mRNA_Ecto-sp6_S_contig10.545.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig10.545.1
Unique NamemRNA_Ecto-sp6_S_contig10.545.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.545.1 vs. uniprot
Match: A0A6H5KZP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZP2_9PHAE)

HSP 1 Score: 727 bits (1876), Expect = 7.960e-256
Identity = 352/405 (86.91%), Postives = 370/405 (91.36%), Query Frame = 1
Query:   10 KQMNVSVQTPDGKTLQLVISTNDTTTDVKKKIQDSEGIIPFDQQRLLCTNKTMDDLRTVSEYKIKEGDTLHLIQRVSGGGWACPPSLGKDVIFVKTLTGKTLELVVGSYNTIADMKQMIQDKESIPPDQQRLVFDGKQLEDGLPFSYYNIEGNSTLHLILRLRGGGFAAPPVAVGAKFADVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTNHHCDAHGGMVILNHGFRDFDLIRPGRDPKRCPMCNREVVPSTCAFTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRFEEGGEVQWDRLLIQVRPLLKLEQRVPSAPPADKRVKRPNTTANTATSTVAVVIDHTWGRCTRCTDCSAFGATPASDETVLDCGHRFHTRCLAGWEQGSMIVCPICREESSPLPQ 1224
            KQMNV VQTPDGKTLQLVISTND+TTDVKKKIQ SEGIIP D+QRLL TN+ MDDL TVSEYKIKEGDTLHLIQRVSGGGWA PPS G+ VIFVKTLTGKT++LVVGSYNTIAD+KQM+QD E IPPDQQRL+F G QLEDGL  S+YNI+GNSTLHL+LRLRGGGFAAPP+AVGAKF DVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTN  CDAHG MVILNHG RDFDLIRPGRDPKRCPMCN EVVPSTCAFTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRF+  GEV+WDRLLIQ RPLLKLEQRVPSAPPAD+RV+RPNTTA +ATSTVA VIDHTWGRC      SAFGAT ASDETVLDCGHRFHTRCL GWEQGSMIVCPICREES PLPQ
Sbjct:  181 KQMNVFVQTPDGKTLQLVISTNDSTTDVKKKIQHSEGIIPLDRQRLLYTNQMMDDLLTVSEYKIKEGDTLHLIQRVSGGGWASPPSCGEYVIFVKTLTGKTVKLVVGSYNTIADIKQMMQDMEGIPPDQQRLIFAGVQLEDGLTISFYNIQGNSTLHLVLRLRGGGFAAPPIAVGAKFVDVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTNSDCDAHGRMVILNHGLRDFDLIRPGRDPKRCPMCNFEVVPSTCAFTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRFDGRGEVEWDRLLIQARPLLKLEQRVPSAPPADERVERPNTTAISATSTVADVIDHTWGRCXXXXXXSAFGATSASDETVLDCGHRFHTRCLTGWEQGSMIVCPICREESWPLPQ 585          
BLAST of mRNA_Ecto-sp6_S_contig10.545.1 vs. uniprot
Match: D7G3U0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U0_ECTSI)

HSP 1 Score: 409 bits (1050), Expect = 1.400e-136
Identity = 188/202 (93.07%), Postives = 191/202 (94.55%), Query Frame = 1
Query:  619 PGLCLEGRCTNHHCDAHGGMVILNHGFRDFDLIRPGRDPKRCPMCNREVVPSTCAFTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRFEEGGEVQWDRLLIQVRPLLKLEQRVPSAPPADKRVKRPNTTANTATSTVAVVIDHTWGRCTRCTDCSAFGATPASDETVLDCGHRFHTRCLAGWEQGSMIVCPICREESSPLPQ 1224
            P LCLEGRCTN  CDAHG MVILNH FRDFDLIRPGRDPKRCPMCNREVVPSTCAFTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRFEEGGEVQWDRLLIQVRPLLKLEQRVPSAPPAD+R++RPNTTANTATSTVAVVIDHTW RCT     SAFGATPASDETVLDCGHRFHTRCLAGWEQGSMIVCPICREESSPLPQ
Sbjct:   18 PRLCLEGRCTNRQCDAHGRMVILNHAFRDFDLIRPGRDPKRCPMCNREVVPSTCAFTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRFEEGGEVQWDRLLIQVRPLLKLEQRVPSAPPADERMERPNTTANTATSTVAVVIDHTWSRCTXXXXXSAFGATPASDETVLDCGHRFHTRCLAGWEQGSMIVCPICREESSPLPQ 219          
BLAST of mRNA_Ecto-sp6_S_contig10.545.1 vs. uniprot
Match: A0A225VQY5_9STRA (Ubiquitin family protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VQY5_9STRA)

HSP 1 Score: 226 bits (575), Expect = 7.520e-64
Identity = 128/323 (39.63%), Postives = 177/323 (54.80%), Query Frame = 1
Query:  259 PPSLGKDVIFVKTLTGKTLELVVGSYNTIADMKQMIQDKESIPPDQQRLVFDGKQLEDGLPFSYYNIEGNSTLHLILRLRGGGFAAPPVAVGAKFADVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTNHHCDAHGGMVILNHGFRDFDLIRPGRDPKRCPMCNREVVPSTCAFTDCTWRYKGRKAGETNVLVGMWKEA-GDSYHRF---EEGGEVQWDRLLIQVRPLLKLEQRVPSAPPADKRVKRPNTTANTATSTVAVVIDHTWGRCTRCTDCSAFGATPASDETVLDCGHRFHTRCLAGWEQ-----GSMIVCPICR 1200
            P ++    I++KTLTGKTL++   S ++I ++KQ IQD++  PPDQQRL+F GK LEDG     Y I   S++  +LRLRGGG   P  ++   FADVSD+S L EH FS +AP+WR    GL +EGRC N  C A G M+I  + F  F+L+R  R    CPMC  +V P TC F DC W++ G ++ +   +   WK+A G+ YHRF   E+ G V+WD LLI V+P  +       A PA  +V    + +   + T+             C  C +   T A +     C H FHT C+  W Q      S+  CP+CR
Sbjct:   67 PLNMAAAFIYIKTLTGKTLKIHCTSTDSIDNVKQKIQDQDGTPPDQQRLIFAGKHLEDGRTLGDYGIFHGSSVCQVLRLRGGG--GPLTSM--YFADVSDNSILREHTFSTNAPQWRSCGKGLNIEGRCENRGCPAFGKMIIYPNRFNPFNLMRGDR--AHCPMCGDDVKPLTCGFYDCVWKFDGIRSSDGFSISSPWKDASGEKYHRFDADEKHGSVEWDSLLIMVKPRGEAASAKIIASPAIHQVNASTSDSEQESETI-------------CPICWSIAETVAGETITTHCEHTFHTSCIQEWAQWCSRHDSLPSCPVCR 370          
BLAST of mRNA_Ecto-sp6_S_contig10.545.1 vs. uniprot
Match: A0A5J4WRA2_9EUKA (Putative ring and ubiquitin domain containing protein (Fragment) n=2 Tax=Streblomastix strix TaxID=222440 RepID=A0A5J4WRA2_9EUKA)

HSP 1 Score: 223 bits (568), Expect = 9.120e-62
Identity = 147/398 (36.93%), Postives = 210/398 (52.76%), Query Frame = 1
Query:   16 MNVSVQTPDGKTLQLVISTNDTTTDVKKKIQDSEGIIPFDQQRLLCTNKTMDDLRTVSEYKIKEGDTLHLIQRVSGGGWACPPSLGKDVIFVKTLTGKTLELVVGSYNTIADMKQMIQDKESIPPDQQRLVFDGKQLEDGLPFSYYNIEGNSTLHLILRLRGGGFAAPPVAVGAKFADVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTNHHCDAHGGMVILNHGFRDFDLIRPGRDPKRCPMCNREVVPSTCAFTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRFEE--GGEVQWDRLLIQVRPLLKLEQRVPSAPPADKRVKRPNTTANTATSTVAVVIDHTWGRCTRCTDCSAFGATPASDETVLDCGHRFHTRCLAGWEQGSMIVCPICRE 1203
            M + ++T   KTL L ++++D     K+ IQ   GI   ++QRL+   K + D + + +  I+ G TL L+QR+  GG        +  I++KTLT KT+ L V S + I  +KQ I DKE IP +QQ+L+F GK+LED L    YNI+ +STLHLI RL GGG           F DV  +  L +  +S  AP WR+A  GLC+EG C N  C+A G MVI + GF DFDL         CPMC+    P   AF +C +R   +KA      +  WK+AGD Y+ ++E   G V + RL+I  + L    +        D + K    +A   T TV+ V     G C +  D + +G  P     V++CGH FH  C+A W++   + CPIC +
Sbjct:   94 MQIFIKTLQNKTLTLNVNSDDQIISAKQLIQGISGI-SVNEQRLIFAGKELTDDQKLCDCNIQSGKTLLLLQRLIVGGKV------EMQIYIKTLTQKTVTLQVRSDDQIISVKQQIVDKEHIPVEQQKLIFAGKELEDQLTLRDYNIQRDSTLHLIARLTGGG-------ASMSFVDVERTDALVQKKWSTSAPDWRLASKGLCIEGICENEGCEAKGQMVIFSAGFTDFDLEL---SVANCPMCHNPFKPIKPAFNNCMYRIDFQKANGAVTKI-PWKKAGDEYNTYDEKQAGIVDYTRLIIHTKVLAAGRENT------DSKGK----SAELETVTVSKVC----GICHKMLDVT-YGRDPT---VVMNCGHSFHGGCVASWKERG-LDCPICED 454          
BLAST of mRNA_Ecto-sp6_S_contig10.545.1 vs. uniprot
Match: S4W648_9VIRU (Ubiquitin n=1 Tax=Pandoravirus salinus TaxID=1349410 RepID=S4W648_9VIRU)

HSP 1 Score: 226 bits (576), Expect = 2.160e-61
Identity = 130/359 (36.21%), Postives = 188/359 (52.37%), Query Frame = 1
Query:  145 LLCTNKTMDDLRTVSEYKIKEGDTLHLIQRVSGGGWACPPSLGKDVIFVKTLTGKTLELVVGSYNTIADMKQMIQDKESIPPDQQRLVFDGKQLEDGLPFSYYNIEGNSTLHLILRLRGGGFAAPPVAVGAKFADVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTNHHCDAHGGMVILNHGFRDFDLIRPGRDPKRCPMCNREVVPSTCAFTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRF--EEGGEVQWDRLLIQVRPLLKLEQ---RVPSAPPADKRVKRPNTTANTATSTVAVVIDHTWGRCTRCTDCSAFGATPASDETVLDCGHRFHTRCLAGWEQGSMIVCPICREE 1206
            L    +T+D+ +T  E+ I+ G  L ++ +         PS     +FV+TLTGK + +     N+I ++K +I DKE +PPDQQRL++ G+Q+EDG   + Y I   +++HL+LRLRGGG   PP +  A F D+ ++  +    +S  AP WR+ +PGLC+EGRC N  C A+G MVI+N GF  FDL+    D   CP C++ V P TCAF +C W++ G K G++    G W  A D+YH F  +E G V+W RLLI+ R + K+ +     P   P D                              C  C +     +    VLDCGH FH+ C+  W   S   CP CR +
Sbjct:  308 LALNGETLDEDKTWVEHGIEAGTWLSIVPK---------PSRSFQ-LFVQTLTGKVITIEAAPANSIEEIKCIIHDKEGLPPDQQRLLYAGQQMEDGRRLADYAIRAEASMHLVLRLRGGG-GGPPAS--ATFVDMENTGAMQCRQWSKSAPDWRIVKPGLCIEGRCKNVGCAAYGRMVIVNKGFDTFDLLLDA-DTCACPECDKHVKPKTCAFNNCWWKWNGIKEGDSRKYAGKWTLADDNYHCFAEDEAGSVEWTRLLIRARSIPKVAKSGGNEPIGKPFDMF----------------------------CCICIS-SINSSGVHKVLDCGHAFHSPCIDAWVARSP-TCPHCRHK 622          
BLAST of mRNA_Ecto-sp6_S_contig10.545.1 vs. uniprot
Match: A0A5J4VNX4_9EUKA (Putative ring and ubiquitin domain containing protein n=1 Tax=Streblomastix strix TaxID=222440 RepID=A0A5J4VNX4_9EUKA)

HSP 1 Score: 214 bits (544), Expect = 3.640e-57
Identity = 145/380 (38.16%), Postives = 195/380 (51.32%), Query Frame = 1
Query:  103 IQDSEGIIPFDQQRLLCTNKTMDDLRTVSEYKIKEGDTLHLIQRVSGGGWACPPSLGKDV-IFVKTLTGKTLELVVGSYNTIADMKQMIQDKESIPPDQQRLVFDGKQLEDGLPFSYYNIEGNSTLHLILRLRGGGFAAPPVAVGAKFADVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTNHHCDAHG-GMVILNHGFRDFDLIRPGRDPKRCPMCNREVVPSTCAFTDCTWRYKGRKAGETNVLVGM--WKEAGDSYHRFEEG--GEVQWDRLLIQVRPLLKL-EQRVPSAPPADKRVKRPNTTANTATSTVAVVIDHTWGRCTRCTDCSAFGATPASDET-----VLDCGHRFHTRCLAGWEQGSMIVCPICREE 1206
            I++ EG+ P DQ RL      +   RT+ +Y ++E DTL L +            LG  + IF+KTLTGKT+ L V + NTI ++K +IQDKE IPP+QQRL+F GKQLEDG   + Y I   +TLHL+LRLRGGG A         F DV  S  L +  +S  AP+WR    G+ +EGRC N  C AH  GMVI N GF DFDL+R   +   CPMC   +      F +C WR   RK   TN ++    WK+AGD Y  ++E   G   + RL++  + L    EQ + S     K +K           T  +V     G C  C +         +DE      V+ C H FH  C+  W+  S + CP C+E+
Sbjct:  262 IKEKEGLSP-DQYRLFSEYSKIRQDRTIQDYGLEELDTLELYK------------LGISMKIFIKTLTGKTIALQVQNDNTIEEIKSLIQDKEGIPPEQQRLIFAGKQLEDGYLLADYKILKEATLHLVLRLRGGGEAM-------NFVDVERSDALIQRQWSKTAPQWRCVSRGMAIEGRCDNSSCQAHNRGMVIFNVGFSDFDLLR---NESHCPMCYSRIKGIKPGFNNCIWRIDFRK---TNGIISRLKWKKAGDEYTTYDEAQAGTADFTRLIMHAKQLSDTREQTIVSE---GKEMK-----------TTFIV----GGSCGLCHE-------DKNDERDKNVIVMKCSHNFHKVCIKIWKD-SGLKCPHCKED 589          
BLAST of mRNA_Ecto-sp6_S_contig10.545.1 vs. uniprot
Match: A0A6A3GVD8_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3GVD8_9STRA)

HSP 1 Score: 205 bits (522), Expect = 8.320e-56
Identity = 121/320 (37.81%), Postives = 165/320 (51.56%), Query Frame = 1
Query:  271 GKDVIFVKTLTGKTLELVVGSYNTIADMKQMIQDKESIPPDQQRLVFDGKQLEDGLPFSYYNIEGNSTLHLILRLRGGGFAAPPVAVGAKFADVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTNHHCDAHGGMVILNHGFRDFDLIRPGRDPKRCPMCNREVVPSTCAFTDCTWRYKGRKAGETNVLVGMWKEAGDS-YHRF---EEGGEVQWDRLLIQVRPLLKLEQRVPSAPPADKRVKRPNTTANTATSTVAVVIDHTWGRCTRCTDCSAFGATPASDETVLDCGHRFHTRCLAGWEQ-----GSMIVCPICRE 1203
            G  V+ +K+LTGK         ++I ++K  IQDK  IPPDQQRL+  G QL+DG   S Y I+  S L + LRLRGGG   PP  V   F DVSD+S LTE + S+ AP WRV + GL +EG C N  C+A G MVI  +GF  F+L+  G     CP C     P TC F  C W+++G ++ +   +   W+ AG+S YHRF   E  G V+W+ LLI V+                    R  +TA    +T   +I      C+ C   S FG+T     +   CGH FH  C+  W +      ++  CP+CR+
Sbjct:  116 GDLVLTIKSLTGKIAIFCAMPSDSIDNVKLRIQDKWGIPPDQQRLICAGVQLQDGRALSDYKIKTGSELLVFLRLRGGGGPRPPRKV---FVDVSDNSNLTEQSLSNEAPDWRVCDEGLNIEGECENRECEAFGQMVIYQYGFDSFNLM--GDRDVECPKCYETFTPITCGFYKCVWKFEGVRSSDGYFISSPWQNAGESKYHRFDSDENSGSVEWNSLLIVVK-------------------SRRESTAVKIPATTRSMIVRKDNVCSICW--SRFGSTAKRTMSTAKCGHTFHRECINKWSEWCSSHDALPSCPLCRQ 409          
BLAST of mRNA_Ecto-sp6_S_contig10.545.1 vs. uniprot
Match: A0A6A3IE52_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3IE52_9STRA)

HSP 1 Score: 201 bits (512), Expect = 1.260e-54
Identity = 125/317 (39.43%), Postives = 165/317 (52.05%), Query Frame = 1
Query:  280 VIFVKTLTGKTLELVVGSYNTIADMKQMIQDKESIPPDQQRLVFDGKQLEDGLPFSYYNIEGNSTLHLILRLRGGGFAAPPVAVGAKFADVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTNHHCDAHGGMVILNHGFRDFDLIRPGRDPKRCPMCNREVVPSTCAFTDCTWRYKGRKAGETNVLVGMWK-EAGDSYHRF---EEGGEVQWDRLLIQVRPLLKL--EQRVPSAPPADKRVKRPNTTANTATSTVAVVIDHTWGRCTRCTDCSAFGATPASDETVLDCGHRFHTRCLAGWE-----QGSMIVCPIC 1197
            +I++KTLTGKT  +   + NTI ++K  IQ++E IPPDQQR++F GKQLEDG   S YNI+  STLHL+LRLRGG +  P       FADVSD S   EH FS  AP WR+   GL +EGRC N  C A+  +VI   GF  F+L + G     CP C  +V P TC F DC W+++G KA         W+  +G+ Y RF   E  G ++W+ LLI V+PL +    + V SA  A                       H+   C  C      G+   S+     CGH FH  C+  W      Q ++  CP+C
Sbjct:  103 MIYIKTLTGKTTHVNCHAANTIEEIKYDIQEQEGIPPDQQRIIFAGKQLEDGRKLSDYNIQYGSTLHLVLRLRGG-YVEPRC-----FADVSDGSISVEHEFSRTAPEWRICRKGLNIEGRCMNRTCIAYHELVIHPAGFEMFNLRKDG--DVTCPKCRSKVKPVTCGFYDCAWKFEGVKARGGFFTSSPWQIVSGEKYQRFDADETSGSIEWESLLILVKPLKEAVAAELVESAQEARL---------------------HSDLVCAVCWTEILSGSGAGSE-----CGHLFHCGCIENWSKWSEGQKTLTKCPVC 385          
BLAST of mRNA_Ecto-sp6_S_contig10.545.1 vs. uniprot
Match: A0A815UV84_9BILA (Hypothetical protein n=6 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A815UV84_9BILA)

HSP 1 Score: 194 bits (492), Expect = 7.620e-54
Identity = 99/221 (44.80%), Postives = 134/221 (60.63%), Query Frame = 1
Query:  283 IFVKTLTGKTLELVVGSYNTIADMKQMIQDKESIPPDQQRLVFDGKQLEDGLPFSYYNIEGNSTLHLILRLRGGGFAAPPVAVGAKFADVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTNHHCDAHGGMVILNHGFRDFD-LIRPGRDPKRCPMCNREVVPSTCAFTDCTWRYKGRKAGETN----VLVGMWKEAGDSYHRFEE--GGEVQWDRLLIQ 924
            +F+KT T KTL +     +TI ++K  IQ KE IPPDQQR++F GKQLEDG   + YNI+   TLH+++RLRGG        +G  F D+S+ SGL    +S  AP+WR A PGLCLEG+CTN +C A+   VI+N  F+ FD L+   +   +CP+C   V P+TC F  C W +KG K G          G W EA ++YH F+E   G V W +L+I+
Sbjct:    3 VFIKTHTCKTLTIECECSDTIENLKYKIQGKEGIPPDQQRIIFGGKQLEDGRTLADYNIQKEFTLHMVIRLRGGD-------MGVDFVDLSNGSGLKRLNWSTSAPKWRKAGPGLCLEGQCTNRNCKAYSQAVIMNIRFKKFDMLLDVNQTTCQCPICKEYVKPNTCGFNRCWWCWKGIKEGGAGEPPKACSGNWTEADNAYHYFDEKISGSVTWRQLIIE 216          
BLAST of mRNA_Ecto-sp6_S_contig10.545.1 vs. uniprot
Match: L8HGQ1_ACACA (Ubiquitin domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HGQ1_ACACA)

HSP 1 Score: 204 bits (518), Expect = 2.380e-53
Identity = 130/370 (35.14%), Postives = 183/370 (49.46%), Query Frame = 1
Query:  142 RLLCTNKTMDDLRTVSEYKIKEGDTLHLIQRVSGGGWACPPSLGKDVIFVKTLTGKTLELVVGSYNTIADMKQMIQDKESIPPDQQRLVFDGKQLEDGLPFSYYNIEGNSTLHLILRLRGGGFAAPPVAVGAKFADVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTNHHCDAHGGMVILNHGFRDFDLIRPGRDPKRCPMCNREVVPSTCAFTDCTWRY----KGRKAGETNVLVGMW--------KEAGDSYHRFEE--GGEVQWDRLLIQVRPLLKLEQRVPSAPPADKRVKRPNTTANTATSTVAVVIDHTWGRCTRCTDCSAFGATPASDET-VLDCGHRFHTRCLAGWEQGSMIVCPICREE 1206
            R+    + +D+ +T +EY +++G  + L+ R   G W          IF KTLTGKT+ L  G  + I ++K +++ KE IP DQQRL+F GKQLEDG     Y I+  STL L+LRLRGGG  A     G+ F D+S+++ L    +S  AP+WRVA PGL +EG CTN  C+A    VI+N     FDL+        CP C   V P+TCAF +C W++    KG +AG+  + + +W        ++A ++YHRF E   G V+W RLLI  + + + E       P +                                 C       A++E   L CGH FH  CL  W   S   CP CR +
Sbjct:  295 RVALGGELLDESKTWAEYALEQGTWISLVPRP--GVWF--------QIFCKTLTGKTITLEAGPAHPITEVKVLVEAKEGIPADQQRLLFAGKQLEDGTCLGDYAIDRESTLQLVLRLRGGGLTA-----GSLFVDMSNTNALERRQWSSKAPQWRVAMPGLSVEGVCTNRECEAFDRSVIINKHHGTFDLLLDAHTC-HCPSCGSYVEPATCAFNNCWWKWSGIKKGARAGQPPLHM-VWLHLSTNNREQADNAYHRFSEDKAGTVEWLRLLIHTKRIQECEDSAVPRKPFEMFC------------------------------CICICDIKATEEVKTLACGHAFHPPCLDEWTARSP-TCPYCRRD 616          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.545.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZP2_9PHAE7.960e-25686.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3U0_ECTSI1.400e-13693.07RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A225VQY5_9STRA7.520e-6439.63Ubiquitin family protein n=1 Tax=Phytophthora mega... [more]
A0A5J4WRA2_9EUKA9.120e-6236.93Putative ring and ubiquitin domain containing prot... [more]
S4W648_9VIRU2.160e-6136.21Ubiquitin n=1 Tax=Pandoravirus salinus TaxID=13494... [more]
A0A5J4VNX4_9EUKA3.640e-5738.16Putative ring and ubiquitin domain containing prot... [more]
A0A6A3GVD8_9STRA8.320e-5637.81Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]
A0A6A3IE52_9STRA1.260e-5439.43Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]
A0A815UV84_9BILA7.620e-5444.80Hypothetical protein n=6 Tax=Rotaria magnacalcarat... [more]
L8HGQ1_ACACA2.380e-5335.14Ubiquitin domain containing protein n=1 Tax=Acanth... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:1297573..1299653 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score198.0
Seed ortholog evalue8.6e-48
Seed eggNOG ortholog4792.ETI43370
Model size2081
KEGG koko:K08770
KEGG Pathwayko03320,map03320
Hectar predicted targeting categoryother localisation
Exons1
EggNOG free text desc.Ubiquitin family
EggNOG OGs3QEPQ@4776,COG5272@1,KOG0001@2759
Ec32 ortholog descriptionZinc finger, RING/FYVE/PHD-type
Ec32 orthologEc-00_007020.1
Cds size1212
COG Functional cat.O
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04121
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348706.7591307-UTR-Ecto-sp6_S_contig10:1297572..12975871682348706.7591307-UTR-Ecto-sp6_S_contig10:1297572..1297587Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig10 1297573..1297587 +
1682348706.7815137-UTR-Ecto-sp6_S_contig10:1298799..12996531682348706.7815137-UTR-Ecto-sp6_S_contig10:1298799..1299653Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig10 1298800..1299653 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348706.7715833-CDS-Ecto-sp6_S_contig10:1297587..12987991682348706.7715833-CDS-Ecto-sp6_S_contig10:1297587..1298799Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1297588..1298799 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.545.1prot_Ecto-sp6_S_contig10.545.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig10 1297588..1298799 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig10.545.1

>prot_Ecto-sp6_S_contig10.545.1 ID=prot_Ecto-sp6_S_contig10.545.1|Name=mRNA_Ecto-sp6_S_contig10.545.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=404bp
MNVSVQTPDGKTLQLVISTNDTTTDVKKKIQDSEGIIPFDQQRLLCTNKT
MDDLRTVSEYKIKEGDTLHLIQRVSGGGWACPPSLGKDVIFVKTLTGKTL
ELVVGSYNTIADMKQMIQDKESIPPDQQRLVFDGKQLEDGLPFSYYNIEG
NSTLHLILRLRGGGFAAPPVAVGAKFADVSDSSGLTEHAFSDHAPRWRVA
EPGLCLEGRCTNHHCDAHGGMVILNHGFRDFDLIRPGRDPKRCPMCNREV
VPSTCAFTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRFEEGGEVQWDRL
LIQVRPLLKLEQRVPSAPPADKRVKRPNTTANTATSTVAVVIDHTWGRCT
RCTDCSAFGATPASDETVLDCGHRFHTRCLAGWEQGSMIVCPICREESSP
LPQ*
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mRNA from alignment at Ecto-sp6_S_contig10:1297573..1299653+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig10.545.1 ID=mRNA_Ecto-sp6_S_contig10.545.1|Name=mRNA_Ecto-sp6_S_contig10.545.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=2081bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:1297573..1299653+ (Ectocarpus species6 EcLAC_371)
CGCTTGCAGAAGCAGATGAACGTCTCCGTCCAGACCCCCGACGGGAAAAC ACTCCAGCTTGTCATCAGCACGAACGACACGACCACCGACGTGAAGAAAA AGATCCAGGACAGCGAGGGCATCATCCCGTTCGACCAGCAGCGTCTGCTC TGCACAAACAAAACGATGGATGATCTTCGGACGGTTTCAGAATACAAGAT CAAAGAAGGAGACACGCTTCACTTGATTCAGCGTGTGAGCGGGGGCGGGT GGGCGTGTCCTCCCTCGCTTGGAAAGGATGTGATCTTCGTCAAGACACTC ACCGGAAAAACTCTCGAGCTTGTCGTCGGCTCGTACAACACGATCGCAGA CATGAAGCAAATGATTCAGGACAAGGAGAGTATCCCGCCCGACCAGCAGC GCCTGGTATTCGACGGCAAGCAGCTGGAGGACGGTCTTCCGTTTTCATAC TACAACATCGAAGGAAATTCTACGCTTCACTTAATCCTTCGCTTGAGAGG AGGTGGATTCGCTGCTCCCCCAGTTGCCGTTGGCGCGAAATTTGCCGACG TTTCCGACTCGTCCGGCCTCACAGAGCACGCCTTCTCGGACCACGCCCCG CGCTGGAGGGTTGCCGAGCCCGGGCTGTGCCTGGAAGGAAGGTGCACCAA CCACCACTGCGACGCTCACGGCGGCATGGTCATCCTCAACCATGGGTTCC GGGACTTCGACCTGATCCGGCCCGGCAGAGACCCGAAGCGCTGCCCAATG TGCAACCGCGAGGTGGTGCCGAGCACGTGTGCCTTCACCGACTGCACGTG GAGGTACAAGGGGCGGAAGGCCGGGGAGACCAACGTCCTGGTCGGCATGT GGAAAGAGGCCGGCGACAGCTACCACCGCTTCGAGGAAGGAGGTGAGGTG CAGTGGGACAGGCTGCTCATCCAGGTCAGGCCCCTGCTCAAGCTCGAGCA ACGTGTCCCTTCCGCACCACCGGCGGACAAGAGGGTGAAACGTCCGAACA CGACAGCCAATACCGCTACGTCAACCGTAGCAGTCGTGATCGACCACACG TGGGGTCGATGCACGAGGTGCACGGATTGTTCCGCGTTCGGGGCAACCCC TGCGTCCGACGAGACGGTCCTGGACTGTGGCCACCGGTTCCACACCAGGT GCCTCGCGGGCTGGGAGCAGGGCTCGATGATCGTCTGTCCCATCTGCCGG GAAGAGTCGTCGCCGCTGCCTCAGTAGAGAGCAGTGTCGACATGCATGTT GGCATGTTTGACCGACCCAGGGCTCGACGCAGTGCGCGTGGTGTGTGTGT CGTGTGTTTGAATATCGATGCATCGTTACTATACCGGATGAAAGAAAAAA CGTATTTCTTTCTTTAGATGGGTCACCTGTCAACACCAGGAGGCGTAGAT ATGCTGCTGCTAGTGGTTTGATGATGAGCTCCTCCTCCTGCAAGTGTTGT TTCGAGTTGTGCGGGTAAATGCCGGGCATACGTCGACTGTGATCCGAAGA CGAAGCAGAACAGGAGAGCGTTTATGTCTCCGCCGTGATTGCCTCGGGGA GTCGTCTGTATGACGCGAATTGGGTTGGTTTAGGTTCAGCTGGGTTGGGT CGAATCGACTTGGGCTGGTCGATTTTGGGTACTGAAATGTGCCCTCTCGA TTTCACGTGTTCGTACCACGGGGTACATTAGGAAAGGGCACATAGCAGGT CTCCACCCACGGGGGTGTTGGGGATACCTCTTTCCCGACACGACACGGAC ACTACCATGTGATACTGCGTGGTCTCGCAAAGTTTGTGCGACTTGGGGGC GCCATTTCGAACCTAGCTGCGCTGTAAGTTGTTGTATTATCGGTCGCCGA ACGCGCCACGAAGATGGCCGATCTGAACGTAATGTTTGTGCACACATCTG GTTGTATGGGACGAGCCATCCCACTGCAACCAACATGAATGCGAATATTG GAACAGGCACACAGCGCGTCGTACCAAGTCGCGGGGCGAGGTGGAGATGA AACAATGCGTCAAGTTCCCCAAACGGCACACACGCACGTGGTAGGGCAAA CACATGCACTAGCATGCATAGAAAATGAAAC
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig10:1297573..1299653+

>mRNA_Ecto-sp6_S_contig10.545.1 ID=mRNA_Ecto-sp6_S_contig10.545.1|Name=mRNA_Ecto-sp6_S_contig10.545.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1212bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:1297573..1299653+ (Ectocarpus species6 EcLAC_371)
ATGAACGTCTCCGTCCAGACCCCCGACGGGAAAACACTCCAGCTTGTCAT
CAGCACGAACGACACGACCACCGACGTGAAGAAAAAGATCCAGGACAGCG
AGGGCATCATCCCGTTCGACCAGCAGCGTCTGCTCTGCACAAACAAAACG
ATGGATGATCTTCGGACGGTTTCAGAATACAAGATCAAAGAAGGAGACAC
GCTTCACTTGATTCAGCGTGTGAGCGGGGGCGGGTGGGCGTGTCCTCCCT
CGCTTGGAAAGGATGTGATCTTCGTCAAGACACTCACCGGAAAAACTCTC
GAGCTTGTCGTCGGCTCGTACAACACGATCGCAGACATGAAGCAAATGAT
TCAGGACAAGGAGAGTATCCCGCCCGACCAGCAGCGCCTGGTATTCGACG
GCAAGCAGCTGGAGGACGGTCTTCCGTTTTCATACTACAACATCGAAGGA
AATTCTACGCTTCACTTAATCCTTCGCTTGAGAGGAGGTGGATTCGCTGC
TCCCCCAGTTGCCGTTGGCGCGAAATTTGCCGACGTTTCCGACTCGTCCG
GCCTCACAGAGCACGCCTTCTCGGACCACGCCCCGCGCTGGAGGGTTGCC
GAGCCCGGGCTGTGCCTGGAAGGAAGGTGCACCAACCACCACTGCGACGC
TCACGGCGGCATGGTCATCCTCAACCATGGGTTCCGGGACTTCGACCTGA
TCCGGCCCGGCAGAGACCCGAAGCGCTGCCCAATGTGCAACCGCGAGGTG
GTGCCGAGCACGTGTGCCTTCACCGACTGCACGTGGAGGTACAAGGGGCG
GAAGGCCGGGGAGACCAACGTCCTGGTCGGCATGTGGAAAGAGGCCGGCG
ACAGCTACCACCGCTTCGAGGAAGGAGGTGAGGTGCAGTGGGACAGGCTG
CTCATCCAGGTCAGGCCCCTGCTCAAGCTCGAGCAACGTGTCCCTTCCGC
ACCACCGGCGGACAAGAGGGTGAAACGTCCGAACACGACAGCCAATACCG
CTACGTCAACCGTAGCAGTCGTGATCGACCACACGTGGGGTCGATGCACG
AGGTGCACGGATTGTTCCGCGTTCGGGGCAACCCCTGCGTCCGACGAGAC
GGTCCTGGACTGTGGCCACCGGTTCCACACCAGGTGCCTCGCGGGCTGGG
AGCAGGGCTCGATGATCGTCTGTCCCATCTGCCGGGAAGAGTCGTCGCCG
CTGCCTCAGTAG
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