mRNA_Ecto-sp6_S_contig10.604.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig10.604.1
Unique NamemRNA_Ecto-sp6_S_contig10.604.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.604.1 vs. uniprot
Match: D7FVK8_ECTSI (Asparagine synthetase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVK8_ECTSI)

HSP 1 Score: 646 bits (1666), Expect = 2.080e-233
Identity = 342/347 (98.56%), Postives = 346/347 (99.71%), Query Frame = 1
Query:    1 MQNTLRTLRSRVLSLGTSAADGKNIVAFSGGVDSSLVAALVHHAFPRSSQACVGVSSALPAAQLDLARSVANRIGIPLTEISTTEGSDPDYIANEGQSCFHCKTHLYSALEAVAVQAGVESRRSSAAAVGDGEPSTSALEGGGADGAGGIVEGGQRVVLFNGTNKDDKRDTTRVGLKAAADFQVASPIDMLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAARKRLDLGVSHNLRVRAMHGNKALLEVDAGEILEEALRSIEDIRSLILPLGFGEVDVRPFRSGAVSGALTTPVAEQQKESEVNTKNLDGVEVYRVHGSTAAARGAGS 1041
            MQNT+RTLR+RVLSLGTSAADGKNIVAFSGGVDSSLVAALVHHAFPRSSQACVGVSSALPAAQLDLARSVANRIGIPLTEISTTEGSDPDYIANEGQSCFHCKTHLYSALEAVAVQAGVESRRSSAAAVGDGEPSTSALEGGGADGAGGIVEGG+RVVLFNGTNKDDKRDTTRVGLKAAADFQVASPIDMLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPE+LVLVEKAEDAARKRLDLGVSHNLRVRAMHGNKALLEVDAGEILEEALRSIEDIRSLILPLGFGEVDVRPFRSGAVSG LTTPVAEQQKESEVNTKNLDGVEVYRVHGSTAAARGAGS
Sbjct:    1 MQNTIRTLRARVLSLGTSAADGKNIVAFSGGVDSSLVAALVHHAFPRSSQACVGVSSALPAAQLDLARSVANRIGIPLTEISTTEGSDPDYIANEGQSCFHCKTHLYSALEAVAVQAGVESRRSSAAAVGDGEPSTSALEGGGADGAGGIVEGGRRVVLFNGTNKDDKRDTTRVGLKAAADFQVASPIDMLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPEKLVLVEKAEDAARKRLDLGVSHNLRVRAMHGNKALLEVDAGEILEEALRSIEDIRSLILPLGFGEVDVRPFRSGAVSGGLTTPVAEQQKESEVNTKNLDGVEVYRVHGSTAAARGAGS 347          
BLAST of mRNA_Ecto-sp6_S_contig10.604.1 vs. uniprot
Match: A0A836CNR6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNR6_9STRA)

HSP 1 Score: 291 bits (746), Expect = 5.260e-94
Identity = 174/309 (56.31%), Postives = 206/309 (66.67%), Query Frame = 1
Query:    1 MQNTLRTLRSRVLSLGTSAADGKNIVAFSGGVDSSLVAALVHHAFPRSSQACVGVSSALPAAQLDLARSVANRIGIPLTEISTTEGSDPDYIANEGQSCFHCKTHLYSALEAVAVQA--GVESRRSSAAAVGDGEPSTSALEGGGADGAGGIVEGGQRVVLFNGTNKDDKRDTTRVGLKAAADFQVASPIDMLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAARKRLDLGVSHNLRVRAMHGNKALLEVDAGEILEEALRSIEDIRSLILPLGFGEVDVRPFRSGAVSG 921
            M++ +RTL+ R+ + GT    G N+VAFSGGVDSS+VAALVH  FP +S AC+GVS +LPAAQ +LA ++A+RIGI L E+ T EGSDP+YIAN GQSC+HCK+HLYSALEA+A  A   V SR       GDG+                      R VLFNGTN++D+ DTTRVGLKAAA++ V+SPID LTKA+VRAVAR L LPNW+HAASPCLRSRLAFGV ATP  L  VE+AE AAR  L LG   NLRVRAM   +AL+EVDA   L                      DVR FRSGAVSG
Sbjct:    1 MRSLIRTLQRRIEAEGT--LRGHNLVAFSGGVDSSVVAALVHEVFPSNSLACLGVSPSLPAAQRELAHTIADRIGIGLREVVTQEGSDPEYIANRGQSCYHCKSHLYSALEAIAADATAAVHSRNG-----GDGD---------------------SRNVLFNGTNQEDRSDTTRVGLKAAAEYSVSSPIDTLTKAQVRAVARALALPNWDHAASPCLRSRLAFGVAATPASLARVERAEAAARALLALGPRDNLRVRAMAAERALVEVDAAR-LXXXXXXXXXXXXXXXXXXXXXXDVRAFRSGAVSG 280          
BLAST of mRNA_Ecto-sp6_S_contig10.604.1 vs. uniprot
Match: A0A6V1PUF6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PUF6_HETAK)

HSP 1 Score: 271 bits (694), Expect = 1.520e-86
Identity = 162/315 (51.43%), Postives = 201/315 (63.81%), Query Frame = 1
Query:   22 LRSRVLSLGTSAADGKNIVAFSGGVDSSLVAALVHHAFPRSSQACVGVSSALPAAQLDLARSVANRIGIPLTEISTTEGSDPDYIANEGQSCFHCKTHLYSALEAVAVQAGVESRRSSAAAVGDGEPSTSALEGGGADGAGGIV--EGGQRVVLFNGTNKDDKRDTTRVGLKAAADFQVASPIDMLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAARKRLDLGVSHNLRVRAMHGNKALLEVDAGEILEEALRSIEDIRSLILPLGFGEVDVRPFRSGAVSGALTTPVAEQQKES 960
            L +RV +LGT    G NI+AFSGGVDSSL AALVH  FP++S AC+G+S+ALP  QL LAR VA+ IGI L E+ T EG D DYIAN+G++C+HCKTHLYS+L AVA  A  +                           G I+  +G ++V+LFNGTNKDD RD TR+GLKAA +F+VASP+  +TK EVR  A+ LGLPNW HAASPCLRSRLAFGV AT E L  ++KAE   R+ L LG   NLRVRA +  +A + VD   +LE        I   IL LGF  V  R +R+G +SG      AEQQ+ +
Sbjct:   11 LLARVSNLGT--RRGSNIIAFSGGVDSSLSAALVHKVFPQNSSACIGISAALPQDQLILAREVASSIGIHLQEVRTNEGYDADYIANKGKACYHCKTHLYSSLMAVAELAAAK---------------------------GNIIGTDGKEKVILFNGTNKDDLRDDTRIGLKAAENFKVASPLAEITKDEVRLAAKALGLPNWQHAASPCLRSRLAFGVAATKENLERIDKAEAIVRRHLGLGPEVNLRVRAANPTRAAVAVDQS-LLEAVATHFPRIEEKILALGFKNVSFRAYRTGMMSG-----FAEQQQNT 290          
BLAST of mRNA_Ecto-sp6_S_contig10.604.1 vs. uniprot
Match: A0A6G0W843_9STRA (Asparagine synthetase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W843_9STRA)

HSP 1 Score: 259 bits (662), Expect = 7.430e-82
Identity = 152/311 (48.87%), Postives = 197/311 (63.34%), Query Frame = 1
Query:   13 LRTLRSRVLSLGTSAADGKNIVAFSGGVDSSLVAALVHHAFPRSSQACVGVSSALPAAQLDLARSVANRIGIPLTEISTTEGSDPDYIANEGQSCFHCKTHLYSALEAVAVQAGVESRRSSAAAVGDGEPSTSALEGGGADGAGGIVEGGQRVVLFNGTNKDDKRDTTRVGLKAAADFQVASPIDMLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAARKRLDLGVSHNLRVRAMHGNKALLEVDAGEILEEALRSIEDIRSLILPLGFGEVDVRPFRSGAVSGALTTPVAE 945
            L+ L SRV   G++  D  N+VAFSGGVDSSLVAA+VH  FP +S AC+GVS+A+PA QLDLAR +A  IGIPL E  T+EG DP Y+ N GQSC++CKT+LY+ L  VA    V+S                             +  G   +L+NGTN DDK D TR+GL AA +F+V SP++ LTKAEVR  ++ELGLPNWN+AASPCLRSRLAFGV AT E L  +E+AE A R  + L  S N+RVR +  N+A +E+DA          ++  + +   +GF +  VRPF+SG+VSG  +T V E
Sbjct:    2 LQRLLSRVRQTGST--DRLNVVAFSGGVDSSLVAAVVHKTFPENSIACLGVSAAVPADQLDLAREIARYIGIPLWETPTSEGQDPRYVENIGQSCYYCKTNLYTTLNQVASH--VKSN----------------------------IPEGTVPILYNGTNSDDKLDPTRLGLIAANEFRVVSPLEDLTKAEVRQASKELGLPNWNYAASPCLRSRLAFGVSATKEHLSRIERAERAIRSMMALKPSDNMRVRFLAQNRAAVELDASRQQSLLPEEVQAAQEICKQIGFVDAIVRPFKSGSVSGFQSTVVKE 280          
BLAST of mRNA_Ecto-sp6_S_contig10.604.1 vs. uniprot
Match: A0A024U4X0_9STRA (NAD_synthase domain-containing protein n=6 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U4X0_9STRA)

HSP 1 Score: 258 bits (660), Expect = 1.310e-81
Identity = 149/308 (48.38%), Postives = 191/308 (62.01%), Query Frame = 1
Query:   13 LRTLRSRVLSLGTSAADGKNIVAFSGGVDSSLVAALVHHAFPRSSQACVGVSSALPAAQLDLARSVANRIGIPLTEISTTEGSDPDYIANEGQSCFHCKTHLYSALEAVAVQAGVESRRSSAAAVGDGEPSTSALEGGGADGAGGIVEGGQRVVLFNGTNKDDKRDTTRVGLKAAADFQVASPIDMLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAARKRLDLGVSHNLRVRAMHGNKALLEVDAGEILEEALRSIEDIRSLILPLGFGEVDVRPFRSGAVSGALTTP 936
            L  L +RV   G+S     N+VA+SGGVDSSLVAALVH  FP +S AC+GVS+AL   QL LAR VA  IGIPL E  T+EG DP Y+ N+GQSC++CKT+LY+ L  VA +   +S                                G   VLFNGTN DDK D TR+GL AA +FQV SP++ LTKA VR +++++GLPNWN+AASPCLRSRLAFGV A P+ L  +EKAE A R  + L    NLRVR +  N+A +E+DA  +     R ++ I+ +   LGF +  VRPF+SG++SG    P
Sbjct:    3 LENLLARVRHAGSS--KHVNVVAYSGGVDSSLVAALVHRVFPENSIACLGVSAALSQDQLTLARDVATAIGIPLWETRTSEGEDPRYVENKGQSCYYCKTNLYTTLSQVAERVKAQSP-------------------------------GVAPVLFNGTNADDKFDPTRLGLVAATEFQVVSPLENLTKASVRQISKQIGLPNWNYAASPCLRSRLAFGVAANPDHLARIEKAEHAVRSTVALTPVDNLRVRFLAHNRAAVELDAATVRALLPRQVDAIQVICKELGFDDAIVRPFKSGSLSGFSAAP 277          
BLAST of mRNA_Ecto-sp6_S_contig10.604.1 vs. uniprot
Match: A0A7S2W2V8_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W2V8_9STRA)

HSP 1 Score: 258 bits (658), Expect = 7.060e-81
Identity = 154/281 (54.80%), Postives = 185/281 (65.84%), Query Frame = 1
Query:   55 AADGKNIVAFSGGVDSSLVAALVHHAFPRSSQACVGVSSALPAAQLDLARSVANRIGIPLTEISTTEGSDPDYIANEGQSCFHCKTHLYSALEAVAVQAGVESRRSSAAAVGDGEPSTSALEGGGADGAGGIVEGGQRVVLFNGTNKDDKRDTTRVGLKAAADFQVASPIDMLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAARKRLDLGVSHNLRVRAMHGNKALLEVDAGEILEEALRSIEDI-RSLILPLGFGEVDVR 894
            A  GKNIVAFSGGVDSSLVAALVH   P SS AC G+S++LP AQLDLAR VA  IGI + E+ T+EGS P+Y+ANEG +C+HCK+ LY+AL AVA           A+ VG G P+T                    VVL+NGTN DD+RD TRVGL+AA  FQVASP+  L+K EVR  A+ LGLPNWNHAASPCLRSRLA GV AT E L  +E AE   R  +   V HNLRVR +   KA++EVD+ E LE      +D  R+ +L LGF +V+VR
Sbjct:   18 AQPGKNIVAFSGGVDSSLVAALVHRVAPASSLACTGISASLPEAQLDLARHVAEHIGIQMREVPTSEGSHPEYLANEGMACYHCKSELYTALGAVA---------RFASGVGTGGPATP-------------------VVLYNGTNADDQRDPTRVGLRAAEHFQVASPVSHLSKDEVRQAAKHLGLPNWNHAASPCLRSRLALGVSATDETLRRIESAERFVRSIVPFDVHHNLRVRLLAKQKAVVEVDS-EKLELTEGLFDDTKRTELLSLGFAKVEVR 269          
BLAST of mRNA_Ecto-sp6_S_contig10.604.1 vs. uniprot
Match: A0A485LSD2_9STRA (Aste57867_23475 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LSD2_9STRA)

HSP 1 Score: 251 bits (641), Expect = 9.620e-79
Identity = 138/288 (47.92%), Postives = 181/288 (62.85%), Query Frame = 1
Query:   70 NIVAFSGGVDSSLVAALVHHAFPRSSQACVGVSSALPAAQLDLARSVANRIGIPLTEISTTEGSDPDYIANEGQSCFHCKTHLYSALEAVAVQAGVESRRSSAAAVGDGEPSTSALEGGGADGAGGIVEGGQRVVLFNGTNKDDKRDTTRVGLKAAADFQVASPIDMLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAARKRLDLGVSHNLRVRAMHGNKALLEVDAGEILEEALRSIEDIRSLILPLGFGEVDVRPFRSGAVSGALTT 933
            N+VA+SGGVDSSLVAA+VH  FP +S AC+GVS+ALPA QL +AR VA  IGIPL E  TTEG+DP Y+ N+G+SC++CKT+LY+ L  V      +                              +    + +LFNGTN DDK D TR+GL AA++F V SP++ L K  VR +++ELGLPNWN+AASPCLRSRLAFGV AT + L  +EKAE+  R  L L  + NLRVR + GN+A +EVD  ++       I  ++      GF  VDVR F+SG++SG  T+
Sbjct:   19 NVVAYSGGVDSSLVAAIVHRVFPDNSIACLGVSAALPAEQLLVARGVAQHIGIPLWETPTTEGNDPRYVENKGKSCYYCKTNLYTTLNQVVSHIKTQ------------------------------MPAEAKPILFNGTNADDKLDPTRLGLVAASEFHVVSPLEALAKTSVRELSKELGLPNWNYAASPCLRSRLAFGVAATRDHLARIEKAEETVRSHLALTRADNLRVRFLAGNRAAIEVDLKKLESLLPTDIHSVQEACEKFGFAAVDVRAFKSGSLSGYSTS 276          
BLAST of mRNA_Ecto-sp6_S_contig10.604.1 vs. uniprot
Match: A0A4D9D8U2_9STRA (Asparagine synthetase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8U2_9STRA)

HSP 1 Score: 251 bits (642), Expect = 1.070e-77
Identity = 167/349 (47.85%), Postives = 205/349 (58.74%), Query Frame = 1
Query:   31 RVLSLGTSAADGKNIVAFSGGVDSSLVAALVHHAFPRSSQACVGVSSALPAAQLDLARSVANRIGIPLTEISTTEGSDPDYIANEGQSCFHCKTHLYSALEAVAVQAGVE-----SRRSSAAAVGDGEPSTSALEGGGADGAGGIVEGGQRVVLFNGTNKDDKRDTTRVGLKAAADFQVASPIDMLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAARKRLD--------------LGVSHNLRVRAMHGNKALLEVDAGEILEEALRSIEDIRSLILP-LGFGEVDVRPFRSGAVSGALTTPVAEQQK-----ESEVNTKNLDGVEVYR 1002
            RV   GTS   G N++A+SGGVDSSLVAALV   FP +S AC+G+S++LP  QL LAR VA  IGIPL EI T EG+ P+Y+AN G SCFHCKTHLY+AL+AVA   G       S     +  G    +   ++  GAD +   V     V LFNGTN DD+RD TRVGLKAA  F+V SPID LTK EVR +A+ + LPNW HAASPCLRSRLAFGV A    L  VE AE   +  L               LGV HN+RVR M   KA++E+D  E+LE A   +          LGF EV +R F+SG+VS    T VA   +       +   K  +GV +Y+
Sbjct:   26 RVRLEGTST--GTNLIAYSGGVDSSLVAALVRQVFPSNSVACIGLSASLPDNQLTLARQVAAHIGIPLREIPTYEGAAPEYVANRGMSCFHCKTHLYTALQAVAAVVGTHMNGPLSSNFLHSTQGGSTETLQHVKMNGADASAPSV-----VALFNGTNADDRRDPTRVGLKAATKFKVRSPIDHLTKEEVRLLAKAMNLPNWQHAASPCLRSRLAFGVPALEAHLRRVETAERIVKATLGGKFDDKEGEGGLSKLGVHHNVRVRLMARGKAMIELDV-ELLESAASYLSTFEGRFKKELGFTEVSLRAFKSGSVS--CITKVASGTEGGGKGAKQPGRKESNGVGIYQ 364          
BLAST of mRNA_Ecto-sp6_S_contig10.604.1 vs. uniprot
Match: A0A067C1Q5_SAPPC (NAD_synthase domain-containing protein (Fragment) n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C1Q5_SAPPC)

HSP 1 Score: 245 bits (625), Expect = 4.970e-76
Identity = 146/284 (51.41%), Postives = 176/284 (61.97%), Query Frame = 1
Query:   70 NIVAFSGGVDSSLVAALVHHAFPRSSQACVGVSSALPAAQLDLARSVANRIGIPLTEISTTEGSDPDYIANEGQSCFHCKTHLYSALEAVAVQAGVESRRSSAAAVGDGEPSTSALEGGGADGAGGIVEGGQRVVLFNGTNKDDKRDTTRVGLKAAADFQVASPIDMLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAARKRLDLGVSHNLRVRAMHGNKALLEVDAGEILEEALRSIEDIRSLILPLGFGEVDVRPFRSGAVSG 921
            N+VAFSGGVDSS+VAALVH AFP +S AC+GVS+ALP+ QL LAR VA  IGIPL E  TTEG+DP YI N+GQSC++CKT+LY+ L  VA       R                              G  R  LFNGTN DDK D TR+GL AA++FQV SP+  LTK++VRA+A E GL NWN AASPCLRSRLAFGV AT + L  V  AE   R  L L    NLRVR +  N A +E+DA   L  ++     + +  + LGF +  VR FRSG+VSG
Sbjct:   19 NVVAFSGGVDSSVVAALVHEAFPTNSVACLGVSAALPSEQLALARKVATDIGIPLWETPTTEGADPLYIENKGQSCYYCKTNLYTTLNDVATHVHTTHR------------------------------GSGRPRLFNGTNADDKLDPTRLGLVAASEFQVVSPLQDLTKSDVRALANERGLLNWNFAASPCLRSRLAFGVTATADHLQRVAAAEAFVRSFLRLAPHENLRVRFLPQNHAAIELDAARHLALSVTETAILAAKCVELGFTKTHVRAFRSGSVSG 272          
BLAST of mRNA_Ecto-sp6_S_contig10.604.1 vs. uniprot
Match: W4FHZ1_9STRA (NAD_synthase domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FHZ1_9STRA)

HSP 1 Score: 244 bits (623), Expect = 1.200e-75
Identity = 153/326 (46.93%), Postives = 196/326 (60.12%), Query Frame = 1
Query:   13 LRTLRSRVLSLGTSAADGKNIVAFSGGVDSSLVAALVHHAFPRSSQACVGVSSALPAAQLDLARSVANRIGIPLTEISTTEGSDPDYIANEGQSCFHCKTHLYSALEAVAVQAGVESRRSSAAAVGDGEPSTSALEGGGADGAGGIVEGGQRVVLFNGTNKDDKRDTTR---------------------VGLKAAADFQVASPIDMLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAARKRLDLGVSHNLRVRAMHGNKALLEVDAGEILEEAL--RSIEDIRSLILPLGFGEVDVRPFRSGAVSG 921
            L  L +RV   G+S     NIVA+SGGVDSSLVAALVH  FP +S AC+GVS+ALP  QL LAR+VA+ IGIPL E  T+EG+DP Y+ N+GQSC++CKT+LY+ L  VA     +   SS                       G++      V+FNGTN DDK D TR                     +GL AA +FQV SP++ L+KA VR ++++LGLPNWN+AASPCLRSRLAFGV A P+ L  +EKAE   R  L L  + NLRVR +  N+A +E+DA +  E AL    I  + ++   LGF  V VR F+SG+VSG
Sbjct:    2 LDQLLARVRQAGSS--KHVNIVAYSGGVDSSLVAALVHRVFPENSIACLGVSAALPQDQLLLARNVASAIGIPLWEARTSEGNDPRYVENKGQSCYYCKTNLYTTLNQVAAHVKAQGCSSSP----------------------GVIP-----VMFNGTNADDKLDPTRLGTNVHIYSSSSTLVLFIMFCIGLVAATEFQVVSPLEHLSKASVRQISKDLGLPNWNYAASPCLRSRLAFGVSANPDHLARIEKAEGEVRSSLALARTDNLRVRFLANNRAAVELDAEK--ERALLPTQIHHVETICRDLGFDHVVVRSFKSGSVSG 296          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.604.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVK8_ECTSI2.080e-23398.56Asparagine synthetase domain-containing protein n=... [more]
A0A836CNR6_9STRA5.260e-9456.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6V1PUF6_HETAK1.520e-8651.43Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A6G0W843_9STRA7.430e-8248.87Asparagine synthetase domain-containing protein n=... [more]
A0A024U4X0_9STRA1.310e-8148.38NAD_synthase domain-containing protein n=6 Tax=Aph... [more]
A0A7S2W2V8_9STRA7.060e-8154.80Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A485LSD2_9STRA9.620e-7947.92Aste57867_23475 protein n=1 Tax=Aphanomyces stella... [more]
A0A4D9D8U2_9STRA1.070e-7747.85Asparagine synthetase domain-containing protein n=... [more]
A0A067C1Q5_SAPPC4.970e-7651.41NAD_synthase domain-containing protein (Fragment) ... [more]
W4FHZ1_9STRA1.200e-7546.93NAD_synthase domain-containing protein n=5 Tax=Aph... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:1929099..1935324 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score651.4
Seed ortholog evalue2.4e-184
Seed eggNOG ortholog2880.D7FVK8
Model size1044
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.tRNA processing
EggNOG OGs2RYIH@2759,COG1606@1
Ec32 ortholog descriptionRossmann-like alpha/beta/alpha sandwich fold
Ec32 orthologEc-15_003670.1
Cds size1044
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.604.1prot_Ecto-sp6_S_contig10.604.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig10 1929099..1935324 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348712.4529912-CDS-Ecto-sp6_S_contig10:1929098..19293211682348712.4529912-CDS-Ecto-sp6_S_contig10:1929098..1929321Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1929099..1929321 +
1682348712.462975-CDS-Ecto-sp6_S_contig10:1931843..19321381682348712.462975-CDS-Ecto-sp6_S_contig10:1931843..1932138Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1931844..1932138 +
1682348712.4710076-CDS-Ecto-sp6_S_contig10:1932656..19327231682348712.4710076-CDS-Ecto-sp6_S_contig10:1932656..1932723Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1932657..1932723 +
1682348712.4798741-CDS-Ecto-sp6_S_contig10:1933253..19333761682348712.4798741-CDS-Ecto-sp6_S_contig10:1933253..1933376Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1933254..1933376 +
1682348712.488905-CDS-Ecto-sp6_S_contig10:1934281..19343711682348712.488905-CDS-Ecto-sp6_S_contig10:1934281..1934371Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1934282..1934371 +
1682348712.499693-CDS-Ecto-sp6_S_contig10:1935078..19353241682348712.499693-CDS-Ecto-sp6_S_contig10:1935078..1935324Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1935079..1935324 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig10.604.1

>prot_Ecto-sp6_S_contig10.604.1 ID=prot_Ecto-sp6_S_contig10.604.1|Name=mRNA_Ecto-sp6_S_contig10.604.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=348bp
MQNTLRTLRSRVLSLGTSAADGKNIVAFSGGVDSSLVAALVHHAFPRSSQ
ACVGVSSALPAAQLDLARSVANRIGIPLTEISTTEGSDPDYIANEGQSCF
HCKTHLYSALEAVAVQAGVESRRSSAAAVGDGEPSTSALEGGGADGAGGI
VEGGQRVVLFNGTNKDDKRDTTRVGLKAAADFQVASPIDMLTKAEVRAVA
RELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAARKRLDLGVS
HNLRVRAMHGNKALLEVDAGEILEEALRSIEDIRSLILPLGFGEVDVRPF
RSGAVSGALTTPVAEQQKESEVNTKNLDGVEVYRVHGSTAAARGAGS*
back to top

mRNA from alignment at Ecto-sp6_S_contig10:1929099..1935324+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig10.604.1 ID=mRNA_Ecto-sp6_S_contig10.604.1|Name=mRNA_Ecto-sp6_S_contig10.604.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=6226bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:1929099..1935324+ (Ectocarpus species6 EcLAC_371)
ATGCAAAACACACTTCGCACGCTCAGATCACGGGTGCTCTCGCTGGGTAC GTCGGCCGCTGATGGGAAGAACATCGTAGCCTTTTCCGGCGGCGTGGATT CGTCCTTGGTGGCGGCGTTGGTGCATCATGCCTTTCCGAGGAGCAGCCAG GCCTGCGTCGGCGTGTCATCGGCGCTGCCTGCGGCCCAGCTGGACCTGGC ACGAAGCGTAGCGAACCGTATTGGTGAGCTCGTGGCGACTATAGCAGTGT ATGGTTGAGGTTCTTCGGTTCAACAGCGGTTGTGCGTGTACCGTCAGGTC GAGGTTCTGGACAGTTGAAGCATGTGTGTTTTTTCAGCGTGGACGAGCAC CGGTCTCTGATGTTCCTTAAGTGTTGCAATAGGAAAGTAGCTTGTTTGCA CGGACATATTGTAGCTGCGACACGGTTGGAATCGAGAAAGGACGCAACAA TCTCGTCATAGCTCCGCGGTCCTGGAACCTACAGCAGTCATGCATAGATC GTGTAAACATGACGCCGCCGATGATTGCGCCGCATTTTTTACCCAATTTT CTTTGTAAGACACGCTGCTCCTGTAGGCCGCATGGCCAGAATTGCACACC GAGACGTCGCTCCCACATCAACAGAAGTTAGTCCAGGAACAACCACAGAA TTCAGGGGCAAGCGTGTCTTCTATCCTAACCACTCTTTTTGAAACCAGAC CAAGAGGTCGACGCCCGTAGCAATAGCGGGTATAGACCAGCGTAGTGCCC GATGATGAGGCCATTTGTTACGGTGTCTTTCGTATTAGGCCTTTTCTCCC CCAAAAGAGACGACCCAAAAAATGATCTACAAAAAATATAACCCCCTTCT TGCGGTGCTGGTCCATCCTTTTTTCAATTCCGAGTCATCGACCGAAAAAA AGAGACCCTGCAACGGCCGTTCGTCACACATACATACACCTTCCACCGCT ATGGTGTTTCGGTGATGTCTCCGCATACAGCAGTGAAGCAACAGCGATGA AAGAGGCATCCGCCATGAGCTGTGTGTATGGTCCGTCTTGGGTGGTGGCT GTTAGAGACCACAGGGCGATTGGAGGCACGGAAACTGAGGAGGCGAGGGT CAACAGCACGCCGGAAAAATACCCACCGCGCCAGCAACCAGTTTTTTTGC TCTTTGGCCTGTGTCGCAGCTTTGGTTTATCGATGCTCCCTCGCCACCCA CTCCAGCACCAGCGATGACAAAGGTATCCGCCATGAGCTGTGTGTATGGT CCGCCTTGTGTGGTGGTTGATACAGACCAGGAGGCTGAAGGGCGCTCAAA AATTGTGAGCGCAAGAGTCGTGAACAAGCGGGAAAAATGACCCGCCTCGT CTTCAAGCAATTTGTTTTGCTCTTTCGCCCGTGTCGCAACTTTGGTTCAT CGATGCTCCCTCGCCACCCACTCCAGCAACAGCGATGACAAAGGTATCCG CCATGAGCTGCGCGTATGGTCCGTCTTGTGTGGTGGTTGACACAGATCAG GAGGCTATAGGGCGCCCAAAAGTTGGGTTCGCAAAAGTTGACAGCACACC AACAAAGACCCCCCGCTGCTGCGTCCAGACTCTCTCGGTAGCGTTGTTTT TTCATTCGGCTGGACCAAGTGGACATGTCCACTTGGTCCAGCCGAATGAA AAAACAACGCTACCGCTGATGCTACTGACTCTGAACCAGTCACATGACAC AGCTCGTGTGAACACCGTTAGAGTTTGCGGGGATCAACAGTCACATGACA CAGCTCGTGTGAACACCGTTAGAGTTTGCGGGGATCAACCGTCGAGAGAT TAAGTTTGTAGGTAGCGTCATGTGGTTGTGACCAAAACAAGACCATAGAA AAAGACGGCCCCGACTTATCCAAAACTGCCCCAGAAAAAGACAGGATGGG CTGTCCAAAACGGGTTGTCTTTTTTTGTTGGCCTTTTTTCCCTGAAAAAA GACACCGTAAGAAGGGGTTCTGTGGCCAGTTGGCTTTTTTATTAGGAAAA AAGGAGAAGACAGCTCCAAAACCCCCCGTAAGAAATGGCCTAAGCCAACA AACCTTTCAATTTCATAACCACGAGGAGACATATTGTGGGGGATACGTGC CCTGCATTCTACTGCCAATGGCTGATCGTGAGCGTAGAGCGTGGGTATAG ATTTTAGAGAAGTAATGGCATGCCGACAAGAGCCTTCTTGGACAGCAGTC GATTTCCACCGAAAGCATGCAACCCTTTTCAGCACACCCAGTAGATGATG AGGAGGTGGCATTGGAGCCTACGTTACCAGACATACGAATCACAATGAGA TGCAGATCAGTTTCGTATTTAGTGAACAACGGAGAAGAGGAGCGTCAGCA TGCATTCGCCGCTGGTTGGTGGCAAGCGTTCGGTAGGCGTGCGGAAAAAA GGCTTGAGCGTAGAAACTCAATCCGACGTTTGTCTACCCACACAAAAACT CGCAACTTTATTTCGTTGGGGGAGCGAAGACAACGCAGCCGGTATCTCGC TTCTTGCTGGTCGTATCGAAGTAGAACGTGCAACTCTGTCACCTCTATGC CCTGTCCATGCGATCAGCATAGACAGCATCATCGGTGGCGTGGTGCGATT TGCTTTCCAACATGTGTAAGCTAAACAGACGGTGTGTTCAGAGTCTAGAC CCCTACCCCTCCGGGCACTTGGTTCTTAGAACGCCCGCACGACCTATTTC CTGATCCTGTCTCTTCACTTGTTTGCTTTCGGTTTCGTGCTGAAGGGATC CCTCTCACGGAGATTTCCACCACGGAAGGCTCCGACCCCGACTACATCGC CAACGAGGGCCAGAGCTGTTTCCACTGCAAGACGCACCTTTACTCCGCGC TAGAAGCGGTCGCCGTACAGGCCGGGGTGGAGTCCCGCCGTAGCAGCGCG GCTGCCGTGGGGGATGGAGAGCCAAGCACGAGTGCCCTCGAGGGTGGTGG TGCTGATGGCGCCGGGGGGATTGTTGAGGGAGGGCAAAGGGTGGTGCTGT TCAACGGCACCAACAAGGATGACAAGCGCGATACCACTAGGTGGGTGCTT GGGCCATCCTTCCCGTGGACTGGAGTACCGTGTTGTGTCGGGGTATGCGA AGCTGTTGGCACGTTTCTTGTTGTGTTCCACGTGGCATGGATGTTTCTTT TTTCGCGGCAGTTCGGTGCGTGTGCACTGAAGAGGGAACAACTTGCCGTG CACACAGCAGCACCCTAATCGGAGTTTCCAGCGTACGCTCATGTAACCCC TGCGGAAATAGTCCTGAACAATAGACCTTCCACGCACCCAGCCCTCTCGC AATTCATGTCCCGGTGTTTACGGGATTCCAGGGTCGGTCCAAGAACTGTG GCAAGCGGGTTCACAGAGTCGCAGCTATCCCGTTACACATCTCCACATAA CACGCCTTGGTGCGGTCTTGTTTCCCCCTGAAGTGCCATGTGTCCCGAGC AACAGCGCGAGTCCACCTACCAGTGATGTAAATAGGTGATTTTTATCTAC CCGACCCGTCCTCGCTCGTGTGTGGGACCATATTTTGTTGCTGTCGTTGT TGTTGCAGGGTTGGCCTGAAAGCTGCAGCAGACTTTCAGGTGGCAAGTCC GATAGACATGCTGACCAAGGCAGAGGTGGGTGCTCCTCAGGCTCAGCGGG AACTGTGTCGATGGTAACGTGTTCATGTTCAGGGGGATAGATGTTCGAGC AAAAGAGATTTGAACTTGCACGTACATGGTGTTTTTTTTAGTGTTTGCTC AAATACAGGGAACGTTTTGGTGTTAAGCGTGGTGCGTTTGAAAGTTCGTG CGGAAGGACGGCTTTGGCGGTGCGTCCGGCGACGTGGTTGCAGCGTCCCA AGGGAACGGAAGCCAAGCCCGCTACCCATGGTAACCAGTTTGTTGCCGGT AAACTTGAGGCGCTGAGAGAGGACAAGAAGACAAGTGGGTTGGAGGGAAG GCCGCATTTGCAGTCCCATCGGTGGCATATGGAAGAGTCGCAGATCTGCC AGTGGGTCCCCGAGTTCCGACGGTGTTGACCACACGCGTCTGCCTCTGAG TTTGTTGCCTGTGAAACCTTCCTGTAGCTCGCTCCATTGAAGCCCGTAAT TCCGTTCAAACCGTTCCTTTCGTTACTGGTGGCGTCCTGATGGTTCTCTT TTCAGGTGCGGGCTGTTGCCCGAGAGTTGGGTCTGCCGAACTGGAATCAC GCCGCGTCTCCGTGTCTGCGGTCGAGATTGGCCTTTGGAGTGCAGGCCAC GCCGGAGAGGCTTGTTCTCGTCGAGAAGGTGCGTGCTGGTGCTTGCGTGG GTCACTGCTGTGTGTGTGCTTGCTTAGTTGAAAGTGCGCGTGGGTGTTTT CTCAATTAGCATCGACCGCGCCAACCGACTGGTCAATGAAAAGTCGTCAG TCTTGTAGCGGGCTAGAAATACGAACACTTTCTAATCAAAAAGGTTAGGG TAAGGGTTCTCCCGACAGAGGGGGTGCAGGAGCTGGAAGATAGTGTCCGT TTGCGTGTTCGTGTTGTGCGTTTGCGCTTTCCTTTTGTCGAAACGTCCGT CCTGGCATGCCTATGTGACGACCCGCTAGCTCCCCTTTTACGGTACATGA GTTTCGTCGACAGTGCTAATTGGTTCAAGTATAGCAACCTGTGAATCGTA ACGGGAAATTCAAGTTGTAGCGGGAAAAGGCAGACCCCCCCCGTGTCGAG CTTAGACCAGAAAACGCGCGGAGTCTCATCGGATAAGATTTGTATGCGTA TTTGTTTTCCGTGTATACGTGGTGCTCCTCGGCCGTGCTGGCCCTCTAAT CCCACGGAACGTATTAGCCACCGAGAAGCCTCGTTCGCACGTGGACCCTT CTTGATACTCGTGCTTGTGTTTCATTTGATCATTGGTGGCGACCCTCGGA GAAACCTCTCTCTCGCCAAGAGGCGTCTGTCAGTGACGCGAACACAGCCT ATTTCTTGTTTCATATTCCAGCGTTGCGCATGCCATTGGCAGAAGTGAAC GCTCCCTGTTTCTACCAGCGGGGGAGGCAGCGAGATAGCGCTTGGGCCCT GGGCATGTTCTTGAACCGTTGCACTTGCGGTTGTCCTCCATTTCAGCCGT GTATGACTTGACCACTATTCTCGATTTCGTTGCCTCTTTGGTTAATAATG AATTCGTGTCGCGAAAATGTTGTGTTCCGACAGGCGGAAGACGCTGCACG AAAACGATTAGACCTGGGCGTGTCCCACAACTTGCGCGTGCGAGCCATGC ACGGCAACAAGGCCCTGCTTGAGGTGAGCATCACATACAAGCCCCCTCGT AACCCGGTCTCGGTAGAATGCCGTGACTCAAGCGCCGACGCACGGGTCCC TATCAAACTCCCGCGTATTTCCCACAGATTTTTTCATTATCGCCCATTTT GTTTCCAAGCAGTTCCTTTTCTCTTTCTTGAGATGAAAGCGGCAAGGCCG ATTGGGCTATCTCTGGGGTAGGGAGACTGCTTTCGCACTCCTCGACGACA ACGAAAGCGCCAATGCCGATAAAGGGATTCTTCTGAAGATGATCGCAGTT GCTCTGCTGTTGTCTCGTGTAACCTCCATGTTGCGGGGGAATAGGTTGAA GGGAACAGACCCCACAACCTCGGAAGCTGACCCCGATTGCCAGAACATGG AAATTAGAGCGTCTGCTGCGCATCTTTCAGTGTCCGCACCACCCGGTGTT ACCATGTTTCGTTCATTCATATCTTTTTAGCAGGTGATTACATGTTGGTT GAATAGAATGAGTATGATGCGCAAATATCTTCAAAAGAACGCTGGGCGCA CGGCGATACAGCCATCACCTTGGGGCGCTGTGTGCATCCCTGCCTACTGC ATGACCAATACTCCCAACTGGGGGCAACATGGTGATTGTGTCGTTTGCGT ATCATCCTATTACCCGTTGCACGCGTCACTGCTTGCGTGCGCGGCGATAT TGTCTCTTATTGTTCCACACACAAACACAGGTTGATGCTGGTGAAATTCT CGAGGAAGCCTTGCGATCGATCGAGGACATCCGATCCCTGATTCTGCCGC TGGGGTTCGGTGAGGTAGACGTCCGACCCTTCCGAAGCGGAGCGGTTAGC GGTGCCCTCACGACACCGGTAGCAGAGCAGCAGAAGGAGAGCGAGGTGAA TACGAAAAACCTTGACGGCGTCGAGGTATATCGTGTGCACGGATCAACGG CAGCGGCGAGAGGAGCTGGATCTTGA
back to top

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig10:1929099..1935324+

>mRNA_Ecto-sp6_S_contig10.604.1 ID=mRNA_Ecto-sp6_S_contig10.604.1|Name=mRNA_Ecto-sp6_S_contig10.604.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1044bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:1929099..1935324+ (Ectocarpus species6 EcLAC_371)
ATGCAAAACACACTTCGCACGCTCAGATCACGGGTGCTCTCGCTGGGTAC
GTCGGCCGCTGATGGGAAGAACATCGTAGCCTTTTCCGGCGGCGTGGATT
CGTCCTTGGTGGCGGCGTTGGTGCATCATGCCTTTCCGAGGAGCAGCCAG
GCCTGCGTCGGCGTGTCATCGGCGCTGCCTGCGGCCCAGCTGGACCTGGC
ACGAAGCGTAGCGAACCGTATTGGGATCCCTCTCACGGAGATTTCCACCA
CGGAAGGCTCCGACCCCGACTACATCGCCAACGAGGGCCAGAGCTGTTTC
CACTGCAAGACGCACCTTTACTCCGCGCTAGAAGCGGTCGCCGTACAGGC
CGGGGTGGAGTCCCGCCGTAGCAGCGCGGCTGCCGTGGGGGATGGAGAGC
CAAGCACGAGTGCCCTCGAGGGTGGTGGTGCTGATGGCGCCGGGGGGATT
GTTGAGGGAGGGCAAAGGGTGGTGCTGTTCAACGGCACCAACAAGGATGA
CAAGCGCGATACCACTAGGGTTGGCCTGAAAGCTGCAGCAGACTTTCAGG
TGGCAAGTCCGATAGACATGCTGACCAAGGCAGAGGTGCGGGCTGTTGCC
CGAGAGTTGGGTCTGCCGAACTGGAATCACGCCGCGTCTCCGTGTCTGCG
GTCGAGATTGGCCTTTGGAGTGCAGGCCACGCCGGAGAGGCTTGTTCTCG
TCGAGAAGGCGGAAGACGCTGCACGAAAACGATTAGACCTGGGCGTGTCC
CACAACTTGCGCGTGCGAGCCATGCACGGCAACAAGGCCCTGCTTGAGGT
TGATGCTGGTGAAATTCTCGAGGAAGCCTTGCGATCGATCGAGGACATCC
GATCCCTGATTCTGCCGCTGGGGTTCGGTGAGGTAGACGTCCGACCCTTC
CGAAGCGGAGCGGTTAGCGGTGCCCTCACGACACCGGTAGCAGAGCAGCA
GAAGGAGAGCGAGGTGAATACGAAAAACCTTGACGGCGTCGAGGTATATC
GTGTGCACGGATCAACGGCAGCGGCGAGAGGAGCTGGATCTTGA
back to top