAKILNAFIQALSYLLLADPYLFAGQQYTIIIN-------RGRVEQNFEPSGFDCRLDQAGAGLFQLVVTEFVFSK 1233
            KWI ED++ K +  V+   +  ++++  L  WD SL+   +V D + +        + E  +A+   +R+   K  LY+ R   F  Y+ +Q A+W  II LT +S  +      QLQ +A  +   A  ++SIVPA VTVINAI+P +I  +T +EKWD        +  R++LAKILN  IQ  S+ LL DP L    Q  + +        R  V  +F+P  FDCR +QA AGL  LVVT+F  SK
Sbjct:  335 KWIAEDRMSKAVQAVENASEKPKYSRILLNAWDFSLTTSDQVSDLKKTIAEQVKIAMEEEKRAETIKSRTKKQKYILYARRFVAFIFYMMIQAASWYLIILLTTQSSQL------QLQ-IAARAAIFAPYASSIVPAVVTVINAILPKLISLLTTIEKWDDVGFAIKAMVTRLYLAKILNVLIQLFSFALLLDPMLLTSTQNILELFTFDGSTVRKNVMLDFKPESFDCRAEQASAGLLTLVVTDFSVSK 577
[Close]
BLAST of mRNA_Ecto-sp6_S_contig10.628.1 vs. uniprot
Match: W2QU44_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2QU44_PHYPN)

HSP 1 Score: 131 bits (329), Expect = 1.640e-28
Identity = 88/253 (34.78%), Postives = 132/253 (52.17%), Query Frame = 1 
Query:  505 KWIREDKIRKELFIVDEEQKHVQFAKTFLVGWDNSLSNQQEVEDYRMSNGLAAANMLAEVSQADASATRSLDDKIWLYSYRCFGFALYVGVQMAAWAAIIFLTAESDNVASGLAQQLQSVAWISQAAAVIS---TSIVPATVTVINAIMPIIIKAITKLEKWDMERTVTYMLTIRMFLAKILNAFIQALSYLLLADPYLFAGQQYTIIIN-------RGRVEQNFEPSGFDCRLDQAGAGLFQLVVTEFVFSK 1233
            KW+ ED++ K +  V+   +  ++++  L  WD SL+ Q +  D + +        + E  +A+   +R+   +  LY+ R   F  YV +Q A+W  II LT +S  +      QLQ    I++ AA+ +   +SIVPA VTVINAI+P +I  +T LEKWD        +  R++LAKILN  IQ  S+ LL DP+L    Q  + +        R  V   F+   + CR +Q  AGL  LVVT+F  SK
Sbjct:  329 KWVAEDRMSKTVQAVENTSEKPKYSRILLNAWDFSLTTQNQASDLKKTIAEQVQLAMEEEKRAETIKSRTKKQRYILYARRFVAFVFYVAIQAASWYLIILLTTQSSQI------QLQ----IAEKAAIFAPYASSIVPAVVTVINAILPKLISLLTALEKWDDVGFAIKAMVTRLYLAKILNVLIQMFSFALLLDPFLLTSTQKILDLFTFEGSTVRENVMLEFKSEVYTCRAEQVSAGLLTLVVTDFSVSK 571
[Close]
BLAST of mRNA_Ecto-sp6_S_contig10.628.1 vs. uniprot
Match: A0A329SIR7_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SIR7_9STRA)

HSP 1 Score: 130 bits (328), Expect = 2.200e-28
Identity = 88/253 (34.78%), Postives = 132/253 (52.17%), Query Frame = 1 
Query:  505 KWIREDKIRKELFIVDEEQKHVQFAKTFLVGWDNSLSNQQEVEDYRMSNGLAAANMLAEVSQADASATRSLDDKIWLYSYRCFGFALYVGVQMAAWAAIIFLTAESDNVASGLAQQLQSVAWISQAAAVIS---TSIVPATVTVINAIMPIIIKAITKLEKWDMERTVTYMLTIRMFLAKILNAFIQALSYLLLADPYLFAGQQYTIIIN-------RGRVEQNFEPSGFDCRLDQAGAGLFQLVVTEFVFSK 1233
            KW+ ED++ K +   +   +  ++++  L  WD SL+ Q +V D + +        + E  +A+   +R+   +  LY  R   F  Y+ +Q A+W  II LT +S  +      QLQ    I++ AA+ +   +SIVPA VTVINAI+P +I  +T +EKWD        +  R++LAKILN  IQ  S+ LL DP L    Q  + +        R  V   F+P  + CR +QA AGL  LVVT+F  SK
Sbjct:  329 KWVAEDRMSKTVQAAENASEKPKYSRILLNAWDFSLTTQDQVSDLKKTIAEQVQLAMEEEKRAETIKSRTKKQRYILYVRRFVAFVFYMAIQAASWYLIILLTTQSSQI------QLQ----IAEKAAIFAPYASSIVPAVVTVINAILPKLISLLTAIEKWDDVGFAIKAMVTRLYLAKILNVLIQMFSFALLLDPLLLTSTQNILGLFTFEGSTVRKNVMLKFKPEVYTCRAEQASAGLLTLVVTDFSVSK 571
[Close]
BLAST of mRNA_Ecto-sp6_S_contig10.628.1 vs. uniprot
Match: A0A7S2SRA3_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SRA3_9STRA)

HSP 1 Score: 100 bits (250), Expect = 4.600e-21
Identity = 64/157 (40.76%), Postives = 83/157 (52.87%), Query Frame = 1 
Query: 1033 KILNAFIQALSYLLLADPYLFAGQQYTIIINRGRVEQNFE---------------PSGFD-CRLDQAGAGLFQLVVTEFVFSKIINYATLRAAQVKARYSKKLFVKPEFEVAKRMVGLLYFQALILAAYPFFPMGTVFVAPFLILSFKFEKKLLTAF 1455
            K LNA IQ  S+L L DPY+  G+             N E               P G D CR D  GAG+FQLVVTEF+ SKI  + T  +  + ++  KK + + EFEVAK+MV LL+FQ L   ++PFFP GT+ V   +   FK EK +L  F
Sbjct:    1 KSLNALIQIFSFLQLLDPYMLLGEPLVSTTFDRNTRMNTEKRFVTADGSTLASRVPMGLDECRADTFGAGVFQLVVTEFIISKIAFFVTPFSIWIISKIRKKPYERKEFEVAKQMVNLLFFQQLCFMSFPFFPFGTLIVVMMMFAGFKIEKIVLEKF 157
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.628.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D7FPA8_ECTSI0.000e+085.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K9M5_9PHAE1.390e-28280.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZA44_9STRA2.770e-9652.41Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1UGG4_9STRA1.650e-5236.45Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A2R5GNY3_9STRA1.830e-4637.28Transmembrane channel-like protein 5 n=1 Tax=Honda... [more]
A0A7S1G983_9STRA2.560e-4035.67Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A6A4CZB2_9STRA5.010e-3036.40Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]
W2QU44_PHYPN1.640e-2834.78Uncharacterized protein n=10 Tax=Phytophthora TaxI... [more]
A0A329SIR7_9STRA2.200e-2834.78Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A7S2SRA3_9STRA4.600e-2140.76Hypothetical protein (Fragment) n=1 Tax=labyrinthu... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:2131882..2141838 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score135.6
Seed ortholog evalue6.9e-29
Seed eggNOG ortholog4792.ETI32815
Model size1596
Hectar predicted targeting categoryother localisation
Exons15
EggNOG OGs2CT9D@1,2RFG2@2759,3QGUY@4776
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-15_004100.1
Cds size1596
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348714.243546-CDS-Ecto-sp6_S_contig10:2131881..21319681682348714.243546-CDS-Ecto-sp6_S_contig10:2131881..2131968Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 2131882..2131968 +
1682348714.2523296-CDS-Ecto-sp6_S_contig10:2132518..21326261682348714.2523296-CDS-Ecto-sp6_S_contig10:2132518..2132626Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 2132519..2132626 +
1682348714.264863-CDS-Ecto-sp6_S_contig10:2133849..21340021682348714.264863-CDS-Ecto-sp6_S_contig10:2133849..2134002Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 2133850..2134002 +
1682348714.2741003-CDS-Ecto-sp6_S_contig10:2134647..21347851682348714.2741003-CDS-Ecto-sp6_S_contig10:2134647..2134785Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 2134648..2134785 +
1682348714.2820082-CDS-Ecto-sp6_S_contig10:2135870..21359091682348714.2820082-CDS-Ecto-sp6_S_contig10:2135870..2135909Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 2135871..2135909 +
1682348714.2898047-CDS-Ecto-sp6_S_contig10:2136452..21365511682348714.2898047-CDS-Ecto-sp6_S_contig10:2136452..2136551Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 2136453..2136551 +
1682348714.2976034-CDS-Ecto-sp6_S_contig10:2137081..21371671682348714.2976034-CDS-Ecto-sp6_S_contig10:2137081..2137167Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 2137082..2137167 +
1682348714.3052218-CDS-Ecto-sp6_S_contig10:2137523..21375931682348714.3052218-CDS-Ecto-sp6_S_contig10:2137523..2137593Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 2137524..2137593 +
1682348714.3131697-CDS-Ecto-sp6_S_contig10:2138098..21382751682348714.3131697-CDS-Ecto-sp6_S_contig10:2138098..2138275Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 2138099..2138275 +
1682348714.320768-CDS-Ecto-sp6_S_contig10:2139228..21393771682348714.320768-CDS-Ecto-sp6_S_contig10:2139228..2139377Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 2139229..2139377 +
1682348714.3294506-CDS-Ecto-sp6_S_contig10:2139785..21398611682348714.3294506-CDS-Ecto-sp6_S_contig10:2139785..2139861Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 2139786..2139861 +
1682348714.338088-CDS-Ecto-sp6_S_contig10:2140417..21405131682348714.338088-CDS-Ecto-sp6_S_contig10:2140417..2140513Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 2140418..2140513 +
1682348714.3455837-CDS-Ecto-sp6_S_contig10:2141057..21411291682348714.3455837-CDS-Ecto-sp6_S_contig10:2141057..2141129Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 2141058..2141129 +
1682348714.3527281-CDS-Ecto-sp6_S_contig10:2141516..21416241682348714.3527281-CDS-Ecto-sp6_S_contig10:2141516..2141624Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 2141517..2141624 +
1682348714.359763-CDS-Ecto-sp6_S_contig10:2141700..21418381682348714.359763-CDS-Ecto-sp6_S_contig10:2141700..2141838Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 2141701..2141838 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.628.1prot_Ecto-sp6_S_contig10.628.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig10 2131882..2141838 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig10.628.1

>prot_Ecto-sp6_S_contig10.628.1 ID=prot_Ecto-sp6_S_contig10.628.1|Name=mRNA_Ecto-sp6_S_contig10.628.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=532bp
EDERIRREREDQEKRRQKQHIDRLAKQVKALMERVYEFREQAARAKQEVA
SQQEENKELKMRIEQMREDHSEMMVAQARGGLTGGINRANARDSKNTRDR
DAEMRRRRLAKNALLAGVVEEEEDLVITLEGISTSSLAQLSGRFYRWLGK
KLPLGADVRAIQVVSATVKWIREDKIRKELFIVDEEQKHVQFAKTFLVGW
DNSLSNQQEVEDYRMSNGLAAANMLAEVSQADASATRSLDDKIWLYSYRC
FGFALYVGVQMAAWAAIIFLTAESDNVASGLAQQLQSVAWISQAAAVIST
SIVPATVTVINAIMPIIIKAITKLEKWDMERTVTYMLTIRMFLAKILNAF
IQALSYLLLADPYLFAGQQYTIIINRGRVEQNFEPSGFDCRLDQAGAGLF
QLVVTEFVFSKIINYATLRAAQVKARYSKKLFVKPEFEVAKRMVGLLYFQ
ALILAAYPFFPMGTVFVAPFLILSFKFEKKLLTAFQVYRSLSEHDMTKAR
IWVSVVMSGVGSNGHEEICRDTSFRRCHSTV*
back to top

mRNA from alignment at Ecto-sp6_S_contig10:2131882..2141838+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig10.628.1 ID=mRNA_Ecto-sp6_S_contig10.628.1|Name=mRNA_Ecto-sp6_S_contig10.628.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=9957bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:2131882..2141838+ (Ectocarpus species6 EcLAC_371)
GAGGATGAAAGGATCAGGCGGGAGAGAGAGGACCAGGAGAAGAGGCGACA
GAAGCAGCACATAGACCGCTTGGCAAAGCAGGTTAAGGTGAGAGGAACCC
TCCATAGAGGGTAAACGGTGTGAACCCCTGCCTTGAAAATCTCGGCCGAA
TTCTGGGACAGCCTGCAGGTTTTTCGTGGAACGTGCTTGGCCAGCAGAGC
GGCTGACGGCTGACCAACCCAACTGTATGGGCGTCGCACGATCGCCGAGA
GGTACTATCGCACGGGTAGACGAACGTTTCGCCCTGACAGACACCCGGGA
ACAAGCGGTTGAAGGGTGTACATTGCAGCGCAGATAGATTAAATCGTTCG
GCCCTTGAAGGTCTTGAGCCGATCTCGTTTTGGTTGGGGCTGAAAAACGT
GGTCATTCGGTTTTGTTGAACGTCGCAGAATGTCCCAGACTCTGACGGCG
AACGGGTGCACATCTACCGACAGTATATGTCTGAAAACCGAAAGTTGCGC
TCAAGGTACACACTGAGTATTGGTGTGGAAGGAACCCGATACGGAGAAAC
AATGTTTTTCCCATGCTCTATCTGGGCTATCGCCAGACCCTCGTCAACCT
TCTTTTCTCAAGTTCAAACTGACTGGGTGTGCCGCAGGCGCTGATGGAAC
GGGTATACGAGTTCCGAGAGCAGGCGGCGAGGGCCAAACAAGAAGTGGCC
TCGCAGCAAGAGGAGAACAAGGAGTTGAAGATGAGAATAGAGCAGGTATG
AATAGCACCGGCCCAATCATAAGAACAAACTAGGCTGAGACTCAAGCAAG
AATGTGTAACAACTGTCGAACGCCGGCGCAGAGCTCTACACTGGCTCTTT
AGACAAATGCTCAGCCTTCGTCCCACAAAAATAAAACCAGGCTGAGTCTG
TTATTGTTGTGGTCCTACTGATTGGGCCGATAATGTATGGGTTGTTGCCT
TTCCCGAAGACACCCGGCACTTCCTCGGTTGAATCGCACCGGGGGTTCTT
GATTATGTTCGACTTCCACGAAGGACACGAGCATATGCAACTACGTAGGT
AGCAGCCGCTGCTGTGGGGTAACTGTTGTTGCCTGATATTATTGAGGTTT
AAAGTCTGATTTCGCAAACCATTCGTCACCGCGAACCGGTCGCGTGACCC
ACACCGATACCCCCCGGCTTAAACCACGCATGCACCCGTTTCTACGCTTC
CAAGGGAAACCCTTTTGCGGCCCTATATTCCGCCGTGCTGCCGCTGGATG
CCTTGCTTGCCTATCCACAGAAAATCTCCCACGTCAGAACGTTCTTCCGT
TTAACTATCTTCACCTCTTGAGACGTAGTGGTATAATGTAAAGAAATATT
CAACAAAGTTTACTATTTCTCCACTTGGGTATCGCGTTGCACGGCAAAGC
CCACTCTGCATGTCCCCCTGGTACCCTCCCGGCCCGATGTATGTCGAACA
ACTCCGTTGAAGTCTCTTAGCTTTTCCACCTGCAGTTGGGTCTCTCAATA
GCCCGGTGACCAGTGCGTGCGAACCCAAAAGCCCTGGTCCGGACCTTCCC
CCCCCCCCATCATTTGCCGTATGCCGGCATGGTGGCCAAAAACGCGCTTC
TGATAGTCAAGACACCTCCACACACTAGAAAGCGTCTTGAACATGGGTCC
GGTTCCTTTGCTAGGTTGAGGAACAGAAACCTCGATTTCGGACGTGTTCG
GGGGCTGTCTGTCATTGATGTTTGTGCTCTAGAGGGTCGTCAACTCCTCT
ACAGGCGTTTCCCGTGTTTGCCAGCACGAGAGAGAGAGAGGGATGGAACC
CCCAGGCACCTTTGAAAGCCTTTTTCAGTGCGTGCGAAAATCGTATAAAT
GCAATACAGAGAGGCAGAGGGCGAGGGTAGTTAGAACGTGCAAGCGAAGG
ACAATAAGTGGGACGAACGACAACAACAGAAATATGAACAATATTAATGT
CAATAACTATGTTAACAGATGCGCGAGGATCACAGCGAAATGATGGTGGC
CCAAGCGCGAGGCGGCTTGACGGGCGGAATAAACCGTGCAAACGCCAGGG
ACTCGAAAAACACCAGAGACCGGGACGCCGAGATGAGAAGACGTCGGCTC
GCCAAAAACGCTCTCCTGGCGGTAAGAGCAACTTGCGTGGCTTCGAAACA
CGAGCACCTGACCCGATCGAAGATTCGTGCTGCTGTGATGGAAGGGGACA
AGAGCACTTGGCCAAACATATGAGCTGTTCAGACAGGCATGCGTGATGTG
CGGCGTAGAAAGAAGAGAGTTCAGGTTTTCACAGGAACGCGTTTCGAATT
TCCCGGGTAAGTTCCATACCCTTAGAGTGACTACACGCACACGCCGCGCG
ACTATCGTTCACCACTTTGAGGCGCACTATGTTTGTAGGAGGAGCTTGTG
GAAACGCCGGAAGACACACATCAACCCCTCTCGAAGGAGCTTCGAGCAGG
CTCCTTACCTCAAATCAGAAGCACACGCAGGAAAAGCTTCACGATAAAAT
AAGCACGTGGTGTACATGCCTAGTCGATGAGTGTGCACATGAATTGGCGA
CCAAATGACTGGGGACGAGGAGAACATGGCAATATCTGTTTCTTCCCCTC
CCTCTTTCGAGCGAGGTAAGGTCGATCAGATCAGTCCGCTTGACCGGAGG
CATGCTTCACGTGTACAACCGGAGGCAAAAATTGCAGAATCAACTGCGCT
TCGCACGTCAATCGCGGTCGTGTCGTAGTGAGGACCCTCACACCCAACGA
CTCTCGTGTGCGGCAGGGAGTAGTGGAGGAGGAGGAAGACCTGGTCATCA
CTCTCGAGGGAATATCGACAAGCTCCCTGGCGCAGCTCAGCGGGCGGTTC
TACCGCTGGCTCGGGAAGAAGTTACCCCTAGGGGCAGACGTCAGGGCGAT
TCAGGTAACATGAAACGGCCATGTCAGTACATACCCAAACAACTGCTGCC
TGCTGGATTTTTGTGCGAAGCTTTAGCGTGTGAACAAAGCAGGGTGAACA
ACAACAACAACAACATCGAATGATCGCGGTGCAGGCCCGATACGGATCTG
CGGTGGCTTCGTACTTCCACTTCTACCGTTGGCTCGTCGGCACCTACATT
TTCATCGCCAGCTTAAGCCTAGTGTGGATAGTGTTTCACGTCTTGAAGCA
GGTCAACCAGGGCAGTGCCTCCGTCTTCAGCGCCAGTCTTGTCGGTGAGA
TGATGGCGGCGCAACAGTCAGTTGGCGTAGTCCCCACCCCCCAGAAAACA
CATTGTGAGAACCTACCTCCCTCACATGTTCTATGGCCTACTGAAGAATG
ACAAGGGCAGCTGAAAGTATCCGGCACGGAAACGGTTGGAAATGGAGTTC
CTGTTCAGGAACCGAGTTTCTGTTGAGGAACCGGGATGATGCTGCGTCTC
GACAGTCATGCGTGCTTAGTGACTACTTGTAAAACAATACGATCTTCTCC
TGCAGTATTGCCATGGGCACCACCCAACCCGGAAAGGCTTTGTCTCGCCT
CGATCGCTCTGGGATAAGAAGGAGAGGAGTGTCTCGAGGCCTGGAGGTAC
GCACACACCCGCCCCTTCGCGAAGTAACTCCGCCGATTGTTCTATTCCCA
CGCGCCAAATAACGATCGAGATCTGCTACCTTCGCGAAGAAAATGCACCA
ACTGGCTCCCAAACACGCCAAATAAACGTTCGGGATCACTTTGAGTCACC
CGGTAGTAACAAGTGATGACTAACGTTGAGTTCAACCGAAATTCTGCGTT
TGCAACGCCCGGTGGAAACGAGATACCACCTAAAAAAATAAAAATAAACT
CGTAGAGGATCAACACGGTTGCTAATACATAATCGGGATCCGCTACCCCC
CCCCCTCCCCCCCGCCGAAACGGAACGAAACGGCACCAACCCAAAAGGCA
TCATCCCGTCCTTTCTGGCGTACTCGAGCTTCGACTCCTCCAACCGAAAC
CTGTACGCCATCATGGTGGTGCTCACCACGACCGTGCAGGTCGTCTCGGC
CACGGTCAAGTGGATCAGAGAGGACAAGGTGCGAGAGGGGGATGGTGGGG
GGGGGACTGCGGGCCACAATACAAGTCTAACGTCTTTTTTGGGGTCGAGT
TTCTCATGCTATGGAATATGCTGGTGATGTCTCCGACACGCCTCTCGTCG
GCAAAAGAGCAATTCTGATTGTTCCTTTCAGAAAGACCGTTCTGCTGTTG
ATGTCGGTGAGGAGCGTAGGGTCTGCGCCCCCTCGCCTCGCCCGCCAGCC
AATCCTGAAGGTACCTTATAAGAAATACCAGAATCACATTGACGCGTCTC
TTCTTGTTGCTCAATGAAGCGGCCCTTGTTGAAACGGCGACGGTAAGGAT
GTGTGCTTGATATGCTCTGAAGAGTTTTTTTAAGGTCAACCCCGCTAGAT
TCTGTGAACACCACTGACTGCTGTTGAGCATCGCCAAGCACCGTGGCGCG
GCTGCTGACGCCGAAATCAACCTCCAAGGACACGGCCCGTAGGGACCTCC
CTACTCGCGGTACAAGCTCCTCCGCACTTACCGCTTGCTGCCCACGGTGT
TCTCCCGACATGGCGGTGCAGATTCGCAAGGAGCTCTTCATTGTGGACGA
GGAGCAGAAGCACGTACAATTCGCCAAGACTTTCCTCGTCGGCTGGGACA
ACTCTCTTTCCAACCAGCAGGTGGGCGTCCCGCGTCGCCGATGGCCCGAC
TTTAACCCCAAACCTCGCGCTGGGTCCGGGGATGTCGCAAGAATCTGACG
TCCCTTTCGTTGCAGTATGTGAGATTCGAATGGATGTAGTCGTTGTGTTG
GGTTGAGTACAGCGGAGGCTGGTGAGGCTCTCTTATGGTAAGACCCACAA
GGGCGAGGGATGCGCAGCCAGCTGGTTGTTGTAGGTATGCACTTTGAGGC
AAGAAAATCGAGACGCCTACTACTCCTTCGGTGTTCACAGGCCAACTTGA
ACGTGGTTTAGTCAGTAGAGGGGATAGAAAAGCTATTGCGTTGGCATTAT
GGCAGGGAAACCCCAACCAAATCGACGGTGGTGTTCGTTTCTACTGGTGA
ATCCGGAAGTTACAAAAAATGACCTCTGTTGTCCTGAACACTCTTGTTAG
ACGAAGCACATGCACGTACGTGTCTCCAAAATCTGGCACCTTTCAGTGCC
ACGGCCACTTTGGTCCTGCTGCTGAACTCAAAGTTCAAATGGTTTTGCAG
GAGGTGGAGGACTACAGGATGTCCAACGGGCTGGCCGCCGCCAACATGCT
CGCTGAAGTGAGCCAGGCGGACGCATCCGCCACGAGGTAATGTGCGCGTA
AGGCTCAACCCCTCGGGCAATCACCAGACACCGCAGTTCTTATCAGGTTC
CAGATTATTCTTTGGGTACGTGTTGTTGCCAAACACCGGCGAAATAAAAA
ATGTATATGTGACTGTGGAACACCCGCGGGTAACTGAATATTTAGTAACT
GAGGGGAAAACGTTGACATGCAGAACTGTGTACGTTGCAGGGTGCATTCG
AGTCGCTGCATCCACCCACCTCCTTCGAAAGGCTATCCTTCTTTCTCTTT
TCGTCGTATGTGGCTCACTCGGTGCTAATTGATGAACCTGAAAAACGACG
AAGCGCGAAGAACGTTCCCCTTGCTTCCCCCTCGTTCTCCAGGAGCTTGG
ACGACAAGATTTGGCTCTACAGTTACCGGTGCTTCGGCTTCGCCCTGTAC
GTGGGTGTGCAGGTGCCCGAGCTCTAGAATACACCGAGCCGAAATGCCGT
GCCAGAGAGCTAGCGCGTAGAAAACCGCGACAGACAGGCGTCCGAAATAT
TTTCTGGAGGATACTGCTGCGTCGGTAGAGAAACTATTGTGGGAGACAAC
GTAACACCGTTGTTGGTTGTTCAACCTTTGGAGGACGAGTAGCCGAATGG
ACGTCGTTGGTCTACTCCTAGCCACCGACAAGGTGCCAACGCCGATACCA
ACAGTGCTTGCACGAGATAAAACAGAAAAACAGGTTTCAGATATTGCTGA
ATGACGGCGGGTGCTCTTTCTCCTTTTGGTCTCCAGATAACCGTGCGGGT
GGCGAGTATCCGACACGCTCCTCAACAACCGAGCTACGCCATACAAACCG
ACCATCCGGGCCACAAACGATGATGTCCACACAATTAGACTTAAGTATCC
ACGGGATTCGGTGACAACCAACCCCGTGTTCGTTTTTTGTCTCTTTCTTT
CTTTGTTTGGTTTTCAGATGGCCGCTTGGGCGGCGATCATCTTCCTCACG
GCCGAGTCCGACAACGTGGCTAGCGGCCTCGCGCAGCAGCTGCAGTCCGT
CGCCTGGATCTCCCAGGCGGCCGCCGTCATCTCGACTTCGATCGTGCCGG
CGACGGTGACCGTCATCAACGCCATCATGCCGATCATCATCAAGGTGTGT
GAGACCAGCGGTGGCTCGAAAAAGGCTCGAAAGAGGAATTATTGGTGGGG
AAAGTAGCCACACCACCAAGGTGCTATAGACTATCGCAAGAACGGGTTCG
AAGAGAAGTTACCGGATTGCGATGTGCAATCTGGGAATTGGCTTGTTTCG
CCGTGCAATCAATTCCGTCCATGTCTTACTTGTCTAGCCAGAACTCAGCG
CATATTTGTCTTTGTAGGATTGGGTCTTTGCAGGAGCTGACGTTGCCCTC
ATTGTCACGAGGATGCTGTTGTCGTACCGCGTTTTCACCTTAAAGCAGAT
GTTTCTCGTGCTCGACAAGGGGGTCCAAATCGTCATCCGCGCCCTCAGAC
CATCAACAGTATTTTGAGGCCTTGGGTAGCCTGTTCAAAAGCCGCCACAT
CTCTCTCGTCTTGCTTGGGTGTACACTATGCATCCCTCAAACATTTTGGA
TCATCATTCGTTAGCAACCCTGGCATACAACCCAGTCCTCACCCTAACCG
TGGGGCACGATGATGAACGAGTAAGCGAAACATGGCACGGCCAGGGACCC
TACGCATCGTCGAACAAAATCACCATTGTTATCCGTTTCAACCAGTTTGT
AAGGCCTCAAGTGTTATCGACGTCACTTTTGCCGCTTCAATGCTCACGCA
TATGTTCGCCCCCACTCTCCTAGACAAGTCGCTACAGTCATGTGATGGCC
ACGAACAATAACATTTTCAAGGGATGTACGATATTCTTGTCGAATCCACA
AAAACACACCCCTCCGCATGTACATCGCCCAGGGAAAAGGGGGGATACAT
GCTACGAATGCCGTGGAGATGTTCTTAAATAGTCGAAACGCCCCGTGGAG
CATACAAATCTTATCGGTGTTGGTCATCCATGAAGTTGTTCAAGGTTTGA
GAACACGCACGCGTGTGCCTGATACATGCTGCTGTTTCGAAATCCAGGCA
ATCACCAAGCTGGAGAAGTGGGACATGGAGAGGACCGTGACGTACATGCT
CACGATTCGGATGTTCTTGGCCAAGATCTTGAACGCCTTCATCCAGGCTC
TGTCGTACCTTCTCTTAGCCGACCCGTACCTTTTCGCCGGACAGCAGTGA
GAGGATAATCGTTAGAAAAATGCAGTCTTATGTGTTTGATACTTAAATAT
GGTCGAAATGCTGAATGGGAGATAGAGAGATGGGGGAGGGAGAAGGGCGG
GCGCCGGGAGAGGGCGAACGGAGAGGCAGAGGTAGAGGCAGATGGAAACA
TAGACAGACAGGTAGGGAGAACGATGTCGCGGGCAAGAGAAGAACGAGAG
CTAACAATAGTACCCTCACGAAGAAGGCCGCTTGTTATTTTCAAGTCGAT
TTTTTTCCCCCGCGGATCGCTGTTGTGCGAGCAGAAACAACGAACATACG
GGGTATCACCAAGCGTACTAAATGCTGATGTGTTGTAGCTTTCCGAAAGA
GTACTTGAACATTTTCCGTGCTTCGTGTTTCTGTACCATTCGTTGTCTTT
ACAGGTACACAATCATTATCAATCGGGGCCGCGTGGAGCAGAACTTTGAG
CCATCAGGGTTTGACTGCCGGTTAGATCAAGTGAGAAAACAACACCACGA
GCAAACTCGCACAACAAGTGACTGTTTCCGTTGTTGTTGTTGTGGGCGCT
TTGCTTAGACTGTTCTAATAGTGTTCTGTCTGGACTGCACTGCTACTTGT
TCTTCACCCCACAGAAAGCCCCCTCCGTTGCGCACTATATACCGTATGTT
GCAATTTTGACGTCGATGCGACTCGGTAGCCATCGAAGGGGGGCAAACAA
AGAGGGCGGTGATAACTGTTTGCTTGCCTCTACATGTCTTGTGTCTGTGC
TTGTGGTTTCCTCCTATTTAGCATTCTACGACCGACCATGGTCCGGTAGT
TTGAGCGAAAGCACAATGTAGACGAAGAACCTATCGAAATCATCACTAAA
ACTCTCTGTTTTTCTTGCTGTTTACAATTCTCATCCCGTTGCAATCGAAA
ATGCCGCTTAGCATCATAAAAAGGGGCAGTAGTCGTGCATGGCTACAAGC
TCAAACTCGAGATGAATGCCGTTTGTTGGTTTTCTTCCTCGTTTGTCGGC
CTCCCAAACATGAACCACCTTTTCTCCGCCTCCAAGGCTGGGGCAGGCTT
GTTCCAGCTGGTAGTAACCGAGTTCGTTTTTTCCAAGATCATCAACTACG
CGACTCTTCGAGCTGCCCAGGTCAAAGCCCGGGTAAGTACACACCAAGCA
GCTACAACAGTAGACGGTCATTGTGCTTGGCTAGATGAGCAGACAGAAGG
CCTGGTCCGTCGTGAAATTCTGAAGGTAGCATAGCATTGACAGAGGGTAC
GCTGAGGAAGATCGCAGGAGGGTCTGCTTCTTTCTTTTCTTTGTTTAGAT
AGGGTAGTCGTAAGGAGGTCGTAGCCGGGCACCACAATATATCAATCCCG
CAATCTGAGCCATGGTTCAGATGGACCCAGCCAAAGAGCAAGAAAACAGT
ATTCACCAACGCATACCTTAGGGTCTTGATATATTGTGAAAGAAGCCGGC
CACGGAAGAGGCCCACGAAATGAATAGTGAGAGACAGACAAACGTATCTC
CAGCACGCCCTGGCTTTCGTTTTTCCGAGGGAAGAACGCCTGCCTCGCCC
AAATCAATCTTGTGGCCACATACATGGCATCTTTTTTTAGGCTGAAATGC
TATTCAGTACCTGCTGTTTTAGCTCGATTTGCACGTGTGACCAGCTGCCC
TTGGTGTGTTGCGTGTCTACTTTCAGTACTCCAAGAAATTGTTCGTGAAG
CCGGAGTTCGAGGTCGCCAAGCGCATGGTGGGGCTACTTTACTTTCAGGT
ACCAACGGTTCAGTTGTTGTCGAAGTTGTTGCCGTGGTTGTATTCGTGGA
CGTTAGAACTCGTTACGACCTTTTCCCGTCACTCCTGTTCGACATGAAGA
ACACAACAGAAAAGACCAGGAGAATGCAGTCTTGTCGCTTGGAAAAAAAG
CGCGTTCAATAAACGTACAGATAGAGATGGACCTCGATTGTGTTTCAAAA
GAGGAAGCAACGCGCATTTGTCGACCATCGGGAAGAGACCGAGATACAAC
TCGGTTTTCTTGTTTCAACACCTGAAAGATGTGCAAACCCGCATCGTACT
CTGTTGCTGGTCTCAAGGCATACCCAATATCGTCCGTACCGGCCTTACCC
TCCCCCTCCCCTTGCTCGTACCCTTCGTGCTGCAGGCCCTTATCCTGGCG
GCGTACCCGTTCTTCCCGATGGGCACCGTGTTCGTGGCGCCGTTCCTCAT
CCTGTCCTTCAAGTTCGAAAAAAAGCTTCTCACCGCATTTCAGGTGCGGT
TCCTATTAATAGTATGCCGGGGGCGTGTCTACCTGAGAAACTGCTGGATA
AACTTTAACCTTCCTCCAGGTCTACAGATCACTTTCCGAGCATGACATGA
CCAAAGCAAGAATTTGGGTTTCGGTCGTGATGAGCGGTGTCGGCAGTAAC
GGCCATGAAGAGATTTGTAGAGACACGTCGTTCCGTCGTTGCCATTCGAC
TGTCTAG
back to top

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig10:2131882..2141838+

>mRNA_Ecto-sp6_S_contig10.628.1 ID=mRNA_Ecto-sp6_S_contig10.628.1|Name=mRNA_Ecto-sp6_S_contig10.628.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1596bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:2131882..2141838+ (Ectocarpus species6 EcLAC_371)
GAGGATGAAAGGATCAGGCGGGAGAGAGAGGACCAGGAGAAGAGGCGACA
GAAGCAGCACATAGACCGCTTGGCAAAGCAGGTTAAGGCGCTGATGGAAC
GGGTATACGAGTTCCGAGAGCAGGCGGCGAGGGCCAAACAAGAAGTGGCC
TCGCAGCAAGAGGAGAACAAGGAGTTGAAGATGAGAATAGAGCAGATGCG
CGAGGATCACAGCGAAATGATGGTGGCCCAAGCGCGAGGCGGCTTGACGG
GCGGAATAAACCGTGCAAACGCCAGGGACTCGAAAAACACCAGAGACCGG
GACGCCGAGATGAGAAGACGTCGGCTCGCCAAAAACGCTCTCCTGGCGGG
AGTAGTGGAGGAGGAGGAAGACCTGGTCATCACTCTCGAGGGAATATCGA
CAAGCTCCCTGGCGCAGCTCAGCGGGCGGTTCTACCGCTGGCTCGGGAAG
AAGTTACCCCTAGGGGCAGACGTCAGGGCGATTCAGGTCGTCTCGGCCAC
GGTCAAGTGGATCAGAGAGGACAAGATTCGCAAGGAGCTCTTCATTGTGG
ACGAGGAGCAGAAGCACGTACAATTCGCCAAGACTTTCCTCGTCGGCTGG
GACAACTCTCTTTCCAACCAGCAGGAGGTGGAGGACTACAGGATGTCCAA
CGGGCTGGCCGCCGCCAACATGCTCGCTGAAGTGAGCCAGGCGGACGCAT
CCGCCACGAGGAGCTTGGACGACAAGATTTGGCTCTACAGTTACCGGTGC
TTCGGCTTCGCCCTGTACGTGGGTGTGCAGATGGCCGCTTGGGCGGCGAT
CATCTTCCTCACGGCCGAGTCCGACAACGTGGCTAGCGGCCTCGCGCAGC
AGCTGCAGTCCGTCGCCTGGATCTCCCAGGCGGCCGCCGTCATCTCGACT
TCGATCGTGCCGGCGACGGTGACCGTCATCAACGCCATCATGCCGATCAT
CATCAAGGCAATCACCAAGCTGGAGAAGTGGGACATGGAGAGGACCGTGA
CGTACATGCTCACGATTCGGATGTTCTTGGCCAAGATCTTGAACGCCTTC
ATCCAGGCTCTGTCGTACCTTCTCTTAGCCGACCCGTACCTTTTCGCCGG
ACAGCAGTACACAATCATTATCAATCGGGGCCGCGTGGAGCAGAACTTTG
AGCCATCAGGGTTTGACTGCCGGTTAGATCAAGCTGGGGCAGGCTTGTTC
CAGCTGGTAGTAACCGAGTTCGTTTTTTCCAAGATCATCAACTACGCGAC
TCTTCGAGCTGCCCAGGTCAAAGCCCGGTACTCCAAGAAATTGTTCGTGA
AGCCGGAGTTCGAGGTCGCCAAGCGCATGGTGGGGCTACTTTACTTTCAG
GCCCTTATCCTGGCGGCGTACCCGTTCTTCCCGATGGGCACCGTGTTCGT
GGCGCCGTTCCTCATCCTGTCCTTCAAGTTCGAAAAAAAGCTTCTCACCG
CATTTCAGGTCTACAGATCACTTTCCGAGCATGACATGACCAAAGCAAGA
ATTTGGGTTTCGGTCGTGATGAGCGGTGTCGGCAGTAACGGCCATGAAGA
GATTTGTAGAGACACGTCGTTCCGTCGTTGCCATTCGACTGTCTAG
back to top