mRNA_Ecto-sp6_S_contig10.609.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig10.609.1
Unique NamemRNA_Ecto-sp6_S_contig10.609.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
[Close]
BLAST of mRNA_Ecto-sp6_S_contig10.609.1 vs. uniprot
Match: D7FVL3_ECTSI (ThiF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVL3_ECTSI)

HSP 1 Score: 759 bits (1961), Expect = 9.320e-275
Identity = 393/403 (97.52%), Postives = 397/403 (98.51%), Query Frame = 3 
Query:  303 MEGELVRESSSSSDNEAAGDGAGGIDEDLYSRQLYVMGKTAMAKMGKADVLISGMSGLGAEVAKNVVLAGVRSVTLHDDRPATLEDLSSQFCLGPEAAERGEGRARASVDHLRELNPYVDVRLVEGPLTEEAIEAGGYAAVLLVDETVGFQLRANEACRRAGTAFVSASSRGAFASLFCDFGDSFVVQDTDGEEALACLVGAIVREEEGEAGVGGGRWVVEAVDGERHDFQTGDTIRFEDLRDAEGALLDTPTQEFTVKNINPRKFSMEAGGWAAGETQRRACGGRAVQVKKPSKVSFLPLRKALRPGQVAKLTLPTDFGKLVLQPVHADPPVFVLRLHGGVAVTLALVEGVRRKGGPLRRPAGGPRRRPPAETVLQIDLRGRCRCHRVRASQEPGAYGSGLR 1511
            M+GELVRESSSSS NEAAGDGAGGIDEDLYSRQLYVMGKTAMAKMGKADVLISGMSGLGAEVAKNVVLAGVRSVTLHDDRPATLEDLSSQFCLGPEAAERGEGRARASVDHLRELNPYVDVRLVEGPLTEEAIEAGGYAAVLLVDETVGFQLRANEACRRAGTAFVSASSRGAFASLFCDFGDSFVVQDTDGEEALACLVGAIVREEEGEAGVGGGRWVVEAVDGERHDFQTGDTIRFEDLRDAEGALLDTPTQEFTVKNINPRKFSMEAGGWAAGETQRRACGGRAVQVKKPSKVSFLPLRKALRPG+VA+LTLPTDFGKLVLQPVHADPPVFVLRLHGGVAVTLAL EGV RKGGPLRRPAG PRRRPPAETVLQI LR RCRCHRVRASQ+PGAYGSGLR
Sbjct:    1 MKGELVRESSSSSGNEAAGDGAGGIDEDLYSRQLYVMGKTAMAKMGKADVLISGMSGLGAEVAKNVVLAGVRSVTLHDDRPATLEDLSSQFCLGPEAAERGEGRARASVDHLRELNPYVDVRLVEGPLTEEAIEAGGYAAVLLVDETVGFQLRANEACRRAGTAFVSASSRGAFASLFCDFGDSFVVQDTDGEEALACLVGAIVREEEGEAGVGGGRWVVEAVDGERHDFQTGDTIRFEDLRDAEGALLDTPTQEFTVKNINPRKFSMEAGGWAAGETQRRACGGRAVQVKKPSKVSFLPLRKALRPGRVAELTLPTDFGKLVLQPVHADPPVFVLRLHGGVAVTLALAEGVCRKGGPLRRPAGSPRRRPPAETVLQIGLRCRCRCHRVRASQKPGAYGSGLR 403
[Close]
BLAST of mRNA_Ecto-sp6_S_contig10.609.1 vs. uniprot
Match: A0A835Z5W8_9STRA (UBA_e1_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5W8_9STRA)

HSP 1 Score: 265 bits (677), Expect = 4.580e-74
Identity = 159/310 (51.29%), Postives = 192/310 (61.94%), Query Frame = 3 
Query:  375 IDEDLYSRQLYVMGKTAMAKMGKADVLISGMSGLGAEVAKNVVLAGVRSVTLHDDRPATLEDLSSQFCLGPEAAERGEGRARASVDHLRELNPYVDVRLVEGPLTEEAIEAGGYAAVLLVDETVGFQLRANEACRRAGTAFVSASSRGAFASLFCDFGDSFVVQDTDGEEALACLVGAIVREEEGEAGVGGGRWVVEAVDGERHDFQTGDTIRFEDL--RDAEG-----------ALLDTPTQEFTVKNINPRKFSMEAGGWAAGETQRRACGGRAVQVKKPSKVSFLPLRKALRPGQVAKLTLPTDFGK 1265
            +DE LYSRQLYVMGK AM +MGK+DVLI+G+SGLGAE+AKNV+LAGV+SVTLHD+RPAT  DL+S FCL P++   G+ RA  S+  LRELNPYV+VRL+ GPL   A+ AG Y  V  VDET+G QL  N+A R  G  FVSAS+RGAFAS FCDFGD+F V D DG+E  A LV  +  +             VE V  ERH F  GD +R E L  R A G           AL     +  +V        ++  GG A G     A  GRAVQVK P +V+F PLR AL P  V  L +P+DF K
Sbjct:   91 LDEALYSRQLYVMGKDAMLRMGKSDVLITGLSGLGAEIAKNVILAGVKSVTLHDERPATWNDLASHFCLSPDSV--GKPRAEESLAFLRELNPYVEVRLLRGPLPLGAVAAGAYGVVCAVDETLGAQLALNDAARAGGARFVSASARGAFASAFCDFGDAFTVHDADGQEPRAVLVSRVTAD-----------GCVEFVRDERHGFDVGDRLRLEGLEARGAAGXXXXXXXXXAAALEGRELEVVSVDGPFALHVAVAPGGLAEGA---EAVHGRAVQVKAPRRVAFRPLRAALAPPHVDALLVPSDFAK 384
[Close]
BLAST of mRNA_Ecto-sp6_S_contig10.609.1 vs. uniprot
Match: A0A6H5J7N3_9PHAE (E1 ubiquitin-activating enzyme n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J7N3_9PHAE)

HSP 1 Score: 214 bits (545), Expect = 9.380e-57
Identity = 133/308 (43.18%), Postives = 178/308 (57.79%), Query Frame = 3 
Query:  348 EAAGDGA-GGIDEDLYSRQLYVMGKTAMAKMGKADVLISGMSGLGAEVAKNVVLAGVRSVTLHDDRPATLEDLSSQFCLGPEAAERGEGRARASVDHLRELNPYVDVRLVEGPLTEEAIEAGGYAAVLLVDETVGFQLRANEACRRAGTAFVSASSRGAFASLFCDFGDSFVVQDTDGEEALACLVGAIVREEEGEAGVGGGRWVVEAVDGERHDFQTGDTIRFEDLRDAEGALLDTPTQEFTVKNINPRKFSMEAGGWAAGETQRRACGGRAVQVKKPSKVSFLPLRKALRPGQVAKLTLPTDFGKL 1268
            EA G G+  G+DE LYSRQLYVMG  A  +M  ++VLI G +GLGAEVAKNV+LAGV+SVTL DD  A   DLS+QF L    A+ G  RA A V  L ELN YV V    G +TE  I  G Y  V+++D  +  QLR N+ C   G  F+S  +RG FA  FCDFG+SFVV DTDG +A +C+V ++ ++  G         +V  +D +RH+  TGD + F  ++     + +   +EFT+    P  F ++    + G        G   QVKKPS +SFLPLR+AL   +     + TDF K+
Sbjct:   81 EAGGGGSKAGVDESLYSRQLYVMGHEAQRRMATSNVLIVGANGLGAEVAKNVILAGVKSVTLLDDGLAEWSDLSAQFYLSE--ADLGNPRAAACVSRLAELNRYVGVSTTTGEVTEAMI--GSYQVVVMIDAPLDEQLRVNDICHAKGVCFISCDARGVFAYAFCDFGESFVVSDTDGNQAASCVVSSVTKDAVG---------LVTVMDDQRHNLVTGDVVTFNSIQ----GMTELEGREFTITEKGPFSFEIDCDTSSLGTF----VSGYVNQVKKPSTLSFLPLREALSKPEPF---METDFAKI 364
[Close]
BLAST of mRNA_Ecto-sp6_S_contig10.609.1 vs. uniprot
Match: A0A024TML4_9STRA (E1 ubiquitin-activating enzyme n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TML4_9STRA)

HSP 1 Score: 205 bits (522), Expect = 8.270e-54
Identity = 126/301 (41.86%), Postives = 171/301 (56.81%), Query Frame = 3 
Query:  366 AGGIDEDLYSRQLYVMGKTAMAKMGKADVLISGMSGLGAEVAKNVVLAGVRSVTLHDDRPATLEDLSSQFCLGPEAAERGEGRARASVDHLRELNPYVDVRLVEGPLTEEAIEAGGYAAVLLVDETVGFQLRANEACRRAGTAFVSASSRGAFASLFCDFGDSFVVQDTDGEEALACLVGAIVREEEGEAGVGGGRWVVEAVDGERHDFQTGDTIRFEDLRDAEGALLDTPTQEFTVKNINPRKFSMEAGGWAAGETQRRACGGRAVQVKKPSKVSFLPLRKALR-PGQVAKLTLPTDFGK 1265
            +GGIDE LYSRQLYVMG  A  +MG+++VLI  + GLG E+AKN+VLAGVRSVTL DD PAT  DLSSQF L  +      GRA AS   L +LNPYV V+   G LT E +   G+  V++ + T  + L  ++ C   G AFV   +RG F S+FCDFGD+FVV D DGE+ + C+V +I  +         G+ +V   D  RH  +TGD + F +L  A+     TP     +    P  F+++        +   + GG   QVK+P  + F  LR++L  PG+     L +DF K
Sbjct:   13 SGGIDESLYSRQLYVMGHEAQRRMGESNVLIVNVDGLGVEIAKNIVLAGVRSVTLFDDAPATFMDLSSQFYLTEQDVVTHSGRAEASCQKLADLNPYVQVKKHTGKLTPEFL--AGFRVVVVCNSTRAYALELSDVCHSEGVAFVYTEARGVFGSVFCDFGDAFVVSDKDGEQPITCMVASITSDV-------AGKLLVTVTDDARHQLETGDFVTFRELEGADCLNGITP---LPITVTGPFTFTIDF------PSPVTSMGGYVTQVKQPLTLRFKRLRESLASPGEF----LTSDFAK 291
[Close]
BLAST of mRNA_Ecto-sp6_S_contig10.609.1 vs. uniprot
Match: A0A444TB13_ARMVU (E1 ubiquitin-activating enzyme n=1 Tax=Armadillidium vulgare TaxID=13347 RepID=A0A444TB13_ARMVU)

HSP 1 Score: 203 bits (516), Expect = 5.390e-53
Identity = 127/310 (40.97%), Postives = 178/310 (57.42%), Query Frame = 3 
Query:  345 NEAAGDGAGGIDEDLYSRQLYVMGKTAMAKMGKADVLISGMSGLGAEVAKNVVLAGVRSVTLHDDRPATLEDLSSQFCLGPEAAERGEGRARASVDHLRELNPYVDVRLVEGPLTEEAIEAGGYAAVLLVDETVGFQLRANEACRRAGTAFVSASSRGAFASLFCDFGDSFVVQDTDGEEALACLVGAIVREEEGEAGVGGGRWVVEAVDGERHDFQTGDTIRFEDLRDAEGALLDTPTQEFTVKNINPRKFSMEAGGWAAGETQRRAC---GGRAVQVKKPSKVSFLPLRKALRPGQVAKLTLPTDFGK 1265
            N + G G G IDE LYSRQLYV+G  AM +M  +DVLISG+ GLG E+AKN++L GV+SVTLHD +  T+ DL+SQF L  E  + G  RA AS   L ELN YV V     PLTE+ +    +  V+L D T+  QL+ +E C     + + AS RG +  +FCDFG+SF V DTDGE  L+ ++ +I +EE+          VV  +D  RH FQ GD + F +++   G       +   ++ + P  FS+       G+T+  +    GG   QVK P KV+F PL+++L+  +     + TDFGK
Sbjct:    7 NGSIGGGVGDIDESLYSRQLYVLGHDAMRRMATSDVLISGLGGLGVEIAKNIILGGVKSVTLHDTKETTITDLASQFFLTEE--DIGTNRAVASHQRLSELNTYVPVSTHTEPLTEDFVSK--FRCVVLTDSTLDEQLQLSEICHEKNISLIIASVRGLYGQIFCDFGNSFEVVDTDGENPLSSMIASITKEEKS---------VVTCLDESRHGFQDGDYVTFSEVQ---GMTELNGCKPIKIEVLGPFTFSI-------GDTRNYSDYRRGGIVTQVKMPKKVAFKPLKESLKEPEF----IVTDFGK 289
[Close]
BLAST of mRNA_Ecto-sp6_S_contig10.609.1 vs. uniprot
Match: A0A1W0ABW4_9STRA (E1 ubiquitin-activating enzyme (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABW4_9STRA)

HSP 1 Score: 195 bits (495), Expect = 7.100e-53
Identity = 122/304 (40.13%), Postives = 172/304 (56.58%), Query Frame = 3 
Query:  375 IDEDLYSRQLYVMGKTAMAKMGKADVLISGMSGLGAEVAKNVVLAGVRSVTLHDDRPATLEDLSSQFCLGPEAAERGEGRARASVDHLRELNPYVDVRLVEGPLTEEAIEAGGYAAVLLVDETVGFQLRANEACRRAGTAFVSASSRGAFASLFCDFGDSFVVQDTDGEEALACLVGAIVREEEGEAGVGGGRWVVEAVDGERHDFQTGDTIRFEDLRDAE-----GALLDTPTQEFTVKNINPRKFSMEAGGWAAGETQRRACGGRAVQVKKPSKVSFLPLRKAL-RPGQVAKLTLPTDFGKL 1268
            IDE LYSRQLYVMG  A  +MG+++VL+  + GLG E+AKN+VLAGV+SVT+ DD PA+  DLSSQF L  +  +    RA ASV  L ELNPYV V +  GP+ E  IE   Y  V+L + +  +  R NE C +   AF++  SRG F S+FCDFGD F+V D DGE+ + C+V ++++  E        + VV   D  RH  +TGD + F +++  +      A+  T T  +T    NP K +  +GG+           G   QVK+P  + F  +  A  +PG+     L +DF K+
Sbjct:    4 IDEGLYSRQLYVMGHEAQRRMGESNVLLINVDGLGIEIAKNIVLAGVKSVTIADDTPASYMDLSSQFYLSEDDVKNQTSRADASVRKLAELNPYVPVHVHTGPVVETIIEQ--YRVVVLSNGSRSYAKRINEICHKRNIAFIATESRGVFGSVFCDFGDEFIVSDKDGEQPITCMVSSVMQSAEAPT-----KLVVTVTDDNRHQLETGDYVTFREIQGLDYLNGCEAVPITVTGPYTFTIDNP-KGNSASGGF-----------GYVTQVKQPLTLRFSTMDVATEQPGEF----LISDFAKI 284
[Close]
BLAST of mRNA_Ecto-sp6_S_contig10.609.1 vs. uniprot
Match: A0A8I6RC71_CIMLE (E1 ubiquitin-activating enzyme n=1 Tax=Cimex lectularius TaxID=79782 RepID=A0A8I6RC71_CIMLE)

HSP 1 Score: 201 bits (512), Expect = 2.010e-52
Identity = 125/297 (42.09%), Postives = 168/297 (56.57%), Query Frame = 3 
Query:  375 IDEDLYSRQLYVMGKTAMAKMGKADVLISGMSGLGAEVAKNVVLAGVRSVTLHDDRPATLEDLSSQFCLGPEAAERGEGRARASVDHLRELNPYVDVRLVEGPLTEEAIEAGGYAAVLLVDETVGFQLRANEACRRAGTAFVSASSRGAFASLFCDFGDSFVVQDTDGEEALACLVGAIVREEEGEAGVGGGRWVVEAVDGERHDFQTGDTIRFEDLRDAEGALLDTPTQEFTVKNINPRKFSMEAGGWAAGETQRRACGGRAVQVKKPSKVSFLPLRKALRPGQVAKLTLPTDFGK 1265
            IDE LYSRQLYV+G  AM +M  +DVLISG+ GLG EVAKNV+L GV+SVTLHDD+  TL DLSSQF L    A+ G+ RA AS   L ELN YV  R   GPLTE+ +   G+  ++L D     + R  E  R +G A V+A+SRG FA +FCDFG  F V DT+GE  ++ ++  I R+ EG         VV  +D  RH  + GD + F +++   G       +   +K + P  FS+        +      GG   QVK P KV F P++++++  +       TDFGK
Sbjct:   50 IDEGLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEVAKNVILGGVKSVTLHDDKKCTLADLSSQFYLTE--ADVGKNRAEASCRQLAELNNYVPTRAYTGPLTEDFLR--GFRVLVLADVDKDVKERTAELARTSGVALVAATSRGVFAQVFCDFGPEFTVLDTNGENPVSAMIANISRDAEG---------VVACLDDSRHGLEDGDYVTFHEVQ---GMKELNECEPMKIKVLGPYTFSIGC----TTDFSEYLRGGIVQQVKMPKKVVFKPMKESVKSPEFVM----TDFGK 322
[Close]
BLAST of mRNA_Ecto-sp6_S_contig10.609.1 vs. uniprot
Match: A0A485LB94_9STRA (E1 ubiquitin-activating enzyme n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LB94_9STRA)

HSP 1 Score: 201 bits (510), Expect = 3.320e-52
Identity = 127/301 (42.19%), Postives = 173/301 (57.48%), Query Frame = 3 
Query:  366 AGGIDEDLYSRQLYVMGKTAMAKMGKADVLISGMSGLGAEVAKNVVLAGVRSVTLHDDRPATLEDLSSQFCLGPEAAERGEGRARASVDHLRELNPYVDVRLVEGPLTEEAIEAGGYAAVLLVDETVGFQLRANEACRRAGTAFVSASSRGAFASLFCDFGDSFVVQDTDGEEALACLVGAIVREEEGEAGVGGGRWVVEAVDGERHDFQTGDTIRFEDLRDAEGALLDTPTQEFTVKNINPRKFSMEAGGWAAGETQRRACGGRAVQVKKPSKVSFLPLRKAL-RPGQVAKLTLPTDFGK 1265
            AG IDE LYSRQLYVMG  A  +MG+++VLI  + GLG E+AKN+VLAGVRSVTL DD P+T  DLS+QF +  +  +   GRA AS+  L ELNPYV V    G LT E I   G+  V++ + T    L  N+ C     +FV   SRG F S+FCDFG++FVV D DGE+ + C+V +I   +E       G+ +V   D  RH  +TGD + F +++  E AL    +   TV    P  F+++  G         + GG   QVK+P  + F PL+++L  PG+     L +DF K
Sbjct:   12 AGKIDEGLYSRQLYVMGHEAQRRMGESNVLIVNLDGLGVEIAKNIVLAGVRSVTLFDDAPSTFMDLSAQFYITEKDVKDQVGRADASLRKLAELNPYVPVTTHTGKLTPEFI--AGFRVVVVCNATRAAALEINKMCHDQDVSFVMTESRGLFGSVFCDFGEAFVVSDKDGEQPITCMVASITPTDEA------GKLLVTVTDDARHQLETGDHVTFREIQGIE-ALNGCKSLPITV--TGPFTFTIDHAG-------THSMGGYVTQVKQPKTLRFKPLQESLLSPGEF----LVSDFAK 290
[Close]
BLAST of mRNA_Ecto-sp6_S_contig10.609.1 vs. uniprot
Match: A0A662X664_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X664_9STRA)

HSP 1 Score: 197 bits (502), Expect = 3.330e-52
Identity = 130/306 (42.48%), Postives = 170/306 (55.56%), Query Frame = 3 
Query:  363 GAGGIDEDLYSRQLYVMGKTAMAKMGKADVLISGMSGLGAEVAKNVVLAGVRSVTLHDDRPATLEDLSSQFCLGPEAAERGEGRARASVDHLRELNPYVDVRLVEGPLTEEAIEAGGYAAVLLVDETVGFQLRANEACRRAGTAFVSASSRGAFASLFCDFGDSFVVQDTDGEEALACLVGAIVREEEGEAGVGGGRWVVEAVDGERHDFQTGDTIRFEDLRDAEGALLDTPTQEFTVKNINPRKFSMEAGGWAAGETQRR---ACGGRAVQVKKPSKVSFLPLRKALR-PGQVAKLTLPTDFGKL 1268
            GA  IDE LYSRQLYVMG+ A  +MG A+VLI G++GLG E+AKNV+LAGV+SVTLHDD PA+  DL+SQF L    A+ G+ RA  SV  L ELNPYV VR   G +TEE +   G+  V+LV+  +    R N  C     AF+S  +RG F S+FCDFGD F+V D DG E ++C++ +I               +V   D  RH  +TGD + F   R+  G      +Q   V    P  F+++    A  E   +   + GG   QVK+P  V F  L  AL  PG+     L  DF K+
Sbjct:   66 GAANIDESLYSRQLYVMGREAQLRMGAANVLIVGLNGLGVEIAKNVILAGVKSVTLHDDTPASALDLASQFYLTE--ADIGKPRAAVSVKKLAELNPYVPVRCHSGGITEEFLL--GFRTVVLVNAPLKEAKRINSICHAKSIAFISTEARGVFGSVFCDFGDEFLVSDRDGVEPVSCMISSISNSSPP---------LVTVSDDTRHGLETGDVVSF---REVTGFPFLNSSQPRKVTVTGPFTFTLDIISEADKELFEQGSPSSGGYVTQVKQPLVVKFKSLESALAAPGEF----LVNDFAKI 351
[Close]
BLAST of mRNA_Ecto-sp6_S_contig10.609.1 vs. uniprot
Match: F2UHA7_SALR5 (E1 ubiquitin-activating enzyme n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UHA7_SALR5)

HSP 1 Score: 200 bits (509), Expect = 4.620e-52
Identity = 131/302 (43.38%), Postives = 182/302 (60.26%), Query Frame = 3 
Query:  369 GGIDEDLYSRQLYVMGKTAMAKMGKADVLISGMSGLGAEVAKNVVLAGVRSVTLHDDRPATLEDLSSQFCLGPEAAERGEGRARASVDHLRELNPYVDVRLVEGPLTEEAIEAGGYAAVLLVDETVGFQLRANEACRRAGTAFVSASSRGAFASLFCDFGDSFVVQDTDGEEALACLVGAIVREEEGEAGVGGGRWVVEAVDGERHDFQTGDTIRFEDLRDAEGALLDTPTQEFTVKNINPRKFSMEAGGWAAGETQRRA---CGGRAVQVKKPSKVSFLPLRKALRPGQVAKLTLPTDFGK 1265
            G IDE LYSRQLYV+G  AM KM  A VLISGM+G+G E+AKNVVL GV+SVT+HD+ P +L DLSSQF L    A+ G+ RA  + D L ELNPYV V+++ G LTEEAI+   ++ ++L   T+  QLR + A R +  A V A +RG F  +FCDFG SFVV D +GEE  + ++ +I R+++G         +V   D  RH F+ GD + F +++     L D   ++ TVK   P  FS+       G+T   +    GG A QVK+P+ V+F  L ++L+  +     L +DF K
Sbjct:   12 GEIDEGLYSRQLYVLGHEAMRKMQAAHVLISGMNGVGVEIAKNVVLGGVKSVTIHDENPVSLRDLSSQFFL--READVGKNRAAVTADRLGELNPYVPVKVLTGELTEEAIKP--FSVIVLTASTLDEQLRIDAAARASKKAVVVAETRGLFGQVFCDFGPSFVVTDANGEEPASVMLASISRDKDG---------IVTCHDEGRHGFEDGDYVVFSEVQGMT-ELNDGKPRKITVKG--PFTFSI-------GDTTNMSEYVRGGVATQVKQPTTVTFSSLEESLKNPEF----LLSDFAK 286
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.609.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVL3_ECTSI9.320e-27597.52ThiF domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835Z5W8_9STRA4.580e-7451.29UBA_e1_C domain-containing protein n=1 Tax=Tribone... [more]
A0A6H5J7N3_9PHAE9.380e-5743.18E1 ubiquitin-activating enzyme n=2 Tax=Ectocarpus ... [more]
A0A024TML4_9STRA8.270e-5441.86E1 ubiquitin-activating enzyme n=2 Tax=Aphanomyces... [more]
A0A444TB13_ARMVU5.390e-5340.97E1 ubiquitin-activating enzyme n=1 Tax=Armadillidi... [more]
A0A1W0ABW4_9STRA7.100e-5340.13E1 ubiquitin-activating enzyme (Fragment) n=1 Tax=... [more]
A0A8I6RC71_CIMLE2.010e-5242.09E1 ubiquitin-activating enzyme n=1 Tax=Cimex lectu... [more]
A0A485LB94_9STRA3.320e-5242.19E1 ubiquitin-activating enzyme n=1 Tax=Aphanomyces... [more]
A0A662X664_9STRA3.330e-5242.48Uncharacterized protein (Fragment) n=2 Tax=Nothoph... [more]
F2UHA7_SALR54.620e-5243.38E1 ubiquitin-activating enzyme n=1 Tax=Salpingoeca... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:1964688..1973059 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score773.9
Seed ortholog evalue4.6e-221
Seed eggNOG ortholog2880.D7FVL3
Model size1514
KEGG koko:K03178
KEGG Pathwayko04120,ko05012,map04120,map05012
Hectar predicted targeting categorysignal peptide
Exons9
EggNOG free text desc.ubiquitin activating enzyme activity
EggNOG OGsCOG0476@1,KOG2012@2759
Ec32 ortholog descriptionNAD(P)-binding domain
Ec32 orthologEc-15_003730.1
EC6.2.1.45
Cds size1482
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04121,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.609.1prot_Ecto-sp6_S_contig10.609.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig10 1964720..1973059 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348712.8268611-UTR-Ecto-sp6_S_contig10:1964687..19647191682348712.8268611-UTR-Ecto-sp6_S_contig10:1964687..1964719Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig10 1964688..1964719 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348712.842314-CDS-Ecto-sp6_S_contig10:1964719..19651561682348712.842314-CDS-Ecto-sp6_S_contig10:1964719..1965156Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1964720..1965156 +
1682348712.8595042-CDS-Ecto-sp6_S_contig10:1966591..19667991682348712.8595042-CDS-Ecto-sp6_S_contig10:1966591..1966799Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1966592..1966799 +
1682348712.8684554-CDS-Ecto-sp6_S_contig10:1967308..19675211682348712.8684554-CDS-Ecto-sp6_S_contig10:1967308..1967521Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1967309..1967521 +
1682348712.8774614-CDS-Ecto-sp6_S_contig10:1968089..19682111682348712.8774614-CDS-Ecto-sp6_S_contig10:1968089..1968211Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1968090..1968211 +
1682348712.885785-CDS-Ecto-sp6_S_contig10:1968788..19688551682348712.885785-CDS-Ecto-sp6_S_contig10:1968788..1968855Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1968789..1968855 +
1682348712.894998-CDS-Ecto-sp6_S_contig10:1969592..19696821682348712.894998-CDS-Ecto-sp6_S_contig10:1969592..1969682Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1969593..1969682 +
1682348712.9036374-CDS-Ecto-sp6_S_contig10:1970873..19709721682348712.9036374-CDS-Ecto-sp6_S_contig10:1970873..1970972Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1970874..1970972 +
1682348712.9137583-CDS-Ecto-sp6_S_contig10:1972289..19723701682348712.9137583-CDS-Ecto-sp6_S_contig10:1972289..1972370Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1972290..1972370 +
1682348712.9216487-CDS-Ecto-sp6_S_contig10:1972894..19730591682348712.9216487-CDS-Ecto-sp6_S_contig10:1972894..1973059Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1972895..1973059 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig10.609.1

>prot_Ecto-sp6_S_contig10.609.1 ID=prot_Ecto-sp6_S_contig10.609.1|Name=mRNA_Ecto-sp6_S_contig10.609.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=494bp
MRRLLLVAALQSSTANAAAVWAAHGLSPAVAASRKPPGSVNAAAVTGHLV
RPTSTEEPTAGLSLPTRACRGLRGGCSGPASSAAGVTNDGMEGELVRESS
SSSDNEAAGDGAGGIDEDLYSRQLYVMGKTAMAKMGKADVLISGMSGLGA
EVAKNVVLAGVRSVTLHDDRPATLEDLSSQFCLGPEAAERGEGRARASVD
HLRELNPYVDVRLVEGPLTEEAIEAGGYAAVLLVDETVGFQLRANEACRR
AGTAFVSASSRGAFASLFCDFGDSFVVQDTDGEEALACLVGAIVREEEGE
AGVGGGRWVVEAVDGERHDFQTGDTIRFEDLRDAEGALLDTPTQEFTVKN
INPRKFSMEAGGWAAGETQRRACGGRAVQVKKPSKVSFLPLRKALRPGQV
AKLTLPTDFGKLVLQPVHADPPVFVLRLHGGVAVTLALVEGVRRKGGPLR
RPAGGPRRRPPAETVLQIDLRGRCRCHRVRASQEPGAYGSGLR*
back to top

mRNA from alignment at Ecto-sp6_S_contig10:1964688..1973059+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig10.609.1 ID=mRNA_Ecto-sp6_S_contig10.609.1|Name=mRNA_Ecto-sp6_S_contig10.609.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=8372bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:1964688..1973059+ (Ectocarpus species6 EcLAC_371)
CCGCAGAACCCACGCTGCTGTGTAGAGCACACATGAGGCGTTTGTTACTG
GTGGCTGCTTTGCAAAGCAGCACAGCCAATGCCGCGGCCGTGTGGGCGGC
GCACGGCCTGAGTCCCGCAGTAGCAGCAAGTCGAAAACCACCAGGGTCTG
TGAACGCTGCTGCTGTCACTGGGCATCTCGTGCGGCCAACGTCAACCGAA
GAGCCAACAGCAGGCTTGTCCCTGCCAACACGCGCTTGCCGTGGGCTCCG
AGGTGGATGCAGTGGTCCCGCCAGTAGTGCCGCTGGTGTAACGAACGATG
GGATGGAAGGGGAGCTGGTTCGAGAGAGTAGCAGCAGCAGCGATAACGAA
GCGGCTGGAGATGGAGCCGGCGGGATAGACGAGGACTTGTACTCGCGGCA
GCTGTACGTGATGGGCAAGACGGCCATGGCCAAGATGGGCAAAGCTGATG
TGCTCATATCGGGCATGAGGTATGTTGTGTGCAATCTGATCAGTACAACA
ACAAAGGGAGAGACTGTGGCCGTTCGGCCATCCGGGTTTGCTCATGTATC
CAGCCAGGGTTGTTGAACCTCCCCCCCTTCCCTCTCCTAAACGTAGTATG
TACGTTGTGTCTAGCAGGCAAAGAACAGCAGTAGCAGCAGTACCACCATG
TCCACCAGAGAGATCTTGCCAACACCAGCACTGCTGTTGACGCACGGAGC
CATCTGGGCAGTAAGTAGCATGACGACACCTTTCAGTAGCAGCAACTGGT
GTACTGTAGCAACCCATTCGAACGCTGTCGGGAGATTCAGTGCCGCCGGC
CCGCTCGTACAATGTATAGCACCTGTATGTTCCTGCTGTGTAACTTTGAA
AATGGCTCACGATGTCTCAACGGTTGAGCACAGGCTATGGCCATAGATGC
TGTTACCCTTCAGGATTTGTGTGGTGCCACCGGCTGAACCCGATATCTCA
CGCCGGAGTTGTTAATGTTTTAACAATTCGGGCCTCATTTCTTGTGGCGA
TGGTGCTCATGTAGCTGGCCGGGACGTTACACATTTAAGGGGAAGCCATC
CACGTGTTCGATCTTTGTGCGCGCTTGTCGCCAAAGCTCGCAGATTTCGT
CTAACAGAGCCACAAGAACCTCAGTATCTTCGAGCGATGAGCTGAAAAAT
CTCGCAGACCCGTAGAACCGTAGAAGCCCCAAGGTTGCCAGCCTGAACAG
ACGTTTCGGCGGCAGTGTACTCTTGCGTAGAACAGCAGCTACGCAGTCTA
CAGTACTACTGAACAGCAGTATACTCAGGCCCAACCAAAATCGTTCACCA
GCACACGTGTACGAAGAGAAATGAGACGTGTGAAGATCAGCACATCCCAC
TTCCAGAGCTTGCAGGCTCCCATGGAGAAACTCTGCCGCAGCACACCCCT
GGTCGTCTCATGTTTTCTTCTGCGCTTTTCCACCCTTGCCAACCCCTTCG
CCGCCACACACACGACACACCCTGCGAATGACATGTTGGATGTTGCTCGG
TGTAGCACATACCGGCTCCACCGATCTCGACAATGTGTCCAAAGAACAAT
CTACCAGCAGGCAGAGTTGTGTTGGGGCTCGCTTATCATTCCTCTATTAC
TTCGACGTACTCGCGTATGATGAAAACCTAACAATCAGTTCGGCCGCCGT
CGCGGAACGTCGAGCAAGGGTTAGACTATATCATCTGCAAGCAATGCAAG
CAGTCAGTCCTGTTGCAACACCCCCCCTCGTGCTACAAACACACGAACAG
CGGCACGGCACTCGCTAAAACAAAACGGCGTCGGCTCTACACAGTCACCC
CGCCGCCTGCGAAGAACCAAGGCAGGATTCCCCCGACAGGGCATAGAAAA
ACAAAAACCCCTCGCGCCCTTCCTTTCCTGCCCCTCCCTATTTTCCCATA
AAAGCGGGCTTGGTGCTGAGGTGGCCAAGAACGTTGTCCTTGCCGGGGTG
AGGTCGGTCACGCTTCACGACGACCGACCGGCGACGCTGGAAGACCTGTC
GTCACAGTTCTGTCTGGGGCCGGAGGCAGCGGAGAGGGGAGAAGGCAGGG
CGAGGGCGAGCGTGGACCACCTCAGGGAGCTCAACCCCTACGTTGACGTC
CGGCTAGTGGAGGTGGGGAGGAGAGGAGCAACGAGGGCGGCGGAGGGGGG
TGTTTAGCTGTGGCAGCAGCGGCGGCAATAGTGCACAGTTGCAAACCTAC
TGTAGCCAGCACCAGCCTTGATTGTCGCCTAGAATGCCTCTCAGGGGAAA
ACCAGATGGACACTTTGTCCGCCGGGGACACGGGCAGGGGGTCTGCCCAT
GGGAACCAACTAAGGAACCAACTACAATAGATGTATGTGTTTTGTGCTTA
GCACCAGCGTGCATCACTATTTAGGGCTTCAGTGTATAGGTTTAGGTTGC
CTCGAAATATGCCCCAGGTGTCCAGCCGGTTTTGCTCGCAGTCACTGTTA
AGACTTCAACCCACGCCCTTGGACTGCTGTGGTTGTACCTCCAACGGGTA
GTCTTTCTGCACGTTCTTTCAAACAATGCGAGGATGTCCGCGTCAACAGC
ACTGCCAACGTTCTGCGCTTCTCCCTCACGTGGCCACATGCCTTCTTTCC
TGTGCACCCGCCCCTCAAAAGGGTCCACTAACCGAGGAGGCGATCGAGGC
GGGGGGTTACGCGGCTGTGCTGCTAGTAGACGAGACTGTGGGTTTCCAGC
TGCGGGCGAACGAGGCGTGTCGGAGGGCGGGGACGGCCTTCGTTTCGGCG
TCCTCGCGGGGAGCGTTCGCGTCCCTGTTCTGCGACTTCGGGGACAGCTT
CGTCGTGCAGGACACAGACGGCGAGGAGGCCCTGGTAAGGTTAGCACCTC
CATTCGGAACACCTTGTATAGGGATTGCGGGACATTCCGTAGGGGGTGTA
CCATGAAACGGACAGAGAGACTACAGATCTTGGTGGATCCCTTGGCGAAG
ATGTGTGGTAGTGGTGAAAGTCTCGATACAGATCATCAGGATCCTGGCTG
CCCATGAACACCAGGAGGGCAATGAGGAAACCAAACACGAGCAGACCTGA
TGGTAGCTGGTCTCCGCCAGCACATAGTTGGCTGCCTTTGGTGTTGTACG
CCCTTGGTCGCTCTCGCTTGGACTCTAAATCGGGTCTGTCGCGCAGCCGT
CTGCAACGATTCCCCTTCCGGCACAAGCGGTTGTCGCCTGATTCCCCTCA
CTGCGGTATGCAAGCTGCCCCAGCTGATTGACTCCCGACTCCCCTCACCA
TCGTTCAATCGGTCTACATTTTTGCGGCCGTTTCTGCACCTGTAGTCTTC
GCGTAGCCTCCCTCCGGCCTCGACCGCTACCCAACCCTTACCCTCTCTAC
CCCCCACCGTAATGTTGTTGTCGTGCCCCCCCCTGGTCTCACTCCGGTGA
AGGCGTGTCTAGTGGGTGCTATCGTGAGAGAGGAGGAGGGAGAGGCGGGA
GTGGGAGGGGGGCGGTGGGTCGTGGAAGCGGTGGACGGCGAAAGGCACGA
CTTCCAAACAGGGGACACGATCAGGTCGGTTTTCAACCCCCTCGCGTCCT
TTCCCGCCCCGCACTCGGCCTTGTTTTCAGAGGTTTGGCATGTTCGGGAG
GGGAAGGGGGGCAGATTTCCAAGCCAGGGACCACGATAAGGGTGATCTGT
GTAATGCTGTCGTGTGGTTTTGGAGGGGCGAATCAATGTTGCCTAGCTTC
TACCTGAAGGGAGTGTTAAGACTCTATTGCGAAATGGAGCAGGAGAACAA
ACTAATAACCTGTCCGATTTGGGGTCATTGGGGTCTAATTGGTACTTCGT
ATCCTTCGGTGTCGTTTCGCGTTTTGGATCTGTTCTCATTGCGGTAAGTT
GTCTGCGTCGCTGCCGATGATGCTCCAGCTGTGGTTGTGCCAATTGTCTC
GTCATGTTTTCCCTTACTTCGACGTCGGGGCAGCGCGTCCCTCAGGAAAA
TCTAATTGTGCTTCACTCCGATGCAGGGCAATGCTTGCCCAACGACCTCG
TGTCTCTCAAGACCACTATAGGCCACGAACAACAACTGCCTACAGAGTAG
TACAAAACGTTTCCTCCCGTTCACGATCGATCCCTGGAACGGTGCCCACA
GGTTCGAAGACCTACGCGATGCGGAGGGAGCCCTCTTGGATACACCTACG
CAAGAATTTACCGTCAAGGTTAGTTTGTCGGTGCCGTGTCTGGGCGGGAC
GGACCCTACCCGGTGCATTGGCGTTGCAAGAGGTCATACGTTGGCGGGCG
TTTTGCCGTGTGTTGTTCTGCGAATGCGTTTGAGGCCCTGTTCGTGGGCT
ATGATGAGGTGTCTGTTACTTTGGAGGTCCTTTGGGCAGTCGCGGTGCTC
CGGGCCACAACCGAAAACGTATACATTGTAGAGGGCACCGAGAATACCTT
CGTCGCCTATGGGTGGCTCTTGTCCCCTCATGCGCGGGGGGGTTTGCTTC
GTGCATCGCGCTCCGAGGTGGTGTACGTGGTTGTGTTGGGTACTGGCTCA
ACAAAATGCGGATGGGGTGTGTTTGGTACGCAAGCATGTGCGCGTGGCGT
TTTGTCTTCCTGTTCGTCGATCCTTTGTCTGTGCACGTCATGTTTTTTTT
GTTTGGCCATGTTTGATCGTCTGTGGGATTTCGACGACGAAGCACTTTTT
CTTCTTCCGTTGGGTGCTTACAAAACGGAGGTGTTGGGGTCGCTCTCATA
TTGAACGTGCCTAACCCACTTGTGTGCTGCTGTCTCTTTTCGTTCTCCCA
ACGTTAACCTTGAACTCGCGTACCGGATGTTTTCGGTCGCTCTCAACGAT
TACATGCCTGATCCGTGGTGCGCTGCTGCTTCTTTTCCCTGGACCCTTAT
TCTTGCACTTTTGGCCATGTACCCTCTCCTCCTCCGACGGCGGCACACGC
GACAGAACATCAACCCTCGAAAGTTTTCCATGGAGGCAGGCGGTTGGGCG
GCAGGGGAGACGCAGAGGAGGGCCTGCGGGGGACGAGCGGTTCAGGTACG
AGGCAGTTGTTGGTGTGGGAAGAGCATGGGAGTTACTATAGATGCCTGTA
ATGGTTTGGGCTGGGGAACATGGCAGTTAAGATTGATTTCTGAAGAGGTT
TGCGCTGTCGTGGGAAAACGGAACCCGGGGAGTTGGTATTTACCTGGGAG
GCTTTTTTTATTGTGATAGGGGATCGTCCCCTGGTATCCCTTGGGTAATA
CAACTTGGTTTCCGAGAAGGGTAGAACAGGACCTTTTCCGTTCCGTTGTA
CCTTCCAGACCTCTTGAGAATATGAGATTAAGCTGCCGTCGAGCTTGCTT
CTGAAAGGATAGGATGCCCGTGTGAGGGAGAGCAACTTCCGCGACCCCCT
TCGGTTCTTGCTCCTCGTCGTCGCGTTCGGCGAATTTTTTTGCGGTTGGC
CGGTATTAGAGTGTCGCTCTTCATTGGCAGCGTCCACATGGATGGAAGTG
TTTGGTGCTTACTGGCGAGATGCTGGCGACACGATATGTCAAACTTCAGA
GAGACCAGGAGTATAAGATTCTCAAAACAGCTTGCGAGTTTGTGTAAATA
GGAAACCCGTGTGAGATTGTCTCATGCTTGGTGGTCGGTTCCTTTGGTGT
GAAGGTCCTCCAACCTTGAAGGTAGGCATGAATGAAGAAGAAGGGTGAAG
GGGTTCTTCGGTTTTGCTCCACGGCCTTGAAGGGCACAGTCAAGCCGTCT
GTTACAGTTCCGTATTCCTGGTTGGACGATGAATTTTGAGCCAATGTAAA
TCCTTCGGAGGCCCGTCTCTCAATATCACGCGCCGTTAGTTGCTGCCATT
TGTGTATACCCATTTGCTGGCGTCTTGTTGTTATTGTTGTTGCTGTTGCT
GTCATTGTTGGTACAGTTGCTGTTGTTGTCTATGCTGCTGAGGTTGTTGT
TGTGGTCGATGCTGATACGGTTGCTGTTGTTGTCAATTTTGTCATGGCTG
CTGTTGTTTTTGTTGCTGGTCCCGTTCTAGTTGTTCGCCCCATTATAGCT
CGTGGCCTTTCTCAACCCCAGCCCGTTGTCACGGCAAACACCCACCCACC
CACCCACCCACCCACCACCACCGTGCCGGCAGGCAGAACAACAAAAATAG
AACAGATATCCATTTCTTGTCAGTTAACATCAAATGGACCCTATCTTTTT
TCGTTTCTATTGCGTGTTTTGTTTTGGTTATGTCAGGTGAAAAAGCCGTC
CAAGGTCTCGTTCCTTCCTCTCCGGAAGGCGTTACGGCCAGGGCAGGTCG
CGAAGCTCACTCTACCCACGGACTTTGGCAAGCTGGTGAGTTGAGTAACT
GAATGGGGTCGCTAAGAAGAGGGAAAGGTGGAGGACGGCGTGCAGGCAGC
GTAGGACGAAAGAGTGTGTTCGACGGCCAGGAAATATTTTTTTAAATACC
TTTCGCTTCATGTCAGAAATCACCTATCCATTCGACGCGATTGTTAGAGG
AGGGGGTCTTACAATCAGGGCAGAGTGTCACCCGCTGGGTAGCAGGCTTG
ATTGACTCTGGTTACTGTCTACGTGGTCTGCTGTTACTGCTTTTGTCGGT
GTTGGTGTTGGTTGTCTCTGCTGTTCGTGTTGGAATCTGCCCTACCCTAG
TTTCGGTAGCATCTCCCATTCCGTGCGGTCTTCAAGAGACGCGCTCCTCT
CTCCGTCCGCACAGCAACCAAAACTAAGACACCCCCTGGTCACACCCCAC
AGGAACCCTCCCGGCAAATGACGGTCCACGCGTGCTTCTTGTGCCTGGAC
GACTTCCGCCGCGATCACGGTGGCCGATACCCGACCCCGGGCAGCGCCAA
GGACGCGAAAGCCTTCCTGGCTCTCGTCAAAGCCTCGCCCTTCTTTCCTT
CTATTTCCTGTTCTTCTTCTTCTTCTTCTTCCTCCGGATCGAAAGAAGGA
GATGGGCTTGTCGTGGACGAGGCCGTCGTGATGGCGTTCTCGAGGACGTG
CGCCGGGGGGCTGAGCCCCGTGGCCGGGTTCTACGGCGGGGTTGTCGCGC
AGGAGGTTCTCAAGGGGTGAGCGGCAGGGGTGATTTTCGGCGGCGGTAGC
GCCTGTGGCGTCTCGGCTGTGGGTTTGTTACTTTCCCTTCTGTTGGCTGT
CTTGGGACCGTCGTTGCCGGAAAGTTGCGTCTTCGCAGCAGGGCAGCTAT
CATCACCCGAGTGTATATGTGTTGTGTGTTTTGGCGCGCGGGGGGGGCGG
GGGGTTGGTTGACCAGAGCAACGGGAATGAGGATGGGCATGTTCAAAACC
CAGAGCACGCGCGAAAACTAAGTTTCTCGCAATTTCTACGTCGCGTGCAT
GTGTTGGCCTCCTTGTTGCTTGCGCTGGTGTCCGCTTGCTTTGCTGGCAT
GCCGTTCTACCTTGCCTTGCTTCCTTCCTCGCCCCGTGTGCCTGACGCGG
TACTCTCTCGCGCCGTGCCTGCCCCCCCGCGCTTGCATTGTTGCCTCCCC
CCCTCCCCCTCGTGTCTCTCTCTGTTTCTCTGTCTCGCTCGCCGTTTCTC
TCCCTCTCTGTCCCTCTCTCTGTCCCTCTCTCTGTCCCTCTCCCTCTCTC
TCCCCCACCCCCTCAACCAATAACCTTGTCATTCGATTCAATCCTCCATC
AGGTGCTCCAGCCTGTTCATGCCGACCCGCCAGTTTTTGTACTACGACTG
CATGGAGGCGTTGCCGTCACCCTTGCCCTCGTTGTGAGTGCGCGAAGAAA
AATCCCCAGCGTTCAGCTTGGAGCCTTGCTCTCTATGTTGCCTCCCTCGT
TGTTGGTTAGTGTCGCACAAACGCGGCTTATCGCGTGTAGTTTGGCGTAG
ATGCCTCGGTGCAACCTGATGGTTGTTACCGTAGGGGGCGTGACGGTTGT
TGCCGAAGATGGCATGACACAAGATATCACACCCCCCGGACCGATTTTCA
CAGCTCGATTTATCAACAGTAGAAAGAGTAGCGGTGCGAAAAAATGACGG
CATTGAAACCATCTCGTTCGAGGTCTTTCCGAATACGTTTCGTTTGATTT
TGGCATCCTTTTCTTCGTGGGGTATACTGAAGAGCTTTGAAAATCGGCCA
GGGGATGTGGTATCTTGTGTCACCAGCCGTTGCTCCTGATTGTTTACACG
GGTGTGTCGGCCGACGAGGGCTATGTATATCTATGCGTGTACGTTCACGG
GCTAACTGCTGTGTCGCGCCATGTGTGTTGCTCATGTTTGCTGTTGCTGG
AGAGCAGGAAGGCGTGCGCCGCAAGGGGGGACCGCTACGACGGCCAGCGG
GCGGTCCTAGGCGACGCCCTCCAGCGGAGACTGTTCTCCAGATCGATCTT
CGTGGTCGGTGCCGGTGCCATCGGGTGCGAGCTTCTCAAGAGCCTGGCGC
TTATGGGAGTGGGCTGCGGTAG
back to top

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig10:1964688..1973059+

>mRNA_Ecto-sp6_S_contig10.609.1 ID=mRNA_Ecto-sp6_S_contig10.609.1|Name=mRNA_Ecto-sp6_S_contig10.609.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1482bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:1964688..1973059+ (Ectocarpus species6 EcLAC_371)
ATGAGGCGTTTGTTACTGGTGGCTGCTTTGCAAAGCAGCACAGCCAATGC
CGCGGCCGTGTGGGCGGCGCACGGCCTGAGTCCCGCAGTAGCAGCAAGTC
GAAAACCACCAGGGTCTGTGAACGCTGCTGCTGTCACTGGGCATCTCGTG
CGGCCAACGTCAACCGAAGAGCCAACAGCAGGCTTGTCCCTGCCAACACG
CGCTTGCCGTGGGCTCCGAGGTGGATGCAGTGGTCCCGCCAGTAGTGCCG
CTGGTGTAACGAACGATGGGATGGAAGGGGAGCTGGTTCGAGAGAGTAGC
AGCAGCAGCGATAACGAAGCGGCTGGAGATGGAGCCGGCGGGATAGACGA
GGACTTGTACTCGCGGCAGCTGTACGTGATGGGCAAGACGGCCATGGCCA
AGATGGGCAAAGCTGATGTGCTCATATCGGGCATGAGCGGGCTTGGTGCT
GAGGTGGCCAAGAACGTTGTCCTTGCCGGGGTGAGGTCGGTCACGCTTCA
CGACGACCGACCGGCGACGCTGGAAGACCTGTCGTCACAGTTCTGTCTGG
GGCCGGAGGCAGCGGAGAGGGGAGAAGGCAGGGCGAGGGCGAGCGTGGAC
CACCTCAGGGAGCTCAACCCCTACGTTGACGTCCGGCTAGTGGAGGGTCC
ACTAACCGAGGAGGCGATCGAGGCGGGGGGTTACGCGGCTGTGCTGCTAG
TAGACGAGACTGTGGGTTTCCAGCTGCGGGCGAACGAGGCGTGTCGGAGG
GCGGGGACGGCCTTCGTTTCGGCGTCCTCGCGGGGAGCGTTCGCGTCCCT
GTTCTGCGACTTCGGGGACAGCTTCGTCGTGCAGGACACAGACGGCGAGG
AGGCCCTGGCGTGTCTAGTGGGTGCTATCGTGAGAGAGGAGGAGGGAGAG
GCGGGAGTGGGAGGGGGGCGGTGGGTCGTGGAAGCGGTGGACGGCGAAAG
GCACGACTTCCAAACAGGGGACACGATCAGGTTCGAAGACCTACGCGATG
CGGAGGGAGCCCTCTTGGATACACCTACGCAAGAATTTACCGTCAAGAAC
ATCAACCCTCGAAAGTTTTCCATGGAGGCAGGCGGTTGGGCGGCAGGGGA
GACGCAGAGGAGGGCCTGCGGGGGACGAGCGGTTCAGGTGAAAAAGCCGT
CCAAGGTCTCGTTCCTTCCTCTCCGGAAGGCGTTACGGCCAGGGCAGGTC
GCGAAGCTCACTCTACCCACGGACTTTGGCAAGCTGGTGCTCCAGCCTGT
TCATGCCGACCCGCCAGTTTTTGTACTACGACTGCATGGAGGCGTTGCCG
TCACCCTTGCCCTCGTTGAAGGCGTGCGCCGCAAGGGGGGACCGCTACGA
CGGCCAGCGGGCGGTCCTAGGCGACGCCCTCCAGCGGAGACTGTTCTCCA
GATCGATCTTCGTGGTCGGTGCCGGTGCCATCGGGTGCGAGCTTCTCAAG
AGCCTGGCGCTTATGGGAGTGGGCTGCGGTAG
back to top