mRNA_Ecto-sp6_S_contig10.482.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig10.482.1
Unique NamemRNA_Ecto-sp6_S_contig10.482.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.482.1 vs. uniprot
Match: A0A6H5JPN3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPN3_9PHAE)

HSP 1 Score: 497 bits (1280), Expect = 8.580e-169
Identity = 425/507 (83.83%), Postives = 433/507 (85.40%), Query Frame = 1
Query:    1 MSKKRERDGGGSDTFQHDN-GAESLLFEIAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDGNNNVASTAEPSKYHPAAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNTTPANPVLYVEFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFSTACWVGKKEDNPSEEPLPLPESLQSLRGEDEQASGXXXXXXXXXXXXDAAPKLTAADFKTHFGGGNPASLMSGDSKSKASAGNDAGNGERGXXXXXXXXXXXXXXXXXXXXXXTVGRRTSSRSTKSTKTYVEEDSDNGELEDGSGTXXXXXXXXXXXXXXXXXX--GDEDVVAVEGGSSGSSKNGGXXSXXXXXXXXXXXXXGVEAFSILNAPGTAKRKPVTVGSGKEEKNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGGSGEENXXXXXXXXXXXXXVAAAAVAMRSGPARRSSRSSAVSRVKYTQ 1512
            MS+KRERDGG  DTFQ D+ GAESLLFEIAP      XXXXXXXXXXXXXXXXXXXXXX         STAEPSKYHPAAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPG LGLGNGSTGGKLGTLNN  PANPVLYVEFPEGRLKCTGR VHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFS ACWVGKKEDNPSEEPLPLPESLQ+LRGEDEQA G            DAA KLTAADFKTHFGGGNPASLMSGDS+SKASA          XXXXXXXXXXXXXXXXXX    TVGRRTSSRSTKSTKTYVEEDS +GELEDG G+ XXXXXXXXXXXXXXXXX  GDEDVVAVEGGSSGSSK+GGXXSXXXXXXXXX    GVEAFSILN+P TAKRKPVTVGSGKE    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   KGGSGE  XXXXXXXXXXXXXVAAAAV  RSGPARRSSRSSA SRVKYTQ
Sbjct:    1 MSRKRERDGGDGDTFQQDSSGAESLLFEIAPPPEDRTXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXSTAEPSKYHPAAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGVLGLGNGSTGGKLGTLNNAAPANPVLYVEFPEGRLKCTGRMVHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFSKACWVGKKEDNPSEEPLPLPESLQTLRGEDEQAPGSGGDDGDATGGGDAAQKLTAADFKTHFGGGNPASLMSGDSESKASA--XXXXXXXXXXXXXXXXXXXXXXXXXXGATKTVGRRTSSRSTKSTKTYVEEDSSDGELEDGGGSSXXXXXXXXXXXXXXXXXXDGDEDVVAVEGGSSGSSKDGGXXSXXXXXXXXX----GVEAFSILNSPATAKRKPVTVGSGKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDD-KGGSGEXXXXXXXXXXXXXXXVAAAAV--RSGPARRSSRSSAASRVKYTQ 497          
BLAST of mRNA_Ecto-sp6_S_contig10.482.1 vs. uniprot
Match: D8LST7_ECTSI (Putative type II topoisomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LST7_ECTSI)

HSP 1 Score: 493 bits (1269), Expect = 3.120e-167
Identity = 326/359 (90.81%), Postives = 329/359 (91.64%), Query Frame = 1
Query:  175 AGDGNNNVASTAEPSKYHPAAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNTTPANPVLYVEFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFSTACWVGKKEDNPSEEPLPLPESLQSLRGEDEQASGXXXXXXXXXXXXDAAPKLTAADFKTHFGGGNPASLMSGDSKSKASAGNDAGNGERGXXXXXXXXXXXXXXXXXXXXXXTVGRRTSSRSTKSTKTYVEEDSDNGELEDGSGTXXXXXXXXXXXXXXXXXXGDEDVVAVEGGSSGSSKNGGXXSXXXXXXXXXXXXXGVEAFSILNAPGTAKRKPVTVGSGKEEKNA 1251
            AGDGNNN ASTAEPSKYHPAAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNN TPANPVLY+EFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFS ACWVGKKEDNPSEEPLPLPESLQSLRGEDEQASG  XXXXXXXXX DAAPKLTAADFKTHFGGGNPASLMSGDS+SKASAGNDAGNG   XXXXXXXXXXXXXXXXXXXX  TVGRRTS        TYVEEDSD+GELEDG   XXXXXXXXXXXXXXX   GDEDVVAVEGGSSGSSKNGGXX XXXXXXXXXXX  GVEAFSILNAP  AKRKPVTVGSGKEEKNA
Sbjct:   48 AGDGNNNAASTAEPSKYHPAAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNATPANPVLYMEFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFSKACWVGKKEDNPSEEPLPLPESLQSLRGEDEQASGGGXXXXXXXXXGDAAPKLTAADFKTHFGGGNPASLMSGDSESKASAGNDAGNGXXXXXXXXXXXXXXXXXXXXXXXTKTVGRRTSXXXXXXXXTYVEEDSDDGELEDGXXXXXXXXXXXXXXXXXXADDGDEDVVAVEGGSSGSSKNGGXXXXXXXXXXXXXX--GVEAFSILNAPAAAKRKPVTVGSGKEEKNA 404          
BLAST of mRNA_Ecto-sp6_S_contig10.482.1 vs. uniprot
Match: A0A453TDM3_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453TDM3_AEGTS)

HSP 1 Score: 100 bits (250), Expect = 8.630e-21
Identity = 52/136 (38.24%), Postives = 80/136 (58.82%), Query Frame = 1
Query:  232 AAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNTTPANPVLYVEFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFSTACWVGKKEDNPSEEPLPLPESLQSL 639
            AA+ PS  + +  G ++V+ + + RGR L   PG L     + GG++G L +    NPVLY+EFP+GR+K  G  V+ K ++ TL   ++A       C DVF+S + FS + WVG KE+NP E  L  P+ +Q++
Sbjct:   45 AALPPSGAVARLQGRDIVRPRGQRRGRFLFSFPGLLAPA--AAGGRVGELADLGTKNPVLYLEFPQGRMKLLGTHVYPKNKYLTLQMTRSAKGVA---CEDVFESMIVFSESWWVGTKEENPDELKLEFPKEMQNV 175          
BLAST of mRNA_Ecto-sp6_S_contig10.482.1 vs. uniprot
Match: A0A453TD59_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453TD59_AEGTS)

HSP 1 Score: 100 bits (250), Expect = 1.840e-20
Identity = 53/135 (39.26%), Postives = 79/135 (58.52%), Query Frame = 1
Query:  232 AAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNTTPANPVLYVEFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFSTACWVGKKEDNPSEEPLPLPESLQS 636
            AA+ PS  + +  G ++V+ + + RGR L   PG L     + GG++G L +    NPVLY+EFP+GR+K  G  V+ K ++ TL   ++A       C DVF+S V FS + WVG KE+NP E  L  P+ +Q+
Sbjct:   45 AALPPSGAVARLQGRDIVRPRGQRRGRFLFSFPGLLAPA--AAGGRVGELADLGTKNPVLYLEFPQGRMKLLGTHVYPKNKYLTLQMTRSAKGVA---CEDVFESMVLFSESWWVGTKEENPDELKLEFPKEMQN 174          
BLAST of mRNA_Ecto-sp6_S_contig10.482.1 vs. uniprot
Match: A0A446Z088_TRITD (Uncharacterized protein n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446Z088_TRITD)

HSP 1 Score: 101 bits (252), Expect = 3.360e-20
Identity = 54/135 (40.00%), Postives = 80/135 (59.26%), Query Frame = 1
Query:  232 AAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNTTPANPVLYVEFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFSTACWVGKKEDNPSEEPLPLPESLQS 636
            AA+ PS  + +  G ++V+ + + RGR L   PG L    G+ GG++G L +    NPVLY+EFP+GR+K  G  V+ K ++ TL   ++A       C DVF+S + FS A WVG KE+NP E  L  P+ +Q+
Sbjct:   43 AALPPSGAVVRLQGRDIVRPRGQRRGRFLFSFPGLLAPAAGA-GGRVGELADLGTKNPVLYLEFPQGRMKLLGTHVYPKNKYLTLQMTRSAKGVA---CEDVFESMIVFSEAWWVGTKEENPDELKLEFPKEMQN 173          
BLAST of mRNA_Ecto-sp6_S_contig10.482.1 vs. uniprot
Match: A0A811S6P0_9POAL (Hypothetical protein n=2 Tax=Miscanthus lutarioriparius TaxID=422564 RepID=A0A811S6P0_9POAL)

HSP 1 Score: 103 bits (257), Expect = 4.190e-20
Identity = 54/135 (40.00%), Postives = 78/135 (57.78%), Query Frame = 1
Query:  232 AAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNTTPANPVLYVEFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFSTACWVGKKEDNPSEEPLPLPESLQS 636
            A +APS  + +  G +VV+   + + R L   PG L     ++GG++G L +    NPVLY+EFP+GR+K  G  V+ K ++ TL   ++A       C DVF+S + FS ACWVG KEDNP E  L  P+  Q+
Sbjct:   41 APLAPSGAVTRLQGRDVVRRGGQRKSRYLFSFPGLLAPA--ASGGRIGELADLGTKNPVLYLEFPQGRMKLFGTHVYPKNKYLTLQMTRSAKGVV---CEDVFESLIVFSEACWVGTKEDNPEELKLEFPKEFQN 170          
BLAST of mRNA_Ecto-sp6_S_contig10.482.1 vs. uniprot
Match: A0A176W2G0_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176W2G0_MARPO)

HSP 1 Score: 102 bits (253), Expect = 7.350e-20
Identity = 53/141 (37.59%), Postives = 78/141 (55.32%), Query Frame = 1
Query:  229 PAAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNTTPANPVLYVEFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFSTACWVGKKEDNPSEEPLPLPESLQSLRGED 651
            PA + P+ T+R+C+G ++VK K   + + L   PG +      +GGK G L +    NP+LYV+FP GRLK  G  V+ K ++ T++     G      C D F+S V F  + W+G KE+NP E  LP P  LQ ++  D
Sbjct:   43 PAPLVPTKTIRKCNGKDIVK-KGNRKTKYLFAFPGLVAP---VSGGKFGDLTHLDSRNPILYVDFPHGRLKLFGTIVYPKNKYLTMHFVPGRGDIV---CEDYFESLVVFPESWWIGTKEENPEELRLPFPSDLQQVKHAD 176          
BLAST of mRNA_Ecto-sp6_S_contig10.482.1 vs. uniprot
Match: A0A453TD71_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453TD71_AEGTS)

HSP 1 Score: 100 bits (248), Expect = 2.440e-19
Identity = 52/135 (38.52%), Postives = 79/135 (58.52%), Query Frame = 1
Query:  232 AAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNTTPANPVLYVEFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFSTACWVGKKEDNPSEEPLPLPESLQS 636
            AA+ PS  + +  G ++V+ + + RGR L   PG L     + GG++G L +    NPVLY+EFP+GR+K  G  V+ K ++ TL   ++A       C DVF+S + FS + WVG KE+NP E  L  P+ +Q+
Sbjct:   45 AALPPSGAVARLQGRDIVRPRGQRRGRFLFSFPGLLAPA--AAGGRVGELADLGTKNPVLYLEFPQGRMKLLGTHVYPKNKYLTLQMTRSAKGVA---CEDVFESMIVFSESWWVGTKEENPDELKLEFPKEMQN 174          
BLAST of mRNA_Ecto-sp6_S_contig10.482.1 vs. uniprot
Match: W4FT72_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FT72_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 3.250e-19
Identity = 54/134 (40.30%), Postives = 73/134 (54.48%), Query Frame = 1
Query:  235 AIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNTTPANPVLYVEFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFSTACWVGKKEDNPSEEPLPLPESLQS 636
            AI  +  LR C G ++ K     +G+ L   PG +       GG LGTL+      PVLY++FP+GRLK  G  V+A+ RF TL   + A R   + C DVFD+ V F    W+G  + NPSE PLP+P  L +
Sbjct:   26 AIPLARALRACHGQDIKKKSGHRKGKFLFAFPGLVSPM--PEGGTLGTLDKLDTDKPVLYIDFPQGRLKMQGTLVYAQNRFLTL---QCARRGKSVVCDDVFDAVVTFPEVSWIGPVDANPSEAPLPIPSFLHA 154          
BLAST of mRNA_Ecto-sp6_S_contig10.482.1 vs. uniprot
Match: A0A1D6LLW1_MAIZE (DNA-binding protein RHL1 n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6LLW1_MAIZE)

HSP 1 Score: 97.8 bits (242), Expect = 3.300e-19
Identity = 51/136 (37.50%), Postives = 79/136 (58.09%), Query Frame = 1
Query:  232 AAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNTTPANPVLYVEFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFSTACWVGKKEDNPSEEPLPLPESLQSL 639
            A +AP++ + +  G +VV+   + + R L   PG L     ++GG++G L +    NP+LY+EFP+GR+K  G  V+ K ++ TL   ++A       C DVF+S + FS A WVG KEDNP E  L  P+  Q++
Sbjct:   41 APLAPAAAVTRLQGRDVVRRGGQRKSRYLFSFPGLLAPA--ASGGRVGELADLGTKNPLLYLEFPQGRMKLFGTHVYPKNKYLTLQMTRSAKGVV---CEDVFESLIVFSEAWWVGTKEDNPEELKLEFPKEFQNV 171          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.482.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JPN3_9PHAE8.580e-16983.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LST7_ECTSI3.120e-16790.81Putative type II topoisomerase n=1 Tax=Ectocarpus ... [more]
A0A453TDM3_AEGTS8.630e-2138.24Uncharacterized protein n=1 Tax=Aegilops tauschii ... [more]
A0A453TD59_AEGTS1.840e-2039.26Uncharacterized protein n=1 Tax=Aegilops tauschii ... [more]
A0A446Z088_TRITD3.360e-2040.00Uncharacterized protein n=1 Tax=Triticum turgidum ... [more]
A0A811S6P0_9POAL4.190e-2040.00Hypothetical protein n=2 Tax=Miscanthus lutariorip... [more]
A0A176W2G0_MARPO7.350e-2037.59Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
A0A453TD71_AEGTS2.440e-1938.52Uncharacterized protein n=1 Tax=Aegilops tauschii ... [more]
W4FT72_9STRA3.250e-1940.30Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A1D6LLW1_MAIZE3.300e-1937.50DNA-binding protein RHL1 n=1 Tax=Zea mays TaxID=45... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:668070..671138 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score100.5
Seed ortholog evalue2.5e-18
Seed eggNOG ortholog192875.XP_004349392.1
Model size1617
Hectar predicted targeting categoryother localisation
GOsGO:0000902,GO:0000904,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0007049,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009653,GO:0009888,GO:0009987,GO:0010015,GO:0010053,GO:0010054,GO:0016043,GO:0021700,GO:0022402,GO:0022622,GO:0030154,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032989,GO:0034641,GO:0034645,GO:0042023,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0044786,GO:0046483,GO:0048364,GO:0048468,GO:0048469,GO:0048731,GO:0048764,GO:0048765,GO:0048766,GO:0048856,GO:0048869,GO:0070013,GO:0071695,GO:0071704,GO:0071840,GO:0090304,GO:0090558,GO:0090627,GO:0097159,GO:0099402,GO:1901360,GO:1901363,GO:1901576,GO:1905392
Exons3
EggNOG OGs28NXV@1,2QVIA@2759
Cds size1617
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348701.8265421-CDS-Ecto-sp6_S_contig10:668069..6690531682348701.8265421-CDS-Ecto-sp6_S_contig10:668069..669053Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 668070..669053 -
1682348701.835119-CDS-Ecto-sp6_S_contig10:669607..6698111682348701.835119-CDS-Ecto-sp6_S_contig10:669607..669811Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 669608..669811 -
1682348701.8423142-CDS-Ecto-sp6_S_contig10:670709..6711381682348701.8423142-CDS-Ecto-sp6_S_contig10:670709..671138Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 670710..671138 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.482.1prot_Ecto-sp6_S_contig10.482.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig10 668070..671138 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig10.482.1

>prot_Ecto-sp6_S_contig10.482.1 ID=prot_Ecto-sp6_S_contig10.482.1|Name=mRNA_Ecto-sp6_S_contig10.482.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=539bp
MSKKRERDGGGSDTFQHDNGAESLLFEIAPPPEDRTTKRSKKSSAADAPL
PPQESAGSAGDGNNNVASTAEPSKYHPAAIAPSSTLRQCDGLNVVKNKAR
GRGRQLMVLPGALGLGNGSTGGKLGTLNNTTPANPVLYVEFPEGRLKCTG
RTVHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFSTACWVGKKEDNPS
EEPLPLPESLQSLRGEDEQASGGGGDDGDATGGGDAAPKLTAADFKTHFG
GGNPASLMSGDSKSKASAGNDAGNGERGGGGSGGEEREGRSAAAAGAATK
TVGRRTSSRSTKSTKTYVEEDSDNGELEDGSGTSSSSGDEGAGGERGGAD
DGDEDVVAVEGGSSGSSKNGGGGSGSGSGSGSGSGAGGVEAFSILNAPGT
AKRKPVTVGSGKEEKNAPASSKKRKAGAGSAKGKGRRRALASSGSSSSSD
DDDDKGGSGEENGGTGEESPASGEDVAAAAVAMRSGPARRSSRSSAVSRV
KYTQSSSGSEEEDEEKEEEEEEGGDGGDDDDDDDEFEP*
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mRNA from alignment at Ecto-sp6_S_contig10:668070..671138-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig10.482.1 ID=mRNA_Ecto-sp6_S_contig10.482.1|Name=mRNA_Ecto-sp6_S_contig10.482.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3069bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:668070..671138- (Ectocarpus species6 EcLAC_371)
ATGAGCAAAAAGCGAGAGAGGGACGGCGGCGGCAGTGACACGTTCCAGCA CGACAACGGCGCAGAATCGCTCCTGTTTGAAATCGCTCCGCCTCCCGAAG ACAGGACGACCAAGCGCAGCAAGAAGAGCAGTGCTGCTGACGCCCCTCTG CCGCCGCAAGAGTCTGCGGGCAGTGCCGGCGACGGCAACAATAATGTGGC AAGCACAGCAGAGCCGAGCAAGTATCACCCGGCAGCCATCGCACCGTCTT CCACCCTTCGGCAATGCGACGGCTTGAATGTCGTGAAGAACAAGGCGCGG GGACGAGGGCGGCAGCTCATGGTACTGCCCGGCGCGCTCGGCCTCGGCAA CGGCAGTACCGGCGGCAAACTTGGGACGCTGAACAATACCACACCAGCGA ACCCCGTGCTGTACGTGGAGTTTCCCGAGGTGCGCGAGCAGTTTCGTTTT TGGTACGACAGAGGCTCGGCTCTGACCTTGAGTGTTTGAATTTAAAAAAG TAAAAAAAAGTCGCAACTTCCTCTCTTTTCTGACGAATTTGTGTTCACGT ACAGGCCATGTTTCCCTTCATCAACCTGTATGCATAGGCATTTGCATGCT ACTTTAGCTGTTGTGTTTCATGCAGAGCATCGACGCATATATCTTTGAAG CCTCCGCGTTTTTCTGAACGGAATGGATTTCCGAAATTCCTCTTGGCTGC AGCAGCCTGACGCTATTTTGGTTGTTTGGGACAGACCAGCAAGTGCACCC ACGTGCTACTATCGTCAGATTTCAGAGACTTCACGCTGTCTCGATGGTGC CTCTCTCTCATTGGCCAAGTAGTACTTCGTCTTTCACTCCTCACAAATCT CAGATTTCAACGCCGTTGTCTCTGCAATCTTCTGCTTTCGATTTCTGTTT TATGCATATTTAAAAAGGAATTACACAGGGGGCTTCGTTCATGGAATATG TCGTTCACCCCCCTACTGCAGAGGGGTTTCTATCCACGGTGCCTCTTGCA CAATTATTTAGAAATTAGACTCCCCCCCCCCCACGGACACCGATTTCGGT TAGTAGGCCTATGTGTCCGATCGCCAATCTCCCCAGGATGGACCCTATCC ACTCCCCCCCACCAGTTGAAGCAAAGAGGATTGTCACAAGGCAACTTGGT ACTTGCACTGTTACGTGCCGGTTCCACACATCTCGCACTCTCGTCGCCCG ACGCTGTTACCGAGGAATAACCCCTCTTCTTCGCCGTGAAGTTAAAGTTC CTGCACGCACAATTGGGCCCACCGCCCCCCGCCCCCCCACCCCGAATGTT CTTTGACGGCCCTCGACTGTGTTGCAGGGTCGGCTGAAGTGCACGGGGCG CACGGTGCACGCCAAGGGAAGGTTCTTCACGCTGTACGCGGACAAGGCTG CCGGCCGCGCTACCCGCATGGACTGCCGCGACGTGTTCGACTCCGCCGTG TTCTTCAGCACGGCGTGCTGGGTGGGAAAGAAGGAAGACAATCCGTCCGA GGAACCCCTTCCGCTGCCAGAGTCGCTGCAGGTGGGTTCGTTCGGTGACT GCTGGCTATGTGCATGTGTAACATATGCTTGTTTGCTGGTATGTGTACGA CTGCGGTTTTTTGTGTTGGCTGGCGTCTGCGTAGCCGAAAAGCGGTGTAC AAGAGCCGTCTGCTAAGATCCATGAGCCCTCCGCGAAAAATAGCACCTCC TGTGTTGCTTTCCTCCTGGTGTGACTCCCGCTGATGCATGGAGAAAACGT GCAAAAATGTATTTAATAGCTGTCGTCCAGAATATATGGAAATATCCTGG GTTTGGTTCCTTCGTTGTGCGTGGGGCGGAATTTCTTCACCGCAGCGGTG AAGTGTTATGATCACCTTCGGGCCCGACGAGCGCACAGCGGTATTGCGGC AGAACCGCAACGGTGTTCCGTCACAATACAGCGGTGTCCCGTCGGTGCTT GCTCGCTCTCACGAGGCGCGCGTGGCCTACTGCTAATGCCCTGTAGGGAG AAGATTCCTCAAACACAGAGCAAACAACACTGTGGTCTTACCTGCACCAC CACCGTTTTTCTCTCCACACGTTAATCACGCTTAGTCCCTTCGAGGAGAG GATGAACAGGCCTCAGGCGGTGGTGGCGACGACGGTGACGCCACCGGCGG GGGCGACGCCGCGCCGAAGCTCACGGCCGCCGACTTCAAGACACACTTCG GCGGTGGGAACCCGGCGTCTCTCATGTCGGGAGACTCGAAAAGCAAAGCC TCCGCGGGCAACGACGCGGGCAACGGGGAGCGGGGTGGCGGCGGCAGCGG TGGAGAGGAAAGAGAAGGGAGGTCGGCCGCGGCGGCGGGGGCAGCGACGA AGACGGTCGGCCGACGCACCAGCAGCCGTTCCACCAAGAGCACTAAGACT TACGTAGAAGAAGACTCGGATAACGGCGAGCTTGAGGACGGGAGTGGCAC CAGCAGCAGCAGCGGTGACGAAGGGGCGGGAGGAGAGAGAGGAGGGGCCG ACGATGGAGACGAGGACGTCGTTGCCGTTGAGGGAGGAAGCAGTGGTAGC AGCAAGAACGGCGGTGGTGGCAGCGGCAGCGGCAGCGGCAGCGGTAGCGG TAGCGGTGCCGGAGGGGTGGAGGCGTTCTCTATCCTCAACGCGCCGGGCA CGGCGAAGAGGAAGCCGGTCACGGTGGGCTCCGGCAAGGAGGAGAAGAAC GCGCCGGCCTCGAGCAAGAAGAGAAAGGCCGGCGCCGGCAGCGCTAAAGG GAAAGGCCGCCGCCGAGCGCTGGCGAGCTCCGGGTCTTCGTCGTCGAGCG ATGACGATGACGATAAGGGTGGTAGCGGAGAAGAGAACGGGGGTACCGGT GAGGAGTCTCCGGCTTCGGGGGAGGACGTGGCGGCGGCGGCGGTGGCGAT GAGATCGGGTCCCGCGAGAAGGAGCAGCCGGTCTAGCGCCGTGTCGCGGG TTAAGTACACCCAGAGCAGCAGCGGTTCCGAGGAGGAGGATGAAGAGAAA GAGGAAGAGGAAGAGGAAGGAGGTGATGGGGGTGATGATGATGATGATGA TGATGAGTTCGAGCCGTAG
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig10:668070..671138-

>mRNA_Ecto-sp6_S_contig10.482.1 ID=mRNA_Ecto-sp6_S_contig10.482.1|Name=mRNA_Ecto-sp6_S_contig10.482.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1617bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:668070..671138- (Ectocarpus species6 EcLAC_371)
ATGAGCAAAAAGCGAGAGAGGGACGGCGGCGGCAGTGACACGTTCCAGCA
CGACAACGGCGCAGAATCGCTCCTGTTTGAAATCGCTCCGCCTCCCGAAG
ACAGGACGACCAAGCGCAGCAAGAAGAGCAGTGCTGCTGACGCCCCTCTG
CCGCCGCAAGAGTCTGCGGGCAGTGCCGGCGACGGCAACAATAATGTGGC
AAGCACAGCAGAGCCGAGCAAGTATCACCCGGCAGCCATCGCACCGTCTT
CCACCCTTCGGCAATGCGACGGCTTGAATGTCGTGAAGAACAAGGCGCGG
GGACGAGGGCGGCAGCTCATGGTACTGCCCGGCGCGCTCGGCCTCGGCAA
CGGCAGTACCGGCGGCAAACTTGGGACGCTGAACAATACCACACCAGCGA
ACCCCGTGCTGTACGTGGAGTTTCCCGAGGGTCGGCTGAAGTGCACGGGG
CGCACGGTGCACGCCAAGGGAAGGTTCTTCACGCTGTACGCGGACAAGGC
TGCCGGCCGCGCTACCCGCATGGACTGCCGCGACGTGTTCGACTCCGCCG
TGTTCTTCAGCACGGCGTGCTGGGTGGGAAAGAAGGAAGACAATCCGTCC
GAGGAACCCCTTCCGCTGCCAGAGTCGCTGCAGTCCCTTCGAGGAGAGGA
TGAACAGGCCTCAGGCGGTGGTGGCGACGACGGTGACGCCACCGGCGGGG
GCGACGCCGCGCCGAAGCTCACGGCCGCCGACTTCAAGACACACTTCGGC
GGTGGGAACCCGGCGTCTCTCATGTCGGGAGACTCGAAAAGCAAAGCCTC
CGCGGGCAACGACGCGGGCAACGGGGAGCGGGGTGGCGGCGGCAGCGGTG
GAGAGGAAAGAGAAGGGAGGTCGGCCGCGGCGGCGGGGGCAGCGACGAAG
ACGGTCGGCCGACGCACCAGCAGCCGTTCCACCAAGAGCACTAAGACTTA
CGTAGAAGAAGACTCGGATAACGGCGAGCTTGAGGACGGGAGTGGCACCA
GCAGCAGCAGCGGTGACGAAGGGGCGGGAGGAGAGAGAGGAGGGGCCGAC
GATGGAGACGAGGACGTCGTTGCCGTTGAGGGAGGAAGCAGTGGTAGCAG
CAAGAACGGCGGTGGTGGCAGCGGCAGCGGCAGCGGCAGCGGTAGCGGTA
GCGGTGCCGGAGGGGTGGAGGCGTTCTCTATCCTCAACGCGCCGGGCACG
GCGAAGAGGAAGCCGGTCACGGTGGGCTCCGGCAAGGAGGAGAAGAACGC
GCCGGCCTCGAGCAAGAAGAGAAAGGCCGGCGCCGGCAGCGCTAAAGGGA
AAGGCCGCCGCCGAGCGCTGGCGAGCTCCGGGTCTTCGTCGTCGAGCGAT
GACGATGACGATAAGGGTGGTAGCGGAGAAGAGAACGGGGGTACCGGTGA
GGAGTCTCCGGCTTCGGGGGAGGACGTGGCGGCGGCGGCGGTGGCGATGA
GATCGGGTCCCGCGAGAAGGAGCAGCCGGTCTAGCGCCGTGTCGCGGGTT
AAGTACACCCAGAGCAGCAGCGGTTCCGAGGAGGAGGATGAAGAGAAAGA
GGAAGAGGAAGAGGAAGGAGGTGATGGGGGTGATGATGATGATGATGATG
ATGAGTTCGAGCCGTAG
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