mRNA_Ecto-sp6_S_contig10.454.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.454.1 vs. uniprot
Match: D7G906_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G906_ECTSI) HSP 1 Score: 251 bits (642), Expect = 1.640e-84 Identity = 127/130 (97.69%), Postives = 128/130 (98.46%), Query Frame = 1
Query: 1 MLAAFARNPRLCVPAAVKVCAEFPLRAISVAGSDSRACYWPLEQRRGLSNGSDSPREDAIASILESKIEASKAVVHDISGGCGSMYKIEVESPLFRGKGLVAQHRMVKAALATEIADMHGLTLLTRPSPP 390
M AAFARNPRLCVPAAVK CAEFPLRAI+VAGSDSRACYWPLEQRRGLSNGSDSPREDAIASILESKIEASKAVVHDISGGCGSMYKIEVESPLFRGKGLVAQHRMVKAALATEIADMHGLTLLTRPSPP
Sbjct: 1 MWAAFARNPRLCVPAAVKACAEFPLRAIAVAGSDSRACYWPLEQRRGLSNGSDSPREDAIASILESKIEASKAVVHDISGGCGSMYKIEVESPLFRGKGLVAQHRMVKAALATEIADMHGLTLLTRPSPP 130
BLAST of mRNA_Ecto-sp6_S_contig10.454.1 vs. uniprot
Match: A0A7S2CEL3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CEL3_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 1.960e-22 Identity = 58/131 (44.27%), Postives = 73/131 (55.73%), Query Frame = 1
Query: 1 MLAAFARNPRLCVPAAVKVCAEFP--LRAISVAGSDSRACYWPLEQRRGLSNGSDSPREDAIASILESKIEASKAVVHDISGGCGSMYKIEVESPLFRGKGLVAQHRMVKAALATEIADMHGLTLLTRPSP 387
ML A R+ +PA C P L A+ G + P+ S+ P+ED + L + +E + +V D+SGGCGSMYKIEVESPLFRG LV QHRMV L EI +MHGLT+ TR SP
Sbjct: 11 MLRAIGRSAAAAIPARQAPCVVAPSSLPALPALGG---VLHRPMS--------SEVPKEDLMKEALIAALEPTDVLVEDVSGGCGSMYKIEVESPLFRGVNLVKQHRMVTDTLKKEIGEMHGLTINTRRSP 130
BLAST of mRNA_Ecto-sp6_S_contig10.454.1 vs. uniprot
Match: A0A4D9DBR1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBR1_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 1.570e-20 Identity = 41/72 (56.94%), Postives = 54/72 (75.00%), Query Frame = 1
Query: 166 REDAIASILESKIEASKAVVHDISGGCGSMYKIEVESPLFRGKGLVAQHRMVKAALATEIADMHGLTLLTRP 381
RED + ++L + + ++ D+SGGCG+MY +EVES LFRGK LVAQHRMV LA EI++MHGL+L TRP
Sbjct: 52 REDRMRALLSEHFKPTHLLIQDVSGGCGAMYNMEVESELFRGKALVAQHRMVNQVLAKEISEMHGLSLKTRP 123
BLAST of mRNA_Ecto-sp6_S_contig10.454.1 vs. uniprot
Match: A0A836CI04_9STRA (Bola protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI04_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 3.300e-20 Identity = 47/105 (44.76%), Postives = 68/105 (64.76%), Query Frame = 1
Query: 79 AISVAGSDSRACYWPLEQRRGLSNGSDSP--REDAIASILESKIEASKAVVHDISGGCGSMYKIEVESPLFRGKGLVAQHRMVKAALATEIADMHGLTLLTRPSP 387
A+ + +S ++ L Q G+++ +E A+ +L +++A+K V DISGGCGSMY I +ESPLF+G LV QH++VK+ L EIA MHGLTL T+ SP
Sbjct: 9 ALRASRQNSTYPFFRLTQTPARWQGTEAAGSQEKAMEKLLGKELKATKVTVEDISGGCGSMYSIAIESPLFKGLSLVKQHQLVKSTLKKEIAAMHGLTLQTKVSP 113
BLAST of mRNA_Ecto-sp6_S_contig10.454.1 vs. uniprot
Match: A0A1V9Y5G4_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y5G4_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 2.860e-18 Identity = 42/72 (58.33%), Postives = 49/72 (68.06%), Query Frame = 1
Query: 160 SPREDAIASILESKIEASKAVVHDISGGCGSMYKIEVESPLFRGKGLVAQHRMVKAALATEIADMHGLTLLT 375
S E+ +A L ++ A+ V DISGGCGSMYKIEV SP F GK +VAQHR+V L EIA MHGLTL T
Sbjct: 16 SAAEEKMAVALRQELSATHVKVDDISGGCGSMYKIEVASPTFEGKNVVAQHRLVNQVLKEEIAGMHGLTLKT 87
BLAST of mRNA_Ecto-sp6_S_contig10.454.1 vs. uniprot
Match: A0A8K0AJV7_ANDGO (Mitochondrial BolA domain-containing protein n=1 Tax=Andalucia godoyi TaxID=505711 RepID=A0A8K0AJV7_ANDGO) HSP 1 Score: 82.8 bits (203), Expect = 3.540e-18 Identity = 41/85 (48.24%), Postives = 56/85 (65.88%), Query Frame = 1
Query: 136 RGLSNGSDSPREDAIASILESKIEASKAVVHDISGGCGSMYKIEVESPLFRGKGLVAQHRMVKAALATEIADMHGLTLLTRPSPP 390
R LS ++ P E +I+ IL S ++ SK V DISGGCG + + VESP+FRGK +V QHRMV + L E+ MH L + T+P+ P
Sbjct: 8 RLLSTAAEGPTEASISKILRSALQPSKLNVQDISGGCGVSFAVVVESPMFRGKTIVEQHRMVNSVLKQEMEVMHALRISTKPTSP 92
BLAST of mRNA_Ecto-sp6_S_contig10.454.1 vs. uniprot
Match: A0A7S2H125_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H125_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 7.910e-18 Identity = 45/87 (51.72%), Postives = 58/87 (66.67%), Query Frame = 1
Query: 136 RGLSNGSDSP---REDAIASILESKIEASKAVVHDISGGCGSMYKIEVESPLFRGKGLVAQHRMVKAALATEIADMHGLTLLTRPSP 387
R LS GS+S +E+++ L + AS V DISGGCG+MYK+EVESP FRG ++ QHR+V L EI +MHGLTL TR +P
Sbjct: 25 RILSIGSESDGVSKEESMRLALSQALNASFVSVDDISGGCGAMYKLEVESPDFRGLNMLKQHRLVTQVLKKEIGEMHGLTLQTRVTP 111
BLAST of mRNA_Ecto-sp6_S_contig10.454.1 vs. uniprot
Match: A0A067C2D2_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C2D2_SAPPC) HSP 1 Score: 81.3 bits (199), Expect = 1.720e-17 Identity = 42/81 (51.85%), Postives = 50/81 (61.73%), Query Frame = 1
Query: 133 RRGLSNGSDSPREDAIASILESKIEASKAVVHDISGGCGSMYKIEVESPLFRGKGLVAQHRMVKAALATEIADMHGLTLLT 375
R + G + E+ +A+ L + A+ V DISGGCGSMYKIEV SP F GK VAQHR+V L EI MHGLTL T
Sbjct: 11 RPASARGLSTTAEEKMATSLRQALSATHVKVDDISGGCGSMYKIEVASPTFEGKNRVAQHRLVNEVLKEEIGGMHGLTLKT 91
BLAST of mRNA_Ecto-sp6_S_contig10.454.1 vs. uniprot
Match: A0A369SM06_9METZ (BolA-like protein 3 n=1 Tax=Trichoplax sp. H2 TaxID=287889 RepID=A0A369SM06_9METZ) HSP 1 Score: 82.4 bits (202), Expect = 2.720e-17 Identity = 50/111 (45.05%), Postives = 66/111 (59.46%), Query Frame = 1
Query: 64 EFPLRAISVAGSDSRACYWPL----EQRRGLSNGSD---SPREDAIASILESKIEASKAVVHDISGGCGSMYKIEVESPLFRGKGLVAQHRMVKAALATEIADMHGLTLLT 375
E P+ ++ +R W L RR LS+ D S E I+SIL+ + S V DISGGCGSMY+I ++S F+GK ++ QHRMVK ALA EI +MHGLT+ T
Sbjct: 50 ELPINTNTLRSESNR---WLLLANNVSRRCLSSQPDLKQSKGEQHISSILKDTVNPSYLEVRDISGGCGSMYEILIQSDNFKGKSIIQQHRMVKEALAEEIKNMHGLTIRT 157
BLAST of mRNA_Ecto-sp6_S_contig10.454.1 vs. uniprot
Match: B3S7G9_TRIAD (Uncharacterized protein n=1 Tax=Trichoplax adhaerens TaxID=10228 RepID=B3S7G9_TRIAD) HSP 1 Score: 80.5 bits (197), Expect = 5.120e-17 Identity = 39/69 (56.52%), Postives = 50/69 (72.46%), Query Frame = 1
Query: 169 EDAIASILESKIEASKAVVHDISGGCGSMYKIEVESPLFRGKGLVAQHRMVKAALATEIADMHGLTLLT 375
E I+SIL+ + S V DISGGCGSMY+I ++S F+GK ++ QHRMVK ALA EI +MHGLT+ T
Sbjct: 45 EQHISSILKDTVNPSYLEVRDISGGCGSMYEILIQSDNFKGKSIIQQHRMVKEALAEEIKNMHGLTIRT 113 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.454.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig10.454.1 >prot_Ecto-sp6_S_contig10.454.1 ID=prot_Ecto-sp6_S_contig10.454.1|Name=mRNA_Ecto-sp6_S_contig10.454.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=131bp MLAAFARNPRLCVPAAVKVCAEFPLRAISVAGSDSRACYWPLEQRRGLSNback to top mRNA from alignment at Ecto-sp6_S_contig10:349054..350637+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig10.454.1 ID=mRNA_Ecto-sp6_S_contig10.454.1|Name=mRNA_Ecto-sp6_S_contig10.454.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=1584bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:349054..350637+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig10:349054..350637+ >mRNA_Ecto-sp6_S_contig10.454.1 ID=mRNA_Ecto-sp6_S_contig10.454.1|Name=mRNA_Ecto-sp6_S_contig10.454.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=393bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:349054..350637+ (Ectocarpus species6 EcLAC_371)back to top |