mRNA_Ecto-sp6_S_contig10.610.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.610.1 vs. uniprot
Match: A0A6H5KGH9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGH9_9PHAE) HSP 1 Score: 102 bits (255), Expect = 2.410e-23 Identity = 53/62 (85.48%), Postives = 54/62 (87.10%), Query Frame = 1
Query: 112 EGEEISGGIIVTDMDTIEKSNLNRQFLFRSRDVGKAKSAAXXXXAARMNPALRIRPLEKKVG 297
E EE GGIIVTDMDTIEKSNLNRQFLFRSRDVGKAKS A AARMNPAL+IRPLEKKVG
Sbjct: 354 EREESRGGIIVTDMDTIEKSNLNRQFLFRSRDVGKAKSVAAAAAAARMNPALKIRPLEKKVG 415
BLAST of mRNA_Ecto-sp6_S_contig10.610.1 vs. uniprot
Match: A0A835Z5W8_9STRA (UBA_e1_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5W8_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 1.760e-16 Identity = 41/55 (74.55%), Postives = 46/55 (83.64%), Query Frame = 1
Query: 133 GIIVTDMDTIEKSNLNRQFLFRSRDVGKAKSAAXXXXAARMNPALRIRPLEKKVG 297
G+IVTDMDTIEKSNLNRQFLFR+RDVG+AKS A A MNPALR+ PL K+VG
Sbjct: 581 GVIVTDMDTIEKSNLNRQFLFRARDVGRAKSEAAAAAARAMNPALRVAPLLKRVG 635
BLAST of mRNA_Ecto-sp6_S_contig10.610.1 vs. uniprot
Match: A0A7V5I5S4_9BACT (UBA_e1_C domain-containing protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A7V5I5S4_9BACT) HSP 1 Score: 73.9 bits (180), Expect = 4.150e-13 Identity = 34/56 (60.71%), Postives = 43/56 (76.79%), Query Frame = 1
Query: 130 GGIIVTDMDTIEKSNLNRQFLFRSRDVGKAKSAAXXXXAARMNPALRIRPLEKKVG 297
G I +TDMDTIE+SNLNRQFLFR+ D+G++KS A A R+NP L +R LE +VG
Sbjct: 543 GSIAITDMDTIERSNLNRQFLFRATDIGRSKSLAARDAALRLNPELNVRALEMRVG 598
BLAST of mRNA_Ecto-sp6_S_contig10.610.1 vs. uniprot
Match: A0A7S3XY88_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY88_HETAK) HSP 1 Score: 70.5 bits (171), Expect = 9.480e-13 Identity = 38/61 (62.30%), Postives = 43/61 (70.49%), Query Frame = 1
Query: 112 EGEEISGGIIVTDMDTIEKSNLNRQFLFRSRDVGKAKSAAXXXXAARMNPALRIRPLEKKV 294
EGE G + VTDMD IE+SNLNRQFLFR DVG AKSAA A R+NP ++ LEKKV
Sbjct: 1 EGEG-GGRLTVTDMDAIERSNLNRQFLFREADVGSAKSAAAARAARRLNPDFQVVALEKKV 60
BLAST of mRNA_Ecto-sp6_S_contig10.610.1 vs. uniprot
Match: A0A2E3C0Q2_9PROT (UBA_e1_C domain-containing protein n=1 Tax=Magnetococcales bacterium TaxID=2026759 RepID=A0A2E3C0Q2_9PROT) HSP 1 Score: 72.4 bits (176), Expect = 1.430e-12 Identity = 34/56 (60.71%), Postives = 41/56 (73.21%), Query Frame = 1
Query: 130 GGIIVTDMDTIEKSNLNRQFLFRSRDVGKAKSAAXXXXAARMNPALRIRPLEKKVG 297
G ++VTDMDTIEKSNLNRQFLFRS D+GK KS A RMNP +++ E +VG
Sbjct: 418 GNMVVTDMDTIEKSNLNRQFLFRSTDIGKLKSVAACDAIKRMNPDIKVESHENRVG 473
BLAST of mRNA_Ecto-sp6_S_contig10.610.1 vs. uniprot
Match: A0A1V0SCZ9_9VIRU (E1 ubiquitin-activating enzyme n=1 Tax=Indivirus ILV1 TaxID=1977633 RepID=A0A1V0SCZ9_9VIRU) HSP 1 Score: 72.4 bits (176), Expect = 1.430e-12 Identity = 34/56 (60.71%), Postives = 41/56 (73.21%), Query Frame = 1
Query: 130 GGIIVTDMDTIEKSNLNRQFLFRSRDVGKAKSAAXXXXAARMNPALRIRPLEKKVG 297
G II+TDMDTIEKSNLNRQFLFR +D+GK KS +MNP + I PL+ +VG
Sbjct: 418 GKIIITDMDTIEKSNLNRQFLFRDKDIGKPKSTTAANAIKKMNPDILITPLQDRVG 473
BLAST of mRNA_Ecto-sp6_S_contig10.610.1 vs. uniprot
Match: R7QQ62_CHOCR (Ubiquitin-activating enzyme E1 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQ62_CHOCR) HSP 1 Score: 72.4 bits (176), Expect = 1.430e-12 Identity = 35/57 (61.40%), Postives = 43/57 (75.44%), Query Frame = 1
Query: 127 SGGIIVTDMDTIEKSNLNRQFLFRSRDVGKAKSAAXXXXAARMNPALRIRPLEKKVG 297
+GG+IVTDMDTIEKSNL+RQFLFR D+GK KS A RMNPA+++ E +VG
Sbjct: 427 NGGVIVTDMDTIEKSNLSRQFLFRDTDIGKPKSIAAAGAILRMNPAMKVVAHEIRVG 483
BLAST of mRNA_Ecto-sp6_S_contig10.610.1 vs. uniprot
Match: A0A6G3ME91_HENSL (Ubiquitin-like modifier-activating enzyme 1 (Trinotate prediction) (Fragment) n=1 Tax=Henneguya salminicola TaxID=69463 RepID=A0A6G3ME91_HENSL) HSP 1 Score: 72.0 bits (175), Expect = 1.860e-12 Identity = 34/61 (55.74%), Postives = 44/61 (72.13%), Query Frame = 1
Query: 115 GEEISGGIIVTDMDTIEKSNLNRQFLFRSRDVGKAKSAAXXXXAARMNPALRIRPLEKKVG 297
G++ G I+VTDMDTIEKSNLNRQFLFRS+D+G KS A ++NP + + PL +VG
Sbjct: 451 GQQSKGSIVVTDMDTIEKSNLNRQFLFRSQDIGSFKSEAACRVIKKINPDIHLIPLLHRVG 511
BLAST of mRNA_Ecto-sp6_S_contig10.610.1 vs. uniprot
Match: A0A2V3IUT3_9FLOR (Ubiquitin-like modifier-activating enzyme 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUT3_9FLOR) HSP 1 Score: 71.2 bits (173), Expect = 3.600e-12 Identity = 36/61 (59.02%), Postives = 43/61 (70.49%), Query Frame = 1
Query: 115 GEEISGGIIVTDMDTIEKSNLNRQFLFRSRDVGKAKSAAXXXXAARMNPALRIRPLEKKVG 297
G G IIVTDMDTIEKSNL+RQFLFR D+GK+KS+A MNP ++I P E +VG
Sbjct: 228 GSGPKGEIIVTDMDTIEKSNLSRQFLFRDTDIGKSKSSAAAAAIKVMNPTVKITPHETRVG 288
BLAST of mRNA_Ecto-sp6_S_contig10.610.1 vs. uniprot
Match: UPI00081196D5 (ubiquitin-like modifier-activating enzyme 1 n=1 Tax=Rhagoletis zephyria TaxID=28612 RepID=UPI00081196D5) HSP 1 Score: 70.9 bits (172), Expect = 4.970e-12 Identity = 34/56 (60.71%), Postives = 41/56 (73.21%), Query Frame = 1
Query: 127 SGGIIVTDMDTIEKSNLNRQFLFRSRDVGKAKSAAXXXXAARMNPALRIRPLEKKV 294
+G + VTDMDTIEKSNLNRQFLFR +DVG KSAA +MNP ++I P E +V
Sbjct: 462 NGQLFVTDMDTIEKSNLNRQFLFRPKDVGSLKSAAAAAATIKMNPQIKITPHENRV 517 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.610.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig10.610.1 >prot_Ecto-sp6_S_contig10.610.1 ID=prot_Ecto-sp6_S_contig10.610.1|Name=mRNA_Ecto-sp6_S_contig10.610.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=108bp TAAAAAAASDASSSAAAVVEDVAAAAEGDGGDGGNEDEGEEISGGIIVTDback to top mRNA from alignment at Ecto-sp6_S_contig10:1973463..1973786+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig10.610.1 ID=mRNA_Ecto-sp6_S_contig10.610.1|Name=mRNA_Ecto-sp6_S_contig10.610.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=324bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:1973463..1973786+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig10:1973463..1973786+ >mRNA_Ecto-sp6_S_contig10.610.1 ID=mRNA_Ecto-sp6_S_contig10.610.1|Name=mRNA_Ecto-sp6_S_contig10.610.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=324bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:1973463..1973786+ (Ectocarpus species6 EcLAC_371)back to top |