mRNA_Ecto-sp6_S_contig10.447.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig10.447.1
Unique NamemRNA_Ecto-sp6_S_contig10.447.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.447.1 vs. uniprot
Match: D7G912_ECTSI (Serine/threonine-protein phosphatase 2A activator n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G912_ECTSI)

HSP 1 Score: 733 bits (1891), Expect = 8.850e-262
Identity = 355/360 (98.61%), Postives = 357/360 (99.17%), Query Frame = 1
Query:  118 MTFRVPVRAIRTVADLNHFKQSPTYKELMTFIRLCNDAVMGVRASSLQLNTPDTAMDTVSRIVGMLRQMGSWVDDIPPIDEPMRFGNKAFRSWYQRLEQEAGGMVDTLLEGTGNEAAAVELVPYLLVSFGHPSRIDYGTGHETSFVVWLCCLFKLGSLTKEDLAPAILQVFYSYLQVMRRLQSVYMLEPAGSHGVWGLDDYHCLPFLWGSAQLIDHPSIKPHDVLDDNVLDEGKHDYLYLGAIDFIKSLKKGAAFGECCPMLNDISQLPSWKKVNTGMQRLYEGDVLGKMPVIQHFLFGSLLPCTWEPSPAPAVNPVAVSSFGGRAPWAKGAPAPPDVHTLGAAKATSANTQPTHQHTST 1197
            MTFRVPVRAIRTV DLNHFKQSPTYKELMTFIRLCNDAVMGVRASSLQL+TPDTAMDTVSRIV MLRQMGSWVDDIPPIDEPMRFGNKAFRSWYQRLEQEAGGMVDTLLEGTG+EAAAVELVPYLLVSFGHPSRIDYGTGHETSFVVWLCCLFKLGSLTKEDLAPAILQVFYSYLQVMRRLQSVYMLEPAGSHGVWGLDDYHCLPFLWGSAQLIDHPSIKPHDVLDDNVLDEGKHDYLYLGAIDFIKSLKKGAAFGECCPMLNDISQLPSWKKVNTGMQRLYEGDVLGKMPVIQHFLFGSLLPCTWEPSPAPAVNPVAVSSFGGRAPWAKGAPAPPDVHTLGAAKATSANTQPT QHTST
Sbjct:    1 MTFRVPVRAIRTVTDLNHFKQSPTYKELMTFIRLCNDAVMGVRASSLQLDTPDTAMDTVSRIVRMLRQMGSWVDDIPPIDEPMRFGNKAFRSWYQRLEQEAGGMVDTLLEGTGHEAAAVELVPYLLVSFGHPSRIDYGTGHETSFVVWLCCLFKLGSLTKEDLAPAILQVFYSYLQVMRRLQSVYMLEPAGSHGVWGLDDYHCLPFLWGSAQLIDHPSIKPHDVLDDNVLDEGKHDYLYLGAIDFIKSLKKGAAFGECCPMLNDISQLPSWKKVNTGMQRLYEGDVLGKMPVIQHFLFGSLLPCTWEPSPAPAVNPVAVSSFGGRAPWAKGAPAPPDVHTLGAAKATSANTQPTRQHTST 360          
BLAST of mRNA_Ecto-sp6_S_contig10.447.1 vs. uniprot
Match: A0A7S3Y2V7_HETAK (Serine/threonine-protein phosphatase 2A activator n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2V7_HETAK)

HSP 1 Score: 380 bits (977), Expect = 1.170e-121
Identity = 175/314 (55.73%), Postives = 233/314 (74.20%), Query Frame = 1
Query:  112 ASMTFRVPVRAIRTVADLNHFKQSPTYKELMTFIRLCNDAVMGVRASSLQLNTPDTAMDTVSRIVGMLRQMGSWVDDIPPIDEPMRFGNKAFRSWYQRLEQEAGGMVDTLLEGTGNEAAAVELVPYLLVSFGHPSRIDYGTGHETSFVVWLCCLFKLGSLTKEDLAPAILQVFYSYLQVMRRLQSVYMLEPAGSHGVWGLDDYHCLPFLWGSAQLIDHPSIKPHDVLDDNVLDEGKHDYLYLGAIDFIKSLKKGAAFGECCPMLNDISQLPSWKKVNTGMQRLYEGDVLGKMPVIQHFLFGSLLPCTWEPSPAP 1053
            + + F++P RAI  + DL HF +S TY ELM FIR+CN+ V G++ S +Q ++     + +  ++G+L  +  WV + PP+ +PMRFGNKAFR+W+ +L +E+  +V  LL       A++EL PYL  SFG+ +RIDYGTGHET+FVV+LCCLFKL  L + DL  A+L+VF  YL++  RLQ+ Y++EPAGSHGVWGLDDYHCLPFLWG+AQL+ HPSI+P  + DD+++ E K +YLYL  IDF+K LKKGA F E  PMLNDIS +P W+KVNTGM RLYEG+VLGK PVIQHFLFG++LP +W P+  P
Sbjct:   84 SDVEFQIPGRAIYNIQDLQHFSKSRTYSELMMFIRICNEKVKGLKVSDIQEHS-----EIIGGLLGLLDTLEGWVGEHPPLQQPMRFGNKAFRAWHAQLVEESPALVRALLPAKV-AGASLELSPYLCTSFGNETRIDYGTGHETNFVVFLCCLFKLKVLPRADLPAAVLRVFARYLRLCHRLQAAYVMEPAGSHGVWGLDDYHCLPFLWGAAQLVGHPSIEPSSIHDDSIIRENKDEYLYLSGIDFVKQLKKGAPFAESSPMLNDISAIPQWRKVNTGMFRLYEGEVLGKFPVIQHFLFGNILPASWVPAAVP 391          
BLAST of mRNA_Ecto-sp6_S_contig10.447.1 vs. uniprot
Match: A0A6G0X172_9STRA (Serine/threonine-protein phosphatase 2A activator n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X172_9STRA)

HSP 1 Score: 350 bits (898), Expect = 1.090e-111
Identity = 166/309 (53.72%), Postives = 218/309 (70.55%), Query Frame = 1
Query:  118 MTFRVPVRAIRTVADLNHFKQSPTYKELMTFIRLCNDAVMGVRASSLQLNTPDTAMDTVSRIVGMLRQMGSWVDDIPPIDEPMRFGNKAFRSWYQRLEQEAGGMVDTLLEGTGNEAAAVELVPYLLVSFGHPSRIDYGTGHETSFVVWLCCLFKLGSLTKEDLAPAILQVFYSYLQVMRRLQSVYMLEPAGSHGVWGLDDYHCLPFLWGSAQLIDHPSIKPHDVLDDNVLDEGKHDYLYLGAIDFIKSLKKGAAFGECCPMLNDISQLPSWKKVNTGMQRLYEGDVLGKMPVIQHFLFGSLLPCTWEPS 1044
            MTF +P RAI + ADL HF +S TY+ +M F++  N++V G +     L         V  +  +L  + +W+D+IPPI +PMRFGNKAFR WY RL  ++  M + +L+ T  +AAA+EL PYL+ SFG+  RIDYGTGHETSF++WLC L K+G L++ D    +L++F++YL VMRRLQ VYMLEPAGSHGVWGLDDY CLPF +GS+QLI   S  P  V DD+VL     +YLYL A+ F++ +K   +F E  PMLNDIS + SW+K+N GM +LYEG+VL K PVIQH LFGSL+PCTW+PS
Sbjct:    1 MTFVIPQRAIFSEADLRHFVRSNTYEMIMIFVKALNESVKGKK-----LTDEIPVSQNVESVCTLLATLSTWIDEIPPIAQPMRFGNKAFRDWYDRLVDQSPRMHEAMLQPTELKAAAIELCPYLIDSFGNRVRIDYGTGHETSFILWLCGLHKIGFLSQSDFPAIVLKIFHTYLTVMRRLQKVYMLEPAGSHGVWGLDDYQCLPFYFGSSQLIGQTSFAPSCVHDDSVLQSHSTEYLYLDAVRFVREVKSSGSFAETSPMLNDISGVHSWEKINGGMLKLYEGEVLKKFPVIQHLLFGSLIPCTWKPS 304          
BLAST of mRNA_Ecto-sp6_S_contig10.447.1 vs. uniprot
Match: A0A835YQF2_9STRA (Serine/threonine-protein phosphatase 2A activator n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQF2_9STRA)

HSP 1 Score: 350 bits (898), Expect = 8.280e-111
Identity = 184/349 (52.72%), Postives = 225/349 (64.47%), Query Frame = 1
Query:  112 ASMTFRVPVRAIRTVADLNHFKQSPTYKELMTFIRLCNDAVMGVRASSLQLNTPDTAMDTVSRIVGMLRQMGSWVDDIPPIDEPMRFGNKAFRSWYQRLEQEAGGMVDTLLEGTGNEAAAV-ELVPYLLVSFGHPSRIDYGTGHETSFVVWLCCLFKLGSLTKEDLAPAILQVFYSYLQVMRRLQSVYMLEPAGSHGVWGLDDYHCLPFLWGSAQLIDHPSIKPHDVLDDNVLDEGKHDYLYLGAIDFIKSLKKGAAFGECCPMLNDISQLPSWKK-------VNTGMQRLYEGDVLGKMPVIQHFLFGSLLPCTWE-PSPA-----PAVNPVAVSSFG----GRAPWA 1104
            AS  ++VP RAI   +D++ F  S TY + + F+R C +AV     SS Q          V +I  ML +M  WV + PP+ +PMRFGNKAF SW+ RL  EA  M+  LL     EA AV EL+PYL  SFGH  RIDYGTGHET F VWLCCL K+G + +EDL   +L+ F  YL+VMR L   Y+LEPAGSHGVWGLDDYHCLPF+WG+AQLIDH S+ P  V ++  L E   D++Y+GA+ F   LK GA F ECCPMLNDIS LPSWKK       V +GM +LYEG+VL K+PV+QHFLFGSLLP TW+ P  A     P + P A   F      +APWA
Sbjct:    7 ASQEWKVPTRAIFNASDVHKFSTSRTYADYLGFVRKCGEAVKAKGISSGQY----PVSPAVEKIEKMLGEMEGWVAEYPPLKQPMRFGNKAFCSWHSRLVSEAPRMMAALLPKELAEAGAVRELLPYLCSSFGHEQRIDYGTGHETQFAVWLCCLVKIGVMAEEDLPALVLRCFMGYLRVMRLLHKSYVLEPAGSHGVWGLDDYHCLPFVWGAAQLIDHASLTPLSVTNEETLVEFSDDWMYIGALKFAWDLKSGAPFAECCPMLNDISALPSWKKLCILLCVVYSGMLKLYEGEVLQKLPVVQHFLFGSLLPATWQQPGSAEAHKPPPIPPPASPGFDPYIDAQAPWA 351          
BLAST of mRNA_Ecto-sp6_S_contig10.447.1 vs. uniprot
Match: A0A1V9ZAS4_9STRA (Serine/threonine-protein phosphatase 2A activator n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZAS4_9STRA)

HSP 1 Score: 347 bits (890), Expect = 1.950e-110
Identity = 178/367 (48.50%), Postives = 241/367 (65.67%), Query Frame = 1
Query:  124 FRVPVRAIRTVADLNHFKQSPTYKELMTFIRLCNDAVMGVRASSLQLNTPDTAMDTVSRIVGMLRQMGSWVDDIPPIDEPMRFGNKAFRSWYQRLEQEAGGMVDTLLEGTGNEAAAVELVPYLLVSFGHPSRIDYGTGHETSFVVWLCCLFKLGSLTKEDLAPAILQVFYSYLQVMRRLQSVYMLEPAGSHGVWGLDDYHCLPFLWGSAQLIDHPSIKPHDVLDDNVLDEGKHDYLYLGAIDFIKSLKKGAAFGECCPMLNDISQLPSWKKVNTGMQRLYEGDVLGKMPVIQHFLFGSLLPCTWEPSPA--PAVNPVAVSSFG---------GRAPWAKGAPAPPDVHTLGAAKATSANTQPTHQHT 1191
            F++P RAI + AD+  F  S  Y+  + FI+  N++V G + S           D+++ I  +L  + SW+DDIPPI +PMRFGNKAFR WY RL QEA  + + LL   G +AAAVEL PYL+ SFG+ +RIDYGTGHET+F++W+C L K+G + + D    +L+VF++YL +MRRLQ  YMLEPAGSHGVWGLDDY CLPF +GSAQLI    + P  V DD++L     DYLYL A+ F++ +K  ++F E  PMLNDIS + SW+K+N+GM +LYEG+VL K+PVIQH LFGSL+PC+W PS +   +  PV+ ++           G+APWA  A        L A+  T A  +P H+ T
Sbjct:    7 FKLPERAIFSEADMRKFIASDAYERHLIFIKHLNESVRGKKISD-----DFVVSDSINAICDLLATLDSWIDDIPPIAQPMRFGNKAFRDWYDRLAQEAHRLHEGLLAQIGMQAAAVELSPYLIDSFGNRTRIDYGTGHETTFLLWICALHKVGFIAQADFPAIVLKVFHTYLTLMRRLQKTYMLEPAGSHGVWGLDDYQCLPFYFGSAQLIGQHVLAPSCVHDDSLLAAHSSDYLYLDAVRFVREVKAASSFAETSPMLNDISGVHSWEKINSGMLKLYEGEVLKKLPVIQHMLFGSLIPCSWVPSQSGDASYKPVSTAAVRAANANWEAMGKAPWAAAA------GNLAASNDTPAVVRPDHEQT 362          
BLAST of mRNA_Ecto-sp6_S_contig10.447.1 vs. uniprot
Match: A0A067CTR9_SAPPC (Serine/threonine-protein phosphatase 2A activator n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CTR9_SAPPC)

HSP 1 Score: 344 bits (883), Expect = 1.830e-109
Identity = 168/339 (49.56%), Postives = 231/339 (68.14%), Query Frame = 1
Query:  121 TFRVPVRAIRTVADLNHFKQSPTYKELMTFIRLCNDAVMGVRASSLQLNTPDTAMDTVSRIVGMLRQMGSWVDDIPPIDEPMRFGNKAFRSWYQRLEQEAGGMVDTLLEGTGNEAAAVELVPYLLVSFGHPSRIDYGTGHETSFVVWLCCLFKLGSLTKEDLAPAILQVFYSYLQVMRRLQSVYMLEPAGSHGVWGLDDYHCLPFLWGSAQLIDHPSIKPHDVLDDNVLDEGKHDYLYLGAIDFIKSLKKGAAFGECCPMLNDISQLPSWKKVNTGMQRLYEGDVLGKMPVIQHFLFGSLLPCTWEPSPA--PAVNPVAVSSFG---------GRAPWA 1104
            +F++P RAI + AD+  F  S  Y+  + FI+  N++V G +     L    T    V  + G+L  + SW+D+IPPID+PMRFGNKAFR WY RL QEA  +  +LL   G + AA+EL PYL+ SFG+ +RIDYGTGHET+F++W+C L K+G +++ D    +L+VF++YL +MRRLQ  YMLEPAGSHGVWGLDDY CLPF +GS+QLI   ++ P  V DD +L     DYLYL A+ F++ +K  ++F E  PMLNDIS + SW+K+N+GM +LYEG+VL K+PVIQH LFGSL+PC+W PS +   +  PV+ ++           G+APWA
Sbjct:    6 SFQLPQRAIFSEADMRQFLASDAYERHLVFIKHLNESVRGKK-----LTDEYTVSPNVEALCGLLATLNSWIDEIPPIDQPMRFGNKAFRDWYDRLAQEAPKLHASLLASIGMQDAAIELSPYLIDSFGNRTRIDYGTGHETTFMLWICTLHKIGFVSQADFPAVVLKVFHTYLTLMRRLQKTYMLEPAGSHGVWGLDDYQCLPFYFGSSQLIGQRNLAPSVVHDDGLLAAHSPDYLYLDAVKFVREVKAASSFAETSPMLNDISGVHSWEKINSGMLKLYEGEVLKKLPVIQHMLFGSLIPCSWVPSQSGDSSYTPVSTTAVRAANANWNAMGKAPWA 339          
BLAST of mRNA_Ecto-sp6_S_contig10.447.1 vs. uniprot
Match: A0A7S2S7E8_9STRA (Serine/threonine-protein phosphatase 2A activator n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S7E8_9STRA)

HSP 1 Score: 340 bits (871), Expect = 1.980e-107
Identity = 165/313 (52.72%), Postives = 219/313 (69.97%), Query Frame = 1
Query:  133 PVRAIRTVADLNHFKQSPTYKELMTFIRLCNDAVMGVRASSLQLNTPDTAMDTVSRIVGMLRQMGSWVDDIPPIDEPMRFGNKAFRSWYQRLEQEAGGMVDTLLEGTGNEAAAVELVPYLLVSFGHPSRIDYGTGHETSFVVWLCCLFKLGSLTKEDLAPAILQVFYSYLQVMRRLQSVYMLEPAGSHGVWGLDDYHCLPFLWGSAQLIDHPSIKPHDVLDDNVLDEGKHDYLYLGAIDFIKSLKKGAAFGECCPMLNDISQLPSWKKVNTGMQRLYEGDVLGKMPVIQHFLFGSLLPCTWEPSPAPAVNPVA 1071
            P R I T  DL  FK S    EL+ F+R+ N++ MG     +     D    ++ ++V +L ++ SW+ +IPPI++PMRFGN+AFR W+ RL +    +V  LL+  G + A++ELVPYLL SFG+P+RIDYGTGHET+F+ +L C+ KLG L  ED +  +L +F  Y+++MR LQ+ Y+LEPAGSHGVWGLDDYHCLPFL+GSAQL+DH SI P  V DD  ++  + +YLYL  I  IK +K GA F E  PML+ ISQLP+W+KVNTGM +LY+ +VL K+PVIQHFLFG L+PCTW    A AV P A
Sbjct:   32 PRREIFTDMDLRAFKSSDACNELVRFVRVLNESAMGKTIGDMS----DPVSPSIHKVVTLLSELESWIAEIPPIEQPMRFGNRAFRDWHARLVERGPDLVKPLLQD-GQKNASMELVPYLLDSFGNPTRIDYGTGHETTFISFLYCISKLGQLGPEDASAIVLCIFARYMRLMRALQTTYLLEPAGSHGVWGLDDYHCLPFLFGSAQLVDHSSIVPSTVHDDEEVNTRRTEYLYLDCIGAIKEMKTGAPFSETSPMLHSISQLPNWRKVNTGMLKLYDAEVLSKLPVIQHFLFGRLIPCTWRA--ADAVRPAA 337          
BLAST of mRNA_Ecto-sp6_S_contig10.447.1 vs. uniprot
Match: A0A6A3NW83_9STRA (Serine/threonine-protein phosphatase 2A activator n=35 Tax=Phytophthora TaxID=4783 RepID=A0A6A3NW83_9STRA)

HSP 1 Score: 337 bits (865), Expect = 6.380e-107
Identity = 166/309 (53.72%), Postives = 211/309 (68.28%), Query Frame = 1
Query:  124 FRVPVRAIRTVADLNHFKQSPTYKELMTFIRLCNDAVMGVRASSLQLNTPDTAMDTVSRIVGMLRQMGSWVDDIPPIDEPMRFGNKAFRSWYQRLEQEAGGMVDTLLEGTGNEAAAVELVPYLLVSFGHPSRIDYGTGHETSFVVWLCCLFKLGSLTKEDLAPAILQVFYSYLQVMRRLQSVYMLEPAGSHGVWGLDDYHCLPFLWGSAQLIDHPSIKPHDVLDDNVLDEGKHDYLYLGAIDFIKSLKKGAAFGECCPMLNDISQLPSWKKVNTGMQRLYEGDVLGKMPVIQHFLFGSLLPCTWEPSPA 1050
            F+ P RAI   +DL HF  SP  + ++ F++  N++V G R SS    +P+     V + V +L ++ SW+D+IPPI +PMRFGNKAFR++Y R+ +    M + +L       A VEL  YL  SFG+  RIDYGTGHETSF+VW+CCL KLG   + D    +L++F +YL +MRRLQ +YMLEPAGSHGVWGLDDYHCLPF +GS+QLI    I P  V DD+VL     DYLYL AI FIK +K G+ F E  PMLNDIS LP+W+K N GM +LYEG+VL K+PVIQH  FG+L PCTW PS A
Sbjct:   10 FKEPSRAIFAQSDLRHFLGSPAQQMILVFVKHLNESVKGKRISSEYEVSPN-----VQKAVDLLGEINSWIDEIPPIQQPMRFGNKAFRTFYDRVAERTPAMQENMLPEE-LRGAVVELAAYLDDSFGNRVRIDYGTGHETSFIVWMCCLHKLGFFKQSDFPALVLRLFTTYLALMRRLQKLYMLEPAGSHGVWGLDDYHCLPFYFGSSQLIGQHEILPESVHDDSVLAANHEDYLYLDAIKFIKEVKAGSPFAETSPMLNDISALPTWEKTNGGMLKLYEGEVLKKLPVIQHLRFGTLFPCTWTPSHA 312          
BLAST of mRNA_Ecto-sp6_S_contig10.447.1 vs. uniprot
Match: A0A6A3THZ0_9STRA (Serine/threonine-protein phosphatase 2A activator n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3THZ0_9STRA)

HSP 1 Score: 337 bits (864), Expect = 9.300e-107
Identity = 166/309 (53.72%), Postives = 211/309 (68.28%), Query Frame = 1
Query:  124 FRVPVRAIRTVADLNHFKQSPTYKELMTFIRLCNDAVMGVRASSLQLNTPDTAMDTVSRIVGMLRQMGSWVDDIPPIDEPMRFGNKAFRSWYQRLEQEAGGMVDTLLEGTGNEAAAVELVPYLLVSFGHPSRIDYGTGHETSFVVWLCCLFKLGSLTKEDLAPAILQVFYSYLQVMRRLQSVYMLEPAGSHGVWGLDDYHCLPFLWGSAQLIDHPSIKPHDVLDDNVLDEGKHDYLYLGAIDFIKSLKKGAAFGECCPMLNDISQLPSWKKVNTGMQRLYEGDVLGKMPVIQHFLFGSLLPCTWEPSPA 1050
            F+ P RAI   +DL HF  SP  + ++ F++  N++V G R SS    +P+     V + V +L ++ SW+D+IPPI +PMRFGNKAFR++Y R+ +    M + +L       A VEL  YL  SFG+  RIDYGTGHETSF+VW+CCL KLG   + D    +L++F +YL +MRRLQ +YMLEPAGSHGVWGLDDYHCLPF +GS+QLI    I P  V DD+VL     DYLYL AI FIK +K G+ F E  PMLNDIS LP+W+K N GM +LYEG+VL K+PVIQH  FG+L PCTW PS A
Sbjct:   10 FKGPSRAIFAQSDLRHFLGSPAQQMILVFVKHLNESVKGKRISSEYEVSPN-----VQKAVDLLSEINSWIDEIPPIQQPMRFGNKAFRTFYDRVAERTPAMQENMLPEE-LRGAVVELAAYLDDSFGNRVRIDYGTGHETSFIVWMCCLHKLGFFKQSDFPALVLRLFTTYLALMRRLQKLYMLEPAGSHGVWGLDDYHCLPFYFGSSQLIGQNEILPDSVHDDSVLAANHEDYLYLDAIKFIKEVKAGSPFAETSPMLNDISALPTWEKTNGGMLKLYEGEVLKKLPVIQHLRFGTLFPCTWTPSHA 312          
BLAST of mRNA_Ecto-sp6_S_contig10.447.1 vs. uniprot
Match: A0A8K1CTU8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTU8_PYTOL)

HSP 1 Score: 334 bits (857), Expect = 1.630e-105
Identity = 169/326 (51.84%), Postives = 222/326 (68.10%), Query Frame = 1
Query:  133 PVRAIRTVADLNHFKQSPTYKELMTFIRLCNDAVMGVRASS-LQLNTPDTAMDTVSRIVGMLRQMGSWVDDIPPIDEPMRFGNKAFRSWYQRLEQEAGGMVDTLLEGTGNEAAAVELVPYLLVSFGHPSRIDYGTGHETSFVVWLCCLFKLGSLTKEDLAPAILQVFYSYLQVMRRLQSVYMLEPAGSHGVWGLDDYHCLPFLWGSAQLIDHPSIKPHDVLDDNVLDEGKHDYLYLGAIDFIKSLKKGAAFGECCPMLNDISQLPSWKKVNTGMQRLYEGDVLGKMPVIQHFLFGSLLPCTWEPSPAP---AVNPVAVSSFGGRAP 1098
            P RAI    DL  F  S  Y+ ++ F++  N++V G+R SS  Q++T       V + V +++++  W+D+IPPI +PMRFGNKAFR++Y R+ + +  ++  LL    +  A +EL  YL   FG+  RIDYGTGHETSF++WL CL K+G L +ED    +L++F +YL +MRRLQ +YMLEPAGSHGVWGLDDYHCLPF +GS+QLI      P  + DD VL    +DYLY  AI FIK +K G+ F E  PMLNDIS LPSW+K+N GM +LYEG+VL K+PVIQH +FGSLLPCTW+PS AP   A  PV+V     RAP
Sbjct:    7 PKRAIFVERDLRAFLGSKPYEMILMFVKHLNESVRGLRISSEYQVST------NVEKAVQLIQEINGWIDEIPPIQQPMRFGNKAFRTFYDRVVERSTDLLKELLPEELH-GAIIELTAYLNDCFGNRVRIDYGTGHETSFIIWLICLHKIGFLKQEDFPAVVLRLFTAYLALMRRLQKIYMLEPAGSHGVWGLDDYHCLPFYFGSSQLIGQSEFVPEAIHDDGVLQSHSNDYLYFDAIKFIKEVKAGSPFAETSPMLNDISALPSWEKINGGMLKLYEGEVLKKLPVIQHIVFGSLLPCTWKPSQAPDGSAFVPVSVHPGAVRAP 325          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.447.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G912_ECTSI8.850e-26298.61Serine/threonine-protein phosphatase 2A activator ... [more]
A0A7S3Y2V7_HETAK1.170e-12155.73Serine/threonine-protein phosphatase 2A activator ... [more]
A0A6G0X172_9STRA1.090e-11153.72Serine/threonine-protein phosphatase 2A activator ... [more]
A0A835YQF2_9STRA8.280e-11152.72Serine/threonine-protein phosphatase 2A activator ... [more]
A0A1V9ZAS4_9STRA1.950e-11048.50Serine/threonine-protein phosphatase 2A activator ... [more]
A0A067CTR9_SAPPC1.830e-10949.56Serine/threonine-protein phosphatase 2A activator ... [more]
A0A7S2S7E8_9STRA1.980e-10752.72Serine/threonine-protein phosphatase 2A activator ... [more]
A0A6A3NW83_9STRA6.380e-10753.72Serine/threonine-protein phosphatase 2A activator ... [more]
A0A6A3THZ0_9STRA9.300e-10753.72Serine/threonine-protein phosphatase 2A activator ... [more]
A0A8K1CTU8_PYTOL1.630e-10551.84Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:302115..310377 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score734.9
Seed ortholog evalue1.7e-209
Seed eggNOG ortholog2880.D7G912
Preferred nameRRD2
Model size2069
KEGG koko:K02132,ko:K17605,ko:K18464
KEGG TC3.A.2.1
KEGG Pathwayko00190,ko01100,ko04144,ko04714,ko04931,ko05010,ko05012,ko05016,map00190,map01100,map04144,map04714,map04931,map05010,map05012,map05016
KEGG ModuleM00158
Hectar predicted targeting categorymitochondrion
GOsGO:0000159,GO:0000166,GO:0000413,GO:0001101,GO:0003674,GO:0003755,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0006970,GO:0008047,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008160,GO:0008287,GO:0009056,GO:0009057,GO:0009628,GO:0009719,GO:0009725,GO:0009737,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010453,GO:0010468,GO:0010562,GO:0010563,GO:0010604,GO:0010605,GO:0010608,GO:0010629,GO:0010921,GO:0010922,GO:0010923,GO:0010941,GO:0010942,GO:0016020,GO:0016021,GO:0016567,GO:0016853,GO:0016859,GO:0017076,GO:0018193,GO:0018208,GO:0019208,GO:0019211,GO:0019220,GO:0019222,GO:0019538,GO:0019888,GO:0019899,GO:0019902,GO:0019903,GO:0019941,GO:0023052,GO:0030163,GO:0030234,GO:0030554,GO:0031224,GO:0031323,GO:0031324,GO:0031325,GO:0031399,GO:0031400,GO:0031401,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032270,GO:0032446,GO:0032515,GO:0032516,GO:0032553,GO:0032555,GO:0032559,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033993,GO:0034702,GO:0034703,GO:0034704,GO:0035303,GO:0035304,GO:0035305,GO:0035306,GO:0035307,GO:0035308,GO:0035639,GO:0036094,GO:0036211,GO:0042221,GO:0042802,GO:0042803,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043085,GO:0043086,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043632,GO:0043666,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044446,GO:0044464,GO:0045175,GO:0045595,GO:0045936,GO:0045937,GO:0046982,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051246,GO:0051247,GO:0051248,GO:0051336,GO:0051345,GO:0051346,GO:0051603,GO:0051721,GO:0060255,GO:0065007,GO:0065009,GO:0070013,GO:0070647,GO:0071704,GO:0072542,GO:0080090,GO:0097159,GO:0097305,GO:0097367,GO:0098772,GO:0098796,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901700,GO:1902494,GO:1902495,GO:1903293,GO:1904785,GO:1905933,GO:1990351
Exons9
EggNOG free text desc.phosphatase activator activity
EggNOG OGsCOG5057@1,KOG2867@2759
Ec32 ortholog descriptionPhosphotyrosyl phosphatase activator, PTPA
Ec32 orthologEc-15_002330.1
Cds size1083
COG Functional cat.DT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01009,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.447.1prot_Ecto-sp6_S_contig10.447.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig10 302984..310260 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348697.4686089-UTR-Ecto-sp6_S_contig10:302114..3029831682348697.4686089-UTR-Ecto-sp6_S_contig10:302114..302983Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig10 302115..302983 -
1682348697.563737-UTR-Ecto-sp6_S_contig10:310260..3103771682348697.563737-UTR-Ecto-sp6_S_contig10:310260..310377Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig10 310261..310377 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348697.4786036-CDS-Ecto-sp6_S_contig10:302983..3030551682348697.4786036-CDS-Ecto-sp6_S_contig10:302983..303055Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 302984..303055 -
1682348697.4857562-CDS-Ecto-sp6_S_contig10:303672..3038331682348697.4857562-CDS-Ecto-sp6_S_contig10:303672..303833Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 303673..303833 -
1682348697.4952826-CDS-Ecto-sp6_S_contig10:303969..3041221682348697.4952826-CDS-Ecto-sp6_S_contig10:303969..304122Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 303970..304122 -
1682348697.5073774-CDS-Ecto-sp6_S_contig10:304282..3044611682348697.5073774-CDS-Ecto-sp6_S_contig10:304282..304461Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 304283..304461 -
1682348697.5187297-CDS-Ecto-sp6_S_contig10:305139..3052091682348697.5187297-CDS-Ecto-sp6_S_contig10:305139..305209Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 305140..305209 -
1682348697.5276291-CDS-Ecto-sp6_S_contig10:305593..3056961682348697.5276291-CDS-Ecto-sp6_S_contig10:305593..305696Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 305594..305696 -
1682348697.5360827-CDS-Ecto-sp6_S_contig10:305976..3060491682348697.5360827-CDS-Ecto-sp6_S_contig10:305976..306049Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 305977..306049 -
1682348697.545287-CDS-Ecto-sp6_S_contig10:306235..3064381682348697.545287-CDS-Ecto-sp6_S_contig10:306235..306438Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 306236..306438 -
1682348697.5551672-CDS-Ecto-sp6_S_contig10:310191..3102601682348697.5551672-CDS-Ecto-sp6_S_contig10:310191..310260Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 310192..310260 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig10.447.1

>prot_Ecto-sp6_S_contig10.447.1 ID=prot_Ecto-sp6_S_contig10.447.1|Name=mRNA_Ecto-sp6_S_contig10.447.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=361bp
MTFRVPVRAIRTVADLNHFKQSPTYKELMTFIRLCNDAVMGVRASSLQLN
TPDTAMDTVSRIVGMLRQMGSWVDDIPPIDEPMRFGNKAFRSWYQRLEQE
AGGMVDTLLEGTGNEAAAVELVPYLLVSFGHPSRIDYGTGHETSFVVWLC
CLFKLGSLTKEDLAPAILQVFYSYLQVMRRLQSVYMLEPAGSHGVWGLDD
YHCLPFLWGSAQLIDHPSIKPHDVLDDNVLDEGKHDYLYLGAIDFIKSLK
KGAAFGECCPMLNDISQLPSWKKVNTGMQRLYEGDVLGKMPVIQHFLFGS
LLPCTWEPSPAPAVNPVAVSSFGGRAPWAKGAPAPPDVHTLGAAKATSAN
TQPTHQHTST*
back to top

mRNA from alignment at Ecto-sp6_S_contig10:302115..310377-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig10.447.1 ID=mRNA_Ecto-sp6_S_contig10.447.1|Name=mRNA_Ecto-sp6_S_contig10.447.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=8263bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:302115..310377- (Ectocarpus species6 EcLAC_371)
CGTATTCACTCATGTGCACCTAGGTTGCCAGAGTGACTACAAGTGCGCAC GCTAGTGTTATCTGCAGCAACGTCGATTTGGAAAACTGTTTCTTGTCTGC AGCTTGGGCCAGCGAGCATGACTTTTCGAGTCCCAGTTCGAGCTATAAGG ACGGTGGCAGACTTGAACCACTTCAAACAATCGCCGGTGAGTGCGAGGGA AGGGTGAATCAAGCAAGGTTCACTTGGCACTTGGCACAAAACTCCTTCTC TGTGTATCTTTGGATGCATAGTTTCGCACGTGCCATTGCATCTTCTACAG ATTAACTTCAGATGAATTACCTGCACACATTTCAGGGCGTTGATGCACAC TCAGGCAGACCCTGCACATTTAGACTATAATGCACATGAGCCATACCCAC TATAATACAATGACTGCGTTGAGAATCAATTTTACGAGAACACGCAGATG TACCAAGAGCGAATGCGAGGAAAAGATGTGTGTTGGTCCCTGCAATAGGG GCGGGAACCCGCACAGATTGTGGCAATTTCTCTCTGATATCTCGGCCAGA GGCATGACAAGCCAGTTTTACCCTCGGGCTTTTTTAAATATTCTCTCGAA GCCCTCCTATTTAGTTTTAGTAGGGACACATCGGGACACTTTCCGGACAC AGCACTCGAACGCCTATTTACTGCACCGTAGTCACCCTAGACCCCGCTGT GTGAAACGTACGTCATATCCCGTAGTCTATCATGCTTGGCTGAGGTGGTA CGCTGTGTGATATGCTGTGCGAAGCCTCTCCTCGGCCTCTGACTTGCTGT ACACCGTCTCCCAAGCCGCGTCTCCTGTATGTCGTACTAGACTGACAGGG GCGAGCTAAAAGTTTTTTGGGGTTGAAAAAACAGTACCTGCAGTAGGCTC GTGCGTTTAGGGGCAGGGGGGGTGGGGGGGGGGGGTGTACTCATAGTCGT GCATGCCTTAGTCGTTAGACCATTGACCTTGCACCCCTACACAGCCGGGA CGGAGCACGCCGGGTTCTCGCCGGACCAGGCTCTCACATCACCAAGCGCG AAGCACCGTGAGGTATTCGGCGAGTCGCATGAAGGGTGCGCAGCAGGTGT TCAGTATCTTGTGCTTACTTGCTTGCGTACGGATGACAGCTGCGTATGGC TTTATTTATTTTCTGGTGCTTTCACTTCCAGAGACAGTTGTAAGCACTGT GTAGCTGCCTCGATGCTTGACCATTTTAACACAACGTGGTGCGATCATCC CCCTTGCGCAGGGTGAGGGTTCTCGACCCCGCACAACATGATCTACTCGA CTACCATTGTGGGGGGGGGTGTTATTCACCATCAGCTTGCAACGCAAAAA AGAAAGATTCTCCCTGTTCCTCTCTCTGGTTCGAGCTCTCATCCGGCAAC TCAAAAGCGTGTTATGGGTGACCAGACTAGCACGGAAGGGACAGGTGGCA CCCTAGGCCCTCGCTCACAAGTATAGAGAAGTTTACAGCAGTACATGCAT CATGAATGGTGGTGTCTAGCAGCGTGCTGGTGTAACTCTCTCTGTCCTCT CTCTCGCTGATGGCAAAATACGCGCTGTTGTTTTGGTGTTGGTAACAATG CACAACACAACAACAACACAACCAAACACTTCTTCTTCTCTTCTCTAACT CCCCGCCGATAGCTACAGCAGCGTGTCCATGCTCCCTGTCTGTGTAGTGC GTGTCTTGCCAGCAGCAGCTGCTGAGCACAGCAGCAGCAGCGGAGAACCA AACAAGTCAGTATCGGCACAGATGCCTTCTAACTCGATGCGCTGGGCATG GATTGAGGTGGAAGCAGTTGCGATAACTCGGAGCAAAATGTTACTTAATG GGCACAAGTCTCAGACTCTCATTTGGTGCCTAGATGGTGAAATGAGCTCC AGTCTCGTGGGTTTTTATTGCTCATACATACTCGGCACGACGCAGAAAAA ATGCTGTGTTTTTTGCCCCCCCCTCTAAACAGCCTGGTCCGGTAAGAACC CGGCGTGCTCCGTCCCGGCTTTGTGGGGATGCGAGGTCAGGCTTTGTGGG GATGCGAGGTCAATGGTCTATAACGACTACGGCGTGCACGACTATGAGAA CACCCTCTAAACAGTTTTTTTTCATAACAAAAAGGACCCCTACCGGGCCA CTCTCTTCAAAAAACAATTAAAACTGTACATCAACTGGTGCTGGAAAAAA TTGCTGACGTGACTTCAGTATAAAAAGTGTCCCCACCTTGGACACTTTTC ATACTGAACCTTTGCCTGGAAAGGAGCTCAGATTCTTTGTAGGGACTGCT GTAGCCCCTCGACCAATGGCTGACAAACATTATTGGGACATTTTTGTTTT GCGGAGGGTTAATCCGTAGCCACCATTGTACTGCTTAAATAACACAGCTT GGATTTGAGCCCGTTTCCTGAACACCACTCTTCCCACACAGCAGAAGCTA ATTTCATAGGTATTCTTACACCAACAGCTGCGGATGGAAACTCTGCCTGA CTGATCAGAAGAAAAACAACACAGCCTGATGGGAACAATACTGCTGTACT GCTATGAAATGTAACCTAATTGTAGGTGGACCGCCCACCCATGATTTTAA GAGTATCTAGAAAAAGAATATGGAGGGAGCACGCAGACCCTATCACTAAC CCTAACCCTAACCCCAAAGCAAGAATTGAATACTTTATCCCATATGTTTG CTTCATCAATTTTGCTGCGTAGACTCCCTGCCGCACTTTGCAGCGCACAT GAAGACCATGACGACACAAAGAGCTCCATGAAAGTACCCGAACATCCAGT GGTGTTCTCTTCAATCGAACCCCCGACGGACGAAAAGCCGCACATTATGA ACACATGCAAAACCGTAGATACCATGCCCTGTGGGTTGCGGGCAACCGTT GCTGGAGTGTCTCCGATCACACACCAGCCCCGCCAGACTTCACGACCCAC CAATGCAGGGTCTGGACGTCAGAACGACGAGATGCACCGTGTCTGCGACC CAGCTAGCTGTCTGTGCCCCCCACCCGGTCCCGGCCTAAGAACTCTCTCC TACCATTGTGCTACGTTGTATGAAGTCGTGTACGTCTGTTTTGCTCTCCT TCATCTACGCTACCTTTGCCTTACAAACATGGCGTTGTTCATGACGCACT TCTTGCTCGGCGATATCCTCGAGTAAACAACAATGATAGTGTTGTGCTAC CCCAGAGCACCATGGCGGATGCACTACTGTTGCCCCCGAGGAGTCGCCCG TTTCTGCTTGCTCAGACTGACCGAGCTCGTTTTTCGATTCATCTGAGACT AAACACCCAAGATATATCCGACACATCAGATATCTGCCTCATTTTTTTCT CAGGGTTAGGTTCATGGCTCGCTGTTTTTGTTTCATACCTTCAGTATGTG CCGAGCAAGCACAACAAGGCGCTGACGCAGTGTTTAACACGATATATTGT ATTTCATGTCCTCCATCATGAGCATCTTCATATGGCAGCGTAGGCAAGGC ATCCGCTCTAAAACGGCCTTAACTTCATTGGCTACGGTTTGAGAGGGTTT CTCTCTAAAACCGACATGAGAGAACACCGGATTTATGAGAGAAATTGTAG CCACCACGTATCCCCGTTTTATGTTGAGGTCAATGATAAAAACCAACATA TGCTATGTGAGAAGGTCTTGTTCATGGATTAAAGCGTTTCACTGGGCGCG TTGCGCTGTGTGTGATCATGACGGACGTCCTGCCTGCTAAGGGTGTTTGT ACAACCTTGCGCCGTTGGCCTCTATGCCGATCGTGGCCCTAATAGCCTCT CTGATTTGCGTTGTATGTCCGCTGACATCTAGCCCCCCCCGATTGGGTCA GCCGTTACGCAAAACAAGCTTTCACGTATGTGGGGAGCACAAGTATTGGC TAAAATGTTCATGTAAATTCGCGGTCTCTCGCTTGACAGACTTACAAGGA GCTCATGACGTTCATCCGGTTATGCAACGATGCCGTGATGGGCGTGCGAG CTTCCTCCCTGCAGCTGAACACTCCGGATACGGCGATGGATACCGTTAGT CGAATCGTGGGGATGCTGAGACAGATGGGGAGTTGGGTCGACGATATCCC TCCAATTGATGAACCGATGAGATTCGGTAACAAAGCGTTCAGGTGGGTTC AGTTGTCCGCCTCCTTCTCAAGGAGATCGTTTTCGACTTTATCACACAGT TGGCATTGCTATTTGTCTAGGAACAGTGATTACGATAAGACACGGGCCCC TGATGCTTGCTGAACGCAAAGTGGGACAAGGATAATCAACTTAGGCTTTG AGTTATTGCGCGGTATTTGTGTTTGTAGGTCGTGGTACCAAAGGCTTGAG CAAGAGGCCGGCGGAATGGTGGATACTCTTCTGGAAGGGACTGGAAATGA GGTGAGTGGCTCGACCTAGTCACAACTGTTTGCGCGATGTTGTGCATCGC ACAGACAATTCTGCGGTGAATTCGAAGTTGCCTTCATGCTTTCCATGACG CGAGACTTCCCCAAAAATGTAACCCTAGCCCCAAGTTGCCTTGATACTTT TCATGACCCGAGACTATCTGCGCGAAGGTATTGTAACCCAACCCTACATG GTTATTTCATGTCGGATGCTGCTTGTGTACGGCAGCAGTATTGTGGTCAT GAGGTATTGATGACCCGTGTGCTTTTCACAGGCGGCCGCCGTGGAGTTGG TACCGTACTTGCTGGTGTCATTTGGGCATCCGAGCAGGATCGACTACGGA ACTGGGCACGAGACGTCCTTTGTGGTCTGGCTATGTGAGTTGCCGCCTTG TGGACGACTAGTTTCCCCACTCAAATCTCTTTTCTTTTATTGCAATTTCG GTCAGGTTGTCGCTCCACTGTTTGATTCATTACTGAAGATCTTCCTTCAT GGCGACCCCGCGAGTTGAGGCGTCTTGGGCGGCGGCCTTCTGCAAAGCAA AGACCGAGTGCAACCAGTTTTGCAGACAATTCAAAAGTGATGGTATTTTC CTGGGTGCAGTCGTAAGGCTGCCGTAGTGCCGGTATGTGCCCAACCAGCA ACCCAGCACTACCCTAATGATAACTCGATTTCGAGCGATTTCACCGGTTC TATACCGGGCAGAGGCCTGCTTCAACCGGCACTGCGTTAGGCCCACAACT GCTTGTTGCTTTTCCCAGGTTGCCTGTTCAAGCTCGGCTCTCTCACGAAA GAGGACTTGGCGCCCGCCATTCTGCAGGTTTTCTACAGGTGCGAAGATTT AGTAGGGTCCGCATCGCTTCTCAAACTTGATTCTGAATGAACTCATTATA TTTGGCTGTGAGTCCGTTGCGTGTAGGCAGACAGACGCCTGCACGCAGGT AGAGAGACGGAGAAGCAAACGAAAAGAGACGTACGTAACCACCCGGGCCC ACTGGTACGCGTTCAACGGGCAAGGTAAACATGAGCATATTGCGCAACCA AGGCGGTCTCGCCTTACACTGCTTCTGCTCTCTCTCTCTCTCTTATGGGT CTGTCTCTCTCTCGCCCTCTTCCACTGCTGTCTCGCTAGCTCTCTCTGTT TCTCTCTCCTCTCTCTCACTCTCTCTTGTCTGTTGGTCTGGTGTGTTGAC CGGACAAAACAAAAGAACAGCCAGGCCCTTTTTGCTCATTGTGTGCGCAT AGCTTGTACCCACCCCGCGGTGGGTTCGAAATCACGCCTGAGCCCGTGTT TGTCTCACCAGAAATATGAACCTGGCCACCCCCGTGATGAAATTTATTGC AATTTGCCGATGTCCCCAAACCTGAACTTCAGGGAATAATCAAAACAAAC ACAATAACACCCTCCCACGATCGCCCTCACTTCTTATTACATGAATGTCA TCGACCGTCGTTCATTGTACAAAACGCGTTGTGAACTCCGTCTGCGCTGC TCCTCGCCTTCGTCAGCTACTTGCAGGTGATGCGCAGATTGCAAAGCGTG TACATGCTCGAGCCTGCTGGCTCGCATGGAGTGTGGGGATTAGACGACTA TCACTGCCTTCCTTTTTTGTGGGGGAGCGCTCAGCTTATCGATCATCCAT CCATCAAACCGCACGATGTGCTCGATGACAACGTGTTGGACGAAGGTATT CCTGGTTGGGGTTGGCGTACATCAAACCTAGAGCCGGACCGATTCTGCTG TCTCTGCCGTTGTGGCTTCAGCCTGCTTGCCGAAACACCAACTTTTCCAC CTGCTGATGACCGTATGACATTGCTTGACCGCTTATTGACCTGTCCTAAT ACCAGGTAAACACGACTACCTCTACCTAGGTGCGATTGATTTTATCAAGA GCCTCAAAAAGGGCGCTGCTTTCGGAGAGTGCTGTCCAATGTTGAATGAC ATTTCGCAGCTACCTTCTTGGAAAAAGGTCAACACGGGCATGCAACGTCT CTACGAAGGTGAAGCACAATGCTGCTGTCGAGCAGCTGTAACAGATGATG GATGCACTTATTGTTGTGTGAAACGTGAAACGTACACTCCACGGCACCTT TGGCAATTTCGTGCTTCTCTACACTTGGCCATCGTATGCGACAGGGGATG TTTTGGGCAAGATGCCCGTTATCCAGCACTTCTTGTTTGGATCTTTATTG CCATGCACATGGGAGCCAAGTCCGGCTCCAGCCGTCAATCCTGTCGCCGT CAGCTCTTTCGGAGGTCGAGCACCTTGGGCGAAAGGAGCTCCGGCACCCC CAGATGTGAGAGAAGTCACAGGTGTTGGTCCCCATTAGAGCATCGAAACT GTAACGTATGCTGCTTGTATGCATGCGGACATCCTAAAGCCTGGAATTAC ACCCGGAAGCAGTCTTGCGCGACGGATTTTGAACTGTTTTTCTTTTGATA CACCTCTGGTTGTAGTGGTGACCCAAACCTGTATCTATCCCCTGTGCGTT GCGGGCACAAGAAGACGTGCACACCCGGTTAAACCCTATTTCTCAGGCCC GCGGCGTCTAGCACCGTTGCATGCTCTCATGGCTTGGGTTTTCATGATGT TTTGGGAGATATGTTCATGATCGTTCTGGAGGCCCCCATTTAGGCGCTGC TTACTACTGCTATTGCTGGGGTTCATTCAGACTTGATCTGGATCACTTTC GCCGACGGCCGCTACGATCGCCGTACTTGTGGCGATCCGAATTGTGCATA AACTTGTCATGCATTCCTTCGTGGTGCACTTTTGTTTCATTTCCTATGAT ACTGGAAGGCATCACGTGTTGAGCGAAATTCATCCGGAGCGGACCTGAAC GGGGGACTAAAAGATGACCCGACAACGTCGGTCTTGTCTAACACTCGCGA ATTTGTGATCCATGATTGGCAGGTGCACACTCTGGGAGCGGCGAAGGCGA CGTCAGCAAACACCCAACCTACACATCAACATACGTCAACATAACTATGC AGAATGTAGCTCGGCACAGAGCAACGTGGTGGTACTACAGTAGGGTCGAG ACGAACTGTTGCAGGCGTATTGCTTTTGTTGAAGCAGCAGTGTCTTCGGT GGGCTCCGGCTGCGTCTTTCGGTGGTGAATGATGCGTCTTGTACGTTGCT TGTTTAGACTACTAGATAATCCCTCTGTTTTGCCGTGAATAGGTGCATCG TGCTCCATTTGGCGTCGAATTGCGCCTTATCTTCAACTGCACTGATTACA GGGCACAATCGCTGTCTCCTCCAAGTCCAACGCAACCGCGACAGGTTCTC GTTGCATTGTGCAAAACCGAGACTCGAAAAACAGGCAGAAAAGATCTTGA GACTGGTCGGATATATTTCCAACTGTGTGCAAGGATTTTTCACGAAAACG GTGCCCACCGGAATGCTGCGAATGTCCGGATGGATCTCTCTTGTGCATGT CTACTAATATCTACTTGTTCATCTATGCCTGTCGCCAGTCTCAACCCGTT CGGTACATGTTGACGCACCCGCAGGGGTCACACGGGAGTTTGTTTTTCTT CCGCCCTTCCGGTGGTTGTTGTTGTGTCCTTGAGAAGGGTTCAGCGGCCC CATCCCTCTTGATTGCACTTTCTCGCTGCGCGTTCCACTGATGCTGAATG GGGAGTTGGTAGTCGCGCCGGAGAGATTCAATACCTGGTCTGTGTTGTAG CTCCAGCCCCTGCGCGAGATAAAGCAGCAAAGGGTGGATGTGACTCATGC CCACTGGTACAACCCAAGCTTTGAAGGTTTGTGGGATTGGCGAGAAACCT AACCGTCGGATCATACTTGGAAACGGCGATAATTTTGCCGGTGGAAACAC GCTCCCATTCTCC
back to top

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig10:302115..310377-

>mRNA_Ecto-sp6_S_contig10.447.1 ID=mRNA_Ecto-sp6_S_contig10.447.1|Name=mRNA_Ecto-sp6_S_contig10.447.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1083bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:302115..310377- (Ectocarpus species6 EcLAC_371)
ATGACTTTTCGAGTCCCAGTTCGAGCTATAAGGACGGTGGCAGACTTGAA
CCACTTCAAACAATCGCCGACTTACAAGGAGCTCATGACGTTCATCCGGT
TATGCAACGATGCCGTGATGGGCGTGCGAGCTTCCTCCCTGCAGCTGAAC
ACTCCGGATACGGCGATGGATACCGTTAGTCGAATCGTGGGGATGCTGAG
ACAGATGGGGAGTTGGGTCGACGATATCCCTCCAATTGATGAACCGATGA
GATTCGGTAACAAAGCGTTCAGGTCGTGGTACCAAAGGCTTGAGCAAGAG
GCCGGCGGAATGGTGGATACTCTTCTGGAAGGGACTGGAAATGAGGCGGC
CGCCGTGGAGTTGGTACCGTACTTGCTGGTGTCATTTGGGCATCCGAGCA
GGATCGACTACGGAACTGGGCACGAGACGTCCTTTGTGGTCTGGCTATGT
TGCCTGTTCAAGCTCGGCTCTCTCACGAAAGAGGACTTGGCGCCCGCCAT
TCTGCAGGTTTTCTACAGCTACTTGCAGGTGATGCGCAGATTGCAAAGCG
TGTACATGCTCGAGCCTGCTGGCTCGCATGGAGTGTGGGGATTAGACGAC
TATCACTGCCTTCCTTTTTTGTGGGGGAGCGCTCAGCTTATCGATCATCC
ATCCATCAAACCGCACGATGTGCTCGATGACAACGTGTTGGACGAAGGTA
AACACGACTACCTCTACCTAGGTGCGATTGATTTTATCAAGAGCCTCAAA
AAGGGCGCTGCTTTCGGAGAGTGCTGTCCAATGTTGAATGACATTTCGCA
GCTACCTTCTTGGAAAAAGGTCAACACGGGCATGCAACGTCTCTACGAAG
GGGATGTTTTGGGCAAGATGCCCGTTATCCAGCACTTCTTGTTTGGATCT
TTATTGCCATGCACATGGGAGCCAAGTCCGGCTCCAGCCGTCAATCCTGT
CGCCGTCAGCTCTTTCGGAGGTCGAGCACCTTGGGCGAAAGGAGCTCCGG
CACCCCCAGATGTGCACACTCTGGGAGCGGCGAAGGCGACGTCAGCAAAC
ACCCAACCTACACATCAACATACGTCAACATAA
back to top