mRNA_Ecto-sp6_S_contig10.525.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.525.1 vs. uniprot
Match: A0A6H5KEW6_9PHAE (Isochorismatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KEW6_9PHAE) HSP 1 Score: 439 bits (1130), Expect = 5.320e-150 Identity = 223/233 (95.71%), Postives = 227/233 (97.42%), Query Frame = 1 Query: 31 IDAEPSPTAITATTTALLVIDMQRDFLEPGGFGESLGNDVSVLRTAIAPCSQLLSACRACPGLLVCHTREGHRPDLSDLPSRHKLMQSPEGKRIGDLGPMGRILVKGERGHDIIPELYPLPMEPCVDKPGKGAFFSTDLETILRSRGIETLIVCGVTTEVCVHSTVREANDRGFACVVVDEACCSFFPEFHRVGLSMIKAQGGILGRVASVASVVRAVRELAVAGAGAADSSS 729 IDAEPSPTAITATTTALLVIDMQRDFLEPGGFGESLGNDVSVLRTAIAPCSQ+LSACRACPGLLVCHTREGHRPDLSDLP RHKLMQSPEGKRIGDLGPMGRILV+GERGHDIIPELYPLPMEPCVDKPGKGAFFSTDLETILRSRGIETLIVCGVTTEVCVH+TVREANDRGFACVVVDEAC SFFPEFHRVGLSM+ AQGGI GRVASVASVVRAVRELA AGAGAAD SS Sbjct: 9 IDAEPSPTAITATTTALLVIDMQRDFLEPGGFGESLGNDVSVLRTAIAPCSQVLSACRACPGLLVCHTREGHRPDLSDLP-RHKLMQSPEGKRIGDLGPMGRILVRGERGHDIIPELYPLPMEPCVDKPGKGAFFSTDLETILRSRGIETLIVCGVTTEVCVHTTVREANDRGFACVVVDEACSSFFPEFHRVGLSMVMAQGGIFGRVASVASVVRAVRELAGAGAGAADPSS 240
BLAST of mRNA_Ecto-sp6_S_contig10.525.1 vs. uniprot
Match: A0A4Q5XBK4_9DELT (Cysteine hydrolase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A4Q5XBK4_9DELT) HSP 1 Score: 288 bits (736), Expect = 7.230e-91 Identity = 142/218 (65.14%), Postives = 171/218 (78.44%), Query Frame = 1 Query: 31 IDAEPSPTAITATTTALLVIDMQRDFLEPGGFGESLGNDVSVLRTAIAPCSQLLSACRACPGLLVCHTREGHRPDLSDLPSRHKLMQSPEGKRIGDLGPMGRILVKGERGHDIIPELYPLPMEPCVDKPGKGAFFSTDLETILRSRGIETLIVCGVTTEVCVHSTVREANDRGFACVVVDEACCSFFPEFHRVGLSMIKAQGGILGRVASVASVVRAV 684 +DAEP P A+ TA+++IDMQRDFLEPGGFGE+LGNDVS+L+ A+ PC LL R G+LV HTREGHRPDLSD P + K+ + RIG GPMGRILV+GE GHD+IPELYPLP EP +DKPGKGAF++TDL +IL+ RGIETLIVCGVTTEVCVH+TVREANDRG+ C+V + C S+FPEFH +GL MIKAQGGI G V+ + RA+ Sbjct: 7 VDAEPEPIALDPQKTAVIMIDMQRDFLEPGGFGETLGNDVSLLKKAVGPCKALLDLARR-TGILVIHTREGHRPDLSDAP-KAKVERGAPSMRIGSPGPMGRILVRGEPGHDLIPELYPLPGEPVIDKPGKGAFYATDLGSILQHRGIETLIVCGVTTEVCVHTTVREANDRGYKCIVPGDCCASYFPEFHEMGLRMIKAQGGIFGWVSDSQKLQRAL 222
BLAST of mRNA_Ecto-sp6_S_contig10.525.1 vs. uniprot
Match: UPI00166D39F9 (cysteine hydrolase n=1 Tax=Chelatococcus reniformis TaxID=1494448 RepID=UPI00166D39F9) HSP 1 Score: 286 bits (732), Expect = 2.770e-90 Identity = 144/218 (66.06%), Postives = 174/218 (79.82%), Query Frame = 1 Query: 31 IDAEPSPTAITATTTALLVIDMQRDFLEPGGFGESLGNDVSVLRTAIAPCSQLLSACRACPGLLVCHTREGHRPDLSDLPSRHKLMQSPEGKRIGDLGPMGRILVKGERGHDIIPELYPLPMEPCVDKPGKGAFFSTDLETILRSRGIETLIVCGVTTEVCVHSTVREANDRGFACVVVDEACCSFFPEFHRVGLSMIKAQGGILGRVASVASVVRAV 684 +DAEP+P ++ TAL++IDMQRDFLEPGGFGE+LGNDVS L AIAPC ++L A RA GLLV HTREGHRPDLSD P K+ + RIGD GPMGRIL++GE GHDII L P P EP +DKPGKGAF+ TDLE +LR+RGI+TL+VCGVTTEVCV++TVREANDRG+ CVV+ + C S+FPEFH GL+MIKAQGGI G V+S +V+RA+ Sbjct: 5 VDAEPAPISLDPARTALIIIDMQRDFLEPGGFGETLGNDVSRLTPAIAPCRRVLDASRA-HGLLVIHTREGHRPDLSDAPLA-KVQRGLPSLRIGDPGPMGRILIRGEAGHDIIAALTPAPGEPVIDKPGKGAFYQTDLELMLRNRGIDTLLVCGVTTEVCVNTTVREANDRGYRCVVLGDCCGSYFPEFHEAGLAMIKAQGGIFGWVSSSQAVLRAI 220
BLAST of mRNA_Ecto-sp6_S_contig10.525.1 vs. uniprot
Match: UPI001BCC76C6 (cysteine hydrolase n=1 Tax=Roseococcus sp. SDR TaxID=2835532 RepID=UPI001BCC76C6) HSP 1 Score: 285 bits (730), Expect = 6.120e-90 Identity = 148/220 (67.27%), Postives = 170/220 (77.27%), Query Frame = 1 Query: 31 IDAEPSPTAITATTTALLVIDMQRDFLEPGGFGESLGNDVSVLRTAIAPCSQLLSACRACPGLLVCHTREGHRPDLSDLPSRHKLMQSPEGKRIGDLGPMGRILVKGERGHDIIPELYPLPMEPCVDKPGKGAFFSTDLETILRSRGIETLIVCGVTTEVCVHSTVREANDRGFACVVVDEACCSFFPEFHRVGLSMIKAQGGILGRVASVASVVRAVRE 690 I+A P P TA ++IDMQRDFLEPGGFG +LGNDVS L +AIAPC+ LL+A RA GLLV HTREGHRPDL+D P KL +SP G RIGD GPMGRILV+GE GHDIIPEL PLP E +DKPGKGAF++TDLE ILR+RGIE L+V GVTTEVCV +TVREANDRGF C V+ +AC S+FP FH L+MI AQGGI G VAS A+ A+RE Sbjct: 5 IEALPGPFTFEPARTATIIIDMQRDFLEPGGFGAALGNDVSQLHSAIAPCAALLAASRAA-GLLVIHTREGHRPDLTDCPPA-KLTRSPPGMRIGDPGPMGRILVRGEAGHDIIPELAPLPGEVVLDKPGKGAFWATDLENILRNRGIEALLVAGVTTEVCVSTTVREANDRGFRCAVISDACASYFPAFHTAALAMIHAQGGIFGWVASSAAATTALRE 222
BLAST of mRNA_Ecto-sp6_S_contig10.525.1 vs. uniprot
Match: UPI0005C20E2C (cysteine hydrolase n=1 Tax=Roseomonas aerilata TaxID=452982 RepID=UPI0005C20E2C) HSP 1 Score: 285 bits (729), Expect = 7.530e-90 Identity = 143/218 (65.60%), Postives = 172/218 (78.90%), Query Frame = 1 Query: 31 IDAEPSPTAITATTTALLVIDMQRDFLEPGGFGESLGNDVSVLRTAIAPCSQLLSACRACPGLLVCHTREGHRPDLSDLPSRHKLMQSPEGKRIGDLGPMGRILVKGERGHDIIPELYPLPMEPCVDKPGKGAFFSTDLETILRSRGIETLIVCGVTTEVCVHSTVREANDRGFACVVVDEACCSFFPEFHRVGLSMIKAQGGILGRVASVASVVRAV 684 I+AEP+P +I TALL+IDMQRDFLEPGGFGESLGNDVS L AI PC +L A RA GLLV HTREGHRPDLSD P K+ + RIG GPMGRILV+GE GHDI+PEL P EP +DKPGKGAF++TDL+T+LR+RG+ETL+V GVTTEVC+H+TVREANDRG+ CVV+ + C S+FPEFH GL+MIKAQGGI G V++ A+ + A+ Sbjct: 5 IEAEPAPLSIDPARTALLIIDMQRDFLEPGGFGESLGNDVSRLAAAIGPCRTVLDAARAA-GLLVLHTREGHRPDLSDAPPA-KIARGDPSVRIGAPGPMGRILVRGEPGHDIVPELAPASGEPVIDKPGKGAFYATDLDTMLRNRGVETLLVAGVTTEVCIHTTVREANDRGYRCVVLADCCASYFPEFHAAGLAMIKAQGGIFGWVSTSAAAISAL 220
BLAST of mRNA_Ecto-sp6_S_contig10.525.1 vs. uniprot
Match: UPI00193418CA (cysteine hydrolase n=1 Tax=Roseomonas ponticola TaxID=2786951 RepID=UPI00193418CA) HSP 1 Score: 285 bits (729), Expect = 9.890e-90 Identity = 144/218 (66.06%), Postives = 171/218 (78.44%), Query Frame = 1 Query: 31 IDAEPSPTAITATTTALLVIDMQRDFLEPGGFGESLGNDVSVLRTAIAPCSQLLSACRACPGLLVCHTREGHRPDLSDLPSRHKLMQSPEGKRIGDLGPMGRILVKGERGHDIIPELYPLPMEPCVDKPGKGAFFSTDLETILRSRGIETLIVCGVTTEVCVHSTVREANDRGFACVVVDEACCSFFPEFHRVGLSMIKAQGGILGRVASVASVVRAV 684 I A+P+P A T +AL+VIDMQRDFLEPGGFGESLGNDVS+L +AI PC +L+A RA G+LV HTREGHRPDLSD P K+ + P+G+RIGD GPMGRIL++GE GHDII L PLP EP +DKPGKGAF++T+LE +LR RGIE L V GVTTEVCVH+TVREANDRGF C+V+ +AC S+FPEFH L MI AQGGI G V+ A V A+ Sbjct: 5 IPADPAPFAFTPARSALVVIDMQRDFLEPGGFGESLGNDVSLLASAIGPCQAVLAAARAA-GMLVIHTREGHRPDLSDAPPA-KVERGPKGQRIGDPGPMGRILIRGEPGHDIIEALAPLPGEPVIDKPGKGAFYATELEPMLRHRGIEVLFVAGVTTEVCVHTTVREANDRGFRCLVIADACASYFPEFHATALRMISAQGGIFGWVSEAARVTAAL 220
BLAST of mRNA_Ecto-sp6_S_contig10.525.1 vs. uniprot
Match: A0A2W7HX85_9PROT (Nicotinamidase-related amidase n=1 Tax=Humitalea rosea TaxID=990373 RepID=A0A2W7HX85_9PROT) HSP 1 Score: 284 bits (727), Expect = 1.840e-89 Identity = 140/221 (63.35%), Postives = 174/221 (78.73%), Query Frame = 1 Query: 31 IDAEPSPTAITATTTALLVIDMQRDFLEPGGFGESLGNDVSVLRTAIAPCSQLLSACRACPGLLVCHTREGHRPDLSDLPSRHKLMQSPEGKRIGDLGPMGRILVKGERGHDIIPELYPLPMEPCVDKPGKGAFFSTDLETILRSRGIETLIVCGVTTEVCVHSTVREANDRGFACVVVDEACCSFFPEFHRVGLSMIKAQGGILGRVASVASVVRAVREL 693 +DA+P+P A+ TALLVIDMQRDFLEPGGFG +LGNDVS+L A+ PC LL+A RA GL + HTREGHRPDLSD P K+ + P G RIGD GPMGRIL++GE GH+IIP L P P EP +DKPGKGAF+ TDL+ +LR+RG++TL+V GVTTEVCVH++VREANDRG C+VV + C S+FP+FH L+MI AQGGI G VA+VA+V +A+ E+ Sbjct: 4 VDAQPAPIALDPRHTALLVIDMQRDFLEPGGFGAALGNDVSLLGAAVEPCRMLLAAARAA-GLTIIHTREGHRPDLSDAPPA-KVERGPPGLRIGDPGPMGRILIRGEPGHEIIPALAPEPGEPVIDKPGKGAFYQTDLDLVLRNRGVDTLLVAGVTTEVCVHTSVREANDRGLRCIVVGDCCASYFPDFHATALAMIAAQGGIFGWVATVAAVAQALDEV 222
BLAST of mRNA_Ecto-sp6_S_contig10.525.1 vs. uniprot
Match: A0A521LCZ0_9HYPH (Cysteine hydrolase n=2 Tax=unclassified Bosea TaxID=2653178 RepID=A0A521LCZ0_9HYPH) HSP 1 Score: 285 bits (728), Expect = 2.100e-89 Identity = 145/218 (66.51%), Postives = 172/218 (78.90%), Query Frame = 1 Query: 31 IDAEPSPTAITATTTALLVIDMQRDFLEPGGFGESLGNDVSVLRTAIAPCSQLLSACRACPGLLVCHTREGHRPDLSDLPSRHKLMQSPEGKRIGDLGPMGRILVKGERGHDIIPELYPLPMEPCVDKPGKGAFFSTDLETILRSRGIETLIVCGVTTEVCVHSTVREANDRGFACVVVDEACCSFFPEFHRVGLSMIKAQGGILGRVASVASVVRAV 684 I A+PSP A+ ALLVIDMQRDFLEPGGFG +LGNDVS+LR+AI PC LL + RA GLLV HTREGHRPDL+D P +K+ + P KRIG GPMGRILV+GE GH+IIPEL PL EP +DKPGKGAF+ TDL+ +LR+RGIE LIV GVTTEVCVH+TVREANDRG+ C+V +AC S+FPEFH VGL MI AQGGI G V++ + V+ A+ Sbjct: 11 IPADPSPFALDVARAALLVIDMQRDFLEPGGFGAALGNDVSLLRSAIGPCRALLESARAA-GLLVIHTREGHRPDLADAPP-NKVQRGPPEKRIGACGPMGRILVRGEPGHEIIPELSPLAGEPVIDKPGKGAFYQTDLDLMLRNRGIEALIVAGVTTEVCVHTTVREANDRGYRCLVPGDACASYFPEFHAVGLRMIAAQGGIFGWVSTTSQVLAAL 226
BLAST of mRNA_Ecto-sp6_S_contig10.525.1 vs. uniprot
Match: A0A2W5NA56_RHOSU (Isochorismatase n=1 Tax=Rhodovulum sulfidophilum TaxID=35806 RepID=A0A2W5NA56_RHOSU) HSP 1 Score: 284 bits (726), Expect = 2.600e-89 Identity = 138/208 (66.35%), Postives = 165/208 (79.33%), Query Frame = 1 Query: 31 IDAEPSPTAITATTTALLVIDMQRDFLEPGGFGESLGNDVSVLRTAIAPCSQLLSACRACPGLLVCHTREGHRPDLSDLPSRHKLMQSPEGKRIGDLGPMGRILVKGERGHDIIPELYPLPMEPCVDKPGKGAFFSTDLETILRSRGIETLIVCGVTTEVCVHSTVREANDRGFACVVVDEACCSFFPEFHRVGLSMIKAQGGILGRV 654 + AEP+P A TAL+VIDMQRDFLEPGGFGE+LGNDVS+L+ A+ PC++ L A R G+LV HTREGHRPDLSD P K+ + KRIGD GPMGRIL++GE GHDI+ +LYP+ E +DKPGKGAF TDLE ILR+RGI+TL+VCGVTTEVCVH+T+RE NDRG+ CV + +AC S+FPEFHRVGL MIKAQGGI G V Sbjct: 5 LPAEPAPLAFDPAATALVVIDMQRDFLEPGGFGETLGNDVSLLQAAVGPCARALDAARR-TGMLVIHTREGHRPDLSDAPPA-KIARGVPSKRIGDPGPMGRILIRGEAGHDIVSDLYPIEGETVIDKPGKGAFHQTDLEQILRNRGIDTLLVCGVTTEVCVHTTIREGNDRGYRCVAIADACASYFPEFHRVGLEMIKAQGGIFGWV 210
BLAST of mRNA_Ecto-sp6_S_contig10.525.1 vs. uniprot
Match: A0A501WZ78_9RHOB (Cysteine hydrolase n=1 Tax=Amaricoccus solimangrovi TaxID=2589815 RepID=A0A501WZ78_9RHOB) HSP 1 Score: 284 bits (726), Expect = 2.600e-89 Identity = 140/218 (64.22%), Postives = 170/218 (77.98%), Query Frame = 1 Query: 31 IDAEPSPTAITATTTALLVIDMQRDFLEPGGFGESLGNDVSVLRTAIAPCSQLLSACRACPGLLVCHTREGHRPDLSDLPSRHKLMQSPEGKRIGDLGPMGRILVKGERGHDIIPELYPLPMEPCVDKPGKGAFFSTDLETILRSRGIETLIVCGVTTEVCVHSTVREANDRGFACVVVDEACCSFFPEFHRVGLSMIKAQGGILGRVASVASVVRAV 684 +DAEP P + TAL+VIDMQRDFLEPGGFGE+LGNDVS+L+ A+ PC+ L+A RA G+LV HTREGHRPDLSD P K+ + +RIGD GPMGRILV+GE GHDI+ LYP E +DKPGKGAF TDLE ILR+ G++TL+VCGVTTEVCVH+T+RE NDRG+ CV + +AC S+FPEFHRVGL MIKAQGGI G V+ A++ RA+ Sbjct: 5 LDAEPGPLSFEIGKTALVVIDMQRDFLEPGGFGETLGNDVSLLQAAVGPCAAALAAARAA-GMLVIHTREGHRPDLSDAPPA-KIARGEPSRRIGDPGPMGRILVRGEPGHDIVSALYPAEGEVVLDKPGKGAFHQTDLEQILRNNGVDTLLVCGVTTEVCVHTTIREGNDRGYRCVAIGDACASYFPEFHRVGLEMIKAQGGIFGWVSDSAALTRAL 220 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.525.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig10.525.1 >prot_Ecto-sp6_S_contig10.525.1 ID=prot_Ecto-sp6_S_contig10.525.1|Name=mRNA_Ecto-sp6_S_contig10.525.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=213bp MQRDFLEPGGFGESLGNDVSVLRTAIAPCSQLLSACRACPGLLVCHTREGback to top mRNA from alignment at Ecto-sp6_S_contig10:1134789..1141746+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig10.525.1 ID=mRNA_Ecto-sp6_S_contig10.525.1|Name=mRNA_Ecto-sp6_S_contig10.525.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=6958bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:1134789..1141746+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig10:1134789..1141746+ >mRNA_Ecto-sp6_S_contig10.525.1 ID=mRNA_Ecto-sp6_S_contig10.525.1|Name=mRNA_Ecto-sp6_S_contig10.525.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=639bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:1134789..1141746+ (Ectocarpus species6 EcLAC_371)back to top |