mRNA_Ecto-sp6_S_contig10.558.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.558.1 vs. uniprot
Match: A0A6H5L0K3_9PHAE (Serine/threonine-protein phosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0K3_9PHAE) HSP 1 Score: 274 bits (700), Expect = 2.150e-83 Identity = 131/134 (97.76%), Postives = 133/134 (99.25%), Query Frame = 1 Query: 1 RGLYSCEVALYLVSLKLAFPREVHLIRGNHETANQTATCGFKDECSAKYGSRIYDAFLECFSALPVCAILSQKGQLESLFCVHGGISPRLKTVNDIRRLERRVEPEEGTLLADLLWSDPSDDPSVVRRAALGDC 402 RGLYSCEVALYL+SLKLAFPREVHLIRGNHETANQTA CGFKDECSAKYGSRIYDAFLECFSALPVCAILSQKGQLESLFCVHGGISPRLKTVNDIRRLERRVEP+EGTLLADLLWSDPSDDPSVVRRAALGDC Sbjct: 494 RGLYSCEVALYLISLKLAFPREVHLIRGNHETANQTAACGFKDECSAKYGSRIYDAFLECFSALPVCAILSQKGQLESLFCVHGGISPRLKTVNDIRRLERRVEPQEGTLLADLLWSDPSDDPSVVRRAALGDC 627
BLAST of mRNA_Ecto-sp6_S_contig10.558.1 vs. uniprot
Match: D7FN84_ECTSI (Serine/threonine-protein phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN84_ECTSI) HSP 1 Score: 258 bits (659), Expect = 5.160e-83 Identity = 124/126 (98.41%), Postives = 125/126 (99.21%), Query Frame = 1 Query: 1 RGLYSCEVALYLVSLKLAFPREVHLIRGNHETANQTATCGFKDECSAKYGSRIYDAFLECFSALPVCAILSQKGQLESLFCVHGGISPRLKTVNDIRRLERRVEPEEGTLLADLLWSDPSDDPSVV 378 RGLYSCEVALYLVSLKLAFPREVHLIRGNHETANQTATCGFKDECSAKYGSRIYDAFLECFSALPVCAILSQKGQLESLFCVHGGISPRLKTVNDIRRLERRVEPEEGTLLADLLWSDPSDDPS+ Sbjct: 277 RGLYSCEVALYLVSLKLAFPREVHLIRGNHETANQTATCGFKDECSAKYGSRIYDAFLECFSALPVCAILSQKGQLESLFCVHGGISPRLKTVNDIRRLERRVEPEEGTLLADLLWSDPSDDPSLT 402
BLAST of mRNA_Ecto-sp6_S_contig10.558.1 vs. uniprot
Match: A0A835Z1Z6_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Z6_9STRA) HSP 1 Score: 137 bits (346), Expect = 3.480e-37 Identity = 64/123 (52.03%), Postives = 83/123 (67.48%), Query Frame = 1 Query: 1 RGLYSCEVALYLVSLKLAFPREVHLIRGNHETANQTATCGFKDECSAKYGSRIYDAFLECFSALPVCAILSQKGQLESLFCVHGGISPRLKTVNDIRRLERRVEPEEGTLLADLLWSDPSDDP 369 RG YSCEV LYL+SLKLA+P+ VHL+RGNHE + T GFK EC AKYG +Y FL F LP+CA+++ + C HGG+SP L ++ ++ L+RR EP L DLLW+DP+DDP Sbjct: 64 RGAYSCEVMLYLLSLKLAYPKHVHLLRGNHECRSLTGHFGFKAECKAKYGLPVYYRFLRLFEELPLCAVVTS--DVGRYLCAHGGLSPDLASIEEVDALQRRGEPPMSGPLCDLLWADPADDP 184
BLAST of mRNA_Ecto-sp6_S_contig10.558.1 vs. uniprot
Match: A0A835YV28_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV28_9STRA) HSP 1 Score: 132 bits (333), Expect = 5.350e-35 Identity = 65/130 (50.00%), Postives = 81/130 (62.31%), Query Frame = 1 Query: 1 RGLYSCEVALYLVSLKLAFPREVHLIRGNHETANQTATCGFKDECSAKYGSRIYDAFLECFSALPVCAILSQKGQLESLFCVHGGISPRLKTVNDIRRLERRVEPEEGTLLADLLWSDPSDDPSVVRRAA 390 RG YSCEV LYL++LKLA P VHL+RGNHE T GFK+EC KYG +Y F+ F LP+ A+++ C HGG+SP L T++ + L+RR EP L DLLW+DPSDDPS AA Sbjct: 102 RGAYSCEVMLYLLALKLAHPDHVHLLRGNHECRALTGHFGFKEECKGKYGLPVYYRFVRVFEELPLAALVTNDHG--RYLCAHGGLSPELATIDAVDALDRRTEPPMDGPLCDLLWADPSDDPSTCPPAA 229
BLAST of mRNA_Ecto-sp6_S_contig10.558.1 vs. uniprot
Match: H3G693_PHYRM (Serine/threonine-protein phosphatase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G693_PHYRM) HSP 1 Score: 130 bits (326), Expect = 7.340e-35 Identity = 66/133 (49.62%), Postives = 87/133 (65.41%), Query Frame = 1 Query: 1 RGLYSCEVALYLVSLKLAFPREVHLIRGNHETANQTATCGFKDECSAKYGSRIYDAFLECFSALPVCAILS-QKGQLESLFCVHGGISPRLKTVNDIRRLERRVEPEEGTLLADLLWSDPSDDPSVVRRAALG 396 RG +SCEV LYL+ LK+ F +V L+RGNHE + ++ GF+ EC KYG +Y FL CF A+PV AILS +G++ CVHGGISP LKT+ DI++++RR E +L DLLWSDP V A +G Sbjct: 40 RGAFSCEVMLYLLLLKIRFSDKVVLLRGNHECESISSFYGFRSECRVKYGISVYYHFLSCFQAMPVAAILSTSRGRI---MCVHGGISPELKTIEDIQKIDRRREVPTTGILCDLLWSDPQTPHGVQVDAEVG 169
BLAST of mRNA_Ecto-sp6_S_contig10.558.1 vs. uniprot
Match: A0A7S3H896_9STRA (Serine/threonine-protein phosphatase (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H896_9STRA) HSP 1 Score: 127 bits (319), Expect = 7.960e-35 Identity = 59/125 (47.20%), Postives = 83/125 (66.40%), Query Frame = 1 Query: 1 RGLYSCEVALYLVSLKLAFPREVHLIRGNHETANQTATCGFKDECSAKYGSRIYDAFLECFSALPVCAILSQKGQLESLFCVHGGISPRLKTVNDIRRLERRVEPEEGTLLADLLWSDPSDDPSV 375 RG YSCEV LYL++LK+A+P ++ L+RGNHE A+ + GFK+EC KYG IY +FL F +P+ AI+S ++ HGG+SP L+T+ I L+R +EPE L D+LW+DP D +V Sbjct: 37 RGQYSCEVMLYLLALKVAYPEKIWLVRGNHECASVSGHFGFKEECKVKYGMNIYYSFLLMFQTMPLGAIISTA--FGDIYACHGGLSPGLETIETIESLDRMIEPESNPNLMDILWADPISDENV 159
BLAST of mRNA_Ecto-sp6_S_contig10.558.1 vs. uniprot
Match: A0A836CLD0_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLD0_9STRA) HSP 1 Score: 127 bits (319), Expect = 1.710e-33 Identity = 58/127 (45.67%), Postives = 83/127 (65.35%), Query Frame = 1 Query: 1 RGLYSCEVALYLVSLKLAFPREVHLIRGNHETANQTATCGFKDECSAKYGSRIYDAFLECFSALPVCAILSQKGQLESLFCVHGGISPRLKTVNDIRRLERRVEPEEGTLLADLLWSDPSDDPSVVR 381 RG +SCEV L L++LKL P V L+RGNHE + +A GFK+EC KYG +Y FL CF ALP+ A++ K + +F HGGISP +KT++++ R++R EP+ L D+LWSDP ++ + Sbjct: 48 RGAFSCEVMLQLLALKLRHPASVFLLRGNHECSTVSAHFGFKEECKVKYGLTVYYQFLRCFQALPIAALIRTK--IGRIFAAHGGISPDIKTLDELNRIDRFAEPDMEGALCDILWSDPLNEDEAYK 172
BLAST of mRNA_Ecto-sp6_S_contig10.558.1 vs. uniprot
Match: A0A4D9CPK7_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CPK7_9STRA) HSP 1 Score: 132 bits (332), Expect = 3.600e-33 Identity = 63/125 (50.40%), Postives = 84/125 (67.20%), Query Frame = 1 Query: 1 RGLYSCEVALYLVSLKLAFPREVHLIRGNHETANQTATCGFKDECSAKYGSRIYDAFLECFSALPVCAILSQKGQLESLFCVHGGISPRLKTVNDIRRLERRVEPEEGTLLADLLWSDPSDDPSV 375 RG YSCEV LYL++LK+A+P +HL+RGNHET T GFK+EC AKYG +Y FL F +LP+CA++ LF HGGISP ++T+ +I+R++R VEP L DLLW+DP + V Sbjct: 375 RGAYSCEVLLYLLALKVAYPDLIHLLRGNHETRGATTYFGFKEECKAKYGLPVYYRFLLVFESLPLCAVVET--DYGRLFACHGGISPEIQTLAEIQRIDRFVEPGASGSLCDLLWADPWHEKKV 497
BLAST of mRNA_Ecto-sp6_S_contig10.558.1 vs. uniprot
Match: A0A8J5X4M6_DIALT (Serine/threonine-protein phosphatase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X4M6_DIALT) HSP 1 Score: 127 bits (320), Expect = 3.500e-32 Identity = 60/122 (49.18%), Postives = 77/122 (63.11%), Query Frame = 1 Query: 1 RGLYSCEVALYLVSLKLAFPREVHLIRGNHETANQTATCGFKDECSAKYGSRIYDAFLECFSALPVCAILSQKGQLESLFCVHGGISPRLKTVNDIRRLERRVEPEEGTLLADLLWSDPSDD 366 RG +SCEV LYL++LK P++V IRGNHE T T FK+EC KY R+YDAF++ F LP+CA+L K C HGGI P T+ DI R++R EP E + DLLW+DP+ D Sbjct: 122 RGTFSCEVVLYLMALKSTHPKKVFCIRGNHECRALTRTFNFKNECLHKYSMRVYDAFMDVFDTLPLCALLDAK-----FLCCHGGIGPSFHTLEDINRIDRFSEPPEAGPMCDLLWADPTPD 238
BLAST of mRNA_Ecto-sp6_S_contig10.558.1 vs. uniprot
Match: L7JTM2_TRAHO (Serine/threonine-protein phosphatase n=1 Tax=Trachipleistophora hominis TaxID=72359 RepID=L7JTM2_TRAHO) HSP 1 Score: 128 bits (321), Expect = 4.710e-32 Identity = 60/119 (50.42%), Postives = 79/119 (66.39%), Query Frame = 1 Query: 1 RGLYSCEVALYLVSLKLAFPREVHLIRGNHETANQTATCGFKDECSAKYGSRIYDAFLECFSALPVCAILSQKGQLESLFCVHGGISPRLKTVNDIRRLERRVEPEEGTLLADLLWSDP 357 RG +S EV L+L++LKLA+P+ V L+RGNHE++ T FK EC KY + +Y FL F ALP+CA++ +K +FCVHGGISP LK + DI R R VEP + DLLW+DP Sbjct: 157 RGSFSSEVFLFLMALKLAYPKNVILLRGNHESSEMTRYFSFKKECDIKYSNNMYKEFLSAFRALPLCAVVMKK-----IFCVHGGISPDLKEIEDINRFNRFVEPTSNKTMLDLLWADP 270 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.558.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig10.558.1 >prot_Ecto-sp6_S_contig10.558.1 ID=prot_Ecto-sp6_S_contig10.558.1|Name=mRNA_Ecto-sp6_S_contig10.558.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=134bp RGLYSCEVALYLVSLKLAFPREVHLIRGNHETANQTATCGFKDECSAKYGback to top mRNA from alignment at Ecto-sp6_S_contig10:1450131..1452648- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig10.558.1 ID=mRNA_Ecto-sp6_S_contig10.558.1|Name=mRNA_Ecto-sp6_S_contig10.558.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=2518bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:1450131..1452648- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig10:1450131..1452648- >mRNA_Ecto-sp6_S_contig10.558.1 ID=mRNA_Ecto-sp6_S_contig10.558.1|Name=mRNA_Ecto-sp6_S_contig10.558.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=402bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:1450131..1452648- (Ectocarpus species6 EcLAC_371)back to top |