mRNA_Ecto-sp6_S_contig10.541.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.541.1 vs. uniprot
Match: A0A6H5LN99_9PHAE (Peptidase A1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN99_9PHAE) HSP 1 Score: 808 bits (2087), Expect = 3.160e-282 Identity = 429/534 (80.34%), Postives = 439/534 (82.21%), Query Frame = 1
Query: 1 MTPPQEPDSLDKPCGHQNQGQQHNRHQAETGRHRSTQXXXXXXXXXXXXXXXGQEPLSGASPVLVSRRLLSPEDGEPMLSLPLERRRPGDSASSDEPSRDHRRGDHHRLRSQQLQAWLLQREXXXXXXXXXXSLPQPHANQTSYYSTEMGRRRRRQLLPGTARFPLRWSEGTHFVYAHVGTPPQRVSLIVDTGSFTLAFPCVGCDKCRPRARTPFWDPGASATAAELSCDECHGDYTCSEFEPKCTYRQSYSEGSAWTATQMVDVLRLGGEELSEEDGGGKGNGGYGWPKLSFGCIRKQSGLFDKQ--------------------------DRKFSICFSENGGNLVLGGYDPELLVPGASHQYTTAHFARGFFAVEVFGVALGGRSIVTAETLELFSLGTGTIVDSGTTDMYLPVEVADAFSEAWEAATGEPYAMCPGTSFCLELTPPEAAELPVVSFTLADGVEVRVSPLQYLEKKGTTGEPHKTQYAPRIYLTESTGAVLGANVMLDRNVLFDLANERIGFADARCEKGG 1524
MTPPQEPD LDKPCGHQNQGQQHNRHQAETGR+RSTQ GQEP SGASPVLVSRRLLSPEDGEPMLSLPLERRRPGD+ASS XXXXXXXXXX LPQ HANQTSY QLLPGTAR PLRWSEGTHFVYAHVGTPPQRVSLI+DTGSF LAFPCVGCDKCRPR+RTPFWDPGASATAAELSCDECHGDYTCSEFEP+CTYRQSYSEGSAWTATQMVDV RLGGE LSEEDGGG+GNGGYGWPKLSFGCIRKQ G+FDKQ DRKFSICFSENGGNLVLGGYDPELLVPGASHQYTTA FARGFFAVEV GVALGGRSIVTAETLELFSLGTGTIVDSGTTDMYLPVEVADAFSEAWEAATGEPYAMCPG SFCL+LTPPEAAELPVVSFTLADGVEVRVSPLQYLEKK T G+PHKT YAPRIYLTESTGAVLGANVMLDRNVLFDLANERIGFADARCE+GG
Sbjct: 1 MTPPQEPDPLDKPCGHQNQGQQHNRHQAETGRYRSTQQHQQQQ---------GQEPFSGASPVLVSRRLLSPEDGEPMLSLPLERRRPGDNASSXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXLPQSHANQTSYXXXXXXXXXXXQLLPGTARIPLRWSEGTHFVYAHVGTPPQRVSLILDTGSFMLAFPCVGCDKCRPRSRTPFWDPGASATAAELSCDECHGDYTCSEFEPRCTYRQSYSEGSAWTATQMVDVFRLGGEGLSEEDGGGEGNGGYGWPKLSFGCIRKQLGMFDKQEPDGIIGMGPNVISPAWSLTARESPQDRKFSICFSENGGNLVLGGYDPELLVPGASHQYTTAQFARGFFAVEVLGVALGGRSIVTAETLELFSLGTGTIVDSGTTDMYLPVEVADAFSEAWEAATGEPYAMCPGNSFCLKLTPPEAAELPVVSFTLADGVEVRVSPLQYLEKKETAGKPHKTYYAPRIYLTESTGAVLGANVMLDRNVLFDLANERIGFADARCERGG 522
BLAST of mRNA_Ecto-sp6_S_contig10.541.1 vs. uniprot
Match: D7G3T7_ECTSI (Peptidase A1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T7_ECTSI) HSP 1 Score: 615 bits (1586), Expect = 4.330e-218 Identity = 309/330 (93.64%), Postives = 312/330 (94.55%), Query Frame = 1
Query: 232 MLSLPLERRRPGDSASSDEPSRDHRRGDHHRLRSQQLQAWLLQREXXXXXXXXXXSLPQPHANQTSYYSTEMGRRRRRQLLPGTARFPLRWSEGTHFVYAHVGTPPQRVSLIVDTGSFTLAFPCVGCDKCRPRARTPFWDPGASATAAELSCDECHGDYTCSEFEPKCTYRQSYSEGSAWTATQMVDVLRLGGEELSEEDGGGKGNGGYGWPKLSFGCIRKQSGLFDKQDRKFSICFSENGGNLVLGGYDPELLVPGASHQYTTAHFARGFFAVEVFGVALGGRSIVTAETLELFSLGTGTIVDSGTTDMYLPVEVADAFSEAWEAATGE 1221
MLSLPL RRRPGD+ASSDE SRDHR HRLRSQQLQAWLLQREXXXXXX SLPQPHANQTSYYS EMGRRRRRQLLPGTARFPLRWSEGTHFVYAHVGTPPQRVSLIVDTGSFTLAFPCVGCDKCRPR+RTPFWDPGASATAAELSCDECHGDYTCSEFEPKCTY SY EG WTA QMVDVLRLGGEELSEEDGGG+GNGGY WPKLSFGCIRKQSGLFDKQDRKFSICFSENGGNLVLGGYDPELLVPGASHQYTTAHFARGFFAVEVFGVALGGRSIVTAETLELFSLGTGTIVDSGTTDMYLPVEVADAFSEAWEAATGE
Sbjct: 1 MLSLPLGRRRPGDNASSDESSRDHRXXXXHRLRSQQLQAWLLQREXXXXXX----SLPQPHANQTSYYSKEMGRRRRRQLLPGTARFPLRWSEGTHFVYAHVGTPPQRVSLIVDTGSFTLAFPCVGCDKCRPRSRTPFWDPGASATAAELSCDECHGDYTCSEFEPKCTYSHSYREGRGWTAIQMVDVLRLGGEELSEEDGGGEGNGGYDWPKLSFGCIRKQSGLFDKQDRKFSICFSENGGNLVLGGYDPELLVPGASHQYTTAHFARGFFAVEVFGVALGGRSIVTAETLELFSLGTGTIVDSGTTDMYLPVEVADAFSEAWEAATGE 326
BLAST of mRNA_Ecto-sp6_S_contig10.541.1 vs. uniprot
Match: A0A6H5JRT4_9PHAE (Peptidase A1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRT4_9PHAE) HSP 1 Score: 289 bits (739), Expect = 3.530e-84 Identity = 162/378 (42.86%), Postives = 205/378 (54.23%), Query Frame = 1
Query: 460 RRQLLPGTARFPLRWSEGTHFVYAHVGTPPQRVSLIVDTGSFTLAFPCVGCDKCRPRARTPFWDPGASATAAELSCDECHGDYTCSEFEPKCTYRQSYSEGSAWTATQMVDVLRLGGEELSEEDGGGKGNGGYGWPKLSFGCIRKQSGLFDKQ--------------------------DRKFSICFSENGGNLVLGGYDPELLVPGASHQYTTAHFARGFFAVEVFGVALGGRSIVTAETLELFSLGTGTIVDSGTTDMYLPVEVADAFSEAWEAATGEPYAMCPGTSFCLELTPPEAAELPVVSFTLADGVEVRVSPLQYLEKKGTTGEPHKTQYAPRIYLTESTGAVLGANVMLDRNVLFDLANERIGFADARCE 1515
RR L PL GTHF Y + GTPPQRVS+I+DTGS AFPC GC C P WD S ++ ++C++CHG + C + +C + Q YSEGS+WTA Q+ DVL +G L + + Y + FGCI Q+GLF Q +R FS+CF +NGG +VLGGYD L PG YT + + G+F V+V + + SI A+ +F G G IVDSGTTD YLP VA FS AWE ATG PYA C FC+ LT E LP ++ + G+EV V P Y++ G YAPRIYLTES G VLGANVMLD NV+FD N +GFA+ C+
Sbjct: 107 RRSLYLSFEDTPLFPGWGTHFAYVYAGTPPQRVSVIIDTGSHFTAFPCSGCKNCGSHT-DPHWDQSKSTSSHIVTCEDCHGSFRCQR-DKRCGFSQRYSEGSSWTAYQVEDVLWVGELTLQQSEKINHDESAYA-VEFMFGCIESQTGLFKTQLADGIMGMSADSHTLVWQLAKAGKIKERTFSLCFGKNGGTMVLGGYDNRLNKPGHEMVYTPSTKSSGWFTVKVTDITVNQVSI--AKDAAIFQKGKGIIVDSGTTDTYLPKSVAKGFSAAWERATGSPYANCKDNHFCMILTSAELEALPTITIHMDGGLEVNVRPSGYMDALGKDNA-----YAPRIYLTESMGGVLGANVMLDHNVVFDFDNHSVGFAEGVCD 474
BLAST of mRNA_Ecto-sp6_S_contig10.541.1 vs. uniprot
Match: A0A6H5LNK8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LNK8_9PHAE) HSP 1 Score: 271 bits (694), Expect = 3.880e-81 Identity = 158/370 (42.70%), Postives = 200/370 (54.05%), Query Frame = 1
Query: 493 PLRWSEGTHFVYAHVGTPPQRVSLIVDTGSFTLAFPCVGCDKCRPRARTPFWDPGASATAAELSCDE---CHGDYTCSEFEPKCTYRQSYSEGSAWTATQMVDVLRLGGEELSEEDGGGKGNGGYGWPKLSFGCIRKQSGLFDKQ--------------------------DRKFSICFSENGGNLVLGGYDPELLVPGASHQYTTAHFARGFFAVEVFGVALGGRSIVTAETLELFSLGTGTIVDSGTTDMYLPVEVADAFSEAWEAATGEPYAMCPGTSFCLELTPPEAAELPVVSFTLADGVEVRVSPLQYLEKKGTTGEPHKTQYAPRIYLTESTGAVLGANVMLDRNVLFDLANERIGFADARCE 1515
PL GTHF Y + GTPPQR S+I++TGS AFPC C C P+WDP S+TA ++CDE CHG Y C + + KC + Y+E S+W A Q+ D+L +G LS+ K + +FGCI +GLF Q +RKFS+CFSE GG +V+GGYDP L PG+ QYT + V+V V L G SI T ++ F GTG V SGTTDMYLP VA+ FS AWEAATG PYA C FC+ T + LPV++ + GVEV V P Y++ + YAPRIYLTES G LGA + D NV+FD N +GFAD C+
Sbjct: 99 PLFRGYGTHFAYIYAGTPPQRASVIINTGSHFSAFPCSECKNCGNHT-DPYWDPSQSSTAHIVTCDETERCHGAYRC-QSDKKCVLTERYTERSSWRAKQVDDLLWVGELTLSDSQ---KHDDSAFSVDFTFGCIESLTGLFRTQLADGIMGLNADSRTLITQLATAGKISERKFSLCFSETGGTMVIGGYDPLLNKPGSEMQYTPSTGETSAPTVKVTDVTLNGVSITTDASV--FQKGTGIKVVSGTTDMYLPRAVAEGFSAAWEAATGSPYATCKSNEFCMTRTTADLETLPVLTIHMDGGVEVNVQPEAYMD----ASSDDENAYAPRIYLTESMGGELGAILFRDHNVVFDYDNHVVGFADGACD 457
BLAST of mRNA_Ecto-sp6_S_contig10.541.1 vs. uniprot
Match: A0A835ZHP7_9STRA (Aspartic peptidase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHP7_9STRA) HSP 1 Score: 239 bits (611), Expect = 2.640e-69 Identity = 145/367 (39.51%), Postives = 190/367 (51.77%), Query Frame = 1
Query: 493 PLRWSEGTHFVYAHVGTPPQRVSLIVDTGSFTLAFPCVGCDKCRPRARTPFWDPGASATAAELSCDECHGDYTCSEFEPKCTYRQSYSEGSAWTATQMVDVLRLGGEELSEEDGGGKGNGGYGWPKLSFGCIRKQSGLFDKQ--------------------------DRKFSICFSENGGNLVLGGYDPELLVPGASHQYTTAHFARGFFAVEVFGVALGGRSIVTAETLELFSLGTGTIVDSGTTDMYLPVEVADAFSEAWEAATGEPYAMCPGTSFCLELTPPEAAELPVVSFTLADGVEVRVSPLQYLEKKGTTGEPHKTQYAPRIYLTESTGAVLGANVMLDRNVLFDLANERIGFADARCE 1515
PL GTH Y +VGTPPQRVS+I+DTGS AFPC GC C + +WD S+TA C +CHG++ C + +C + QSYSEGS+W+A Q++D L G L + FGCI Q+GLF+ Q KFS+CF GG +VLGG +P L+ A QYT G+F V++ + +GG SI ++ G G IVDSGTTD YLP AD F W+A TG Y P ++L+ + A LP +F A GV V V P Y++ + Y PR+YL E GAVLGAN M D +V+FD AN+R+GFA A C+
Sbjct: 7 PLIPGYGTHIAYVYVGTPPQRVSVILDTGSHFTAFPCKGCKACGDHTDS-YWDFDLSSTATLTKCPDCHGNFNCGANQ-RCVFSQSYSEGSSWSAFQVIDKLYTGLTTLQDTPPDDAALS----IDFMFGCINSQTGLFNTQLADGIMGMSVSEFTLVWQLHQKGLLAQEKFSLCFDYGGGVMVLGGVEP--LLRTAPMQYTPNLHDEGWFTVDLQDILIGGESINVDPAQ--YNRGKGVIVDSGTTDTYLPSACADGFRAQWQALTGMAYDNKP-----MKLSKAQFAALPTFTFVFAGGVRVDVKPEAYMD---VAADHDGAGYTPRMYLDERDGAVLGANFMRDHDVVFDHANKRVGFAPANCD 355
BLAST of mRNA_Ecto-sp6_S_contig10.541.1 vs. uniprot
Match: A0A835ZJF3_9STRA (Aspartic peptidase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJF3_9STRA) HSP 1 Score: 235 bits (600), Expect = 5.050e-65 Identity = 145/369 (39.30%), Postives = 186/369 (50.41%), Query Frame = 1
Query: 511 GTHFVYAHVGTPPQRVSLIVDTGSFTLAFPCVGCDKCRPRARTPFWDPGASATAAELSCDECHGDYTCSEFEPKCTYRQSYSEGSAWTATQMVDVLRLGGEELSEEDGGGKGNGGYGWPKLSFGCIRKQSGLFDKQ--------------------------DRKFSICFSENGGNLVLGGYDPELLVPGASHQYTTAHFARGFFAVEVFGVALGGRSIVTAETLELFSLGTGTIVDSGTTDMYLPVEVADAFSEAWEAATGEPYAMCPGTSFCLELTPPEAAELPVVSFTLADGVEVRVSPLQYLEKKG---------TTGEPHKTQYAPRIYLTESTGAVLGANVMLDRNVLFDLANERIGFADARC 1512
GTH Y +VGTPPQRVS+I+DTGS AFPC GC C P+WD AS+TA +C C G +TC + +C Y QSYSEGS+W A Q++D + G ++ G G+ +FGCI Q+GLF+ Q S+CF GG +VLGG DP L+ A Q+T + G+F V++ V +GG SI +++ G G IVDSGTTD YLP A F AW AATG Y+ S L E A LP ++F G V V P Y+ + + E Y R+YL E+ GAVLGAN M D +V FD AN R+GFA A C
Sbjct: 8 GTHIAYLYVGTPPQRVSVIIDTGSHLTAFPCKGCQACGKHT-DPYWDFAASSTAKITTCAACKGTFTCGS-QDRCIYSQSYSEGSSWHAFQVLDTVFAGPASAADVAPAAAAASGVGF---AFGCIDSQTGLFNTQLADGIMGMSASESTLVWTLHRAHRVPALALSLCFGTGGGAMVLGGSDP--LLHTAPMQFTPSLKRTGWFTVDLIDVQIGGASI--GAPAAVYARGKGAIVDSGTTDTYLPEACAARFRAAWRAATGRDYS----ESAPQRLARAELAALPALTFVFRGGARVDVLPEAYMVARAALTLTRLAASAQEKVGKSYVARVYLDEANGAVLGANFMRDHDVFFDQANSRVGFAPANC 363
BLAST of mRNA_Ecto-sp6_S_contig10.541.1 vs. uniprot
Match: A0A7S3YC94_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YC94_HETAK) HSP 1 Score: 218 bits (556), Expect = 1.560e-61 Identity = 141/363 (38.84%), Postives = 185/363 (50.96%), Query Frame = 1
Query: 511 GTHFVYAHVGTPPQRVSLIVDTGSFTLAFPCVGCDKCRPRARTPFWDPGASATAAELSCDECHGDYTCSEFEPKCTYRQSYSEGSAWTATQMVDVLRLGGEELSEEDGGGKGNGGYGWPKLSFGCIRKQSGLFDKQ--------------------------DRKFSICFSENGGNLVLGGYDPELLVPGASHQYTTAHFARGFFAVEVFGVALGGRSIVTAETLELFSLGTGTIVDSGTTDMYLPVEVADAFSEAWEAATGEPYAMCPGTSFCLELTPPEAAELPVVSFTLADGVEVRVSPLQYLEKKGTTGEPHKTQYAPRIYLTESTGAVLGANVMLDRNVLFDLANERIGFADARCEKG 1521
GTHF Y +VGTPPQRVS+IVDTGS AFPC GC C P++D +S+T +L C EC S KC + QSYSEGS+W A Q++D G E +E N L FGC ++GLF Q F++CF+E GG + LGG D L + Q+ G+F V + + +GG + + ++ G GTIVDSGTTD YL VA+ F W AA+G Y+ T L+ + A LP V++ +GVEV V P Y+EK GT +Y PRIYL ES+G VLGAN M +V FD N R+GFA++ C+ G
Sbjct: 67 GTHFAYVYVGTPPQRVSVIVDTGSHYTAFPCKGCSGCGSHT-DPYFDLSSSSTGHQLGCHECQSTSCASG---KCQFSQSYSEGSSWHAYQVIDRFYTGVEVFAEIPAA---NADLAIDFL-FGCQSSETGLFRTQLADGIMGMSMSHFSLVDALHKAGAVGHNNFAMCFNEEGGVMSLGGVDTRL--HDSPMQFVPLTQNTGWFTVSLKEIRVGGEKLNVGASN--YNGGKGTIVDSGTTDTYLNRHVANEFKAKWHAASGMTYSNAAKT-----LSEAQLAALPSVTYVFGNGVEVVVRPESYMEKTGTN------KYTPRIYLDESSGNVLGANFMDRHDVFFDEENGRVGFAESSCDMG 406
BLAST of mRNA_Ecto-sp6_S_contig10.541.1 vs. uniprot
Match: A0A8J2SW55_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SW55_9STRA) HSP 1 Score: 216 bits (551), Expect = 2.950e-61 Identity = 143/394 (36.29%), Postives = 189/394 (47.97%), Query Frame = 1
Query: 454 RRRRQLLPGTAR---FPLRWSEGTHFVYAHVGTPPQRVSLIVDTGSFTLAFPCVGCDKCRPRARTPFWDPGASATAAELSCDECHGDYTCSEFEPKCTYRQSYSEGSAWTATQMVDVLRLGGEELSEEDGGGKGNGGYGW--PKLSFGCIRKQSGLFDKQD--------------------------RKFSICFSENGGNLVLGGYD------PELLVPGASHQYTTAHFARGFFAVEVFGVALGGRSIVTAETLELFSLGTGTIVDSGTTDMYLPVEVADAFSEAWEAATGEPYAMCPGTSFC---LELTPPEAAELPVVSFTLADGVEVRVSPLQYLEKKGTTGEPHKTQYAPRIYLTESTGAVLGANVMLDRNVLFDLANERIGFADARCE 1515
RRRR P + PL GTH+ + +VGTP QRVS+IVDTGS AFPC GC C P+++P S+T L C +C C C QSY+EGS+W A QM D +GG++ S G W FGC ++GLF Q F++CF + GG + LGG D P VP A + G+F V++ V L G+SI E+ ++ G GTIVDSGTTD YLP A+ F AW AA G P + L T +AA+ P +++ A GV+V V Y+EK G ++ PR+YLTE++G VLGAN M D + FD R+GFA A C+
Sbjct: 75 RRRRLQAPDAHQGGLTPLFMGIGTHYAHVYVGTPAQRVSVIVDTGSHHTAFPCAGCKSCGKHT-DPYFEPSRSSTLVRLDCSKCVAAARC--VAKTCQVSQSYTEGSSWKAVQMKDNYYVGGDDASAPP-----RAGEKWIATPFVFGCQTYETGLFRTQKADGIMGMSMHAQTLVPTMRSANKLGHNSFAMCFMQGGGTMALGGVDTRIHKEPMQFVPLAKNS--------GWFTVQLKDVLLNGKSIGVPEST--WNTGKGTIVDSGTTDTYLPRRAAEQFKRAWHAAMG------PSPKYANSKLAYTAAQAAKFPTITYVFAGGVKVDVEGKAYMEKAGAG------RWVPRVYLTEASGTVLGANFMEDHDCFFDAERRRVGFARADCD 438
BLAST of mRNA_Ecto-sp6_S_contig10.541.1 vs. uniprot
Match: A0A7S2WCI1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WCI1_9STRA) HSP 1 Score: 211 bits (536), Expect = 4.640e-58 Identity = 133/374 (35.56%), Postives = 188/374 (50.27%), Query Frame = 1
Query: 493 PLRWSEGTHFVYAHVGTPPQRVSLIVDTGSFTLAFPCVGCDKCRPRARTPFWDPGASATAAELSCDECHGDYTCSEFEPKCTYRQSYSEGSAWTATQMVDVLRLGGEELSEEDGGGKGNGGYGWPKLSFGCIRKQSGLFDKQD--------------------------RKFSICFSENGGNLVLGGYDPELLVPGASHQ----YTTAHFARGFFAVEVFGVALGGRSIVTAETLELFSLGTGTIVDSGTTDMYLPVEVADAFSEAWEAATGEPYAMCPGTSFCLELTPPEAAELPVVSFTL----ADGVEVRVSPLQYLEKKGTTGEPHKTQYAPRIYLTESTGAVLGANVMLDRNVLFDLANERIGFADARC 1512
PL GTH+ + +VGTPPQRVS+I+DTGS AFPC GC C P + P S+T + L C+ C C + KC + QSY+EGS+W A QM DVL LGG D + FGC ++GLF Q + F++CF + GG + +GG D A HQ + + G+F V++ G+ +G S+ + ++ G G IVDSGTTD YLP + A AF +AW + +G Y + + L A +P ++F + VEV + P Y+E++G+ +Y PR+YLTE +G VLGAN M D NVLFD ++R+GFA + C
Sbjct: 79 PLFEGIGTHYAFIYVGTPPQRVSVIMDTGSHLTAFPCEGCKTCGSHT-DPHFKPSGSSTNSYLPCNACKAGARC--VKGKCEFGQSYTEGSSWKAHQMEDVLWLGGSSSDTHDPASSIGHALA-VRFMFGCQFSETGLFRTQRADGIMGLSSSPTTLIPQVKNANLIEAKTFALCFMKGGGMMTIGGAD------SAIHQEPMKFVPLAKSSGWFTVKLKGLRVGDVSLSVSGNS--YNSGKGVIVDSGTTDTYLPKKAAGAFKKAWRSLSGREYG-----NGKMTLDAENFARIPTITFVFQGAHGEDVEVHMRPNAYMEQQGSD------KYVPRVYLTEGSGMVLGANFMQDHNVLFDAEHKRVGFARSDC 429
BLAST of mRNA_Ecto-sp6_S_contig10.541.1 vs. uniprot
Match: A0A7R9U4S4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4S4_9STRA) HSP 1 Score: 191 bits (486), Expect = 6.590e-52 Identity = 137/381 (35.96%), Postives = 184/381 (48.29%), Query Frame = 1
Query: 493 PLRWSEGTHFVYAHVGTPPQRVSLIVDTGSFTLAFPCVGCDKCRPRARTPFWDPGASATAAELSCD----ECHGD------YTCSEFEPKCTYRQSYSEGSAWTATQMVDVLRLGGEELSEEDGGGKGNGGYGWPKLSFGCIRKQSGLFDKQ--------------------------DRKFSICFSENGGNLVLGGYDPELLVPGASHQYTTAHFARGFFAVEVFGVALGGRSIVTAETLELFSLGTGTIVDSGTTDMYLPVEVADAFSEAWEAATGEPYAMCPGTSFCLELTPPEAAELPVVSFTLA-DG----VEVRVSPLQYLEKKGTTGEPHKTQYAPRIYLTESTGAVLGANVMLDRNVLFDLANERIGFADARC 1512
PL GTHF Y VGTP QRVS+IVDTGS AFPC GC+ C P+++ S+++ EL C +C G +CS KC QSY+EGS W+A Q+ D++ +GGE +E +FGC ++GLF Q R FS+CF GG + LGG D +L + + RG++ VEV + +G + A+++ G G IVDSGTTD YLP A F EAW+ ATG + T+ L+L+ E LP + L+ DG V V +SP+ Y+E + + Y RIYL E G VLGAN M +V FD RIGFA + C
Sbjct: 36 PLFQGYGTHFAYLWVGTPAQRVSVIVDTGSGITAFPCNGCNGCGSHT-DPYFNADKSSSSHELQCQTQRQDCVGADGKSSAQSCSN--GKCILSQSYAEGSRWSAHQVTDMVWVGGETKTEVAAAPLAI------PYTFGCQTSETGLFITQLADGIMGMMISESNLASQLQIQGKLSSRSFSLCFVLGGGVMTLGGVDTQLHIEDMRYVKNVQK-GRGWYTVEVLDIFIGDERVAVAKSVYDNGSGKGMIVDSGTTDTYLPRACATKFKEAWQRATGMRF-----TNNALQLSRSEMLALPKIHVHLSGDGGNPPVVVDMSPIDYMEVQ------NDFSYIARIYLDEPQGGVLGANFMRSHDVHFDPEANRIGFAPSDC 395 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.541.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig10.541.1 >prot_Ecto-sp6_S_contig10.541.1 ID=prot_Ecto-sp6_S_contig10.541.1|Name=mRNA_Ecto-sp6_S_contig10.541.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=508bp MTPPQEPDSLDKPCGHQNQGQQHNRHQAETGRHRSTQQHQQQQQQQQHHQback to top mRNA from alignment at Ecto-sp6_S_contig10:1262925..1272172- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig10.541.1 ID=mRNA_Ecto-sp6_S_contig10.541.1|Name=mRNA_Ecto-sp6_S_contig10.541.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=9248bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:1262925..1272172- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig10:1262925..1272172- >mRNA_Ecto-sp6_S_contig10.541.1 ID=mRNA_Ecto-sp6_S_contig10.541.1|Name=mRNA_Ecto-sp6_S_contig10.541.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1524bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:1262925..1272172- (Ectocarpus species6 EcLAC_371)back to top |