mRNA_Ecto-sp6_S_contig10.542.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig10.542.1
Unique NamemRNA_Ecto-sp6_S_contig10.542.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.542.1 vs. uniprot
Match: A0A6H5L4A3_9PHAE (TYR_PHOSPHATASE_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4A3_9PHAE)

HSP 1 Score: 755 bits (1949), Expect = 2.650e-268
Identity = 507/581 (87.26%), Postives = 511/581 (87.95%), Query Frame = 1
Query:  103 MTRPLAAPEIGPPSTDXXXXXXXXXXXXXXXXXXXVDEGLVAAVELLLAEVEALRRASSFPGLEALSSIDKAGRYLGPTMESNWVLPGSLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYRAEGVTEEMWRSGDALRPYFQDVVQLLAKLGELRRADPRSVPAICAPEETDFVHFPIVDCNVADDTKVLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQVRRVIGRVIAHRRSLVPSPPXXXXXXXXXXXXXXXXXXXXSSPSNGGG---ISGADLSPESSRXXXXXXXXXXXXXXXXXXGGRRAWVRGRRQAFAQAPNGVGEDVSGWLDDDNEAEGDGLSDLQRGKKLKAGAGQTSAHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-MPRRKSFTEPYSKDDPSRGTRMSRARRKSAPGKPPADVLAARXXXXXXXXXXXXXXXXXXKEDKDDGWTKSLLSISPAKGINCRQTPSVAACSTQGDDAAAAASPGSCTGVERCVTRSSGGGGGTSYHAR 1833
            MTRPLAAPEIGPP TD XXXXX     XXXX    VDEGLVAAVELLLAEVEALRRASSFPGLEALSSIDKAGRYLGPTMESNWVLPG LLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYRAEGVTEEMWRSGDALRPYFQDVVQLLAKLGELRRADPRSVPAICAPEETDFVHFPIVDCNVADDTKVLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGL ADEAMERCQHVHDVRRIPISVGSPQTE+QRQQVRRVIGRVIAHRRSLVPS P   XXXXXXXXXXXXXXXXX           ISG+ LSPESSR                  GGRRAWVRGRRQAFAQAPNGVGEDVSGWLDDDNE EGDGLSDLQ GKKLKAGAGQTSAHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MPRRKSFTEPYSKD+PSRG RMSRARRKSAPGKPPADVLAARXXXXXXXXXXXXXXXXXX           LL +SPAKGINCRQT S AACST GDDAAAA SPGSCTGVERCVTRSSGGG GTS  AR
Sbjct:    1 MTRPLAAPEIGPPLTDDXXXXXAVSDVXXXXGEEEVDEGLVAAVELLLAEVEALRRASSFPGLEALSSIDKAGRYLGPTMESNWVLPGRLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYRAEGVTEEMWRSGDALRPYFQDVVQLLAKLGELRRADPRSVPAICAPEETDFVHFPIVDCNVADDTKVLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLGADEAMERCQHVHDVRRIPISVGSPQTESQRQQVRRVIGRVIAHRRSLVPSSPPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXISGSVLSPESSRKKEAGRGATTAASAPTTVGGRRAWVRGRRQAFAQAPNGVGEDVSGWLDDDNEVEGDGLSDLQGGKKLKAGAGQTSAHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMPRRKSFTEPYSKDEPSRGMRMSRARRKSAPGKPPADVLAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLL-LSPAKGINCRQTSSNAACSTPGDDAAAAPSPGSCTGVERCVTRSSGGG-GTSCRAR 579          
BLAST of mRNA_Ecto-sp6_S_contig10.542.1 vs. uniprot
Match: D7G3T8_ECTSI (TYR_PHOSPHATASE_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T8_ECTSI)

HSP 1 Score: 492 bits (1267), Expect = 1.200e-169
Identity = 267/269 (99.26%), Postives = 268/269 (99.63%), Query Frame = 1
Query:  103 MTRPLAAPEIGPPSTDXXXXXXXXXXXXXXXXXXXVDEGLVAAVELLLAEVEALRRASSFPGLEALSSIDKAGRYLGPTMESNWVLPGSLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYRAEGVTEEMWRSGDALRPYFQDVVQLLAKLGELRRADPRSVPAICAPEETDFVHFPIVDCNVADDTKVLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQ 909
            MTRPLAAPEIGPPSTDXXXXXXXXXXXXXXXXXXXVDEGLVAAVELLLAEVEALRRASSFPGLEALSSIDKAGRYLGPTMESNWVLPG LLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEY+AEGVTEEMWRSGDALRPYFQDVVQLLAKLGELRRADPRSVPAICAPEETDFVHFPIVDCNVADDTKVLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQ
Sbjct:    1 MTRPLAAPEIGPPSTDXXXXXXXXXXXXXXXXXXXVDEGLVAAVELLLAEVEALRRASSFPGLEALSSIDKAGRYLGPTMESNWVLPGRLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYQAEGVTEEMWRSGDALRPYFQDVVQLLAKLGELRRADPRSVPAICAPEETDFVHFPIVDCNVADDTKVLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQ 269          
BLAST of mRNA_Ecto-sp6_S_contig10.542.1 vs. uniprot
Match: A0A7S3YH03_HETAK (Protein-tyrosine-phosphatase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YH03_HETAK)

HSP 1 Score: 253 bits (645), Expect = 1.730e-76
Identity = 129/221 (58.37%), Postives = 158/221 (71.49%), Query Frame = 1
Query:  274 SSFPGLEALSSIDKAGR-YLGPTMESNWVLPGSLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYRAEGVTEEMWRSGDALRPYFQDVVQLLAKLGELRRADPRSVPAICAPEETDFVHFPIVDCNVADDTKVLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQVRRVIGRV 933
            SSFP LE L  I K    Y+GPT ESNWV+PG LLVGAYP SM+D     +L  IL+  V+TFVCLQQEY  EGVTE+MWRSG+ LRPYF+D V    +LG     D  S+           +HFPI DC  ADD ++  LA  L   LA+GEVMYLHCWGGHGRTGTV+C++LHLMY  +AD+A ERCQ++HD+RRIP++VGSPQT+ QR+QVRRVI ++
Sbjct:   21 SSFPTLEDLRDIAKHPEDYVGPTDESNWVIPGLLLVGAYPCSMDDVETWEILRGILVLKVTTFVCLQQEYVHEGVTEQMWRSGEYLRPYFKDAVGFAPRLG----LDAASL---------SLLHFPIEDCGTADDDRLAALAHHLVSLLAKGEVMYLHCWGGHGRTGTVICLLLHLMYNYTADQAFERCQYLHDLRRIPVAVGSPQTQGQREQVRRVIEKL 228          
BLAST of mRNA_Ecto-sp6_S_contig10.542.1 vs. uniprot
Match: A0A5A8C9N1_CAFRO (TYR_PHOSPHATASE_2 domain-containing protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C9N1_CAFRO)

HSP 1 Score: 218 bits (555), Expect = 6.150e-63
Identity = 118/219 (53.88%), Postives = 145/219 (66.21%), Query Frame = 1
Query:  325 YLGPTMESNWVLPGSLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYRAEGVTEEMWRSGDALRPYFQDVVQLLAKLGELRRADPRSVPAICAPEETD---FVHFPIVDCNVADDTKVLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQVRRVIGR--VIAHRRSLVPSP 966
            Y GPT ESNWVL G LLVGAYP +++D  +  +L +IL  G++TFVCLQ EY+  GV+ E W +G  LRPY  D V+LL  +   R   P      CAP+ T+   F+HFPIVDC+ A+DT VL+LA  L  RLA GE +Y+HCWGGHGRTGTVV IML LMYGL A   M   QHVHD+R  P+ VG+PQT  QR+QV R++      A R SL P P
Sbjct:   51 YRGPTEESNWVLHGRLLVGAYPGAVDDGQNDAILRSILELGITTFVCLQSEYQHRGVSREDWIAGTKLRPYIYDAVRLLPSI---RWPSPSQC---CAPKPTEGLHFLHFPIVDCSTANDTGVLELAHDLVNRLASGENLYVHCWGGHGRTGTVVSIMLGLMYGLPARNCMAYLQHVHDLRICPMDVGTPQTSQQRRQVIRILSARPPAAPRASLAPDP 263          
BLAST of mRNA_Ecto-sp6_S_contig10.542.1 vs. uniprot
Match: A0A813AT18_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813AT18_9DINO)

HSP 1 Score: 214 bits (544), Expect = 5.180e-61
Identity = 119/227 (52.42%), Postives = 143/227 (63.00%), Query Frame = 1
Query:  253 VEALRRASSFPGLEALSSIDKAGRYLGPTMESNWVLPGSLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYRAEGVTEEMWRSGDALRPYFQDVVQLLAKLGELRRADPRSVPAICAPEETDFVHFPIVDCNVADDTKVLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQVRRVIGRV 933
            V+ L   +  P LEA  SID    Y+GPT ESNWV+P  +LVGAYP +  D  ++ +L +IL  GV+TFVCLQ EY+  GVTEE WRSG+ LRPY  D +QLL    E   AD    P    P+  DFVH PIVDC    D KVL LA  L  RL  GE +Y+HCWGGHGRTGTVV +ML +MYGL    AM   Q  HD+R  P  V SPQT  QR+QV R++ +V
Sbjct:   38 VKPLADYADVPPLEAPVSIDPDS-YIGPTEESNWVIPSRMLVGAYPGATEDELNSEILTSILELGVTTFVCLQSEYQHHGVTEEQWRSGEKLRPYIFDALQLL----ETCPAD--YFPEGRKPDSLDFVHLPIVDCATVSDGKVLSLAYDLCRRLKAGENLYVHCWGGHGRTGTVVSLMLGIMYGLPPMAAMAWVQMFHDMRIAPCGVPSPQTAEQRKQVTRILVKV 257          
BLAST of mRNA_Ecto-sp6_S_contig10.542.1 vs. uniprot
Match: A0A7S2WTD1_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WTD1_9STRA)

HSP 1 Score: 205 bits (521), Expect = 9.860e-57
Identity = 109/241 (45.23%), Postives = 145/241 (60.17%), Query Frame = 1
Query:  214 EGLVAAVELLLAEVEALRRASSFPGLEALSSIDKAGRYLGPTMESNWVLPGSLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYRAEGVTEEMWRSGDALRPYFQDVVQLLAKLGELRRADPRSVPAICAPEETDFVHFPIVDCNVADDTKVLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQVRRVIGRVI 936
            E  + A  LL  ++   ++  SF  +E        G Y+GPT ESNWVLPG LLVGAYPA ++D  H  LL +IL  GV+TFVCLQ+EY       + WR+G  +RPY  D  ++  +   L           C   E  F+H PI DC+V  D  VL+LA  L  RL  GEV+Y+HCWGGHGRTGT+V IML ++YG+   EA++R Q  HD+R  P+ V SPQT +QR QV R++ +V+
Sbjct:   28 EEALGAEALLDCQLGISQKLPSFKEIE-----QHRGMYVGPTEESNWVLPGKLLVGAYPAEVDDVAHEKLLRSILQCGVTTFVCLQKEYDHSSTDPKEWRAGTKIRPYINDAYRITKQDNTL---------GTCRSSELSFLHVPIADCDVTSDQVVLRLAQSLCWRLIAGEVLYIHCWGGHGRTGTLVAIMLGMLYGIPKAEALKRTQLYHDLRVCPLHVPSPQTFSQRMQVLRILEKVL 254          
BLAST of mRNA_Ecto-sp6_S_contig10.542.1 vs. uniprot
Match: A0A8J2T0D3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T0D3_9STRA)

HSP 1 Score: 207 bits (526), Expect = 3.210e-56
Identity = 109/223 (48.88%), Postives = 142/223 (63.68%), Query Frame = 1
Query:  277 SFPGLEALSSID-KAGRYLGPTMESNWVLPGSLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYRAEGVTEEMWRSGDALRPYFQDVVQLLAKLGELRRADPRSVPAICAPEETDFVHFPIVDCNVADDTKVLQLAAQLAGRL-ARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQVRRVIGRVIA 939
            + P LE+   I  +  RY+GPT ESNWVLPG L+VGA+P   +D  +  LL +IL  G++TFVCLQ+EY  +   E  WRSG A+RPY+   V L A+    RR +              F+HF I DC+V +D  V   +  LA RL    EV+YLHCWGGHGR GT+ C++LH +YGL+A +AM RCQ VHD+RR+PI VGSPQT+ QR QV RV+   +A
Sbjct:   33 TLPPLESFQVISQRKQRYVGPTDESNWVLPGRLMVGAFPGVSDDRENDRLLNSILSCGITTFVCLQREYDPDA-PESAWRSGAAIRPYYPSAVALAARHHRGRRLE--------------FIHFGIEDCSVVEDDAVAAFSRSLADRLRCTDEVIYLHCWGGHGRAGTITCLLLHWLYGLNALDAMARCQFVHDLRRVPIVVGSPQTQTQRDQVCRVVASSLA 240          
BLAST of mRNA_Ecto-sp6_S_contig10.542.1 vs. uniprot
Match: A0A7S3NIH7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NIH7_9STRA)

HSP 1 Score: 203 bits (516), Expect = 5.780e-56
Identity = 109/226 (48.23%), Postives = 142/226 (62.83%), Query Frame = 1
Query:  283 PGLEALSSID-KAGRYLGPTMESNWVLPGSLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYRAEGVTEEMWRSGDALRPYFQDVVQLLAKLGELRRADPRSVPAICAPEETDFVHFPIVDCNVADDTKVLQLAAQLAGRLA-RGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQVRRVIGRVIAHRRSL 954
            P LE +  I     RY GPT ESNW +PG L+VGA+P  ++D  +A+LL  IL QG++TFVCLQ+EY      E  WR G ALRPYF   V++ A+L      DP          +  F+HF I DC+VA+D+ V   A +LA R+    +++YLHCWGGHGR GT+ C++ HL+YGL    AM RCQ VHD R+IPI+VGSPQT  Q  QV R+I R    ++SL
Sbjct:   79 PPLEPMRKIGANPTRYCGPTDESNWAIPGRLMVGAFPGMIDDVENANLLKNILNQGITTFVCLQREYNPRA-RESDWRKGLALRPYFNSAVEICAEL------DPH--------RDLHFLHFGIQDCSVAEDSAVEAFARRLARRIRDTDQIIYLHCWGGHGRAGTITCLLFHLLYGLDDKTAMRRCQLVHDCRKIPINVGSPQTRTQCDQVSRIIHRWTKKQQSL 289          
BLAST of mRNA_Ecto-sp6_S_contig10.542.1 vs. uniprot
Match: A0A6C0F341_9ZZZZ (TYR_PHOSPHATASE_2 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0F341_9ZZZZ)

HSP 1 Score: 188 bits (478), Expect = 8.140e-52
Identity = 101/222 (45.50%), Postives = 137/222 (61.71%), Query Frame = 1
Query:  274 SSFPGLEALSSIDKAGRYLGPTMESNWVLPGSLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYRAEGVTEEMWRSG-----DALRPYFQDVVQLLAKLGELRRADPRSVPAICAPEETDFVHFPIVDCNVADDTKVLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQVRRVI 924
            ++F GL  L+ I++   + GP  ESNWV+PG L+ GA+P   +D  + + L  IL  GV+ FVC+Q+EY    + EE WR         +RPYF DV +++    E +   P     +       F H PI DC+   D  V  LA  L   +  GEV+YLHCWGGHGRTG +VC+MLHLMYGL+A+EA+ERCQ +HD+R++PI V SPQT  Q+ QVRR+I
Sbjct:   41 TTFSGLVPLNEINREDIF-GPIAESNWVVPGKLIAGAFPGYTDDIENTNSLIKILNCGVTKFVCMQEEYNV-AIKEEDWRKNCYGKTSVVRPYFADVQRIM----ENKVIHPTLSTDVF---NVTFEHCPIKDCSTVADDIVFSLAKDLVKAIHDGEVVYLHCWGGHGRTGIMVCLMLHLMYGLTANEALERCQFLHDIRKMPIIVSSPQTFRQKDQVRRII 253          
BLAST of mRNA_Ecto-sp6_S_contig10.542.1 vs. uniprot
Match: A0A061SJ53_9CHLO (Map kinase phosphatase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SJ53_9CHLO)

HSP 1 Score: 185 bits (469), Expect = 1.380e-49
Identity = 93/200 (46.50%), Postives = 126/200 (63.00%), Query Frame = 1
Query:  331 GPTMESNWVLPGSLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYRAEGVTEEMWRSGDALRPYFQDVVQLLAKLGELRRADPRSVPAICAPEETDFVHFPIVDCNVADDTKVLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQVRRVIGR 930
            GPT  SNWV+ G +LVGAYPA+++D     +L T+L  G+ TFVCLQ E     V+E  WRSG ALRPY  D  ++L++  +       S  A       DF+H P+VD +V  D  +++L      R+ RGE +Y+HCWGGHGRTGT+VC++L  +YGL +  A+  CQ  HD RR P +V SPQT  QR QV+R++GR
Sbjct:   23 GPTAWSNWVIKGHVLVGAYPATIDDRETEEILTTLLETGIDTFVCLQAEVSLN-VSEARWRSGYALRPYIHDAQRILSRAHQ-------SGXARIPQTRLDFLHLPVVDGSVTTDEAIMRLRDDCCERILRGERLYIHCWGGHGRTGTLVCLILGKLYGLPSATALHLCQCYHDTRRFPQNVRSPQTPVQRAQVQRILGR 214          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.542.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4A3_9PHAE2.650e-26887.26TYR_PHOSPHATASE_2 domain-containing protein n=1 Ta... [more]
D7G3T8_ECTSI1.200e-16999.26TYR_PHOSPHATASE_2 domain-containing protein n=1 Ta... [more]
A0A7S3YH03_HETAK1.730e-7658.37Protein-tyrosine-phosphatase (Fragment) n=1 Tax=He... [more]
A0A5A8C9N1_CAFRO6.150e-6353.88TYR_PHOSPHATASE_2 domain-containing protein n=5 Ta... [more]
A0A813AT18_9DINO5.180e-6152.42Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 ... [more]
A0A7S2WTD1_9STRA9.860e-5745.23Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A8J2T0D3_9STRA3.210e-5648.88Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3NIH7_9STRA5.780e-5648.23Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A6C0F341_9ZZZZ8.140e-5245.50TYR_PHOSPHATASE_2 domain-containing protein n=1 Ta... [more]
A0A061SJ53_9CHLO1.380e-4946.50Map kinase phosphatase n=1 Tax=Tetraselmis sp. GSL... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:1274212..1278086 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score495.0
Seed ortholog evalue5.1e-137
Seed eggNOG ortholog2880.D7G3T8
Model size1836
Hectar predicted targeting categoryother localisation
Exons3
EggNOG OGs2BVII@1,2S2A7@2759
Ec32 ortholog descriptionProtein-tyrosine phosphatase-like
Ec32 orthologEc-00_007000.1
Cds size1836
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348706.6798398-CDS-Ecto-sp6_S_contig10:1274211..12744691682348706.6798398-CDS-Ecto-sp6_S_contig10:1274211..1274469Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1274212..1274469 +
1682348706.698296-CDS-Ecto-sp6_S_contig10:1274954..12753771682348706.698296-CDS-Ecto-sp6_S_contig10:1274954..1275377Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1274955..1275377 +
1682348706.7214286-CDS-Ecto-sp6_S_contig10:1276931..12780861682348706.7214286-CDS-Ecto-sp6_S_contig10:1276931..1278086Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1276932..1278086 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.542.1prot_Ecto-sp6_S_contig10.542.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig10 1274212..1278086 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig10.542.1

>prot_Ecto-sp6_S_contig10.542.1 ID=prot_Ecto-sp6_S_contig10.542.1|Name=mRNA_Ecto-sp6_S_contig10.542.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=612bp
LPKTAPPAAPSGMSGGTPAADAEAASARAAAANIMTRPLAAPEIGPPSTD
DEEEEEDQSDLDEEQEEEEVDEGLVAAVELLLAEVEALRRASSFPGLEAL
SSIDKAGRYLGPTMESNWVLPGSLLVGAYPASMNDSHHAHLLCTILLQGV
STFVCLQQEYRAEGVTEEMWRSGDALRPYFQDVVQLLAKLGELRRADPRS
VPAICAPEETDFVHFPIVDCNVADDTKVLQLAAQLAGRLARGEVMYLHCW
GGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQ
RQQVRRVIGRVIAHRRSLVPSPPPAAAATSPAPKQHQHQHQRESSPSNGG
GISGADLSPESSRKKEAGGGATTAASASTTVGGRRAWVRGRRQAFAQAPN
GVGEDVSGWLDDDNEAEGDGLSDLQRGKKLKAGAGQTSAHRRHHHHHRMP
STVSSESLSSSVGVAAAAAAAAAASSSSSSSMPRRKSFTEPYSKDDPSRG
TRMSRARRKSAPGKPPADVLAARAAAAAAAADGASSSSSSGKEDKDDGWT
KSLLSISPAKGINCRQTPSVAACSTQGDDAAAAASPGSCTGVERCVTRSS
GGGGGTSYHAR*
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mRNA from alignment at Ecto-sp6_S_contig10:1274212..1278086+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig10.542.1 ID=mRNA_Ecto-sp6_S_contig10.542.1|Name=mRNA_Ecto-sp6_S_contig10.542.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3875bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:1274212..1278086+ (Ectocarpus species6 EcLAC_371)
TTGCCAAAGACAGCACCACCGGCAGCACCATCAGGAATGAGCGGCGGGAC GCCAGCAGCAGACGCAGAGGCAGCATCGGCAAGAGCAGCAGCAGCCAACA TCATGACGAGACCGCTAGCTGCGCCCGAGATAGGTCCTCCCTCGACCGAT GACGAGGAAGAGGAGGAGGACCAGTCCGACTTGGACGAGGAGCAAGAGGA GGAAGAAGTCGACGAGGGGCTGGTCGCAGCCGTTGAACTTTTGCTGGCGG AGGTAGAGGTGAGGGTGTGCGTTGGCGCTTTTTTTTCTTCTTTTTCCCCG CACACACCCAGGACCGCCCTCTTCTCCTCTATTTTCGCAGCCGTTAGGCT TGTGGGTGCACCTCTCGGTGGAACATCGAAGCGTATGTACCAATCCGCTA CTGGACAGCAGGCCGCTGCCCTCTCTCTCTCCCGGTCGGCGCGTCGCTTT GCGGTTTTGTCTTGTGTGCTGCAAAAAATGGAAGGACATTCTTCATTCGT TGTACTTCTGTGTACATGACGTGATAAAATGCACCTATTCTATGTAGCAG TAATACTCCAGTTCATTTAAGCAGTAAACACATGTTCACCCCACCTCTCC GAATTCTGACTGGCCTCGAAAGGGAGGGGGCGGGGGGGGGGCATGCATGC CCATGCCCCCTCGCCGGTAACCGTTGATGCCACTCATGCACACATGCACA CCCACCACTTCTTCTCCCGTTCTTCCCACCCGCAACAACACAGGCGCTGC GAAGGGCGAGCTCCTTCCCCGGCCTGGAGGCGCTGTCCAGCATCGACAAG GCCGGGCGGTACCTCGGTCCCACCATGGAGTCGAACTGGGTGCTCCCGGG GAGTCTGCTCGTGGGCGCGTACCCGGCGTCCATGAACGACAGCCACCACG CCCACCTCCTCTGCACCATCCTGCTGCAGGGAGTCTCGACCTTCGTGTGC CTGCAGCAGGAGTATCGGGCGGAGGGCGTGACGGAGGAGATGTGGAGGTC GGGCGACGCGCTCAGGCCGTACTTCCAGGACGTGGTGCAGCTGTTGGCGA AGCTCGGGGAGCTCAGGAGGGCAGACCCGAGGTCCGTGCCCGCCATCTGC GCGCCGGAGGAGACCGACTTCGTGCACTTCCCGATCGTCGACTGCAACGT CGCCGACGATACCAAGGTATGCTTTGTTTGTGAATGCAGCATATAATACA TGCCACCTATTGACAGTAATTATTTTTTCACTCCATCGCTCGTGGGATGT GGGATGCTTGTACATATGCATTCTCCGGAGCACAAGTACATAGCATTCAT GTTTATTTATTTTTTATTTTTTATTTTTTATTTTTTCCCATACAGTATTC TTACGTCGTAGTCCAGCGTTGTAGGTACGCACACCACGTGCACCCATTGC GTGCGTCGTGATGATGCGTGTTTCTTCGAAACGCCGCATTTGTGGTACGG ATTGCAGTCAAGGGTTCGCTGATGTATCACGTGGCAGCACGGCGTGCAAG CAACCATTGCCGTGTGTGCGAATCTACTTGTTTCGGAACGCCGCGCGTGT GAGGCATCATGCCTATGACGCACGCATCTGCATGTAGTCAAAAGGCTCGC CGCTGTGCGCGGCGCGGAATAACCTCCAAACACAGAGTGATTGCCCCTCC ATATGTGTTCAGTACTGCTGCTCTGTGTGGCCGGTTATCTTTCTGGCCTG CTGCTGCGACTGCTGGGGGGTTCTCGTCCCCCCGGTGAAGCCCCACCAAC CGCTCAGAGGGTGTACCAGTATCTAAAACCGCCATGGAACTGCTTGTCTT GTTCGCGACTTGACACAACTCAAGTAAACGGGACTTTGCAGGCTTGCTGC TGCGGGGGTAGCGTGTGTGTGTGTGACCTTGTCGCTTCTCTTATCTGAAG GTAGATACTACAAGCAAACAACGCGCATTTGCATTTTATTTGTACGGCAG CAGCACACTTTGCTGCCCCCTATTCCCACGGGCTGCTGTCGGTCGGCAAC CGTTGAAGACCTGTTAATAAAAAAAAAGAAACACCCCATCACATCTATAC ATTTGCGTCCAGCAAGCGGGGGGCGGGGCTTGCAGTGCAAGACAGCTGCC GCTCTTTGTTGGCAAGCAACGCGAACGAACGTATACTACCCGTATTTGTG GTTGAGTGTTTCACACCTAAGGACGGATTGACGCGGTTTGTTGCTGGTGC CACTTCTGAGTACCACGTGCAGTAGCTCATTGGGCAGTTTCGTCGCGAAG AAGAACAGCATCTCGTCACTCGTTACCGAACACGATCAAGCGGGCAGGGT GTTTGGCTTCGCGAAGGATGCTTTTTTTTTTTTGTTCTTCGTGGCACACA GCAGCAGCAGGCGGGTGCGCGGTGACGTTAGTTGCACTACAACGTTACCT CGGCGGGGATGACCATACCCGTTGGCGCCATGCGGCACTACTTCGAGCCG ATTTAGGGCATGTGAGGGTGCTCCTCCCGTCTGCAGGGTATCATGAAAGC ACGCAAGGGTGTAAAGCACCCCACGTTACATCGCTCTTGCTATTCACGCA TTCGCAGCGTATGTACTTAGACCTTGCGCGACACCGGACACTTGGAACAC CCCATCCCCGTCTGCCCCGCCATTTTTGTCACCTTTGACTTGCCTTTGAT GCCCACGTTGACACCGTATCCCCCCCCCCCCCCAACAATTCTCTTCCCGA TTTATGCCACACGAAAAAAGGTACTCCAACTCGCCGCACAGTTGGCCGGC CGGCTTGCCCGCGGCGAGGTGATGTACCTGCACTGCTGGGGAGGGCACGG CCGCACGGGCACCGTGGTGTGCATCATGCTGCACCTCATGTACGGCCTCA GCGCCGACGAGGCCATGGAGCGTTGCCAGCACGTGCACGACGTCCGGCGC ATCCCGATAAGCGTGGGGTCCCCGCAGACGGAGGCGCAGCGTCAGCAGGT GCGCCGCGTCATCGGGCGCGTCATCGCCCACCGCCGGTCTCTCGTGCCGT CTCCGCCGCCGGCAGCGGCGGCCACCTCTCCGGCACCGAAGCAGCACCAG CACCAGCACCAGCGGGAGTCGTCGCCATCCAACGGCGGCGGCATCAGCGG CGCCGACCTCTCCCCGGAGAGCAGCAGGAAGAAGGAGGCCGGAGGAGGCG CGACGACCGCTGCTTCTGCTTCGACTACCGTGGGCGGTCGCCGAGCGTGG GTGCGGGGGCGGCGGCAGGCGTTCGCCCAGGCGCCCAACGGCGTTGGCGA AGACGTGTCGGGCTGGCTGGACGACGACAACGAAGCCGAAGGGGATGGGC TCAGCGACCTACAGCGTGGAAAGAAGCTCAAGgcGGGAGCGGGCCAGACC AGCGCCCACCGCCGCCACCACCACCACCACCGCATGCCTTCCACGGTGTC GTCGGAGTCGTTGTCGTCCTCGGTAGGAGTAGCGGCGGCGGCGGCAGCGG CGGCAGCGGCGTCGTCGTCGTCGTCGTCGTCGATGCCGCGCCGAAAGTCG TTCACGGAGCCCTACTCGAAGGACGACCCGTCGCGAGGGACGAGGATGAG CCGCGCGCGGCGGAAGTCGGCGCCAGGCAAGCCACCGGCCGACGTGCTTG CGGCACGCGCTGCTGCTGCTGCTGCTGCTGCTGATGGCGCGTCGTCGTCG TCGTCGTCGGGCAAAGAGGACAAGGATGACGGTTGGACAAAGTCGCTACT GTCGATCAGTCCCGCGAAGGGGATCAACTGCCGCCAGACGCCGTCGGTGG CGGCGTGCTCGACGCAAGGGGATGATGCCGCGGCCGCCGCGTCCCCGGGT TCGTGCACGGGGGTGGAGCGGTGCGTGACGAGGTCTAGCGGCGGCGGCGG GGGAACCTCCTACCACGCGAGGTGA
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig10:1274212..1278086+

>mRNA_Ecto-sp6_S_contig10.542.1 ID=mRNA_Ecto-sp6_S_contig10.542.1|Name=mRNA_Ecto-sp6_S_contig10.542.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1836bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:1274212..1278086+ (Ectocarpus species6 EcLAC_371)
TTGCCAAAGACAGCACCACCGGCAGCACCATCAGGAATGAGCGGCGGGAC
GCCAGCAGCAGACGCAGAGGCAGCATCGGCAAGAGCAGCAGCAGCCAACA
TCATGACGAGACCGCTAGCTGCGCCCGAGATAGGTCCTCCCTCGACCGAT
GACGAGGAAGAGGAGGAGGACCAGTCCGACTTGGACGAGGAGCAAGAGGA
GGAAGAAGTCGACGAGGGGCTGGTCGCAGCCGTTGAACTTTTGCTGGCGG
AGGTAGAGGCGCTGCGAAGGGCGAGCTCCTTCCCCGGCCTGGAGGCGCTG
TCCAGCATCGACAAGGCCGGGCGGTACCTCGGTCCCACCATGGAGTCGAA
CTGGGTGCTCCCGGGGAGTCTGCTCGTGGGCGCGTACCCGGCGTCCATGA
ACGACAGCCACCACGCCCACCTCCTCTGCACCATCCTGCTGCAGGGAGTC
TCGACCTTCGTGTGCCTGCAGCAGGAGTATCGGGCGGAGGGCGTGACGGA
GGAGATGTGGAGGTCGGGCGACGCGCTCAGGCCGTACTTCCAGGACGTGG
TGCAGCTGTTGGCGAAGCTCGGGGAGCTCAGGAGGGCAGACCCGAGGTCC
GTGCCCGCCATCTGCGCGCCGGAGGAGACCGACTTCGTGCACTTCCCGAT
CGTCGACTGCAACGTCGCCGACGATACCAAGGTACTCCAACTCGCCGCAC
AGTTGGCCGGCCGGCTTGCCCGCGGCGAGGTGATGTACCTGCACTGCTGG
GGAGGGCACGGCCGCACGGGCACCGTGGTGTGCATCATGCTGCACCTCAT
GTACGGCCTCAGCGCCGACGAGGCCATGGAGCGTTGCCAGCACGTGCACG
ACGTCCGGCGCATCCCGATAAGCGTGGGGTCCCCGCAGACGGAGGCGCAG
CGTCAGCAGGTGCGCCGCGTCATCGGGCGCGTCATCGCCCACCGCCGGTC
TCTCGTGCCGTCTCCGCCGCCGGCAGCGGCGGCCACCTCTCCGGCACCGA
AGCAGCACCAGCACCAGCACCAGCGGGAGTCGTCGCCATCCAACGGCGGC
GGCATCAGCGGCGCCGACCTCTCCCCGGAGAGCAGCAGGAAGAAGGAGGC
CGGAGGAGGCGCGACGACCGCTGCTTCTGCTTCGACTACCGTGGGCGGTC
GCCGAGCGTGGGTGCGGGGGCGGCGGCAGGCGTTCGCCCAGGCGCCCAAC
GGCGTTGGCGAAGACGTGTCGGGCTGGCTGGACGACGACAACGAAGCCGA
AGGGGATGGGCTCAGCGACCTACAGCGTGGAAAGAAGCTCAAGgcGGGAG
CGGGCCAGACCAGCGCCCACCGCCGCCACCACCACCACCACCGCATGCCT
TCCACGGTGTCGTCGGAGTCGTTGTCGTCCTCGGTAGGAGTAGCGGCGGC
GGCGGCAGCGGCGGCAGCGGCGTCGTCGTCGTCGTCGTCGTCGATGCCGC
GCCGAAAGTCGTTCACGGAGCCCTACTCGAAGGACGACCCGTCGCGAGGG
ACGAGGATGAGCCGCGCGCGGCGGAAGTCGGCGCCAGGCAAGCCACCGGC
CGACGTGCTTGCGGCACGCGCTGCTGCTGCTGCTGCTGCTGCTGATGGCG
CGTCGTCGTCGTCGTCGTCGGGCAAAGAGGACAAGGATGACGGTTGGACA
AAGTCGCTACTGTCGATCAGTCCCGCGAAGGGGATCAACTGCCGCCAGAC
GCCGTCGGTGGCGGCGTGCTCGACGCAAGGGGATGATGCCGCGGCCGCCG
CGTCCCCGGGTTCGTGCACGGGGGTGGAGCGGTGCGTGACGAGGTCTAGC
GGCGGCGGCGGGGGAACCTCCTACCACGCGAGGTGA
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