mRNA_Ecto-sp6_S_contig10.437.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.437.1 vs. uniprot
Match: D7G919_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G919_ECTSI) HSP 1 Score: 1546 bits (4004), Expect = 0.000e+0 Identity = 826/838 (98.57%), Postives = 828/838 (98.81%), Query Frame = 1
Query: 211 MTGSLAAKKRKSQESRHKRDDFLNQMTNFLEGIESKTTADVIPPEPPVSLARAESYTSTAFPPAATESVSGKQVLWANAVQDRRASSGAASASSSLMQEDLFEDPFVRKELPLETAKAHGGLRSAMIGAENTVSHPRGSLFDDDDVGLADTGPEEEEDEVQSGRQGSVLTSDPVDSPLQRVTSSPLPFSAPTHDTRASLAQGRSRSKSKPSRGLDLEEVRRRTSLLSGGSRAPXXXXXXXXXXXXXXXXXXXXXXSYFDGGWGPQQPAAPSGEVPPHPLHAAPSDPLFSGGNYFNEDLLRARGERSSRTGLDEGHTSGRGVGRGGWASGDALKDSAGSFLNTARDGAKTLLQDAKAGVDAVGASWQSSRDENGQQRVAGRPPRGSRQEEVEGEREFEVTFGEGRFGFTLFREDAGPRKGQGVVCKVHTGSTAHSLGVSEGDTVTGVNKQRYETYDDVMAVLPKLPRPVLITFSRGGTGYSAEGRSMAARRASTISEDVQGGGNPLEWLAKLNPFDKGRRDEEDDLRGERKSQVDSKVLASREHGSTGEVFARGVRGGVFSWSYYGTSDGIESNTRDAYTEHVMRCQWGKSVHTMHEMSWMVARRYREFDALDLDLRDAYPDRKDALPRLPPKEFFKMAPDVVERRAKGLELYMTTLIRRFPDMLASSHLDRFLTISERLSTLQTPAAVGSSSPRLSYRNLGANGSSSNVFPAHSPESRSSSLVGTDYILNLMSSEEAWRLSQARRSSPVDVAFAEDLVRELEDHISRIPPDEHLLSDEKLYGLVARCQKAWPGLKSAAAAASGASSPTLLPRIVQCDEGMECAFENLRALLTSRGYIG 2724
MTGSLAAKKRKSQESRHKRDDFLNQMTNFLEGIESKTTADVIPPEPPVSLARAESYTSTAFPPAATESVSGKQVLWANAVQDRRASSGAASASSSLMQEDLFEDPFVRKELP ETAKAHGGLRSAMI AENTVSHPRGSLFDDDDVGLADTGPEEEEDEVQSGR GSVLTSDPVDSPLQRVTSSPLPFSAPTHDTRASLAQGRSRSKSKPSRGLDLEEVRRRTSLLSGGSRAPXXXXXXXXXXXXXXXXXXXXXXSYFDGGWGPQQPAAPSGEVPPHPLHAAPSDPLFSGGNYFNEDLLRARGERSSRTGLDEGHTSGRGVGRGGWASGDALKDSAGSFLNTARDGAKTLLQDAKAGVDAVGASWQSSRDENGQQRVAGRPPRGSRQEEVEGEREFEVTFGEGRFGFTLFREDAGP+KGQGVVCKVHTGSTAHSLGVSEGDTVTGVNKQRYETYDDVMAVLPKLPRPVLITFSRGGTGYSAEGRSMAARRASTISEDVQGGGNPLEWLAKLNPFDKGRRDEED+LR KSQVDSKVLASREHG TGEVFARGVRGGVFSWSYYGTSDGIESNTRDAYTEHVMRCQWGKSVHTMHEMSWMVARRYREFDALDLDLRDAYPDRKDALPRLPPKEFFKMAPDVVERRAKGLELYMTTLIRRFPDMLASSHLDRFLTISERLSTLQTPAAVGSSSPRLSYRNLGANGSSSNVFPAHSPESRSSSLVGTDYILNLMSSEEAWRLSQARRSSPVDVAFAEDLV ELEDHISRIPPD HLLSDEKLYGLVARCQKAWPGLKSAAAAASGASSPTLLPRIVQCDEGMECAF NLRALLTSRGYIG
Sbjct: 1 MTGSLAAKKRKSQESRHKRDDFLNQMTNFLEGIESKTTADVIPPEPPVSLARAESYTSTAFPPAATESVSGKQVLWANAVQDRRASSGAASASSSLMQEDLFEDPFVRKELPPETAKAHGGLRSAMISAENTVSHPRGSLFDDDDVGLADTGPEEEEDEVQSGRHGSVLTSDPVDSPLQRVTSSPLPFSAPTHDTRASLAQGRSRSKSKPSRGLDLEEVRRRTSLLSGGSRAPXXXXXXXXXXXXXXXXXXXXXXSYFDGGWGPQQPAAPSGEVPPHPLHAAPSDPLFSGGNYFNEDLLRARGERSSRTGLDEGHTSGRGVGRGGWASGDALKDSAGSFLNTARDGAKTLLQDAKAGVDAVGASWQSSRDENGQQRVAGRPPRGSRQEEVEGEREFEVTFGEGRFGFTLFREDAGPKKGQGVVCKVHTGSTAHSLGVSEGDTVTGVNKQRYETYDDVMAVLPKLPRPVLITFSRGGTGYSAEGRSMAARRASTISEDVQGGGNPLEWLAKLNPFDKGRRDEEDELRASGKSQVDSKVLASREHGPTGEVFARGVRGGVFSWSYYGTSDGIESNTRDAYTEHVMRCQWGKSVHTMHEMSWMVARRYREFDALDLDLRDAYPDRKDALPRLPPKEFFKMAPDVVERRAKGLELYMTTLIRRFPDMLASSHLDRFLTISERLSTLQTPAAVGSSSPRLSYRNLGANGSSSNVFPAHSPESRSSSLVGTDYILNLMSSEEAWRLSQARRSSPVDVAFAEDLVHELEDHISRIPPDAHLLSDEKLYGLVARCQKAWPGLKSAAAAASGASSPTLLPRIVQCDEGMECAFGNLRALLTSRGYIG 838
BLAST of mRNA_Ecto-sp6_S_contig10.437.1 vs. uniprot
Match: A0A835YRV1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRV1_9STRA) HSP 1 Score: 310 bits (793), Expect = 1.240e-88 Identity = 250/675 (37.04%), Postives = 334/675 (49.48%), Query Frame = 1
Query: 781 PTHDTRASLAQGRSRSKSKPSRGLDLEEVRRRTSLLSGGSRAPXXXXXXXXXXXXXXXXXXXXXXSYFDGGWGPQQPAAPSGEVPPHPLHAAP---SDPLFSG-----GNYFNEDLLRARGERSSRTGLDEGHTSGRGVGRGGWASGDALKDSAGSFLNTARDGAKTLLQDAKAGVDAVGASWQSSRDENGQQRVAGRPPRGSRQEEVEGEREFEVTFGEGRFGFTLFREDAGPRKGQGVVCKVHTGSTAHSLGVSEGDTVTGVNKQRYETYDDVMAVLPKLPRPVLITFSR-GGTGYSAEGRSMAARRASTISEDVQGGGNPLEWLAKLNPFDKGRRDEEDDLRGERKS-QVDSKVLASREHGSTGEVFARGVRGGVFSWSYYGTSDGIES-----NTRDAYTEHVMRCQWGKSVHTMHEMSWMVARRYREFDALDLDLRDAYPDRKDALPRLPPKEFFKMAPDVVERRAKGLELYMTTLIRRFPDMLASSHLDRFLTISERLSTLQTPAAV--GSSS-------------PRLSYRNLGANGSSSNVFPAHSPESR----SSSLVGTDYILNLMSSEEAWRLSQARRSSPVDVAFA-----EDLVRELEDHISR----IPPDEHLLSDEKLYGLVARCQKAWPGLKSAAAAASGA-SSPTLLPRIVQCDEGME 2673
P R + A + K K +DLEE RRRT+LL G S G G AAP PP PL P +DPL +G G+YFNEDLLR R R++ G + + W +G A+ AGS ++ A+ GAK+LLQ A +A GS ++VTFG+GR GFT+ + + +G GVVCKV STA S GVS GDTV +N++R +YD+VM+VLP +PRPVL+TF++ G A G++ A D QG WL L+PF G+R L G+ S +V+++ L R G V GVFSWS YGTSDG E+ +T D YTE+VMRCQWG + H WMVARRYREFDALD DLR+ +P KD+ P LPPKE FK + +VV RR GLE YMT LI PD+L ++RFL I ER++ ++ + GSS P LS + + A SR ++LVGTDY+LNLM++ EA+ L +AR + + A E+ VR L + + L D +L+GL CQ++WP LK+ AA A +LP ++QCDE +E
Sbjct: 189 PARPARVASAAPAAAGKPKSRGSIDLEEARRRTALLMGDGA----------------YSRRSSSGSVGAGMAGAAAEAAPVRREPP-PLATRPQMPADPLGAGSSDAGGSYFNEDLLRQRQARAATYGSTYPYDANEQDASSAWDTG-AILGRAGSMVSAAKSGAKSLLQRANGYGNAXXXXXXXXXX-------------GS----------YDVTFGDGRLGFTMLKSE----QGLGVVCKVQPDSTAASAGVSPGDTVVAINRRRMSSYDEVMSVLPSMPRPVLVTFAKPDGEPQLANGQA-ALTGGGAWEADGQGSKG---WLGNLDPFKSGKRRSSAGLSGDNASWRVENQDLQFRRPDFHGVVVH--AHNGVFSWSLYGTSDGSEAPGARLSTGDTYTEYVMRCQWGPDL--QHMSPWMVARRYREFDALDKDLREVFPHLKDSFPSLPPKELFKTSQEVVSRRRVGLEQYMTFLIGNCPDVLCCPQMNRFLGIDERIAAIKGQGGLRRGSSGAPAXXXXXXXXXVPSLSASTSSGPLQARLLLCATEASSRITVGCAALVGTDYLLNLMTAGEAYDLMRARAGALRPLTRAGLQAVEEAVRRLRQRVDDWGRGVAVVADPLHDAELHGLAEICQQSWPALKATAARADDTPEGMDMLPSVLQCDEDIE 810
BLAST of mRNA_Ecto-sp6_S_contig10.437.1 vs. uniprot
Match: A0A7S1U6D7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U6D7_9STRA) HSP 1 Score: 132 bits (333), Expect = 5.830e-30 Identity = 97/285 (34.04%), Postives = 143/285 (50.18%), Query Frame = 1
Query: 1879 GVFSWSYYGTSDGIESNTRDAYTEHVMRCQWGKSVHTMHEMSWMVARRYREFDALDLDLRDAYPDRKDALPRLPPKEFFK-MAPDVVERRAKGLELYMTTLIRRFPDMLASSHLDRFLTISERLSTL-------QTPAAVGSSSPRLSYRNLGANGSSSNVFPAHSPESRSSSLVGTDYILNLMSSEEAWRLSQARRSSPVD---VAFAEDLVRELEDHISRIPPDEHLLSDEKLYGLVARCQKAWPGLKSAAAAASGASSPTLLPRIVQCDEGMECAFENLRAL 2700
GVFS+ Y TS +T YTE+VM+C +G + SW+VARRY EF A+D LR+ YP P LP KE++ M+ + V+RR GL YM LIR FP +L S ++ FL ++ER S + AA SSS R S N A+ + L L L++SE+ + P+D + AE V++L+ H++ + E ++ D+ L L+ + WP L++ A A+ A P L PR +QCDE + +LR+L
Sbjct: 66 GVFSFQMYSTSTASNPDTGSPYTEYVMQCAYGPGFDNLR--SWLVARRYSEFYAMDTALRETYPALAPRFPNLPAKEYYNSMSAETVQRRRSGLNGYMKMLIREFPTVLKSRTMNEFLQVAERASDVLRTADIFMAEAAERSSSIRRSNSN--ASQPRERRLRRSPSNDAENDLTDPTEALPLITSEQVDLYVAEQAPGPMDWESLTAAEREVQKLQAHVAHLSAKERIVEDQVLLELLQATLRFWPRLRATGALAADAD-PLLTPRALQCDEELGRVVADLRSL 345
BLAST of mRNA_Ecto-sp6_S_contig10.437.1 vs. uniprot
Match: A0A7S3K4V4_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4V4_9STRA) HSP 1 Score: 121 bits (304), Expect = 1.370e-24 Identity = 74/162 (45.68%), Postives = 95/162 (58.64%), Query Frame = 1
Query: 1822 LASREHGSTGEVFARGVRGGVFSWSYYGTSDGIESNTRDAYTEHVMRCQWGKSVHTMHEMSWMVARRYREFDALDLDLRDAYPDRKDALPRLPPK-EFFKMAPDVVERRAKGLELYMTTLIRRFPDMLASSHLDRFLTISERLSTLQTPAAVGSSSPRLSYR 2304
LA H G+ A GGVFS S YGT++ + T + YTE+++RCQ+GK+ TM WMVARR+REF A+D +LR A PD LP LP FF M+P VVE+R GLE Y+ TLI FP L S LD FL I R++ P + S++ S R
Sbjct: 601 LALHRH-ELGKAAATYAFGGVFSCSMYGTAEAKDFETGEPYTEYIIRCQFGKTFETMKP--WMVARRFREFVAVDANLRAALPDLAPHLPPLPSSFVFFAMSPQVVEQRQHGLEQYLKTLITEFPATLKSPQLDEFLCIHSRIAASTAPRSSTSNASATSSR 759
BLAST of mRNA_Ecto-sp6_S_contig10.437.1 vs. uniprot
Match: A0A7S2BPG0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BPG0_9STRA) HSP 1 Score: 113 bits (283), Expect = 3.860e-24 Identity = 90/285 (31.58%), Postives = 134/285 (47.02%), Query Frame = 1
Query: 1876 GGVFSWSYYGTSDGIESNTRDAYTEHVMRCQWGKSVHTMHEMSWMVARRYREFDALDLDLRDAYPDRKDALPRLPPKEFF-KMAPDVVERRAKGLELYMTTLI--RRFPDMLASSHLDRFLTISERLSTLQTPAAVGSSSPRLSYRNLGANGSSSNVFPAHSPESRSSSLVGTDYILNLMSSEEAWRLSQARRSSP-----VDVAFAEDLVRELEDHISRIPPDEHLLSDEKLYGLVARCQKAWPGLKSAAAAASGASSPTLLPRIVQCDEGMECAFENLRALLT 2706
GG+F + YGT+D ++ T YTE+V+RCQWG+S +M W+VARRYREF ALD L+ A+PD + LP LP K F ++ D V R + LE Y+T L+ + + S+ +D FL IS+R+ +Q G S P + + + I+ L+S+ +A +A S ++A E V L + + P + K L + CQK WP LK+ SS L+PR +Q DE + L + T
Sbjct: 12 GGIFGCTMYGTADALDMETGQTYTEYVLRCQWGESFPSMKP--WIVARRYREFCALDSSLKYAFPDLAEYLPGLPRKHIFGTLSSDTVNVRQRQLEDYLTRLMTDEKLAVTMKSAQIDEFLMISQRIKLIQE---TGQSVPNMQ-------------------DDTDIISIPPGKIIQLLSAADAQEAFEANNYSERPLTSAELALLEADVLTLSNLTENLDPKVPISRGTKK--LASLCQKEWPKLKATGCVDGHNSS--LVPRALQLDEDLTRIASTLSTIAT 268
BLAST of mRNA_Ecto-sp6_S_contig10.437.1 vs. uniprot
Match: A0A1W0A1M2_9STRA (PX domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A1M2_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 6.240e-13 Identity = 40/115 (34.78%), Postives = 68/115 (59.13%), Query Frame = 1
Query: 1900 YGTSDGIESNTRDAYTEHVMRCQWGKSVHTMHEMSWMVARRYREFDALDLDLRDAYPDRKDALPRLPPKEFF--KMAPDVVERRAKGLELYMTTLIRRFPDMLASSHLDRFLTIS 2238
+G+ + ++ ++ YTE+++RC + + +W ARRYREF A+D+ LR+ YP LP LP K++ +A D VE+R + L Y+TTL+ +P++ +D FL +S
Sbjct: 12 FGSYEALDQDSGKFYTEYILRCTQQDGLRSQ---TWKTARRYREFCAIDVLLREKYPHLSATLPPLPSKKYLGSSLASDFVEKRQRELGQYITTLLLLYPELAKDEIVDEFLELS 123
BLAST of mRNA_Ecto-sp6_S_contig10.437.1 vs. uniprot
Match: A0A067CTP4_SAPPC (PX domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CTP4_SAPPC) HSP 1 Score: 74.3 bits (181), Expect = 4.350e-12 Identity = 44/131 (33.59%), Postives = 72/131 (54.96%), Query Frame = 1
Query: 1852 EVFARGVRGGVFSWSYYGTSDGIESNTRDAYTEHVMRCQWGKSVHTMHEMSWMVARRYREFDALDLDLRDAYPDRKDALPRLPPKEFF--KMAPDVVERRAKGLELYMTTLIRRFPDMLASSHLDRFLTIS 2238
EV V+ VF G+ + ++ ++ YTE+++RC + SW ARRYREF A+D+ LR+ YP + P LP K++ ++ D VE+R + L Y++TL+ +P +L +D FL +S
Sbjct: 3 EVMHEAVKVDVF-----GSYEALDQDSGKFYTEYILRCNVQDPSARLR--SWNAARRYREFCAIDILLREKYPHLASSFPSLPSKKYLGSSLSSDFVEKRQRDLGHYISTLLSLYPQLLHDEIMDEFLELS 126
BLAST of mRNA_Ecto-sp6_S_contig10.437.1 vs. uniprot
Match: A0A1V9Z4F0_9STRA (PX domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z4F0_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 1.160e-11 Identity = 38/116 (32.76%), Postives = 70/116 (60.34%), Query Frame = 1
Query: 1900 YGTSDGIESNTRDAYTEHVMRCQWGKSVHTMHEM-SWMVARRYREFDALDLDLRDAYPDRKDALPRLPPKEFF--KMAPDVVERRAKGLELYMTTLIRRFPDMLASSHLDRFLTIS 2238
+G+ + ++ ++ YTE+++RC +V + +W ARRYREF A+D+ LR+ YP + P LP K++ ++ D VE+R + L+ Y+++L+ +P +L +D FL +S
Sbjct: 17 FGSYEALDQDSGKFYTEYILRC----NVQDPGRLRTWNTARRYREFCAIDILLREKYPHLASSFPSLPSKKYLGSSLSSDFVEKRQRDLDQYISSLLNLYPQLLQDELVDEFLELS 128
BLAST of mRNA_Ecto-sp6_S_contig10.437.1 vs. uniprot
Match: A0A3R8CJ93_9STRA (PX domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3R8CJ93_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 2.840e-11 Identity = 40/128 (31.25%), Postives = 68/128 (53.12%), Query Frame = 1
Query: 1879 GVFSWSYYGTSDGIESNTRDAYTEHVMRCQWGKSVHTMH---EMSWMVARRYREFDALDLDLRDAYPDRKDALPRLPPKEFF--KMAPDVVERRAKGLELYMTTLIRRFPDMLASSHLDRFLTISERL 2247
G F G+ + ++ + YTE+++RC W K T ++ W V RRYREF A+D+ LR+ YP R P LP K++ ++ D V++R + L Y+ +++ P ++ +D FL I +
Sbjct: 18 GDFRVEVLGSQESLDLDCGKFYTEYILRCSWIKCNGTPEVKLQLIWDVVRRYREFCAIDILLREKYPSRAPMFPYLPSKKYIGSSLSADFVDKRQRDLGYYIMSILHSCPLLVQDEIIDSFLDIKRHI 145
BLAST of mRNA_Ecto-sp6_S_contig10.437.1 vs. uniprot
Match: A0A225X2H2_9STRA (PX domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X2H2_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 5.020e-11 Identity = 40/125 (32.00%), Postives = 66/125 (52.80%), Query Frame = 1
Query: 1879 GVFSWSYYGTSDGIESNTRDAYTEHVMRCQWGKSVHTMHEMSWMVARRYREFDALDLDLRDAYPDRKDALPRLPPKEFF--KMAPDVVERRAKGLELYMTTLIRRFPDMLASSHLDRFLTISERL 2247
G F G+ + ++ + YTE+++RC W + T W V RRYREF A+D+ LR+ YP R P LP K++ ++ D V++R + L YM +++ P ++ +D FL I +
Sbjct: 20 GDFRVEVMGSQESLDLDCGKFYTEYILRCSWIERNATPE--IWDVVRRYREFCAIDILLREKYPSRASLFPYLPSKKYIGSSLSADFVDKRQRDLGYYMMSILHSCPLLVQDEIIDSFLDIKRHI 142 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.437.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig10.437.1 >prot_Ecto-sp6_S_contig10.437.1 ID=prot_Ecto-sp6_S_contig10.437.1|Name=mRNA_Ecto-sp6_S_contig10.437.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=909bp MDQEKDGHEGEKADVVGGASGPLAEVDPFADLLELSFPKPASNTAGAPRAback to top mRNA from alignment at Ecto-sp6_S_contig10:193227..203469+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig10.437.1 ID=mRNA_Ecto-sp6_S_contig10.437.1|Name=mRNA_Ecto-sp6_S_contig10.437.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=10243bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:193227..203469+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig10:193227..203469+ >mRNA_Ecto-sp6_S_contig10.437.1 ID=mRNA_Ecto-sp6_S_contig10.437.1|Name=mRNA_Ecto-sp6_S_contig10.437.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2727bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:193227..203469+ (Ectocarpus species6 EcLAC_371)back to top |