mRNA_Ecto-sp6_S_contig10.601.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig10.601.1
Unique NamemRNA_Ecto-sp6_S_contig10.601.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.601.1 vs. uniprot
Match: D7FVK5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVK5_ECTSI)

HSP 1 Score: 644 bits (1662), Expect = 1.540e-230
Identity = 348/359 (96.94%), Postives = 352/359 (98.05%), Query Frame = 1
Query:    1 MTAAPAITAQLNAAAAAA-TQQDGAEVFQVDNVDSEVEQPDAPAAAVAPAPAVTAREALRHSFTIGLSGGGATVFSVATMMWLHTIITYQQRHGTKFGETCKILWRQGGPRRFYRGVLPSLASAPLCRFGDTLSNELAMVWFHGQQXXXXXXXXNGTTISGGRGD--NTKLPVWVATFLGSMGAAAFHAVVVPLDTYKVIMQVDGKEGLAVMKKRIATRGPVAVYDGALAFAGGSLMGHYPWYLTYNLLEQSLPRTRKGEGRSRKARSAFIGAAASIVSAAASNAFRVLKVYRQSHDRPDGLSYAKSIKQIIKKDGGGTRGVLGVFGRGLGGRVAASSLQGLVFNMIWQEMAAWSNDER 1068
            MTAAPA TA LNAAAAAA TQQDGA VFQVDNVDSEVEQP APAAAVAPAPAVTAREALRHSFT+GLSGGGATVFSVATMMWLHTIITYQQRHGTKFGETCKILWRQGGPRRFYRGVLPSLASAPLCRFGDTLSNELAMVWFHGQQXXXXXXXX+GTTISGGRGD  +TKLPVWVATFLGSMGAAAFHAVVVPLDTYKVIMQVDGKEGLAVMKKRIATRGPVAVYDGALAFAGGSLMGHYPWYLTYNLLEQSLPRTRKGEGRSR+ARSAFIGAAASIVSAAASNAFRVLKVYRQSHDRPDGLSYAKSIKQIIKKDGGGTRGVLGVFGRGLGGRVAASSLQGLVFNMIWQEMAAWSNDER
Sbjct:    1 MTAAPATTAPLNAAAAAAATQQDGAGVFQVDNVDSEVEQPAAPAAAVAPAPAVTAREALRHSFTVGLSGGGATVFSVATMMWLHTIITYQQRHGTKFGETCKILWRQGGPRRFYRGVLPSLASAPLCRFGDTLSNELAMVWFHGQQXXXXXXXXSGTTISGGRGDRVDTKLPVWVATFLGSMGAAAFHAVVVPLDTYKVIMQVDGKEGLAVMKKRIATRGPVAVYDGALAFAGGSLMGHYPWYLTYNLLEQSLPRTRKGEGRSRRARSAFIGAAASIVSAAASNAFRVLKVYRQSHDRPDGLSYAKSIKQIIKKDGGGTRGVLGVFGRGLGGRVAASSLQGLVFNMIWQEMAAWSNDER 359          
BLAST of mRNA_Ecto-sp6_S_contig10.601.1 vs. uniprot
Match: A0A835ZPC0_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPC0_9STRA)

HSP 1 Score: 211 bits (536), Expect = 2.930e-61
Identity = 123/302 (40.73%), Postives = 175/302 (57.95%), Query Frame = 1
Query:  139 APAPAVTAREALRHSFTIGLSGGGATVFSVATMMWLHTIITYQQRHGTKFGETCKILWRQGGPRRFYRGVLPSLASAPLCRFGDTLSNELAMVWFHGQQXXXXXXXXNGTTISGGRGDNTK-LPVWVATFLGSMGAAAFHAVVVPLDTYKVIMQVDGKEGLAVMKKRIATRGPVAVYDGALAFAGGSLMGHYPWYLTYNLLEQSLPRTRKGEGRSRK-ARSAFIGAAASIVSAAASNAFRVLKVYRQSHDRPDGLSYAKSIKQIIKKDGGGTRGVLGVFGRGLGGRVAASSLQGLVFNMIWQ 1038
            AP+ +    +ALR +   GL+G  A V +V T+MWL T + YQ RHGT        L+++GG  RFYRGV+P+L   PL RFGDT +N   +                         D+TK LPV V T   S  AA +  V++P+DT K IMQV+GK G   +KK+    GP  +Y GA+A +  + +GHYPW+ TYN L++ +P   K     RK AR+A IG A+S+VS   SN+ RV+KVY+QS   P  ++Y ++ K +I  DG     VLG+FGRGL  ++ A+ +QGL+F++ W+
Sbjct:    9 APSASEVLNKALRKALGGGLAGASAMVMNVGTLMWLRTAMNYQYRHGTSTRAAITHLYKEGGIPRFYRGVVPALVQGPLSRFGDTAANTGVLALLESM-------------------DSTKGLPVGVKTLCASGAAALWRIVLMPIDTTKTIMQVEGKNGFPALKKKFKANGPSVLYHGAIAASAATFVGHYPWFFTYNYLQERIP---KETATLRKLARNAVIGFASSLVSDTCSNSIRVIKVYKQSSTEP--VTYLQAAKNVIASDG-----VLGLFGRGLKTKLIANGMQGLMFSVFWK 281          
BLAST of mRNA_Ecto-sp6_S_contig10.601.1 vs. uniprot
Match: A0A7R9YEQ5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YEQ5_9STRA)

HSP 1 Score: 204 bits (518), Expect = 3.320e-58
Identity = 111/292 (38.01%), Postives = 175/292 (59.93%), Query Frame = 1
Query:  166 EALRHSFTIGLSGGGATVFSVATMMWLHTIITYQQRHGTKFGETCKILWRQGGPRRFYRGVLPSLASAPLCRFGDTLSNELAMVWFHGQQXXXXXXXXNGTTISGGRGDNTK-LPVWVATFLGSMGAAAFHAVVVPLDTYKVIMQVDGKEGLAVMKKRIATRGPVAVYDGALAFAGGSLMGHYPWYLTYNLLEQSLPRTRKGEGRSRKARSAFIGAAASIVSAAASNAFRVLKVYRQSHDRPDGLSYAKSIKQIIKKDGGGTRGVLGVFGRGLGGRVAASSLQGLVFNMIWQ 1038
            +A++ +   G +G  A   +V T+MWL T + YQ R+GT      K L+ +GG  RFYRGVLP+L   PL RFGDT +N   MV                        D+TK LP  V T   S+ AA +   ++P+DT K  +QV+G++ L+ + K++   GP  +Y GALA A  + +GHYPW+ TYN L++++P+ +  E   +  R+A IG  +S+VS   SN+ RV+KVY+QS+   + LSY + ++++IK+DG     V+G+FGRGL  ++ ++ LQG++F+++W+
Sbjct:   48 KAIKRASGGGAAGAAAMFINVGTLMWLRTTVNYQYRYGTGTVTALKKLYAEGGIPRFYRGVLPALVQGPLSRFGDTAANTGVMVLMDSY-------------------DSTKDLPAVVKTGGASLAAACWRIFLMPIDTVKTTLQVEGRQALSQLFKKVGNHGPHVLYAGALAAASATFVGHYPWFATYNTLQETIPKPQDHETLKKFGRNAMIGFCSSVVSDTCSNSIRVVKVYKQSN--AEALSYPEVVRRVIKEDG-----VMGLFGRGLQTKILSNGLQGIMFSVLWK 313          
BLAST of mRNA_Ecto-sp6_S_contig10.601.1 vs. uniprot
Match: D8LEK6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEK6_ECTSI)

HSP 1 Score: 203 bits (516), Expect = 5.850e-58
Identity = 108/291 (37.11%), Postives = 170/291 (58.42%), Query Frame = 1
Query:  166 EALRHSFTIGLSGGGATVFSVATMMWLHTIITYQQRHGTKFGETCKILWRQGGPRRFYRGVLPSLASAPLCRFGDTLSNELAMVWFHGQQXXXXXXXXNGTTISGGRGDNTKLPVWVATFLGSMGAAAFHAVVVPLDTYKVIMQVDGKEGLAVMKKRIATRGPVAVYDGALAFAGGSLMGHYPWYLTYNLLEQSLPRTRKGEGRSRKARSAFIGAAASIVSAAASNAFRVLKVYRQSHDRPDGLSYAKSIKQIIKKDGGGTRGVLGVFGRGLGGRVAASSLQGLVFNMIWQ 1038
            ++L+ +   G +G  A   +V T+MW+ T I YQ RHG    +  + L+ QGG  RFYRGV P+L   P+ RFGDT +N   +      +                      LPV   T   S+ AA +   ++P+DT K IMQV+GKEG   + K++   GP  +Y GALA +  +L+GHYPW+ TYN L++ +P+  +  G  + AR+  IG  +S+VS   SN+ RV+KVY+QSH   +G++Y ++++ +I KDG     ++G+FGRGL  ++ A+ +QGL+F+++W+
Sbjct:   18 KSLKRALGGGFAGALAMGINVGTLMWMRTTINYQLRHGGGTMDAFRTLYSQGGIGRFYRGVGPALIQGPMSRFGDTAANTGVLALMESYE------------------STKNLPVGAKTLCASVAAALWRIFLMPVDTTKTIMQVEGKEGFPALVKKVKVGGPTVLYHGALAASSATLVGHYPWFFTYNYLQERIPK--QDSGIKKLARNGIIGFCSSVVSDTCSNSIRVVKVYKQSHT--EGVTYVQAVRDVIAKDG-----LVGLFGRGLKTKIMANGMQGLMFSVLWK 281          
BLAST of mRNA_Ecto-sp6_S_contig10.601.1 vs. uniprot
Match: A0A0L0FNE2_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FNE2_9EUKA)

HSP 1 Score: 199 bits (507), Expect = 6.820e-57
Identity = 108/292 (36.99%), Postives = 172/292 (58.90%), Query Frame = 1
Query:  193 GLSGGGATVFSVATMMWLHTIITYQQRHGTKFGETCKILWRQGGPRRFYRGVLPSLASAPLCRFGDTLSNELAMVWFHGQQXXXXXXXXNGTTISGGRGDNTKLPVWVATFLGSMGAAAFHAVVVPLDTYKVIMQVDGKEGLAVMKKRIATRGPVAVYDGALAFAGGSLMGHYPWYLTYNLLEQSLPRTRKGEGRSRKARSAFIGAAASIVSAAASNAFRVLKVYRQSHDRPDGLSYAKSIKQIIKKDGGGTRGVLGVFGRGLGGRVAASSLQGLVFNMIWQEMAAWSNDER 1068
            G+ G  A   +V ++MWL T + YQ R+GT   E  K L+++GG RRFYRG  P+L   PL RFGDT +N   +                 TT        + LPV V T   S  AA +   ++P+DT K  MQV+G +G++ ++ ++++ GP  +Y GA+A +G + +GHYPW+  YNLL++ LP+  K E   +  R+A IG  AS+VS   SN+ RV+K  +Q+      +SY +++K +IK+DG     ++G+FGRGL  R+ A+++QG++F+++W+ +    N +R
Sbjct:   33 GVPGAVAMGINVTSLMWLRTTMNYQYRYGTSTTEAFKHLYKEGGIRRFYRGYGPALFQGPLSRFGDTAANAGVLALLDSYD----------TT--------SNLPVGVKTIFASAAAATWRVFLMPVDTLKTTMQVEGAKGVSQLRGKLSSGGPKVLYSGAIAASGATFVGHYPWFFVYNLLQEKLPKAEKDETLKKLGRNAVIGFCASVVSDTCSNSIRVVKTTKQT--AAVQMSYPETVKMVIKQDG-----LIGLFGRGLKTRILANAMQGMLFSVLWKALEEQWNKDR 299          
BLAST of mRNA_Ecto-sp6_S_contig10.601.1 vs. uniprot
Match: A0CUY1_PARTE (Uncharacterized protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0CUY1_PARTE)

HSP 1 Score: 198 bits (503), Expect = 2.510e-56
Identity = 109/297 (36.70%), Postives = 168/297 (56.57%), Query Frame = 1
Query:  148 PAVTAREALRHSFTIGLSGGGATVFSVATMMWLHTIITYQQRHGTKFGETCKILWRQGGPRRFYRGVLPSLASAPLCRFGDTLSNELAMVWFHGQQXXXXXXXXNGTTISGGRGDNTKLPVWVATFLGSMGAAAFHAVVVPLDTYKVIMQVDGKEGLAVMKKRIATRGPVAVYDGALAFAGGSLMGHYPWYLTYNLLEQSLPRTRKGEGRSRKARSAFIGAAASIVSAAASNAFRVLKVYRQSHDRPDGLSYAKSIKQIIKKDGGGTRGVLGVFGRGLGGRVAASSLQGLVFNMIWQ 1038
            P    +E    +F  GLSG  A    V ++MWL T + YQ R+G     T K L+ +GG  RFY+G+ P+L   PL RFGDT +N L +                  T+         LPV +    GS+ A  F   + P+DT K I+QV+GK GL +++ +I  +G  A+Y GALA A  +++GHYPW+ T+NLL + LP     + + + AR AFIG  +S++S + SN+ RV+K  +Q+   P  ++Y +++  +++KDG     V G+FGRGL  R+  + LQGL+F+++W+
Sbjct:   15 PTFNFKEVASKAFRSGLSGSMAMAIQVCSLMWLRTTMNYQYRYGGTIVGTLKHLYSEGGILRFYKGLAPALLQGPLSRFGDTFANTLFL------------------TLMDSFESTRNLPVMIRAAGGSVMAGVFRIALTPIDTVKTILQVEGKNGLTILQSKIKVKGVPALYHGALATASATIVGHYPWFATFNLLNEKLPDYT--DKKKKLARRAFIGFCSSVISDSISNSLRVIKTTKQTSQNP--ITYKEAVNLVLEKDG-----VKGLFGRGLKTRILTNGLQGLIFSVLWK 284          
BLAST of mRNA_Ecto-sp6_S_contig10.601.1 vs. uniprot
Match: A0A2K3CTE6_CHLRE (Uncharacterized protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3CTE6_CHLRE)

HSP 1 Score: 199 bits (505), Expect = 5.460e-56
Identity = 109/287 (37.98%), Postives = 163/287 (56.79%), Query Frame = 1
Query:  193 GLSGGGATVFSVATMMWLHTIITYQQRHGTKFGETCKILWRQGGPRRFYRGVLPSLASAPLCRFGDTLSNELAMVWFHGQQXXXXXXXXNGTTISGGRGDNTKLPVWVATFLGSMGAAAFHAVVVPLDTYKVIMQVDGKEGLAVMKKRIATRGPVAVYDGALAFAGGSLMGHYPWYLTYNLLEQSLPRTRKGEGRSRKARSAFIGAAASIVSAAASNAFRVLKVYRQSHDRPDGLSYAKSIKQIIKKDGGGTRGVLGVFGRGLGGRVAASSLQGLVFNMIWQEMAAW 1053
            GL G  A    V ++MWL T I YQ R+GT      + L+++GG RRFYRG+LP++   PL RFGDT +N   +                  ++         LPV V T + S  A  F  +++P+DT K IMQV+GK+ +A + +++AT GP  +Y GALA A  + +GHYPW+ TYN L   LP+    + +++  RSA +G  +S VS   SN+ RV+K  +Q+   P  +SY +  + II+KDG     VLG+ GRGL  ++ A+ LQG+ F+++W+    W
Sbjct:   43 GLPGMAAMATQVLSLMWLRTTINYQYRYGTDTTTALRTLYKEGGVRRFYRGLLPAMVQGPLSRFGDTAANAGTL------------------SLLDAYPSTAGLPVGVKTLVASTAAGCFRVLLMPVDTVKTIMQVEGKDAVAALWRKVATGGPGVLYHGALASAAATFVGHYPWFATYNYLNAVLPKAPADDLKAKLGRSAIMGFCSSFVSDCCSNSIRVIKTTKQTTREP--MSYPQVARMIIEKDG-----VLGLMGRGLKTKIIANGLQGICFSIVWRMGQDW 304          
BLAST of mRNA_Ecto-sp6_S_contig10.601.1 vs. uniprot
Match: A0A836B9G0_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836B9G0_9CHLO)

HSP 1 Score: 195 bits (496), Expect = 9.250e-55
Identity = 113/297 (38.05%), Postives = 164/297 (55.22%), Query Frame = 1
Query:  163 REALRHSFTIGLSGGGATVFSVATMMWLHTIITYQQRHGTKFGETCKILWRQGGPRRFYRGVLPSLASAPLCRFGDTLSNELAMVWFHGQQXXXXXXXXNGTTISGGRGDNTKLPVWVATFLGSMGAAAFHAVVVPLDTYKVIMQVDGKEGLAVMKKRIATRGPVAVYDGALAFAGGSLMGHYPWYLTYNLLEQSLPRTRKGEGRSRKARSAFIGAAASIVSAAASNAFRVLKVYRQSHDRPDGLSYAKSIKQIIKKDGGGTRGVLGVFGRGLGGRVAASSLQGLVFNMIWQEMAAW 1053
            R+A   +   GL G  A    V ++MWL T I YQ R+GT      + L+++GG RRFYRG+LP++   PL RFGDT +N   +                GT           LPV V T   S  A AF   ++P+DT K IMQV+GK+ +A + +++AT GP  +Y GALA A  + +GHYPW+ TYN L   LP   +G+   +  RSA +G  +S VS   SN+ RV+K  +Q+   P  ++Y +  + II+KDG     VLG+ GRGL  ++ A+ +QG+ F ++W+    W
Sbjct:   23 RDAGNKALGGGLPGMVAMATQVLSLMWLRTTINYQYRYGTDTTTALRTLYKEGGVRRFYRGLLPAMVQGPLSRFGDTAANAGTLALLDAYP---------GTA---------SLPVGVKTLAASGAAGAFRVFLMPVDTVKTIMQVEGKDAVAALWRKVATGGPGVLYHGALASAAATFVGHYPWFATYNYLNSVLPAAPEGDLGRKLGRSAVMGFCSSFVSDCCSNSIRVIKTTKQTTREP--MTYPQVAQMIIEKDG-----VLGLMGRGLKTKIIANGMQGICFTIVWRMGQDW 294          
BLAST of mRNA_Ecto-sp6_S_contig10.601.1 vs. uniprot
Match: A0A4D9D3X0_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3X0_9STRA)

HSP 1 Score: 192 bits (489), Expect = 3.350e-54
Identity = 106/282 (37.59%), Postives = 166/282 (58.87%), Query Frame = 1
Query:  193 GLSGGGATVFSVATMMWLHTIITYQQRHGTKFGETCKILWRQGGPRRFYRGVLPSLASAPLCRFGDTLSNELAMVWFHGQQXXXXXXXXNGTTISGGRGDNTKLPVWVATFLGSMGAAAFHAVVVPLDTYKVIMQVDGKEGLAVMKKRIATRGPVAVYDGALAFAGGSLMGHYPWYLTYNLLEQSLPRTRKGEGRSRKARSAFIGAAASIVSAAASNAFRVLKVYRQSHDRPDGLSYAKSIKQIIKKDGGGTRGVLGVFGRGLGGRVAASSLQGLVFNMIWQ 1038
            G+SG  A   +V  +MWL T + YQ R+GT      K L+  GG  RFY+G+LP+L   P  RFGDT +N   +                  T+     +   LPV V T   S  AA++   ++P+DT K I QV+GK+G  V+  ++ T GP  +Y GALA    +L+GHYPW+ TYN L+++LP+T   + + +  R+A IG ++S +S   SN+ RV+KVY+Q++   + ++Y  ++++II  DG     ++G+FGRGL  ++ A+ LQGLVF+++W+
Sbjct:   36 GISGAAAMGINVGALMWLRTTVNYQYRNGTTMRVALKTLYADGGIPRFYQGLLPALVQGPASRFGDTAANAGVI------------------TLLDSFDETKDLPVLVKTAAASATAASWRIFLMPVDTLKTIKQVEGKDGFKVLMAKMKTHGPGVMYHGALAAFAANLLGHYPWFATYNYLQENLPKT--DDFKMKLCRNALIGFSSSAISDTVSNSVRVVKVYKQANS--EHIAYPDAVRRIIAADG-----LVGLFGRGLSTKIFANGLQGLVFSVLWK 290          
BLAST of mRNA_Ecto-sp6_S_contig10.601.1 vs. uniprot
Match: A0A553NZG9_TIGCA (Uncharacterized protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553NZG9_TIGCA)

HSP 1 Score: 191 bits (485), Expect = 8.710e-54
Identity = 105/292 (35.96%), Postives = 169/292 (57.88%), Query Frame = 1
Query:  163 REALRHSFTIGLSGGGATVFSVATMMWLHTIITYQQRHGTKFGETCKILWRQGGPRRFYRGVLPSLASAPLCRFGDTLSNELAMVWFHGQQXXXXXXXXNGTTISGGRGDNTKLPVWVATFLGSMGAAAFHAVVVPLDTYKVIMQVDGKEGLAVMKKRIATRGPVAVYDGALAFAGGSLMGHYPWYLTYNLLEQSLPRTRKGEGRSRKARSAFIGAAASIVSAAASNAFRVLKVYRQSHDRPDGLSYAKSIKQIIKKDGGGTRGVLGVFGRGLGGRVAASSLQGLVFNMIWQ 1038
            R AL  +   G SG  A      TMMW+ T + YQ R+GT   +  + L++QGG RRFYRG+ P+L   P+ RFGDT +N     +                        ++ LPV + TF  S  A  +  +++P+D  K  +QV+G++G+A++ K+I  RGP  ++ GALA A  + +GH+PW++T+N L++++P      G     R+A IG  +S+VS   SN+ RV+K  RQ++   + ++Y + ++ +IK+DG     VLG+FGRGL  R+ A+ LQGLVF+++++
Sbjct:   18 RAALEKAVQGGKSGAMAMTIQCCTMMWIRTTMNYQYRYGTTTTQAMRTLYQQGGIRRFYRGLAPALFQGPISRFGDTAANAGVNAYLK----------------------DSDLPVALRTFCASTAAGGWRIMIMPIDCLKTTLQVEGRDGVALLGKKIKARGPFVLWHGALAAASATAVGHFPWFVTFNYLQETIPLAESTVGNF--GRNAGIGFCSSVVSDTISNSLRVIKTTRQTYS--EAVTYPEVVRHVIKEDG-----VLGLFGRGLKTRLLANGLQGLVFSVLYK 278          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.601.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVK5_ECTSI1.540e-23096.94Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZPC0_9STRA2.930e-6140.73Mitochondrial carrier domain-containing protein n=... [more]
A0A7R9YEQ5_9STRA3.320e-5838.01Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
D8LEK6_ECTSI5.850e-5837.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A0L0FNE2_9EUKA6.820e-5736.99Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
A0CUY1_PARTE2.510e-5636.70Uncharacterized protein n=1 Tax=Paramecium tetraur... [more]
A0A2K3CTE6_CHLRE5.460e-5637.98Uncharacterized protein n=3 Tax=Chlamydomonas TaxI... [more]
A0A836B9G0_9CHLO9.250e-5538.05Uncharacterized protein n=1 Tax=Chlamydomonas schl... [more]
A0A4D9D3X0_9STRA3.350e-5437.59Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A553NZG9_TIGCA8.710e-5435.96Uncharacterized protein n=1 Tax=Tigriopus californ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:1905010..1910112 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score650.2
Seed ortholog evalue5.6e-184
Seed eggNOG ortholog2880.D7FVK5
Model size1408
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.Mitochondrial carrier protein
EggNOG OGs28MPG@1,2QU7F@2759
Ec32 ortholog descriptionMitochondrial carrier domain
Ec32 orthologEc-15_003640.1
Cds size1071
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.601.1prot_Ecto-sp6_S_contig10.601.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig10 1905010..1909775 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348712.2459269-CDS-Ecto-sp6_S_contig10:1905009..19053121682348712.2459269-CDS-Ecto-sp6_S_contig10:1905009..1905312Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1905010..1905312 +
1682348712.265119-CDS-Ecto-sp6_S_contig10:1906526..19068081682348712.265119-CDS-Ecto-sp6_S_contig10:1906526..1906808Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1906527..1906808 +
1682348712.2739112-CDS-Ecto-sp6_S_contig10:1907657..19077881682348712.2739112-CDS-Ecto-sp6_S_contig10:1907657..1907788Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1907658..1907788 +
1682348712.2813916-CDS-Ecto-sp6_S_contig10:1908452..19086051682348712.2813916-CDS-Ecto-sp6_S_contig10:1908452..1908605Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1908453..1908605 +
1682348712.2888355-CDS-Ecto-sp6_S_contig10:1909192..19093341682348712.2888355-CDS-Ecto-sp6_S_contig10:1909192..1909334Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1909193..1909334 +
1682348712.2965047-CDS-Ecto-sp6_S_contig10:1909715..19097751682348712.2965047-CDS-Ecto-sp6_S_contig10:1909715..1909775Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1909716..1909775 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348712.303727-UTR-Ecto-sp6_S_contig10:1909775..19101121682348712.303727-UTR-Ecto-sp6_S_contig10:1909775..1910112Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig10 1909776..1910112 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig10.601.1

>prot_Ecto-sp6_S_contig10.601.1 ID=prot_Ecto-sp6_S_contig10.601.1|Name=mRNA_Ecto-sp6_S_contig10.601.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=357bp
MTAAPAITAQLNAAAAAATQQDGAEVFQVDNVDSEVEQPDAPAAAVAPAP
AVTAREALRHSFTIGLSGGGATVFSVATMMWLHTIITYQQRHGTKFGETC
KILWRQGGPRRFYRGVLPSLASAPLCRFGDTLSNELAMVWFHGQQQRRSS
GGGNGTTISGGRGDNTKLPVWVATFLGSMGAAAFHAVVVPLDTYKVIMQV
DGKEGLAVMKKRIATRGPVAVYDGALAFAGGSLMGHYPWYLTYNLLEQSL
PRTRKGEGRSRKARSAFIGAAASIVSAAASNAFRVLKVYRQSHDRPDGLS
YAKSIKQIIKKDGGGTRGVLGVFGRGLGGRVAASSLQGLVFNMIWQEMAA
WSNDER*
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mRNA from alignment at Ecto-sp6_S_contig10:1905010..1910112+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig10.601.1 ID=mRNA_Ecto-sp6_S_contig10.601.1|Name=mRNA_Ecto-sp6_S_contig10.601.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5103bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:1905010..1910112+ (Ectocarpus species6 EcLAC_371)
ATGACGGCAGCACCAGCGATTACGGCCCAGTTGAATGCAGCAGCAGCAGC AGCAACCCAACAAGATGGAGCAGAAGTGTTTCAGGTCGACAACGTCGATT CCGAGGTTGAACAACCCGACGCCCCCGCAGCAGCAGTAGCACCAGCGCCT GCGGTGACCGCGAGAGAGGCCCTCCGGCACAGCTTTACCATCGGGCTCTC CGGGGGTGGAGCCACCGTCTTCAGCGTGGCCACCATGATGTGGCTCCACA CCATCATCACATACCAGCAGCGCCACGGCACAAAGTTCGGGGAAACATGC AAGGTATGCTATGCATATGTGTGATGACGGAGTACACGTCATGGCGACAT GTACGGCCGCTTGCTAATGTCGAATGTCAGATGCGAGCCACATCTATTGC AGTTGGACACGCAGGGAGGTGTAAGCAGCAAGCAGCATCCATGAGACTCC GTCGCTGTAGTGAGAGGCAGGGGGGTTGGTGGCCCCGTTCAATCCAAGCG GCGCTGGCAGACCCCGCTTATGGTCTTCGTGATGAGCGTAAACACCGACG TTTGTATCGACAGCAGCGGCAGAATCAAACCATGTATTTTTGCTGCATCG TAGGTCGTCATACATCGGGCAACGTTAGCAGCAATACGAGCTTTGCTCGC TACAATACATGGTGTATTTTGTGATTGTCTTTCTTTCATCTTGCATGGAT CATGTGGCACATGTGCACACAGCATGACCGAGACCCAACCAACGGGGTGA CGGAGACTTGCCAGGCCTACTCTTGTCTCTCTCTTGGTGTATACAGCACT AATATCGAATACCCAATCCTGCAAACCAATGACGAAGAGTTCAGCGGCCG GAGCGAAACGAACAACACAACAAGACGATTTCCTTTCCCCATGTTTTCGG TTACGGAGGGTGAATCCCTGAGACGTCTCCGTCAGAGCATTAACTGAAGT GGATTGAAGGTAACCACCGTTCCCTTTTTCGCAACGCAAGAGAACCCCGT AGAAATGTCGACGCCGGGAATCGACCACCTCGAAGGGTTGTTTGTTTTAC ACATAGTATATAGGTTAACGGGCCAATCGCTTCAAGCTCTCAGTCAACGC TGACGGAGCGGTCTCAGAGAATACCCCCTAAAACTATCACGGTGCGCCTG TTTTTTCCTACTTGACCATCGATTGTACCTGTGAGCTAAGTAGCAGGCTT GGCCGTAGGAACGTCGGAAGTCGAAGCACGTGTGTGTTTCTTTCAATTAG AATCGGCCGCGCTGATGAGCTAGGCAACGAAAATAAATTTTGCGCGCGCA CAGATGCGTACCCCGGATTTCGCATCGTTGCCGAGCTTTTTTCGGTACAA TTGTAGAAACATCTCTTAAGCACCAGCACAACTGCGCGGAGAGATCTTCC GTGCAACGTCGTTCACCCTTCTTTACGTTCACCTCGCGTGTTGTGTCTGA TTGCCGCCTGTCCCAATCGTCAAACAAAAATAAAACGACAACGACGGCGG ACGGCCGGTGCGAACAGATACTGTGGCGACAGGGCGGGCCGCGACGATTC TACCGCGGCGTGCTGCCGTCCCTGGCGTCGGCGCCTCTCTGCAGGTTCGG TGACACCCTCAGCAACGAGCTGGCGATGGTTTGGTTCCACGGGCAGCAAC AGAGAAGAAGCTCGGGAGGGGGAAACGGCACCACAATAAGCGGGGGGCGG GGAGACAACACCAAACTGCCGGTGTGGGTGGCGACGTTTTTGGGGTCGAT GGGAGCGGCGGCGTTCCACGCGGTGGTTGTACCGTTGGATACCTACAAGG TGTGTGAGGCTTGGGCGCAATCGCTGTTTTTGTTTATTTTTCGTGGTTGA TTTAAGGGTCCCTCCTCTCCGTTTCGACCTACCCCCACGATAGCGTTGGC TATAGAGTGTTTTTTTTAGAGCGCTCCGCGCGGCGAGATTTGTTCAACCT CCGAACCGTGAGTTTCGGTGGTGCTGTGCGGGGTATGTAGTGCTTGGTCG CTACAAATACAATGCCCAAGAACAGTGAAAAGGCACCTCGAAACTCTTTC CTGGTTTGGCGTGCCGAAGGGGTTGCACAAATACGTTGATCCAACGCTCG CCTGATCGACCTTAATCGATAGGCTAGATGGCGTCGTCCCATCAGGCACT AGACTAGAGTGCCGCTTTTGCTCTTCCAAGAAAAAGACCACGGGATAGAG GTCCGTCATCACGTGCCACAGGAGCTGCCCCCACCCCGTTGTTTTCCCCA AAGTATCGCTCGTTGCCGTCTCCCCTTGGGGGGACAGCGGCAAGGAAGCT GTATGCGCTAGTGTTGAGTTTGTGGTCCTATGCCCGTTATCGTGTTTGGA CCCCTTCCTTTTAGCCTGAAGTTCTCAACTGACTGACAGTGAAGCGTGCC AAGGGGGTGGCGACTGTTAATTCGAGATACGAACCGCAAGTGTCGTGAAC AGTTCCTCAGCTTTCCTCCAGGTTATCTGCGAAATGAGAATCTTCGAATG GTCTTCCTCCGTATGACTCCTTCGGGTTGTCACGCTGAATGAGCCTGTGG CTTGACGGTTTTTTTTTCGCTTTTTCCGCATGTTAACTCATTTTTTCGAC CAAAGTCAACGCGTAAAATGAGGCGTTCTTCCTCCCTCCCTTCTCCAGGT AATCATGCAGGTGGACGGAAAGGAGGGTCTGGCCGTGATGAAGAAGCGAA TAGCGACGCGCGGCCCAGTCGCGGTCTACGACGGGGCGCTGGCGTTCGCG GGGGGGTCGCTGATGGGGCACTACCCTTGGTGAGCCTTTTCTCCTTGTTT TTTCCTTTCGTGAAGACTATGAACGCCGAGCGCGGGACGAACGTTCCGCA CCTGAGATATGAGGAATGTCGTCTCGAGCACCCCGTTCGGCACATCGTCT CCCCGCCGTCGAGTACAGACTGTTTCATACCGGGAGACACTGACAAAAGT TGGGGCCAAGATGTGTGATCCTTTTTTTGGTGCGCCTTCTCTTTTTTTGT TTCTTGGCGATCCTATCTCTTTTCCCAGGAGAGTTCGCTTTATACTAAAA CATGCATGTTAGAATATACATGTTACATTTTTCTGGACAGCGGCACAGTT CTGGCGGTGCCTGGATGGCAGGCTTGCTGTGGAGTAGGCCCGTGTTGCGT TAATTTGAGGCTTATTTGCCCGGGTGGACGCGTTTCACACCCGATATGGA AACCAGCGATTAAGCCAAACTGTATTTGAAGGTATCAGATGTTTTCTAGA CCTCGTGATGCTGTGCTTCTCATGACACCGGGACCGGCCACTGCTGCATT CTATACGCGACGGAAGATTTAGCATGCTTTTGTTTGTTTTCCTGGTTTCG AACCTACCCAAGCTATCGATGCTTGCTCTGGCGCACCGCTCAACCGATTT GTTGTTGTCCACGTTCCTTCCTGTCTTTATTTCTTGGAAATAGGTACTTG ACGTACAACTTGTTGGAGCAGAGCCTTCCAAGAACAAGGAAAGGCGAGGG GAGGAGCCGGAAAGCTCGGAGCGCCTTCATTGGTGCGGCGGCATCGATAG TCTCGGCGGCGGCGTCGAACGCTTTTCGCGTCCTCAAGGTTTACAGGTGG GGGCTTTTGGTTGGTCTCGGGCATTGCGTCACCCAGAACTGAAAAATGAG AGACACTCGCACAAACTTTGTCATTGATCAGCCGGTTGGCGCGGCCAAAG CTAGTGAATAAAACGAGCGAAGCGAAACACATGCATGGTCATTGTTGGTC GAATGAATATACAAGTTCTCTTTTCTGACTTCAACAGACTCAAGATATGC CCATTGTCCCGCAGTTTCCCCCCCCCTCACTGCGAAGACTCTCAACACAT CCCCTTAGACTGTTGAGGTATTTCATTGTAAGCGCACGTGGGATCTGAGT CGACCAGGATGTATGTTAATTGCGATGTCCAAGGTGACAAGCAATCAAGG GCGACAACCGTTCAATTCGAGCTCTCACGGAAGCGTGGCATGAACTGCTG TATGTATTTGCGCGTGTGGGATTATTATCATTTTGACTTGAGAACCAAAC AGTTATGCAGCACACCCTAACAAACCCTCAGCATCGGTTTCGAACTCGGA AGCTCTTCACGGGCGCCTTCGTCTTTCGCGTTGCTCATGTACCCCCCCCG TTGCAATGATGGTGACACACACGGTGCCCCCAGGCAATCGCACGACCGGC CGGATGGACTGTCGTACGCGAAGTCGATCAAGCAGATCATCAAGAAGGAC GGGGGGGGCACGCGAGGGGTGCTGGGGGTGTTTGGGAGGGGGCTGGGAGG AAGGGTGGCGGCGTCTTCGTTGCAGGTAAGGACGCTTGTTTTTTTATTCT TTTTGCAGACGTAGGACATGTAGACTTGCGAGGGTTGTGGGCTGGTCAAT GGTAGTCACATGTTGCTTAGGTACGTATATATATATCTATGGTTTTGATG ATATTTAAGATGCTTTATGTTGGGCTCTCGTGCGTCACTCTCTCGTCGGT TTCTACGGAGAATTAAAGGACTTTTGTGTGTGATCACTCAAGCCTACCAT CAGCTCCTCGTTGGGATGTAGTCCATGGACATGACCAATTGCCAATCCTG GCAAAGTCTAAAAGGAGTATATTTCATGATTGATAACTAATGATTGAGCG AGATCTGACTGGGTTTTTCCATCCCGCGCTGTGCTGCTGCGCGCTGCCTC CCGAAGGGACTGGTGTTCAACATGATTTGGCAGGAAATGGCCGCTTGGAG CAACGACGAGAGATGACATCATCATCCACACCCAGCCTCCGCCGCGATAG AGCACGAGCGGCTTGGTCGCCTCGCGCACCCAACTAATTAGACCGCTGCC CCGAGAGTGAGGCAGATTTTGTTTCAATTTTTCTCCTTCCCGTCGGCTGC AAGACTAGAGGAAGAAGATTTTCCGCGCTTGTTCAGAAACGCTGGAGGTT TAGAGACCTGGGCAACGGTAGTTTTTGTTAGACAGCAGGGACAACGGGCG TTGCGTGAGTGTGTGAGAGTGAGTATGCTGCCTTTTCGGTTTGTGTTGCT GGGAGAGTTGTTGTTACTGTTCTATCCGCAATTTTGGAAATCGCGGGAAG GGG
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig10:1905010..1910112+

>mRNA_Ecto-sp6_S_contig10.601.1 ID=mRNA_Ecto-sp6_S_contig10.601.1|Name=mRNA_Ecto-sp6_S_contig10.601.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1071bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:1905010..1910112+ (Ectocarpus species6 EcLAC_371)
ATGACGGCAGCACCAGCGATTACGGCCCAGTTGAATGCAGCAGCAGCAGC
AGCAACCCAACAAGATGGAGCAGAAGTGTTTCAGGTCGACAACGTCGATT
CCGAGGTTGAACAACCCGACGCCCCCGCAGCAGCAGTAGCACCAGCGCCT
GCGGTGACCGCGAGAGAGGCCCTCCGGCACAGCTTTACCATCGGGCTCTC
CGGGGGTGGAGCCACCGTCTTCAGCGTGGCCACCATGATGTGGCTCCACA
CCATCATCACATACCAGCAGCGCCACGGCACAAAGTTCGGGGAAACATGC
AAGATACTGTGGCGACAGGGCGGGCCGCGACGATTCTACCGCGGCGTGCT
GCCGTCCCTGGCGTCGGCGCCTCTCTGCAGGTTCGGTGACACCCTCAGCA
ACGAGCTGGCGATGGTTTGGTTCCACGGGCAGCAACAGAGAAGAAGCTCG
GGAGGGGGAAACGGCACCACAATAAGCGGGGGGCGGGGAGACAACACCAA
ACTGCCGGTGTGGGTGGCGACGTTTTTGGGGTCGATGGGAGCGGCGGCGT
TCCACGCGGTGGTTGTACCGTTGGATACCTACAAGGTAATCATGCAGGTG
GACGGAAAGGAGGGTCTGGCCGTGATGAAGAAGCGAATAGCGACGCGCGG
CCCAGTCGCGGTCTACGACGGGGCGCTGGCGTTCGCGGGGGGGTCGCTGA
TGGGGCACTACCCTTGGTACTTGACGTACAACTTGTTGGAGCAGAGCCTT
CCAAGAACAAGGAAAGGCGAGGGGAGGAGCCGGAAAGCTCGGAGCGCCTT
CATTGGTGCGGCGGCATCGATAGTCTCGGCGGCGGCGTCGAACGCTTTTC
GCGTCCTCAAGGTTTACAGGCAATCGCACGACCGGCCGGATGGACTGTCG
TACGCGAAGTCGATCAAGCAGATCATCAAGAAGGACGGGGGGGGCACGCG
AGGGGTGCTGGGGGTGTTTGGGAGGGGGCTGGGAGGAAGGGTGGCGGCGT
CTTCGTTGCAGGGACTGGTGTTCAACATGATTTGGCAGGAAATGGCCGCT
TGGAGCAACGACGAGAGATGA
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