mRNA_Ecto-sp6_S_contig10.531.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.531.1 vs. uniprot
Match: A0A6H5KF38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF38_9PHAE) HSP 1 Score: 1020 bits (2638), Expect = 0.000e+0 Identity = 611/708 (86.30%), Postives = 623/708 (87.99%), Query Frame = 1
Query: 1 MSVPRKVVLSVLAITHVLSLVPSLSTPPSSQTTGLLRGRTATSNHSRRGSGSSRVVRCRHRQRQYTVVGEGGAVAARESLSMAVGERKAALGRSSISSRQRRRSARRCHDATAAPTTDGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIFSSTPNGAAAADAGPVNGGTFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVILGEEKHDAVLHAQTGSGKTLAFLLPLLGRVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRDSKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPTHADEDEGEDEEEAARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPPEKKLAVLRALVKRELGVLPSEAAATTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGRAGGGGVTNTALQTDTRGLVFALATKPLEGIAASLDKALGGRGSGXXXXXXXXXXXXXXXXXXXXXVKGR----GEGPPQPPLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPKR 2112
M VPRK++LSVLAITHVLSLVP LSTPPSS+TTGLLRGRTATSNHSRRG+GSSRVVRCRHR RQYTVV EGGA AA +SLSM VGER+AALGRSSISSRQRRRSAR CHDAT XXXXXXXXXXXXXXXXXX +FSSTPNGAAAAD GPVNGGTFRELFRGRLPDWLL RLEQLGFATPTLVQRQALEVILGE KHDAVLHAQTGSGKTLAFLLPLL RVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGR+SKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPTHADEDEGEDEEEA RLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSH+YVVCPPE+KLAVLRALVKRELGV SEAAA XXXX EG+AGGGGV NT +Q DTRGLVFALATKPLEGIAASLDKALGGRGS XXXXXXXXXXXXXXXXXXXXX G PPQPPLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPKR
Sbjct: 1 MPVPRKILLSVLAITHVLSLVPPLSTPPSSRTTGLLRGRTATSNHSRRGTGSSRVVRCRHRPRQYTVVEEGGAEAAGDSLSMVVGERRAALGRSSISSRQRRRSARVCHDATXXXXXXXX--XXXXXXXXXXXXXXXXXXASQDSPAPLLDGGNVFSSTPNGAAAADPGPVNGGTFRELFRGRLPDWLLTRLEQLGFATPTLVQRQALEVILGEGKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPTHADEDEGEDEEEAVRLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHHYVVCPPEQKLAVLRALVKRELGVSASEAAAKLTSGAPPXXXXLGATAVATTAGEGDSPS-------EGQAGGGGVANTDVQADTRGLVFALATKPLEGIAASLDKALGGRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAQPPQPPLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPKR 699
BLAST of mRNA_Ecto-sp6_S_contig10.531.1 vs. uniprot
Match: D8LSP0_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSP0_ECTSI) HSP 1 Score: 803 bits (2074), Expect = 3.760e-277 Identity = 455/530 (85.85%), Postives = 456/530 (86.04%), Query Frame = 1
Query: 523 TFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVILGEEKHDAVLHAQTGSGKTLAFLLPLLGRVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRDSKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPTHADEDEGEDEEEAARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPPEKKLAVLRALVKRELGVLPSEAAATTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGRAGGGGVTNTALQTDTRGLVFALATKPLEGIAASLDKALGGRGSGXXXXXXXXXXXXXXXXXXXXXVKGRGEGPPQPPLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPKR 2112
TFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVILGEEKHDAVLHAQTGSGKTLAFLLPLLGRVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRDSKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPTHADEDEGEDEE AARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPPEKKLAVLR TDTRGLVFALATKPLEGIAASLDKALGGRGSGXXXXXXXXXXXXXXXXXXX KG E PPQPPLAEFLR+ELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPKR
Sbjct: 5 TFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVILGEEKHDAVLHAQTGSGKTLAFLLPLLGRVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRDSKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPTHADEDEGEDEEGAARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPPEKKLAVLR-------------------------------------------------------------------TDTRGLVFALATKPLEGIAASLDKALGGRGSGXXXXXXXXXXXXXXXXXXX--AKGWDEQPPQPPLAEFLRQELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPKR 465
BLAST of mRNA_Ecto-sp6_S_contig10.531.1 vs. uniprot
Match: A0A835Z5K4_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5K4_9STRA) HSP 1 Score: 489 bits (1258), Expect = 7.180e-155 Identity = 300/528 (56.82%), Postives = 359/528 (67.99%), Query Frame = 1
Query: 511 VNGGTFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVILGEEKHDAVLHAQTGSGKTLAFLLPLLGRVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRDSKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPTHADEDEGEDEEEAARLAEVGAG-RVTGAAAPVN---RKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPPEKKLAVLRALVKRELGVLPSEAAATTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGRAGGGGVTNTALQTDTRGLVFALATKPLEGIAASLDKALG-GRGSGXXXXXXXXXXXXXXXXXXXXXVKGRGEGPPQPPLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKI 2079
++G T+REL+ RLP WL+ RLE+LGFA PTLVQ++AL+ IL HDAVLHAQTGSGKTLAFL+PL +DPSRA+VQGLVVVPTRELGLQVA VAKRLAA T + ++ VMSVLEGS+N+RQRAWAWA+PPH+VIGNPE+L+ LV GAVR N V YVVVDEVDACL S RA+L LLAR LSPT A E+E E + ++ G VTGAAA + R++R RQTVFASATVPQHNHF+RQCV +QWTL EPVHVQVH KEAMPP L+H+YV C P KKLA LRALV+RELG G R LVFA A +PL+ +AA+LD L RG G XXXXXXXXXXXXXXXXXXXX PLA+ LRE+LGL RADA++ +R G R+L++TD+AARGLDVPE THVF+ DLP D EGY+HRGGRA V+S+VTP+QEFV++RL N +GV++ ++
Sbjct: 53 LDGDTYRELYGERLPQWLIERLEELGFAKPTLVQQRALDTILAG--HDAVLHAQTGSGKTLAFLVPLFACIDPSRASVQGLVVVPTRELGLQVAAVAKRLAAATGAATGGRVMVMSVLEGSNNRRQRAWAWAEPPHVVIGNPETLSALVAGGAVRCNGVRYVVVDEVDACLRSGDARAALTALLARHLSPTFAQEEEAE-------VPQLPGGVAVTGAAAAADGARRRVRARQTVFASATVPQHNHFMRQCVAQQWTLAEPVHVQVHPKEAMPPGLTHHYVTCAPAKKLAALRALVRRELG---------------------------------------------------GDGXXXXXXAPRALVFAQANRPLDQMAAALDADLRKARGGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPLADVLREDLGLARRADAVARYRAGAARVLLTTDLAARGLDVPETTHVFHFDLPADAEGYIHRGGRAXXXXXXXXVVSIVTPEQEFVLQRLANAVGVEVAQL 520
BLAST of mRNA_Ecto-sp6_S_contig10.531.1 vs. uniprot
Match: A0A7S4MVY5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MVY5_9STRA) HSP 1 Score: 357 bits (916), Expect = 3.400e-105 Identity = 229/571 (40.11%), Postives = 308/571 (53.94%), Query Frame = 1
Query: 550 LPDWLLNRLEQLGFATPTLVQRQALEVILGEEKHDAVLHAQTGSGKTLAFLLPLLGRVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRDSK--IQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEG---------TRASLHELLARSLSPTHADEDEGEDEEEAARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPP-EKKLAVLRALVKRELGVLPSEAAATTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGRAGGGGVTNTALQTDTRGLVFALATKPLEGIAASLDKALGGRGSGXXXXXXXXXXXXXXXXXXXXXVKGRGEGPPQPPLAEFLREELGLNARADAMSLFR--------------------------------------EGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPKR 2112
LP WL R + G+ TPTLVQR++L+ IL D V+ AQTGSGKTL+FLLPLL ++D SR+A+Q ++VVPTRELGLQ++ VA+RLAA + D+K I VM +L+GS NKRQRAWAWA+PPH+V+G P+ LT++V+ G +R NAV +VVVDEVDACLL+ G + LHELL+R LSPT+ + D + + +A L A + G++ V+ DRQTVF+SAT+PQHNHF+RQCVQ QWT+ EP HV E +PP LSH YVVC E K LR ++KRE+ GR + LVF +PLE +AA++ L G ++ G + LR E L+AR+ AM+ FR G R+++STD+AARGLDV +++HV N DLP DG+ YVHRGGRAGRLGR G V+SL+T +QEFV++RL N +G+ ++ + R +R
Sbjct: 104 LPLWLTERCSECGWPTPTLVQRRSLDAIL--TGMDVVIQAQTGSGKTLSFLLPLLSKIDASRSAIQAVIVVPTRELGLQISRVARRLAAASGPDTDAKGKIMVMPILQGSRNKRQRAWAWAEPPHVVVGTPDELTKMVSKGGIRYNAVKFVVVDEVDACLLNNGGSIGMSNLASAGPLHELLSRYLSPTYDEVDVLDGD--SASLVSSSAADLAGSSKTVSHGT-DRQTVFSSATIPQHNHFMRQCVQNQWTVREPTHVCASPGELVPPTLSHSYVVCDGNENKPIGLRRIIKREV--------------------------------------------RRGRL-------------RKALVFCEPQRPLENMAAAIAADLNGT---------------VWTESRNDDIEYAGV------IVSVLRYEESLSARSAAMAAFRGPNSRLKVRDNIMASSKQGQDSGFIEDIDALNQEGVESHGGVRIMLSTDLAARGLDVTDVSHVINYDLPNDGDTYVHRGGRAGRLGRKGTVLSLITGEQEFVLQRLANKLGLAVQCVARQEKEGRKRR 591
BLAST of mRNA_Ecto-sp6_S_contig10.531.1 vs. uniprot
Match: A0A1Z5KA53_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KA53_FISSO) HSP 1 Score: 335 bits (858), Expect = 3.740e-98 Identity = 213/530 (40.19%), Postives = 281/530 (53.02%), Query Frame = 1
Query: 523 TFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVIL-GEEKHDAVLHAQTGSGKTLAFLLPLLGRVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRDSKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAV-RVNAVSYVVVDEVDACLLSEG-----TRASLHELLARSLSPTHADEDEGEDEEEAARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAM-PPCLSHYYVVCPPEKKLAVLRALVKRELGVLPSEAAATTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGRAGGGGVTNTALQTDTRGLVFALATKPLEGIAASLDKALGGRGSGXXXXXXXXXXXXXXXXXXXXXVKGRGEGPPQPPLAEFLREELGLNARADAMSLFREGK---TRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKI 2079
T + ++ +LP WLL R + LG+ PT +Q AL+V+L E K D V+ A+TGSGKTL +LLP L +DP+R+ VQ ++VVPTRELGLQVA VAKRL A + KI +MSVL+GS N+RQRAWAWA+PP +VIG PE L+++V G + R N++ VVVDEVDACLL+ + LHELL++ LS T D+DE ED +GA T R+L RQT+ SAT+PQH HFI+QCVQ +WT TEPV V + E + PP L H Y+VC PE KLA L+ ++ L + + LVFA +PLE +A +L V+ P + LR + L RA AM F R+L STD+AARGLDV +THV + DLP D + YVHR GR GRLGR G+V+S V P+QEFV+ RL N + +D++ +
Sbjct: 59 TLLQRYQYQLPSWLLQRCQDLGYIHPTRIQIAALDVLLLDEHKPDVVIQAETGSGKTLCYLLPTLAAIDPTRSTVQAILVVPTRELGLQVAKVAKRLVAAS----PHKIYIMSVLQGSQNRRQRAWAWAEPPQVVIGTPEELSKMVQLGGIKRYNSIEMVVVDEVDACLLNNAGSLQLAASPLHELLSKQLSATFLDKDEVEDT--------MGALSST----RPKRRLHARQTILCSATIPQHKHFIKQCVQNRWTTTEPVLVALQTGEQLLPPTLEHVYMVCRPETKLAALKRFFRKLL---------------------------------------------------------SSPVPFKVLVFAEEQRPLEEMALAL--------------AWEAEHGVYWQESTAKAVQDNPTDKPIQAITAVLRYQDNLTQRAAAMDAFTRSDDDIVRVLFSTDLAARGLDVANVTHVIHFDLPPDADTYVHRAGRTGRLGRSGQVLSFVAPEQEFVLNRLANKLSLDLRCV 501
BLAST of mRNA_Ecto-sp6_S_contig10.531.1 vs. uniprot
Match: A0A7S3VGM2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VGM2_9STRA) HSP 1 Score: 333 bits (854), Expect = 2.870e-97 Identity = 228/559 (40.79%), Postives = 305/559 (54.56%), Query Frame = 1
Query: 463 IFSSTPNGAAAADAGPVNGGTFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVILGEEKHDAVLHAQTGSGKTLAFLLPLLGRVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGT-SSGRDSKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLS-EGTRAS--------------LHELLARSLSPTHADEDEGEDEE--EAARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPP-EKKLAVLRALVKRELGVLPSEAAATTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGRAGGGGVTNTALQTDTRGLVFALATKPLEGIAASLDKALG-GRGSGXXXXXXXXXXXXXXXXXXXXXVKGRGEGPPQPPLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKI 2079
I + T N DA ++ TF E F +P WL +R ++ G+ PTL+Q +A++ IL + +D ++ AQTGSGKTL +LLPLL R+DP+R+++QG++VVPTRELG+QVA VA+RLAAG+ S +KI VMSVL+GS NKRQRAWA +DPPH+VIG P L +V ++ +AV +VVVDEVDACLL+ +GT S LHELL+R LSPT +E EDEE + L E G R+ DRQTVF SAT+PQHNHF++ CVQ QW + EPV+V E +PP L H YVVC E+K+ L ++ +++ + L T R LVF + LE +A L + L S + RG L + +E+ D S +G R+L+STD+AARGLD+ +ITHV N DLP +G+ YVHRGGRAGRLGR G V+SL+T +QEFV+ RL N +G+DIK I
Sbjct: 39 IHAETVNYKTFGDA-TLSNETFAEHFP-TMPRWLSSRADECGWKNPTLIQHRAIDAILNDG-NDVIIQAQTGSGKTLGYLLPLLSRIDPTRSSIQGIIVVPTRELGVQVARVARRLAAGSVDSETGAKIMVMSVLQGSGNKRQRAWARSDPPHVVIGTPRELGDIVKRKGMKYHAVKFVVVDEVDACLLNNQGTIVSSKSSKSLNVSGSGPLHELLSRYLSPTF---EEAEDEEVIQQLSLVEGGGSRIVSHGT-------DRQTVFVSATIPQHNHFLKSCVQNQWMVREPVYVCASPGELIPPTLKHCYVVCKGMEQKMGGLIRMIHKQIMKR---------------------------------------------------KKSKLDTTCRVLVFCEPKRHLEEMAEILKRDLSKSLDSVYDVSASVLRYEDPTSVRMAAMEEFRGA---DTYLGGRIMDEVSEGDEKDT-SQGVKGDLRILLSTDIAARGLDISDITHVINFDLPHEGDIYVHRGGRAGRLGRKGLVMSLITHEQEFVLERLANKLGLDIKCI 529
BLAST of mRNA_Ecto-sp6_S_contig10.531.1 vs. uniprot
Match: B7FRY7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FRY7_PHATC) HSP 1 Score: 321 bits (822), Expect = 7.540e-92 Identity = 213/571 (37.30%), Postives = 299/571 (52.36%), Query Frame = 1
Query: 505 GPVNGGTFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVILGEEKHDAVLHAQTGSGKTLAFLLPLLGRVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRD-----SKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAV-RVNAVSYVVVDEVDACLLSEG-------TRASLHELLARSLSPTHADEDEGEDEEEAARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVH-AKEAMPPCLSHYYVVC-PPEKKLAVLRALVKRELGVLPSEAAATTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGRAGGGGVTNTALQTDTRGLVFALATKPLEGIAASLDKALGGRGSGXXXXXXXXXXXXXXXXXXXXXVKGRGEGPPQPPLAEFLREELGLNARADAMSLFR-EGKT----------------------RLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRR 2103
G ++ +F + LP WL+ + + G+ P+ +Q +AL+ IL E + DAV+ A+TGSGKTLA+LLP L +D SRAAVQ L+VVPTRELGLQVA VAKRLAA ++ + +I VMSVL+GS N+RQRAWAWA+PPH+VIG P+ L +V G + R N+V ++VVDEVDACLL+ ++LHELL++ LSPT+ D E ++ R + T + P++ + RQT+FASAT+PQH HF++QC Q QWTL EP HV + ++ +P L H Y VC ++KLA LR LV + + ++ + LVF+ A +PLE +A L + G G+ + + LR E L+ RA A+ FR +G T R+L STD+AARGLD+ +I+HV + DLP D + YVHR GR GR GR G+V+ +++P QEFV+ RL N + VD K I ++R
Sbjct: 127 GSLSAESFESRYAAVLPSWLIQKCAECGWTHPSRIQEKALDAILFERR-DAVVQAETGSGKTLAYLLPALASIDGSRAAVQALIVVPTRELGLQVARVAKRLAAASTQNDNVTLNGGRIMVMSVLQGSQNRRQRAWAWAEPPHLVIGTPQELCDMVKLGGIKRYNSVKFIVVDEVDACLLNNAGSLTSNLASSTLHELLSKYLSPTYDDGSANEADDNVLRSVKTSTKTAT-STRPLSSQ---RQTIFASATIPQHRHFLKQCAQNQWTLREPTHVCLRPGEQLLPATLEHSYAVCRSTDQKLATLRRLVTKIYA------------------------------------------------------KSVIEPPKKVLVFSDARRPLEEMAQILANDIEG-------------------GMLWKDGYGKEQERDVRAVVAVLRYEDSLSQRAAAIDSFRGDGYTMASGASQTYTSRDNDSDTAPSLRVLFSTDLAARGLDIADISHVIHFDLPPDADTYVHRAGRTGRFGRSGQVLCIISPDQEFVLTRLTNKLNVDTKCIARQQKKKR 619
BLAST of mRNA_Ecto-sp6_S_contig10.531.1 vs. uniprot
Match: A0A7S1TTQ5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TTQ5_9STRA) HSP 1 Score: 317 bits (812), Expect = 1.890e-91 Identity = 199/537 (37.06%), Postives = 270/537 (50.28%), Query Frame = 1
Query: 523 TFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVILGEEKHDAVLHAQTGSGKTLAFLLPLLGRVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRDSKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPTHADEDEGED---EEEAARLAEVGAG------RVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTE---------PVHVQVHAKEAMPPCLSHYYVVCPPEKKLAVLRALVKRELGVLPSEAAATTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGRAGGGGVTNTALQTDTRGLVFALATKPLEGIAASLDKALGGRGSGXXXXXXXXXXXXXXXXXXXXXVKGRGEGPPQPPLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKI 2079
+FR+L+ LPDWLL RLE+LGF PTL Q AL + E D VLHAQTGSGKTLA+LLPLL ++DPSRAAVQ L+ VP+RELGLQVA V K+L T+ ++ KI VMS LEGS +RQRAWAWA+PPH+VI P L L+ +GA++ + V+YVVVDE D C+L EG + LHELL+RSL+P H E +D E+ L E G GA + ++ + RQTVF SAT+PQ HF+ Q++W P +V++ + +P LSH + V P EKK LRAL+KRE EA GLVFA P +K L G+ EG L + +R++ + RA + +R G+ ++L+S + RGLDVP+ TH+FN+ LP D Y HR G + +++T ++ F + RL N +GV ++I
Sbjct: 57 SFRQLYGTELPDWLLGRLEELGFRNPTLAQEAALGPLFAGE--DVVLHAQTGSGKTLAYLLPLLAQIDPSRAAVQALIAVPSRELGLQVASVLKQLC--TTQTKEDKIMVMSALEGSQLRRQRAWAWAEPPHVVISTPPQLQTLIDSGAIKASGVTYVVVDEADNCMLDEGLESPLHELLSRSLNPNHWTSLEIQDLALREDVRELEEAGVALPGLGLEDAGAGSSGDKSKKRRQTVFCSATIPQSKHFLETTNQRRWLDVRGQDKDAPKLPTYVRLAREAPLPAGLSHAFAVVPREKKAVALRALLKRETSAGRFEA---------------------------------------------------------GLVFAADWSPKPAEEVEAEKLLNPFLDPLGDLAKLLSADLAKSASQEGDGDGKCEGAAPRDLVQIIRKDDNIADRASVVQRYRSGEHKILLSDGVGERGLDVPQTTHIFNMQLPRDTAAYAHRAGXXXXXXXXXNIFTIITEEERFALERLANALGVSFEEI 532
BLAST of mRNA_Ecto-sp6_S_contig10.531.1 vs. uniprot
Match: A0A1E7FWP3_9STRA (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWP3_9STRA) HSP 1 Score: 315 bits (806), Expect = 6.180e-91 Identity = 210/542 (38.75%), Postives = 291/542 (53.69%), Query Frame = 1
Query: 523 TFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVILGEEKHDAVLHAQTGSGKTLAFLLPLLGRVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRDSKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAV-RVNAVSYVVVDEVDACLL-----------SEGTRA---SLHELLARSLSPTHADEDEGEDEEEAARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPP-EKKLAVLRALVKRELGVLPSEAAATTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGRAGGGGVTNTALQTDTRGLVF--ALATKPLEGI----AASLDKALGGRGSGXXXXXXXXXXXXXXXXXXXXXVKGRGEGPPQPPLAEFLREELGLNARADAMSLFRE-GKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKI 2079
+F EL+ LP+WLL + E+ + PTL+Q+++L+ ++ + V+ AQTGSGKTL +LLPLL +++ RA+VQ ++VVPTRELGLQVA VAKRL GR K VMS+LEGSS KRQR WAWA+ P +VIG P L +V G + R+++V+ VVVDEVDACL+ S T+A SL+ELL++ LSPT DED+ D+E + R RK R RQT+F SAT+PQH HF++QC QWTL EPV+V E +PP L H Y+VC EKK+A LR ++K+ NT+ + LVF + +++PL+ I A S+D + K E P+ LR E L+ RA A F E + R++ +TD+AARGLD+ +TH+ + DLP+D + Y+HR GRAGRLG+ G VIS++ P QEFV++RL N + VD+K +
Sbjct: 67 SFSELYSDNLPEWLLEKCEEYNYKCPTLIQQRSLDCFFDDDPNSMVIQAQTGSGKTLTYLLPLLSKLE-DRASVQAMIVVPTRELGLQVAMVAKRLV-----GR--KFMVMSLLEGSSLKRQRKWAWAETPQVVIGTPTELLDMVRYGGLPRISSVNTVVVDEVDACLVHTSSLQGGSNNSVDTKALASSLNELLSKFLSPTFIDEDDIIDDEVITIADDSNKKR--------KRKFRHRQTIFCSATIPQHRHFLKQCKANQWTLEEPVYVCTSPGEHLPPTLDHAYMVCNSNEKKMATLRNIIKK--------------------------------------------------------LNTS---SNKILVFFDSTSSRPLDIIGKKLALSIDNGI-----------------------FYEDKKTNLEDIQSNPVVSILRFEDSLSQRAGATKAFAERSEFRIMATTDLAARGLDILGVTHIIHFDLPIDADTYLHRSGRAGRLGQKGSVISILNPDQEFVLKRLSNALSVDVKCV 510
BLAST of mRNA_Ecto-sp6_S_contig10.531.1 vs. uniprot
Match: W7TME3_9STRA (RNA helicase, DEAD-box type n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TME3_9STRA) HSP 1 Score: 315 bits (808), Expect = 4.730e-90 Identity = 226/584 (38.70%), Postives = 301/584 (51.54%), Query Frame = 1
Query: 523 TFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVILGEEKHDAVLHAQTGSGKTLAFLLPLLGRVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAG---------TSSGRDS----------------------------KIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPT--------HADEDEGEDEEEAARLAEVGA---------GRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPPEK-KLAVLRALVKRELGVLPSEAAATTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGRAGGGGVTNTALQTDTRGLVFALATKPLEGIAASLDKALGGRGSGXXXXXXXXXXXXXXXXXXXXXVKGRGEGPPQPPLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPK 2109
TF +L+ RLP WLL R+E LG+ PT VQ++AL IL E D V+H+QTG+GKTLAF+LPLL +D ++ AVQ LVVVP+RELGLQVA VAK+LA+G GRD+ KI +MS+LEGS N+RQ+AW A+PPH+VIGNP SL +LV G +R + V VVVDEVDACL S T L LL + LSP+ A G ++E L GA GRV AP KL RQT+F SA++PQH HFI+QCVQ+QWTL EP+HV V E MPP L H Y+V P + K A L A ++RE RA G LQ ++F + E +AA L ++ GG +G + RGE + + L + RA M FR G++ LV+TD AARGLDVP ++HV LD+ + + Y+HRGGRAGR+GRPG V+SLV+ + F + RL N + ++++++ + +RP+
Sbjct: 117 TFSQLYGDRLPSWLLARVESLGYTRPTAVQKEALGAIL--EGEDVVVHSQTGTGKTLAFMLPLLAGIDVNKNAVQALVVVPSRELGLQVASVAKQLASGHMYYRGEDGQEEGRDAENEDPERREEGVGSESMTAGASNVRAAKKILIMSLLEGSKNRRQKAWVLAEPPHVVIGNPRSLAQLVERGGIRYHQVKMVVVDEVDACLTSPETGRELQGLLGKYLSPSFLTAELEEEATATGGSSKDEEGPLLPQGAMKDGGGEKGGRVARKLAPW--KLVHRQTLFVSASIPQHKHFIKQCVQQQWTLREPMHVHVTPGELMPPGLRHGYLVAPTKADKPAALLAFLRRE------------------------------------------------RAKG------RLQAC---VIFTADDREAEKMAAILARS-GGLAAGGQ--------------------EPRGESS----VVQALVGGEHIARRAKVMDAFRAGESWGLVTTDFAARGLDVPRVSHVIMLDVAGEADTYLHRGGRAGRMGRPGWVVSLVSETEAFALVRLANSLKIEVRRMGV---MKRPR 611 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.531.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig10.531.1 >prot_Ecto-sp6_S_contig10.531.1 ID=prot_Ecto-sp6_S_contig10.531.1|Name=mRNA_Ecto-sp6_S_contig10.531.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=705bp MSVPRKVVLSVLAITHVLSLVPSLSTPPSSQTTGLLRGRTATSNHSRRGSback to top mRNA from alignment at Ecto-sp6_S_contig10:1174248..1181284+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig10.531.1 ID=mRNA_Ecto-sp6_S_contig10.531.1|Name=mRNA_Ecto-sp6_S_contig10.531.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=7037bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:1174248..1181284+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig10:1174248..1181284+ >mRNA_Ecto-sp6_S_contig10.531.1 ID=mRNA_Ecto-sp6_S_contig10.531.1|Name=mRNA_Ecto-sp6_S_contig10.531.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2115bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:1174248..1181284+ (Ectocarpus species6 EcLAC_371)back to top |