mRNA_Ecto-sp6_S_contig10.437.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig10.437.1
Unique NamemRNA_Ecto-sp6_S_contig10.437.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.437.1 vs. uniprot
Match: D7G919_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G919_ECTSI)

HSP 1 Score: 1546 bits (4004), Expect = 0.000e+0
Identity = 826/838 (98.57%), Postives = 828/838 (98.81%), Query Frame = 1
Query:  211 MTGSLAAKKRKSQESRHKRDDFLNQMTNFLEGIESKTTADVIPPEPPVSLARAESYTSTAFPPAATESVSGKQVLWANAVQDRRASSGAASASSSLMQEDLFEDPFVRKELPLETAKAHGGLRSAMIGAENTVSHPRGSLFDDDDVGLADTGPEEEEDEVQSGRQGSVLTSDPVDSPLQRVTSSPLPFSAPTHDTRASLAQGRSRSKSKPSRGLDLEEVRRRTSLLSGGSRAPXXXXXXXXXXXXXXXXXXXXXXSYFDGGWGPQQPAAPSGEVPPHPLHAAPSDPLFSGGNYFNEDLLRARGERSSRTGLDEGHTSGRGVGRGGWASGDALKDSAGSFLNTARDGAKTLLQDAKAGVDAVGASWQSSRDENGQQRVAGRPPRGSRQEEVEGEREFEVTFGEGRFGFTLFREDAGPRKGQGVVCKVHTGSTAHSLGVSEGDTVTGVNKQRYETYDDVMAVLPKLPRPVLITFSRGGTGYSAEGRSMAARRASTISEDVQGGGNPLEWLAKLNPFDKGRRDEEDDLRGERKSQVDSKVLASREHGSTGEVFARGVRGGVFSWSYYGTSDGIESNTRDAYTEHVMRCQWGKSVHTMHEMSWMVARRYREFDALDLDLRDAYPDRKDALPRLPPKEFFKMAPDVVERRAKGLELYMTTLIRRFPDMLASSHLDRFLTISERLSTLQTPAAVGSSSPRLSYRNLGANGSSSNVFPAHSPESRSSSLVGTDYILNLMSSEEAWRLSQARRSSPVDVAFAEDLVRELEDHISRIPPDEHLLSDEKLYGLVARCQKAWPGLKSAAAAASGASSPTLLPRIVQCDEGMECAFENLRALLTSRGYIG 2724
            MTGSLAAKKRKSQESRHKRDDFLNQMTNFLEGIESKTTADVIPPEPPVSLARAESYTSTAFPPAATESVSGKQVLWANAVQDRRASSGAASASSSLMQEDLFEDPFVRKELP ETAKAHGGLRSAMI AENTVSHPRGSLFDDDDVGLADTGPEEEEDEVQSGR GSVLTSDPVDSPLQRVTSSPLPFSAPTHDTRASLAQGRSRSKSKPSRGLDLEEVRRRTSLLSGGSRAPXXXXXXXXXXXXXXXXXXXXXXSYFDGGWGPQQPAAPSGEVPPHPLHAAPSDPLFSGGNYFNEDLLRARGERSSRTGLDEGHTSGRGVGRGGWASGDALKDSAGSFLNTARDGAKTLLQDAKAGVDAVGASWQSSRDENGQQRVAGRPPRGSRQEEVEGEREFEVTFGEGRFGFTLFREDAGP+KGQGVVCKVHTGSTAHSLGVSEGDTVTGVNKQRYETYDDVMAVLPKLPRPVLITFSRGGTGYSAEGRSMAARRASTISEDVQGGGNPLEWLAKLNPFDKGRRDEED+LR   KSQVDSKVLASREHG TGEVFARGVRGGVFSWSYYGTSDGIESNTRDAYTEHVMRCQWGKSVHTMHEMSWMVARRYREFDALDLDLRDAYPDRKDALPRLPPKEFFKMAPDVVERRAKGLELYMTTLIRRFPDMLASSHLDRFLTISERLSTLQTPAAVGSSSPRLSYRNLGANGSSSNVFPAHSPESRSSSLVGTDYILNLMSSEEAWRLSQARRSSPVDVAFAEDLV ELEDHISRIPPD HLLSDEKLYGLVARCQKAWPGLKSAAAAASGASSPTLLPRIVQCDEGMECAF NLRALLTSRGYIG
Sbjct:    1 MTGSLAAKKRKSQESRHKRDDFLNQMTNFLEGIESKTTADVIPPEPPVSLARAESYTSTAFPPAATESVSGKQVLWANAVQDRRASSGAASASSSLMQEDLFEDPFVRKELPPETAKAHGGLRSAMISAENTVSHPRGSLFDDDDVGLADTGPEEEEDEVQSGRHGSVLTSDPVDSPLQRVTSSPLPFSAPTHDTRASLAQGRSRSKSKPSRGLDLEEVRRRTSLLSGGSRAPXXXXXXXXXXXXXXXXXXXXXXSYFDGGWGPQQPAAPSGEVPPHPLHAAPSDPLFSGGNYFNEDLLRARGERSSRTGLDEGHTSGRGVGRGGWASGDALKDSAGSFLNTARDGAKTLLQDAKAGVDAVGASWQSSRDENGQQRVAGRPPRGSRQEEVEGEREFEVTFGEGRFGFTLFREDAGPKKGQGVVCKVHTGSTAHSLGVSEGDTVTGVNKQRYETYDDVMAVLPKLPRPVLITFSRGGTGYSAEGRSMAARRASTISEDVQGGGNPLEWLAKLNPFDKGRRDEEDELRASGKSQVDSKVLASREHGPTGEVFARGVRGGVFSWSYYGTSDGIESNTRDAYTEHVMRCQWGKSVHTMHEMSWMVARRYREFDALDLDLRDAYPDRKDALPRLPPKEFFKMAPDVVERRAKGLELYMTTLIRRFPDMLASSHLDRFLTISERLSTLQTPAAVGSSSPRLSYRNLGANGSSSNVFPAHSPESRSSSLVGTDYILNLMSSEEAWRLSQARRSSPVDVAFAEDLVHELEDHISRIPPDAHLLSDEKLYGLVARCQKAWPGLKSAAAAASGASSPTLLPRIVQCDEGMECAFGNLRALLTSRGYIG 838          
BLAST of mRNA_Ecto-sp6_S_contig10.437.1 vs. uniprot
Match: A0A835YRV1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRV1_9STRA)

HSP 1 Score: 310 bits (793), Expect = 1.240e-88
Identity = 250/675 (37.04%), Postives = 334/675 (49.48%), Query Frame = 1
Query:  781 PTHDTRASLAQGRSRSKSKPSRGLDLEEVRRRTSLLSGGSRAPXXXXXXXXXXXXXXXXXXXXXXSYFDGGWGPQQPAAPSGEVPPHPLHAAP---SDPLFSG-----GNYFNEDLLRARGERSSRTGLDEGHTSGRGVGRGGWASGDALKDSAGSFLNTARDGAKTLLQDAKAGVDAVGASWQSSRDENGQQRVAGRPPRGSRQEEVEGEREFEVTFGEGRFGFTLFREDAGPRKGQGVVCKVHTGSTAHSLGVSEGDTVTGVNKQRYETYDDVMAVLPKLPRPVLITFSR-GGTGYSAEGRSMAARRASTISEDVQGGGNPLEWLAKLNPFDKGRRDEEDDLRGERKS-QVDSKVLASREHGSTGEVFARGVRGGVFSWSYYGTSDGIES-----NTRDAYTEHVMRCQWGKSVHTMHEMSWMVARRYREFDALDLDLRDAYPDRKDALPRLPPKEFFKMAPDVVERRAKGLELYMTTLIRRFPDMLASSHLDRFLTISERLSTLQTPAAV--GSSS-------------PRLSYRNLGANGSSSNVFPAHSPESR----SSSLVGTDYILNLMSSEEAWRLSQARRSSPVDVAFA-----EDLVRELEDHISR----IPPDEHLLSDEKLYGLVARCQKAWPGLKSAAAAASGA-SSPTLLPRIVQCDEGME 2673
            P    R + A   +  K K    +DLEE RRRT+LL G                           S   G  G    AAP    PP PL   P   +DPL +G     G+YFNEDLLR R  R++  G    + +        W +G A+   AGS ++ A+ GAK+LLQ A    +A                       GS          ++VTFG+GR GFT+ + +    +G GVVCKV   STA S GVS GDTV  +N++R  +YD+VM+VLP +PRPVL+TF++  G    A G++ A         D QG      WL  L+PF  G+R     L G+  S +V+++ L  R     G V       GVFSWS YGTSDG E+     +T D YTE+VMRCQWG  +   H   WMVARRYREFDALD DLR+ +P  KD+ P LPPKE FK + +VV RR  GLE YMT LI   PD+L    ++RFL I ER++ ++    +  GSS              P LS         +  +  A    SR     ++LVGTDY+LNLM++ EA+ L +AR  +   +  A     E+ VR L   +      +      L D +L+GL   CQ++WP LK+ AA A        +LP ++QCDE +E
Sbjct:  189 PARPARVASAAPAAAGKPKSRGSIDLEEARRRTALLMGDGA----------------YSRRSSSGSVGAGMAGAAAEAAPVRREPP-PLATRPQMPADPLGAGSSDAGGSYFNEDLLRQRQARAATYGSTYPYDANEQDASSAWDTG-AILGRAGSMVSAAKSGAKSLLQRANGYGNAXXXXXXXXXX-------------GS----------YDVTFGDGRLGFTMLKSE----QGLGVVCKVQPDSTAASAGVSPGDTVVAINRRRMSSYDEVMSVLPSMPRPVLVTFAKPDGEPQLANGQA-ALTGGGAWEADGQGSKG---WLGNLDPFKSGKRRSSAGLSGDNASWRVENQDLQFRRPDFHGVVVH--AHNGVFSWSLYGTSDGSEAPGARLSTGDTYTEYVMRCQWGPDL--QHMSPWMVARRYREFDALDKDLREVFPHLKDSFPSLPPKELFKTSQEVVSRRRVGLEQYMTFLIGNCPDVLCCPQMNRFLGIDERIAAIKGQGGLRRGSSGAPAXXXXXXXXXVPSLSASTSSGPLQARLLLCATEASSRITVGCAALVGTDYLLNLMTAGEAYDLMRARAGALRPLTRAGLQAVEEAVRRLRQRVDDWGRGVAVVADPLHDAELHGLAEICQQSWPALKATAARADDTPEGMDMLPSVLQCDEDIE 810          
BLAST of mRNA_Ecto-sp6_S_contig10.437.1 vs. uniprot
Match: A0A7S1U6D7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U6D7_9STRA)

HSP 1 Score: 132 bits (333), Expect = 5.830e-30
Identity = 97/285 (34.04%), Postives = 143/285 (50.18%), Query Frame = 1
Query: 1879 GVFSWSYYGTSDGIESNTRDAYTEHVMRCQWGKSVHTMHEMSWMVARRYREFDALDLDLRDAYPDRKDALPRLPPKEFFK-MAPDVVERRAKGLELYMTTLIRRFPDMLASSHLDRFLTISERLSTL-------QTPAAVGSSSPRLSYRNLGANGSSSNVFPAHSPESRSSSLVGTDYILNLMSSEEAWRLSQARRSSPVD---VAFAEDLVRELEDHISRIPPDEHLLSDEKLYGLVARCQKAWPGLKSAAAAASGASSPTLLPRIVQCDEGMECAFENLRAL 2700
            GVFS+  Y TS     +T   YTE+VM+C +G     +   SW+VARRY EF A+D  LR+ YP      P LP KE++  M+ + V+RR  GL  YM  LIR FP +L S  ++ FL ++ER S +          AA  SSS R S  N  A+                + L      L L++SE+       +   P+D   +  AE  V++L+ H++ +   E ++ D+ L  L+    + WP L++  A A+ A  P L PR +QCDE +     +LR+L
Sbjct:   66 GVFSFQMYSTSTASNPDTGSPYTEYVMQCAYGPGFDNLR--SWLVARRYSEFYAMDTALRETYPALAPRFPNLPAKEYYNSMSAETVQRRRSGLNGYMKMLIREFPTVLKSRTMNEFLQVAERASDVLRTADIFMAEAAERSSSIRRSNSN--ASQPRERRLRRSPSNDAENDLTDPTEALPLITSEQVDLYVAEQAPGPMDWESLTAAEREVQKLQAHVAHLSAKERIVEDQVLLELLQATLRFWPRLRATGALAADAD-PLLTPRALQCDEELGRVVADLRSL 345          
BLAST of mRNA_Ecto-sp6_S_contig10.437.1 vs. uniprot
Match: A0A7S3K4V4_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4V4_9STRA)

HSP 1 Score: 121 bits (304), Expect = 1.370e-24
Identity = 74/162 (45.68%), Postives = 95/162 (58.64%), Query Frame = 1
Query: 1822 LASREHGSTGEVFARGVRGGVFSWSYYGTSDGIESNTRDAYTEHVMRCQWGKSVHTMHEMSWMVARRYREFDALDLDLRDAYPDRKDALPRLPPK-EFFKMAPDVVERRAKGLELYMTTLIRRFPDMLASSHLDRFLTISERLSTLQTPAAVGSSSPRLSYR 2304
            LA   H   G+  A    GGVFS S YGT++  +  T + YTE+++RCQ+GK+  TM    WMVARR+REF A+D +LR A PD    LP LP    FF M+P VVE+R  GLE Y+ TLI  FP  L S  LD FL I  R++    P +  S++   S R
Sbjct:  601 LALHRH-ELGKAAATYAFGGVFSCSMYGTAEAKDFETGEPYTEYIIRCQFGKTFETMKP--WMVARRFREFVAVDANLRAALPDLAPHLPPLPSSFVFFAMSPQVVEQRQHGLEQYLKTLITEFPATLKSPQLDEFLCIHSRIAASTAPRSSTSNASATSSR 759          
BLAST of mRNA_Ecto-sp6_S_contig10.437.1 vs. uniprot
Match: A0A7S2BPG0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BPG0_9STRA)

HSP 1 Score: 113 bits (283), Expect = 3.860e-24
Identity = 90/285 (31.58%), Postives = 134/285 (47.02%), Query Frame = 1
Query: 1876 GGVFSWSYYGTSDGIESNTRDAYTEHVMRCQWGKSVHTMHEMSWMVARRYREFDALDLDLRDAYPDRKDALPRLPPKEFF-KMAPDVVERRAKGLELYMTTLI--RRFPDMLASSHLDRFLTISERLSTLQTPAAVGSSSPRLSYRNLGANGSSSNVFPAHSPESRSSSLVGTDYILNLMSSEEAWRLSQARRSSP-----VDVAFAEDLVRELEDHISRIPPDEHLLSDEKLYGLVARCQKAWPGLKSAAAAASGASSPTLLPRIVQCDEGMECAFENLRALLT 2706
            GG+F  + YGT+D ++  T   YTE+V+RCQWG+S  +M    W+VARRYREF ALD  L+ A+PD  + LP LP K  F  ++ D V  R + LE Y+T L+   +    + S+ +D FL IS+R+  +Q     G S P +                    +      +    I+ L+S+ +A    +A   S       ++A  E  V  L +    + P   +    K   L + CQK WP LK+        SS  L+PR +Q DE +      L  + T
Sbjct:   12 GGIFGCTMYGTADALDMETGQTYTEYVLRCQWGESFPSMKP--WIVARRYREFCALDSSLKYAFPDLAEYLPGLPRKHIFGTLSSDTVNVRQRQLEDYLTRLMTDEKLAVTMKSAQIDEFLMISQRIKLIQE---TGQSVPNMQ-------------------DDTDIISIPPGKIIQLLSAADAQEAFEANNYSERPLTSAELALLEADVLTLSNLTENLDPKVPISRGTKK--LASLCQKEWPKLKATGCVDGHNSS--LVPRALQLDEDLTRIASTLSTIAT 268          
BLAST of mRNA_Ecto-sp6_S_contig10.437.1 vs. uniprot
Match: A0A1W0A1M2_9STRA (PX domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A1M2_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 6.240e-13
Identity = 40/115 (34.78%), Postives = 68/115 (59.13%), Query Frame = 1
Query: 1900 YGTSDGIESNTRDAYTEHVMRCQWGKSVHTMHEMSWMVARRYREFDALDLDLRDAYPDRKDALPRLPPKEFF--KMAPDVVERRAKGLELYMTTLIRRFPDMLASSHLDRFLTIS 2238
            +G+ + ++ ++   YTE+++RC     + +    +W  ARRYREF A+D+ LR+ YP     LP LP K++    +A D VE+R + L  Y+TTL+  +P++     +D FL +S
Sbjct:   12 FGSYEALDQDSGKFYTEYILRCTQQDGLRSQ---TWKTARRYREFCAIDVLLREKYPHLSATLPPLPSKKYLGSSLASDFVEKRQRELGQYITTLLLLYPELAKDEIVDEFLELS 123          
BLAST of mRNA_Ecto-sp6_S_contig10.437.1 vs. uniprot
Match: A0A067CTP4_SAPPC (PX domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CTP4_SAPPC)

HSP 1 Score: 74.3 bits (181), Expect = 4.350e-12
Identity = 44/131 (33.59%), Postives = 72/131 (54.96%), Query Frame = 1
Query: 1852 EVFARGVRGGVFSWSYYGTSDGIESNTRDAYTEHVMRCQWGKSVHTMHEMSWMVARRYREFDALDLDLRDAYPDRKDALPRLPPKEFF--KMAPDVVERRAKGLELYMTTLIRRFPDMLASSHLDRFLTIS 2238
            EV    V+  VF     G+ + ++ ++   YTE+++RC        +   SW  ARRYREF A+D+ LR+ YP    + P LP K++    ++ D VE+R + L  Y++TL+  +P +L    +D FL +S
Sbjct:    3 EVMHEAVKVDVF-----GSYEALDQDSGKFYTEYILRCNVQDPSARLR--SWNAARRYREFCAIDILLREKYPHLASSFPSLPSKKYLGSSLSSDFVEKRQRDLGHYISTLLSLYPQLLHDEIMDEFLELS 126          
BLAST of mRNA_Ecto-sp6_S_contig10.437.1 vs. uniprot
Match: A0A1V9Z4F0_9STRA (PX domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z4F0_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.160e-11
Identity = 38/116 (32.76%), Postives = 70/116 (60.34%), Query Frame = 1
Query: 1900 YGTSDGIESNTRDAYTEHVMRCQWGKSVHTMHEM-SWMVARRYREFDALDLDLRDAYPDRKDALPRLPPKEFF--KMAPDVVERRAKGLELYMTTLIRRFPDMLASSHLDRFLTIS 2238
            +G+ + ++ ++   YTE+++RC    +V     + +W  ARRYREF A+D+ LR+ YP    + P LP K++    ++ D VE+R + L+ Y+++L+  +P +L    +D FL +S
Sbjct:   17 FGSYEALDQDSGKFYTEYILRC----NVQDPGRLRTWNTARRYREFCAIDILLREKYPHLASSFPSLPSKKYLGSSLSSDFVEKRQRDLDQYISSLLNLYPQLLQDELVDEFLELS 128          
BLAST of mRNA_Ecto-sp6_S_contig10.437.1 vs. uniprot
Match: A0A3R8CJ93_9STRA (PX domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3R8CJ93_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 2.840e-11
Identity = 40/128 (31.25%), Postives = 68/128 (53.12%), Query Frame = 1
Query: 1879 GVFSWSYYGTSDGIESNTRDAYTEHVMRCQWGKSVHTMH---EMSWMVARRYREFDALDLDLRDAYPDRKDALPRLPPKEFF--KMAPDVVERRAKGLELYMTTLIRRFPDMLASSHLDRFLTISERL 2247
            G F     G+ + ++ +    YTE+++RC W K   T     ++ W V RRYREF A+D+ LR+ YP R    P LP K++    ++ D V++R + L  Y+ +++   P ++    +D FL I   +
Sbjct:   18 GDFRVEVLGSQESLDLDCGKFYTEYILRCSWIKCNGTPEVKLQLIWDVVRRYREFCAIDILLREKYPSRAPMFPYLPSKKYIGSSLSADFVDKRQRDLGYYIMSILHSCPLLVQDEIIDSFLDIKRHI 145          
BLAST of mRNA_Ecto-sp6_S_contig10.437.1 vs. uniprot
Match: A0A225X2H2_9STRA (PX domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X2H2_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 5.020e-11
Identity = 40/125 (32.00%), Postives = 66/125 (52.80%), Query Frame = 1
Query: 1879 GVFSWSYYGTSDGIESNTRDAYTEHVMRCQWGKSVHTMHEMSWMVARRYREFDALDLDLRDAYPDRKDALPRLPPKEFF--KMAPDVVERRAKGLELYMTTLIRRFPDMLASSHLDRFLTISERL 2247
            G F     G+ + ++ +    YTE+++RC W +   T     W V RRYREF A+D+ LR+ YP R    P LP K++    ++ D V++R + L  YM +++   P ++    +D FL I   +
Sbjct:   20 GDFRVEVMGSQESLDLDCGKFYTEYILRCSWIERNATPE--IWDVVRRYREFCAIDILLREKYPSRASLFPYLPSKKYIGSSLSADFVDKRQRDLGYYMMSILHSCPLLVQDEIIDSFLDIKRHI 142          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.437.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G919_ECTSI0.000e+098.57Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YRV1_9STRA1.240e-8837.04Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1U6D7_9STRA5.830e-3034.04Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S3K4V4_9STRA1.370e-2445.68Hypothetical protein n=2 Tax=Aureoumbra lagunensis... [more]
A0A7S2BPG0_9STRA3.860e-2431.58Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A1W0A1M2_9STRA6.240e-1334.78PX domain-containing protein n=1 Tax=Thraustotheca... [more]
A0A067CTP4_SAPPC4.350e-1233.59PX domain-containing protein n=2 Tax=Saprolegnia T... [more]
A0A1V9Z4F0_9STRA1.160e-1132.76PX domain-containing protein n=1 Tax=Achlya hypogy... [more]
A0A3R8CJ93_9STRA2.840e-1131.25PX domain-containing protein n=2 Tax=Peronospora e... [more]
A0A225X2H2_9STRA5.020e-1132.00PX domain-containing protein n=1 Tax=Phytophthora ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:193227..203469 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1553.1
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7G919
Model size2727
Hectar predicted targeting categoryother localisation
Exons18
EggNOG free text desc.PhoX homologous domain, present in p47phox and p40phox.
EggNOG OGs2E72Z@1,2SDQN@2759
Ec32 ortholog descriptionPhox homologous domain
Ec32 orthologEc-15_002230.1
Cds size2727
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348696.3472192-CDS-Ecto-sp6_S_contig10:193226..1932621682348696.3472192-CDS-Ecto-sp6_S_contig10:193226..193262Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 193227..193262 +
1682348696.3556123-CDS-Ecto-sp6_S_contig10:193916..1940501682348696.3556123-CDS-Ecto-sp6_S_contig10:193916..194050Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 193917..194050 +
1682348696.362725-CDS-Ecto-sp6_S_contig10:195588..1956671682348696.362725-CDS-Ecto-sp6_S_contig10:195588..195667Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 195589..195667 +
1682348696.369813-CDS-Ecto-sp6_S_contig10:195935..1962031682348696.369813-CDS-Ecto-sp6_S_contig10:195935..196203Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 195936..196203 +
1682348696.3850958-CDS-Ecto-sp6_S_contig10:196646..1968821682348696.3850958-CDS-Ecto-sp6_S_contig10:196646..196882Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 196647..196882 +
1682348696.394896-CDS-Ecto-sp6_S_contig10:197052..1971121682348696.394896-CDS-Ecto-sp6_S_contig10:197052..197112Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 197053..197112 +
1682348696.4029682-CDS-Ecto-sp6_S_contig10:197388..1978161682348696.4029682-CDS-Ecto-sp6_S_contig10:197388..197816Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 197389..197816 +
1682348696.4108121-CDS-Ecto-sp6_S_contig10:198180..1983401682348696.4108121-CDS-Ecto-sp6_S_contig10:198180..198340Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 198181..198340 +
1682348696.4200764-CDS-Ecto-sp6_S_contig10:198731..1988891682348696.4200764-CDS-Ecto-sp6_S_contig10:198731..198889Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 198732..198889 +
1682348696.4286935-CDS-Ecto-sp6_S_contig10:199065..1992131682348696.4286935-CDS-Ecto-sp6_S_contig10:199065..199213Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 199066..199213 +
1682348696.4375858-CDS-Ecto-sp6_S_contig10:199483..1995711682348696.4375858-CDS-Ecto-sp6_S_contig10:199483..199571Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 199484..199571 +
1682348696.4463892-CDS-Ecto-sp6_S_contig10:199902..1999431682348696.4463892-CDS-Ecto-sp6_S_contig10:199902..199943Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 199903..199943 +
1682348696.455253-CDS-Ecto-sp6_S_contig10:200130..2003151682348696.455253-CDS-Ecto-sp6_S_contig10:200130..200315Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 200131..200315 +
1682348696.4646325-CDS-Ecto-sp6_S_contig10:200602..2006871682348696.4646325-CDS-Ecto-sp6_S_contig10:200602..200687Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 200603..200687 +
1682348696.476919-CDS-Ecto-sp6_S_contig10:201982..2020981682348696.476919-CDS-Ecto-sp6_S_contig10:201982..202098Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 201983..202098 +
1682348696.496064-CDS-Ecto-sp6_S_contig10:202396..2025741682348696.496064-CDS-Ecto-sp6_S_contig10:202396..202574Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 202397..202574 +
1682348696.5086384-CDS-Ecto-sp6_S_contig10:203007..2031301682348696.5086384-CDS-Ecto-sp6_S_contig10:203007..203130Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 203008..203130 +
1682348696.5158243-CDS-Ecto-sp6_S_contig10:203265..2034691682348696.5158243-CDS-Ecto-sp6_S_contig10:203265..203469Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 203266..203469 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.437.1prot_Ecto-sp6_S_contig10.437.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig10 193227..203469 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig10.437.1

>prot_Ecto-sp6_S_contig10.437.1 ID=prot_Ecto-sp6_S_contig10.437.1|Name=mRNA_Ecto-sp6_S_contig10.437.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=909bp
MDQEKDGHEGEKADVVGGASGPLAEVDPFADLLELSFPKPASNTAGAPRA
KPAASASLQAPSARGEVAPVMTGSLAAKKRKSQESRHKRDDFLNQMTNFL
EGIESKTTADVIPPEPPVSLARAESYTSTAFPPAATESVSGKQVLWANAV
QDRRASSGAASASSSLMQEDLFEDPFVRKELPLETAKAHGGLRSAMIGAE
NTVSHPRGSLFDDDDVGLADTGPEEEEDEVQSGRQGSVLTSDPVDSPLQR
VTSSPLPFSAPTHDTRASLAQGRSRSKSKPSRGLDLEEVRRRTSLLSGGS
RAPPPSVPAPARPAAASPRPPPAASSYFDGGWGPQQPAAPSGEVPPHPLH
AAPSDPLFSGGNYFNEDLLRARGERSSRTGLDEGHTSGRGVGRGGWASGD
ALKDSAGSFLNTARDGAKTLLQDAKAGVDAVGASWQSSRDENGQQRVAGR
PPRGSRQEEVEGEREFEVTFGEGRFGFTLFREDAGPRKGQGVVCKVHTGS
TAHSLGVSEGDTVTGVNKQRYETYDDVMAVLPKLPRPVLITFSRGGTGYS
AEGRSMAARRASTISEDVQGGGNPLEWLAKLNPFDKGRRDEEDDLRGERK
SQVDSKVLASREHGSTGEVFARGVRGGVFSWSYYGTSDGIESNTRDAYTE
HVMRCQWGKSVHTMHEMSWMVARRYREFDALDLDLRDAYPDRKDALPRLP
PKEFFKMAPDVVERRAKGLELYMTTLIRRFPDMLASSHLDRFLTISERLS
TLQTPAAVGSSSPRLSYRNLGANGSSSNVFPAHSPESRSSSLVGTDYILN
LMSSEEAWRLSQARRSSPVDVAFAEDLVRELEDHISRIPPDEHLLSDEKL
YGLVARCQKAWPGLKSAAAAASGASSPTLLPRIVQCDEGMECAFENLRAL
LTSRGYIG*
back to top

mRNA from alignment at Ecto-sp6_S_contig10:193227..203469+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig10.437.1 ID=mRNA_Ecto-sp6_S_contig10.437.1|Name=mRNA_Ecto-sp6_S_contig10.437.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=10243bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:193227..203469+ (Ectocarpus species6 EcLAC_371)
ATGGACCAAGAGAAGGATGGACATGAGGGGGAAAAGGTATGGCGATCCTG TGCCGTCTTGTGACAGACTTGTCGTTTGGAGATTGGAGATGACTTGGAGG TCGTCTACAGCAGTCTGCAGCAGTTTTCAGCAGCAGTAGTCCTACTCAGC AGGGCCGTGTATTGACAAGTATTGATGTTGTTGGGCGCTGTCAACCACCG TCCATCCGCCCATGCTGGGGAAACGAATACGCAGTTAATGTGTCTCCTAC CATACCTAACGGTAGCAGCATGGGCGTGCCTAAGTCATTAGAGTTAAAGC GTCTCCTTGAAGGTATGTGGGTGGGGGCGCGGTGTAGCGGAGAAATTGCC TCCCTCCAACACAGCGTGGAAAAAGAATAAAATAATTTCAACCCGAGGTC GTGCAACCTGCCGCAGTACTCACAGCAGCCGCCGTGCTCACGCCGCTCGG CTTTTCTTGTGTATGCGAGATGCCTGCAGATGGTTTTGCGGTGTGCGCTC TTTCAACATGATAAGCTTACAATCATGGATCCGTTGATTTTGACCTCTCT GCTGTACGTAGGTTGTGCCGCTTCTCGGCTATCTCGTTCACCAGTGCTCG CACACAGCGGCACATGTAGTTTACAGGTCAGATGTCTAGACGGACTGTTT TCCTCACGACTGCTGCCGATTGTTCATTAATCCAAAGCAGGCGGATGTGG TTGGAGGTGCATCAGGCCCCTTGGCGGAGGTAGATCCGTTCGCAGACCTG CTCGAGCTCTCCTTTCCGAAGCCAGCCTCCAACACCGCTGGGGCGCCGCG CGCCAAACCCGCAGCTAGTGCAAGGTACACGACCTTTTGCTCTTGTTTTG AACGGTAAACGCCAACCTACAGCTGTAGTTCTTGTGTTTTTTTTGCTGAA AAGACGTTGCCACAAAATTCAAACGCCTCGAATATAATCCACCCACGTGG AGGTTGTTGTTAGACGGATTTGTGAGCAGGTTCGCGATGCGGATATTTCT TATGGGATGTGTGTGTGGTGTGGAGGGCACACCTGGTTAAACTTCTCGTG AGAGAGGGGGCAGCTGGCCCGGGTTCAGCGCGCCCACTGGATCTAATCTT TGACAACACCCCGAAGGTAGACCTGCGACAGGTCATCTGACACGTCACAA TCTACGAGCCATTCTGGGGTGACATGAACAGATCACTCGGCTCCATCAGG CCATGTTTTAAGGTATTACAAGCTCTCCCTTCGGGACGTGGGTGTCTACC CTCCCTCGGGTGACGCAAGACCACATGCGCATTGTCCGAAGAGGGGACTG TGTGTCTTACAACGCTTGCATTTCCGCACAAAACATCGCGCAATTATTCT GCATTATTGGAGCCAGCTCGAGCGGACAACATTTTGGCAGCGAAAACCCA GACTTCCATGATGTAATTGATTGATGATGGCAGATTTCCGATGAGAACCG AATTTGAAGCCGAAACAACACCACACATACATACATGGGACATGTTCAAC ACTGCGGCTGGATGCATACTCTCAGACTTGTCTACACTTGGCCCGCTGTG AAGTGTAGTAAACAAAGGTACTGCTGTTAGACAATATGCGATGACACGAA GAGTCACAGCCATGAATCATCGAATGACTGAATGAATGACCGAATGAAAG TGGAGAAGCAAGAGGCAAATTTTTCACACCATCGTATTTGATGGGTTTGA TAGGTTTCAGAATTGGTTCGCCAGGCTTTGTCAGCGCGGAACGCGTCCCC GGGGTTTTGAGCCAGTTTTCCCAACTTTGGCCGTCAACCACACGCGCCAC GGAGGCCTACCGAGCTCCGGGCACGGGCGTTAATATACCGACGAGCCTCC TGCGTGCTCCTGAGGAGGAATTGTGATAAAAGACTCGTTGCCGCGAGAGA AAAAAACGCCGAAGCATGAAAAGTGACCAAATCTTATATGTACATATGTA GCATACCACCCAAGTAAAGGCCCTGAAAATCTTAAGTTGGGCGGGGGGTA TCTGGGGCCAAATGACGGTGATTGATCAGCAGGGAAATCACACTCGAGCC GATATATTATTGGAAGCAGGTGCTGTTCACCCTGCAAGACACCAGCTTTT ACTTTTACTCACAAGGATACTAGGGCCGCTTCTGGGTGCCTACGACAGCT ATGTACTACGTATGATGCTCTCACACATCAACGTTCAAGATATTTTTTCC GAGAAGTTGCGGATAGCCAATCCACCAGATAACTGCTTGGAATACACCCG AAGACACTCCTTCGTTCTCGGGCAAGTCTACAAGCGAGAACGGTGCGTTG GAGTCAGTTTACATAACAACGGGGCCGATACCTTTTGTTTCTATCTACTG CTGTGTGTACAGTTTGCAAGCACCATCAGCCCGGGGAGAAGTGGCTCCCG TCATGACAGGGTCTCTCGCTGCGAAGAAGAGGAAGTCACAGGTGCGTGGC TAGGGTGGAAAGTCCTCGGCTATGTATCGTAGCACCAGCTACCGATGGCT CCTTCGAGATTCGATGCGAAAAGAATAAAGCCAGTTCGTTGCGATTCTAC GTATGCATACATCAGTATCCTGCGCTTTTTGTTGTTTGTCTGAGCCGCAT AAATTATATTTACCAATATTCTTGTTAAGCTTGTACAACGTACGAGGCAT TTGGACAGGCTTTCGATCACACGGCCTGGCGATGTCCTCCTGTGTCCCGT CGTCTGCAGGAAAGTCGGCATAAGAGAGACGATTTCCTCAATCAGATGAC CAACTTCCTCGAAGGCATCGAGAGCAAGACGACGGCGGATGTGATTCCTC CTGAACCGCCGGTCTCCCTGGCACGCGCCGAGAGCTATACATCAACAGCG TTCCCTCCTGCGGCCACTGAGAGTGTGTCCGGCAAGCAAGTCTTGTGGGC TAATGCTGTACAAGACCGAAGAGCGTCTTCAGGAGCTGCCAGCGCAAGTT CCTCGCTGATGCAGGAAGACCTCTTTGGTGAGACCGTACGAGCCAAGTCG ACTCAGGTCGTACGTGACGCATCGTAGAACAGCAAAACCCAGCGATAATG CTTGGCGATCCAACGAACCTATTGCACGATGTGGTGTTCCTTCTGGGGAG TGTAGTGATCTTGCCAATTCAATTCCTGATCTGAGAGCATGTGGGAGCCA TGACCAAAACTGGTGCCCAACATCGTATTCTGTCGTATTCTGCATCGAGG TGTTGCACCTAACCTGGGGAGGGGGGGGGTCACCCACGGTAGGCATTGCC AACGTTTTCCGTAGCGCATGCACAATGCCGAAAACTGCTCAATGGTTTTC CGCGGTCGTTTGATGTAGTTCTTCCTGTCGGTTATAATTGCCTCTCATCC CTGGATATCTGGTGATGCCGCATCTCCTTCGCCGCAAGCTCTTGACTGAA TGACTGAACCCTTCCCACAGAGGACCCTTTCGTGCGAAAAGAGCTTCCCC TGGAAACGGCCAAGGCACACGGAGGGCTGCGGTCAGCGATGATTGGTGCG GAGAATACCGTATCTCATCCTCGAGGCAGCTTGTTCGACGACGATGACGT TGGCTTGGCGGATACTGGTCCGGAGGAGGAAGAAGACGAGGTTCAGAGTG GGCGCCAGGGAAGCGTACTCACGTCGGATCCAGTGGACTCTCCGCTCCAG CGCGTGGTGAGTGGGTCACAGTCAGCCTAGTGGGCGGAATTTCGCACGAC TAGCTTGTCTTTGATGTGTGCGGTGGCGCGTTCTGCTTGCTGACGTGGGT AGTCACAACGCAATGCTTTTCTCACCTGGCTCCCTCTGGTCTTGTGCTGC ATCGTTTCGTTTATATATTGACACAGACGTCGAGCCCTCTCCCCTTTTCG GCACCAACCCATGATACGCGAGCCTCGCTAGCTCAGGTGAGGCTTGCCGC TTTTTTGGCTGTGCTTTTGCTACAGAGGTTGGCTGCGGACAAGTCTGATG ACTCACAATGGTGCTTCGATGTTGGTCTGGCTGTTCGTGTGTCTGTCTTC GCGGCGCAGACAGCGAAAGGAACTAGATAGATATGTATACCATAACGTAT TCTCCAATGACAATGAGAAGACACTTTCTCTTGTGCTTGATCCCCGCAAA GTTTGGAAGCCCAACTGATACGTGCCACGCCAAATATGTACTCCGGTGTG TCCTTTGCCAAGGGCCGCTCGAGGAGCAAGTCCAAGCCATCTAGGGGCTT GGACCTGGAAGAAGTGCGCAGGCGCACCTCTCTCCTATCGGGCGGGTCAC GAGCACCCCCCCCTTCCGTCCCCGCCCCGGCACGCCCGGCCGCAGCCTCT CCCCGCCCCCCCCCCGCTGCTTCGTCGTATTTCGATGGCGGCTGGGGGCC ACAACAGCCCGCAGCACCGTCTGGCGAGGTGCCCCCACACCCTCTACATG CTGCACCATCGGACCCTCTCTTCTCTGGAGGAAATTACTTCAACGAAGAC CTCCTACGGGCGCGAGGGGAGCGCAGCTCGAGGACGGGGTTGGACGAAGG GCACACGAGTGGCCGCGGGGTGGGGCGGGGAGGCTGGGCAAGCGGTGACG CCTTGAAGGACTCGGCCGGGAGTTTTCTCAACACAGCCAGGTCAGCCTAA CGCTACAACAGCGCCGGCGTTTGGAAAGGCTCTGCTCCGATGAACAGCAC AACGTTGCCATACGGGCGTCGTGTAGTCTGGCATGGCACGCTTGTGTGTG TGAGGAGATAGTTCGTGTTGTCGTACATGGTACATACTGAGACGGTTCTC TGGATGGTGTTGCAAACTGCTGTACTTCCGTCGTCACGAGCTGGATGTTA CTTTGCGGTTTGTTGTTGGTTGGAAAAATTCTTGTTTGATGTGCAAACAA ACGTAGAAATTGTGTTTGCAGGTTACTTGGAAGAAGACGGCATGTTCACC GCGCTTGACGGATGCCGTCTAACTAATGTGATGTGTGCTGGATGGGGGTC CCAGGGATGGTGCAAAAACGCTTTTGCAGGATGCCAAAGCCGGGGTGGAC GCGGTTGGTGCTAGCTGGCAGAGTTCCCGCGATGAAAACGGGCAGCAGAG AGTTGCTGGCAGACCACCACGAGGATCGCGGCAGGAAGAAGTCGAGGGCG AGAGAGAGTTTGAGGTGGGTTCAAGAAGAGCCCGCCCCGCAAACTCACTG TTTTGTCAAGGCCGACGATAGGGGTGTGTGCTACCGGGAGAGGCACAGGG ACAAAGGGTGCGGCTGTTGTTTTGTTGTTGTTGCTATTGTTGTTGTTGTC TGGGTCGCGTGTCAGGCGCGTGGTTCGCTCCTCGTGCTGTACCTACAGTC CATAGGTCTCTGGTTTGCTTTCAACTTCCGGCACGGTGTTTCCCAACTTG TAGTTCAATCGCCCCCGTAATGCAAGGTGCTGGCCACGTTTCAATTGGGT TAAGTGCAACCCGCCAGGTTCACCGCATGTGTTTGCCGTGGAATTCTCTG ACCGGACAGTTTGCTGGACGCGGCTTGTCTCAAACGATACCGGTGACACA CTCAGGTCACGTTTGGAGAGGGGCGGTTTGGATTCACTCTGTTTCGGGAA GATGCTGGTCCAAGGAAAGGACAAGGCGTGGTGTGCAAGGTACACACGGG GAGCACGGCTCATTCGCTCGGGGTCAGCGAGGGTGATACGGTGACTGGCG TCAACAAACAGCGGTGAGAGTCGGTCTTGTCTTCCGTATTGCCGCCATGA CGCGTGTGATGGAGAGGCATTCACCGCCGAATTGTAAAGCTAGGGTGATG CATCACAGTGCTCGACATAGGCCGCGGCAGCCACAAGCTTTTCGCCTTGC AATTAACAGACGCCCCTTTGCCTTTCCATGATCGCAAAGGTACGAGACCT ACGACGACGTTATGGCAGTACTTCCAAAGCTTCCACGGCCTGTTCTAATA ACGTTTTCGCGTGGAGGAACCGGGTACTCCGCCGAAGGGCGTAGTATGGC TGCCAGACGAGCATCAACAATTTCCGAGGATGTGCAGGTGACGACTTGAC GCGATTGAGGTTCTTCCTAGAGAGACAGGTTGATGGCAGCAATGGACGGT GGGTGACCGTTTTCTTCTTGCTCGGTTGCCTTGTTTGCCAAAGCGTCATG GACTTTGTACGGTACTAAGCCCTGTTTCACCACTCACGTTCTAATTTTAA TACGTACTGTAGCCTATTTAGTTGTTTTTGGCATGCGTTGGCCCCTGTCT CTCTGCGCTAAAAAGCTCAAATTTAATCGATATCAAACAACGTGGATGCG TGATCAGGGTGGAGGAAACCCGCTGGAATGGCTTGCCAAGCTCAACCCGT TCGACAAGGGAAGGCGTGACGAAGAGGATGACCTGCGAGGCGAGCGTTAG TCGTTCGTACGGTATTGGCCGCCTCTTTCAGCAACCTCGTACGAACGTCA CTGTGCTTTCCAACGCGGATCTTTGCAGCGGCTCTGCTGGCACCGTTGTG GTTTTGGCTATTGCACATGATAGCGGGGGCGTTTTAGTGGTGAAAAAGCC TCGGGAATTGAAAGGAATTCGATTGGATTATCAGGTGCGTTTTTTTTTGT GTAGCGAAAGCGTGTGCTTCCGATGTTGACTGATGTGATTTTGCGCTTGC CTGTGCTCGTTCTTGTCGGCATCGTGTGGTGCTCTCCTTTGGCTTTCTGT ACGATCGCTGGGGCCGCCAGCCTCAGGGAAAAGTCAAGTGGACAGCAAGG TATTGGCTTCGCGAGAGGTAAGTGTGCGGCTGGCGCAGCCCCTGATCATG AGATTGCCTGCGTCGTCTGCTTTGCCACGGGTCTGTTGCTCCTTTATCGC GCTGTACGCGTATGATCATCGACCCTGTCTCAGCAGTACAGAATCAGTTG TACACTCACAATCTCTAATGCCAGCATCACGCGTGCCATGTACGGTTTAC ACAGCACGGATCCACGGGGGAAGTTTTCGCTAGAGGGGTGCGAGGAGGTG TGTTTTCGTGGTCCTACTACGGGACATCTGACGGCATCGAATCCAACACG AGGGACGCGTACACGGAGCACGTCATGAGATGTCAATGGGGGAAATCAGT ACACACTATGCACGAGATGTCGTGGATGGTTGCACGGAGGTGAGCATGGC TTAGAGGCATCGGGGTTGAGACCTGCGCGAAGGCTTCACATTTGTACCTG GTGTCGAGGCCGTGCTGTCCACGTCAGACTTAGGCAATACAGGCCTGGTG TTTGTCGTCTGTGACGATAATTGCGTTTATACACCAGGTCAAACTACGGC GGGCTGATGCTCCTGTGTTGCAACGTCAACAAGGTGCTGAAGGTTGCCGT GGCGGTGCCATTTCTCCTGTTTTTTGTTGCTCCCTTGAGACCCCCGTCGT GCGCTACCGTGCCTGCGGGTCTACAGGTACCGAGAATTTGACGCGTTGGA CCTTGACCTCCGTGACGCGTACCCCGACCGGAAAGATGCCCTCCCAAGGC TTCCCCCCAAGGTCGGTGCATGGAGGTGGAGGGAAACAATGTACCGCTGA CAGTAGTCTTCTTACAATTTAAGTTTTCTCTGAGAACGCTTCATTTCGCT TCTTTCGGCTTCTGTGAGCGCTCTATTCCGGTCTTCTCGGGCTCTCACAG AGCAGCATTTCCTCTGGAAGTTTGGCACTTTGGTGGACTTTCCACTTTTA TCTTCCGCTTTTATCTCTCTCTCCTGCTGCTGTCACCCCGCTCTTTACCA TCATACCACGCATCCCACTCGAAGTACGGCCCTCTCTGTGTGTGCCTCCT TCTCCTCCGTACCTCCGTCTCTCTATGCCTCTGACGGTCTGTCTATCCAC ATTCTCTTTTCATTTTCGCCTTCTCTCTTGACTGCTCTCGCGTCGGAATG TTCTGTTGTTTGTTCCGATTCCGTGTGCTACTGCTGTACATTTTTTTTTC TTTATTTTAACGCATTCACACGGTATGCACTCACCTCCTATCACCTTGGT ACCGTATTCTCTCTCTCTCCCTCGGTGTGTGTGTGTCTGTGTATCCACGT TGTCTTTAAATTTTTGTTTTTCTCTCTTCACCGCTCTCGCGTTGAAATGG TCTGTTGTTTGTTCCCATTCCGGCAACGGTGTTGTGTGCTCCGGTTCCGA TAATCCCTTCCAAAGGTCCAGAAAATACGAAAATACACTCCTTCCTACCT CCACTCTCGATGGTTACCCAGGCCCATCCTCCCACTCCTCTGTAGCTGCG CTACTACGCACTCCTTCTGTTACTTCGCACTCCTTCTGTAGTCTTCGACT CCATGTCTCGCCGCCATCTCTTCGACGACTCCCCCGCCCGAGCATCCTTT CTTCATTCGCAGTTCAGCCGACAATTTTGTCTATTTTTTGCAGTTCTGAG TTCTGGATGTGTATCAGATAATGGAGGGGTACCGGTCACGGCGATGGGAA ACAAATAATGGACCTTTACATCTCCTTAAATCACACACGAACCTCCATCA TGGGAACTCCACCTTCACGGAAACTTTAACTGCCATCGGTGCCTACCTTC ATTTCAACAACATCCTACACCCACTTTCAGAGAAAACATTGCATAGGAAT CGCTTCAAATAAAGCGGGGGCACGCAGCGCCCAACACCTTGTACACACAC AAATGGTGCAGGAAGTGGGCGAGAATGGGAAAGGGAGCGTTACTTGCGAC TCGCACAACGTTTGACTGTAGGATCATGTTCCACTTTTATATCGTTGTCA CTCCTAAACGCTCAATGTTGCCCCGCAATCGATCATATGCATATCTCCGG CTAAAGGAGTTTTTCAAGATGGCACCAGACGTGGTTGAACGCCGAGCGAA GGGACTGGAGTTGTACATGACCACGCTTATCCGAAGGTTTCCGGATATGC TGGCGTCCTCCCATCTTGACAGGTGCGGTATTATATAGCAGTAGTGGGAA GAGCTGCTTGTTGGAGAGGGTCTCAGGATGCAGATCGTTTTGTTTTCACA CGCGAGAAAATGAATCAAAGAAAATTGCGCAGAGGTTCAGTTGGTATCCT CGCGACCCTCTGACATTTGGACGGAAGTCCCAAAGTTGGAGGGGGGAAAT ACGTGATACCGTTCTGTGTTGCCAGGCTTGTGCGTCCAAAACACACCGAA TCGCGTAACTGACGTCTGGAATACACAGCATGACCGACTTTACGCACAAA CACGATCGCTCCCCTGGCAGATTCCTGACGATTTCGGAGCGCCTCTCGAC CCTGCAGACTCCGGCGGCAGTTGGAAGTAGCAGCCCAAGGTTATCGTATA GAAATCTTGGTGCGAATGGATCGTCCTCCAACGTTTTTCCTGCCCACAGC CCGGAATCGAGGTCCTCATCCCTGGTGGGGACAGACTACATCCTAAATGT AAGCGAACTTGCTTGGTGACTATCTGTGCTTCGGATCCTCTCGGGGACTT GGCGCGGCGCTCCTACAACAAGTCCACATCTGCTGCTCTCTTTGTGCGAG TGTCCCGATAAAATACACGAGGAAAGACTCCTATTTGAATCGAAGGGGCA TGTGTAAAATTCAAAATTTAATACAACCACGCAAACATCATTGCGAACAT GGACAATCACAGGCTAGCAAACTAGGATCGGCTGTGCTTCAAACCCGAGA CTGTCTGTCCTCTGAGTCAACCACCTACCTCCGAGCCTGTACACGAGACA GAAGGTCTCCCCTTTTTTCCGACCCAACACGATGGTCCCGTAAATTTTGT GGAGATTGTCGCTACGTCTCCAAGTACCGGCCCGTAATTTGTTTTCGTAC GTTTCGCATTTCCGTTTCGTGTGCGGTGCAGCTCATGTCTTCCGAGGAGG CTTGGAGATTGTCGCAGGCAAGACGTTCCAGCCCCGTGGATGTGGCTTTC GCAGAAGATCTTGTGCGCGAGCTCGAGGACCACATTTCGAGAATCCCCCC AGACGTGAGAAACAGCTGAACAGGTGTTGGTTGCTATTTGAATGTTTTGC TTCAAGGCATGGTCCACATAATAGTTGGACCCCCCACCAGCACGAACCAG CTGCCGTGTCACGCTCCTCACTTTGTGCGTTGTTTGCAGGAACACCTTCT GTCGGACGAGAAACTTTACGGTCTGGTCGCGCGCTGTCAGAAGGCTTGGC CGGGGTTGAAAAGTGCAGCTGCGGCGGCATCTGGCGCGTCGTCACCGACG CTCTTGCCGCGAATCGTGCAGTGCGACGAGGGCATGGAATGTGCTTTCGA AAACCTAAGGGCTCTTTTGACCAGCCGCGGTTACATCGGATGA
back to top

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig10:193227..203469+

>mRNA_Ecto-sp6_S_contig10.437.1 ID=mRNA_Ecto-sp6_S_contig10.437.1|Name=mRNA_Ecto-sp6_S_contig10.437.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2727bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:193227..203469+ (Ectocarpus species6 EcLAC_371)
ATGGACCAAGAGAAGGATGGACATGAGGGGGAAAAGGCGGATGTGGTTGG
AGGTGCATCAGGCCCCTTGGCGGAGGTAGATCCGTTCGCAGACCTGCTCG
AGCTCTCCTTTCCGAAGCCAGCCTCCAACACCGCTGGGGCGCCGCGCGCC
AAACCCGCAGCTAGTGCAAGTTTGCAAGCACCATCAGCCCGGGGAGAAGT
GGCTCCCGTCATGACAGGGTCTCTCGCTGCGAAGAAGAGGAAGTCACAGG
AAAGTCGGCATAAGAGAGACGATTTCCTCAATCAGATGACCAACTTCCTC
GAAGGCATCGAGAGCAAGACGACGGCGGATGTGATTCCTCCTGAACCGCC
GGTCTCCCTGGCACGCGCCGAGAGCTATACATCAACAGCGTTCCCTCCTG
CGGCCACTGAGAGTGTGTCCGGCAAGCAAGTCTTGTGGGCTAATGCTGTA
CAAGACCGAAGAGCGTCTTCAGGAGCTGCCAGCGCAAGTTCCTCGCTGAT
GCAGGAAGACCTCTTTGAGGACCCTTTCGTGCGAAAAGAGCTTCCCCTGG
AAACGGCCAAGGCACACGGAGGGCTGCGGTCAGCGATGATTGGTGCGGAG
AATACCGTATCTCATCCTCGAGGCAGCTTGTTCGACGACGATGACGTTGG
CTTGGCGGATACTGGTCCGGAGGAGGAAGAAGACGAGGTTCAGAGTGGGC
GCCAGGGAAGCGTACTCACGTCGGATCCAGTGGACTCTCCGCTCCAGCGC
GTGACGTCGAGCCCTCTCCCCTTTTCGGCACCAACCCATGATACGCGAGC
CTCGCTAGCTCAGGGCCGCTCGAGGAGCAAGTCCAAGCCATCTAGGGGCT
TGGACCTGGAAGAAGTGCGCAGGCGCACCTCTCTCCTATCGGGCGGGTCA
CGAGCACCCCCCCCTTCCGTCCCCGCCCCGGCACGCCCGGCCGCAGCCTC
TCCCCGCCCCCCCCCCGCTGCTTCGTCGTATTTCGATGGCGGCTGGGGGC
CACAACAGCCCGCAGCACCGTCTGGCGAGGTGCCCCCACACCCTCTACAT
GCTGCACCATCGGACCCTCTCTTCTCTGGAGGAAATTACTTCAACGAAGA
CCTCCTACGGGCGCGAGGGGAGCGCAGCTCGAGGACGGGGTTGGACGAAG
GGCACACGAGTGGCCGCGGGGTGGGGCGGGGAGGCTGGGCAAGCGGTGAC
GCCTTGAAGGACTCGGCCGGGAGTTTTCTCAACACAGCCAGGGATGGTGC
AAAAACGCTTTTGCAGGATGCCAAAGCCGGGGTGGACGCGGTTGGTGCTA
GCTGGCAGAGTTCCCGCGATGAAAACGGGCAGCAGAGAGTTGCTGGCAGA
CCACCACGAGGATCGCGGCAGGAAGAAGTCGAGGGCGAGAGAGAGTTTGA
GGTCACGTTTGGAGAGGGGCGGTTTGGATTCACTCTGTTTCGGGAAGATG
CTGGTCCAAGGAAAGGACAAGGCGTGGTGTGCAAGGTACACACGGGGAGC
ACGGCTCATTCGCTCGGGGTCAGCGAGGGTGATACGGTGACTGGCGTCAA
CAAACAGCGGTACGAGACCTACGACGACGTTATGGCAGTACTTCCAAAGC
TTCCACGGCCTGTTCTAATAACGTTTTCGCGTGGAGGAACCGGGTACTCC
GCCGAAGGGCGTAGTATGGCTGCCAGACGAGCATCAACAATTTCCGAGGA
TGTGCAGGGTGGAGGAAACCCGCTGGAATGGCTTGCCAAGCTCAACCCGT
TCGACAAGGGAAGGCGTGACGAAGAGGATGACCTGCGAGGCGAGCGGAAA
AGTCAAGTGGACAGCAAGGTATTGGCTTCGCGAGAGCACGGATCCACGGG
GGAAGTTTTCGCTAGAGGGGTGCGAGGAGGTGTGTTTTCGTGGTCCTACT
ACGGGACATCTGACGGCATCGAATCCAACACGAGGGACGCGTACACGGAG
CACGTCATGAGATGTCAATGGGGGAAATCAGTACACACTATGCACGAGAT
GTCGTGGATGGTTGCACGGAGGTACCGAGAATTTGACGCGTTGGACCTTG
ACCTCCGTGACGCGTACCCCGACCGGAAAGATGCCCTCCCAAGGCTTCCC
CCCAAGGAGTTTTTCAAGATGGCACCAGACGTGGTTGAACGCCGAGCGAA
GGGACTGGAGTTGTACATGACCACGCTTATCCGAAGGTTTCCGGATATGC
TGGCGTCCTCCCATCTTGACAGATTCCTGACGATTTCGGAGCGCCTCTCG
ACCCTGCAGACTCCGGCGGCAGTTGGAAGTAGCAGCCCAAGGTTATCGTA
TAGAAATCTTGGTGCGAATGGATCGTCCTCCAACGTTTTTCCTGCCCACA
GCCCGGAATCGAGGTCCTCATCCCTGGTGGGGACAGACTACATCCTAAAT
CTCATGTCTTCCGAGGAGGCTTGGAGATTGTCGCAGGCAAGACGTTCCAG
CCCCGTGGATGTGGCTTTCGCAGAAGATCTTGTGCGCGAGCTCGAGGACC
ACATTTCGAGAATCCCCCCAGACGAACACCTTCTGTCGGACGAGAAACTT
TACGGTCTGGTCGCGCGCTGTCAGAAGGCTTGGCCGGGGTTGAAAAGTGC
AGCTGCGGCGGCATCTGGCGCGTCGTCACCGACGCTCTTGCCGCGAATCG
TGCAGTGCGACGAGGGCATGGAATGTGCTTTCGAAAACCTAAGGGCTCTT
TTGACCAGCCGCGGTTACATCGGATGA
back to top