mRNA_Ecto-sp6_S_contig10.417.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig10.417.1
Unique NamemRNA_Ecto-sp6_S_contig10.417.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.417.1 vs. uniprot
Match: D7G937_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G937_ECTSI)

HSP 1 Score: 613 bits (1580), Expect = 1.510e-218
Identity = 353/356 (99.16%), Postives = 353/356 (99.16%), Query Frame = 1
Query:  169 LLASNNIMYDRRVVRGNTYAAQVVTQSAQRESLRLRQEHERRMRLEALRRRQAAEFSNMPRTPPPVQGRMHMDAQTEEFLEELTDRPVETSIETQTEAFMDRPSSPLFVPAKSGVDADTQVVVGELFDFDLEVEPILEVLVGKTLELSVLELMEASGEEELAVIRRRQATFARERDAEMAEVQRMEAEAKRKSAEKMRRMKQQQEVKKAREALLEKVAARSFAKNYLSNLKTDVFDDLEDEGHFYDPLSKEVKEVFLPWLMGDMVRKVDKAVESMAVVDGLLSGATEHASRIHREAVEAKEAERARIVAEALAEAEEARRKVEEEEAAIRAAQEALEREEAGEGEDGEGGDPTPDE 1236
            LLASNNIMYDRRVVRGNTYAAQVVTQSAQRESLRLRQEHERRMRLEALRRRQAAEFSNMPRTPPPVQGRMHMDAQTEEFLEELTDRPVETSIETQTEAFMDRPSSPLFVPAKSGVDADTQVVVGELFDFDLEVEPILEVLVGKTLELSVLELME   EEELAVIRRRQATFARERDAEMAEVQRMEAEAKRKSAEKMRRMKQQQEVKKAREALLEKVAARSFAKNYLSNLKTDVFDDLEDEGHFYDPLSKEVKEVFLPWLMGDMVRKVDKAVESMAVVDGLLSGATEHASRIHREAVEAKEAERARIVAEALAEAEEARRKVEEEEAAIRAAQEALEREEAGEGEDGEGGDPTPDE
Sbjct:   35 LLASNNIMYDRRVVRGNTYAAQVVTQSAQRESLRLRQEHERRMRLEALRRRQAAEFSNMPRTPPPVQGRMHMDAQTEEFLEELTDRPVETSIETQTEAFMDRPSSPLFVPAKSGVDADTQVVVGELFDFDLEVEPILEVLVGKTLELSVLELME---EEELAVIRRRQATFARERDAEMAEVQRMEAEAKRKSAEKMRRMKQQQEVKKAREALLEKVAARSFAKNYLSNLKTDVFDDLEDEGHFYDPLSKEVKEVFLPWLMGDMVRKVDKAVESMAVVDGLLSGATEHASRIHREAVEAKEAERARIVAEALAEAEEARRKVEEEEAAIRAAQEALEREEAGEGEDGEGGDPTPDE 387          
BLAST of mRNA_Ecto-sp6_S_contig10.417.1 vs. uniprot
Match: A0A7S2C2M4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C2M4_9STRA)

HSP 1 Score: 317 bits (812), Expect = 3.340e-102
Identity = 198/350 (56.57%), Postives = 248/350 (70.86%), Query Frame = 1
Query:   49 AFTYSSEPQAVPSKRSTVRSKYREDAATVPDAAQWIDENDLLASNNIMYDRRVVRGNTYAAQVVTQSAQRESLRLRQEHERRMRLEALRRRQAAEFSNMPRTPPPVQGRMHMDAQTEEFLEELTDRPVETSIETQTEAFMDRPSSPLFVPAKSGVDADTQVVVGELFDFDLEVEPILEVLVGKTLELSVLELMEASGEEELAVIRRRQATFARERDAEMAEVQRMEAEAKRKSAEKMRRMKQQQEVKKAREALLEKVAARSFAKNYLSNLKTDVFDDLEDEGHFYDPLSKEVKEVFLPWLMGDMVRKVDKAVESMAVVDGLLSGATEHASRIHREAVEAKEAERARIVAE 1098
            AF Y+SEPQAVP+KR+  R+KYRE      D        DL  SNNIM+DRRVVRGNTYAAQVVTQ+A +E  RLR E+ER M+ E  RR++ A     PRTPPPV GR+HMD QTE FLEELTDRP+E   +TQTEAF+DRP SPLFVPAKSGVD  TQ+   ++F+FD EV+PILEVLVGKTL++S+LE+ME   EEEL+ IR+RQ  F + R+AE+ EVQR+EAEA R+ AEK           + ++ L EKVAARSFAK+YL++L +DVF  LE+ GHFYDP+ KEV + FLPWLM  +V +VD    + A+ D LL+ A + A  +        EAE+AR+ AE
Sbjct:    6 AFMYASEPQAVPTKRT--RAKYREGGEGETD--------DLTLSNNIMFDRRVVRGNTYAAQVVTQNATQEMERLRSENERAMKRELQRRKREA--GKAPRTPPPVDGRVHMDVQTETFLEELTDRPIEVDADTQTEAFLDRPPSPLFVPAKSGVDKGTQIDTDQVFNFDAEVKPILEVLVGKTLQVSMLEVME---EEELSAIRKRQDEFEQMRNAELMEVQRLEAEATRRFAEKXXXXXXXXXXTRLQQELKEKVAARSFAKSYLTDLHSDVFMALEETGHFYDPVRKEVSDDFLPWLMDSVVTEVDSVQTAHALADDLLTVALQKAIELQAAETAIFEAEQARVAAE 340          
BLAST of mRNA_Ecto-sp6_S_contig10.417.1 vs. uniprot
Match: A0A836CGH7_9STRA (Radial spoke 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGH7_9STRA)

HSP 1 Score: 304 bits (778), Expect = 7.760e-98
Identity = 172/253 (67.98%), Postives = 202/253 (79.84%), Query Frame = 1
Query:  190 MYDRRVVRGNTYAAQVVTQSAQRESLRLRQEHERRMRLEALRRRQAAEFSNMPRTPPPVQGRMHMDAQTEEFLEELTDRPVETSIETQTEAFMDRPSSPLFVPAKSGVDADTQVVVGELFDFDLEVEPILEVLVGKTLELSVLELMEASGEEELAVIRRRQATFARERDAEMAEVQRMEAEAKRKSAEKMRRMKQQQEVKKAREALLEKVAARSFAKNYLSNLKTDVFDDLEDEGHFYDPLSKEVKEVFLPWL 948
            M+DRRVVRGNTY+AQV+T  A+RE+ RLR + ERRM+ EALRRR  A+    P TPPP  GR HMD QT+EFLEEL DRPVE   +TQT+A  DRP+SPLFV AK+G DA+TQV VGELFDFD EVEP+LEVLVGKTLELS+LEL+E   EEEL  +RRRQ  FA  RDAE+AEVQR+EAEA+R++AEK RR+KQ QE ++AREA   KVAARSFA+ YLS+L  DVF  LE EGHFYDPL +EV E F+PWL
Sbjct:    1 MFDRRVVRGNTYSAQVITMGARREAERLRADQERRMKAEALRRRLEAQARMRPGTPPPASGRTHMDMQTDEFLEELRDRPVEADADTQTDALRDRPASPLFVRAKTGTDAETQVEVGELFDFDAEVEPLLEVLVGKTLELSMLELLE---EEELEAVRRRQRAFAAARDAELAEVQRLEAEARRRTAEKQRRLKQAQESRRAREAAAAKVAARSFARTYLSSLNADVFGGLEAEGHFYDPLRREVAEAFMPWL 250          
BLAST of mRNA_Ecto-sp6_S_contig10.417.1 vs. uniprot
Match: A0A7S2GZH4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GZH4_9STRA)

HSP 1 Score: 284 bits (726), Expect = 3.010e-89
Identity = 174/336 (51.79%), Postives = 238/336 (70.83%), Query Frame = 1
Query:   52 FTYSSEPQAV-PSKRSTVRSKYREDAATVPDAAQWIDENDLLASNNIMYDRRVVRGNTYAAQVVTQSAQRESLRLRQEHERRMRLEALRRRQAAEFSNMPRTPPPVQGRMHMDAQTEEFLEELTDRPVETSIETQTEAFMDRPSSPLFVPAKSGVDADTQVVVGELFDFDLEVEPILEVLVGKTLELSVLELMEASGEEELAVIRRRQATFARERDAEMAEVQRMEAEAKRKSAEKMRRMKQQQEVKKAREALLEKVAARSFAKNYLSNLKTDVFDDLEDEGHFYDPLSKEVKEVFLPWLMGDMVRKVDKAVESMAVVDGLLSGATEHASRIHREA 1056
            + + SEPQAV P KR+  + KYR        A    DEN  L SNNIMYDRRVVRGNT+AAQ+VTQ+AQ E  R+R  +++  +    R ++  E +  P TPPP++GR+H D QT+ +LEELTDRP+ET  ETQTEA +DRP SP F+PAK+GVD +TQ+    +FDFD+EV PILEV+VGKTL+ S+LE+ME   EEEL+ IR+RQ  F + RDAE+ EVQR+EAEA R   EK RR+KQ++E K+ ++ L EK+AARSFAKNY S+L + VF  LE+ GHFYDP+++EV+++FLPWL+ ++V   D    + +  D L+  A +  + + ++A
Sbjct:   17 YMHESEPQAVNPMKRA--KPKYR--------AENENDENGDL-SNNIMYDRRVVRGNTHAAQIVTQNAQMEMERIRILNDKEFKRNQARIKR--ERNKRPSTPPPIEGRVHTDCQTDRYLEELTDRPIETEAETQTEAILDRPPSPHFMPAKTGVDVETQIDPELVFDFDVEVTPILEVIVGKTLQTSMLEVME---EEELSAIRKRQDEFEQMRDAELLEVQRLEAEAARAFDEKNRRLKQEKERKRLQKELKEKIAARSFAKNYTSDLTSSVFATLEEAGHFYDPVNREVEQLFLPWLLDEVVSNADAVQAAQSATDSLIKEALKKTTELQKKA 336          
BLAST of mRNA_Ecto-sp6_S_contig10.417.1 vs. uniprot
Match: A0A6H5JGL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGL2_9PHAE)

HSP 1 Score: 271 bits (692), Expect = 3.170e-87
Identity = 155/160 (96.88%), Postives = 157/160 (98.12%), Query Frame = 1
Query:  757 MRRMKQQQEVKKAREALLEKVAARSFAKNYLSNLKTDVFDDLEDEGHFYDPLSKEVKEVFLPWLMGDMVRKVDKAVESMAVVDGLLSGATEHASRIHREAVEAKEAERARIVAEALAEAEEARRKVEEEEAAIRAAQEALEREEAGEGEDGEGGDPTPDE 1236
            MRRMKQQQEVKKAREALLEKVAARSF KNYLS+LKTDVFDDLEDEGHFYDPLSKEVKEVFLPWLMGDMVRKVDKAVESMAVVDGLLSGAT HASRIHREAVEAK+AER RIVAEALAEAEEARRKVEEEEAAIRAAQEALEREEAGEGEDGEGGDPTPDE
Sbjct:    1 MRRMKQQQEVKKAREALLEKVAARSFTKNYLSSLKTDVFDDLEDEGHFYDPLSKEVKEVFLPWLMGDMVRKVDKAVESMAVVDGLLSGATAHASRIHREAVEAKQAERTRIVAEALAEAEEARRKVEEEEAAIRAAQEALEREEAGEGEDGEGGDPTPDE 160          
BLAST of mRNA_Ecto-sp6_S_contig10.417.1 vs. uniprot
Match: F0YLW3_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLW3_AURAN)

HSP 1 Score: 263 bits (672), Expect = 4.970e-82
Identity = 171/328 (52.13%), Postives = 215/328 (65.55%), Query Frame = 1
Query:   46 TAFTYSSEPQAVPSKRSTVRSKYREDAATVPDAAQWIDENDLLASNNIMYDRRVVRGNTYAAQVVTQSAQRESLRLRQEHERRMRLEALRRRQAAEFSNMPRTPPPVQGRMHMDAQTEEFLEELTDRPVETSIETQTEAFMDRPSSPLFVPAKSGVDADTQVVVGELFDFDLEVEPILEVLVGKTLELSVLELMEASGEEELAVIRRRQATFARERDAEMAEVQRMEAEAKRKSAEKMRRMKQQQEVKKAREALLEKVAARSFAKNYLSNLKTDVFDDLEDEGHFYDPLSKEVKEVFLPWLMGDMVRKVDKAVESMAVVDGLLSGATE 1029
            +A+ +S+ P+ V SK   ++  YR+            ++ + LA NNIM+DRRVVRGNTYAAQVVTQ+AQRE  RLRQE+ER +R EA RRR+  E    P TPP V GR HM+AQTE FLEEL DRPVE    TQTE F+DRP   LFVP+K+GVD +T++  G+LFDFD+EV+PILEVLVGKTL +S+LE+ME   EEEL  IRRRQ  F + R+AE+ EVQR++A                         L  KVAARSFA+NYL +L   VFD LE  GHFYDP+ KEV++VFLPWL+  +V   D    + A  D L++ A E
Sbjct:    4 SAYIHSTSPKPVSSK---MKKAYRD------------EDEENLAGNNIMFDRRVVRGNTYAAQVVTQNAQREVERLRQENERTLRREATRRRR--EQLEKPSTPPAVDGRAHMEAQTETFLEELADRPVEAEATTQTEPFVDRPPQVLFVPSKTGVDKETEIPGGDLFDFDVEVKPILEVLVGKTLRISMLEVME---EEELEAIRRRQREFEQMRNAELMEVQRLDAXXXXXXXXXXXXXXXXXXXXXXXXXLETKVAARSFARNYLVDLSDAVFDALETTGHFYDPVLKEVEDVFLPWLLDGVVADADNHGAARACSDALVADAME 311          
BLAST of mRNA_Ecto-sp6_S_contig10.417.1 vs. uniprot
Match: A0A7S3ZX10_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZX10_9STRA)

HSP 1 Score: 259 bits (663), Expect = 8.990e-80
Identity = 158/314 (50.32%), Postives = 217/314 (69.11%), Query Frame = 1
Query:  157 DENDLLASNNIMYDRRVVRGNTYAAQVVTQSAQRESLRLRQEHERRMRLEALRRRQAAEFSNMPRTPPPVQGRMHMDAQTEEFLEELTDRPVETSIETQTEAFMDRPSSPLFVPAKSGVDADTQVVVGELFDFDLEVEPILEVLVGKTLELSVLELMEASGEEELAVIRRRQATFARERDAEMAEVQRMEAEAKRKSAEKMRRMKQQQEVKKAREALLEKVAARSFAKNYLSNLKTDVFDDLEDEGHFYDPLSKEVKEVFLPWLMGDMVRKVDKAVESMAVVDGLLSGATEHASRIHREAV-EAKEAERARIVA 1095
            DE +++ +NNIM+DRRVVRGNTYAAQVVT + QRE  R+R E ER +R +A  +R+  E    P TPPP +GR H+ AQT+ FLEEL+DRPVE+   TQTEA +DRP SPLF+P+K+GVD +T +  G+LFDFD+EV+PILEVLVGKTL +S++E+ME   E EL  I+RRQ  F + R+AE+ EVQR++AEA R+               + +  L +KVAAR+FA++YL+NL    FD LED GHF DP+ KE+++ F+PWL   +V   +  + S + VD L+  A E AS +  + + + K+ ERAR+ A
Sbjct:   57 DEENII-TNNIMFDRRVVRGNTYAAQVVTHNTQREVERMRYESERTLRRDATCQRK--ERLAKPSTPPPAEGRAHIKAQTDTFLEELSDRPVESEAVTQTEAILDRPPSPLFIPSKTGVDKETDIPGGDLFDFDIEVKPILEVLVGKTLRVSMMEVME---EAELDAIQRRQMEFEQMRNAELVEVQRLDAEASRRFXXXXXXXXXXXXXXRQQAELGQKVAARAFARSYLANLSELAFDQLEDSGHFVDPVEKEIQDSFIPWLFDSVVETTNNHISSSSCVDALIVDAIELASNLQSDVIKQIKQKERARVFA 364          
BLAST of mRNA_Ecto-sp6_S_contig10.417.1 vs. uniprot
Match: A0A7S1CEJ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CEJ9_9STRA)

HSP 1 Score: 247 bits (630), Expect = 2.030e-75
Identity = 168/333 (50.45%), Postives = 211/333 (63.36%), Query Frame = 1
Query:   28 AAGGSQTAFTYSSEPQAVPSKRSTVRSKYREDAATVPDAAQWIDENDLLASNNIMYDRRVVRGNTYAAQVVTQSAQRESLRLRQEHE-RRMRLEALRRRQAAEFSNMPRTPPPVQGRMHMDAQTEEFLEELTDRPVETSIETQTEAFMDRPSSPLFVPAKSGVDADTQVVVGELFDFDLEVEPILEVLVGKTLELSVLELMEASGEEELAVIRRRQATFARERDAEMAEVQRMEAEAKRKSAEKMRRMKQQQEVKKAREALLEKVAARSFAKNYLSNLKTDVFDDLEDEGHFYDPLSKEVKEVFLPWLMGDMVRKVDKAVESMAVVDGLLSGA 1023
            AAGGS   + ++  P AVP KR+     YRE    +PDA           S NIM+D RVVRGNTYAA V+  SAQ E  R+  E E RR R+EA RR +      MPRTP PV GR H+D QTE +LEEL+DR  E    TQTEAFMDRP SPLF+P K+G DA TQ+  GELFDFDLEVEPILEVLVGKTLE S++E++E   EEEL  IRR Q  F + R+AE+AEVQR+EA                     A   L EKVAAR FA NY++NL+  VF +L +EGHF+DPL+ EV+E F+PWL+  + +++D    +  + + L++ A
Sbjct:    2 AAGGS-VGYEFAQPPAAVPHKRAP----YRE---PLPDA-----------SMNIMHDPRVVRGNTYAAHVLPPSAQAEQERVAGEMEARRRRMEATRRGKEVA---MPRTPEPVDGRRHVDIQTENYLEELSDRVPEVDDSTQTEAFMDRPPSPLFIPTKTGTDAQTQIEAGELFDFDLEVEPILEVLVGKTLEQSMMEVLE---EEELEAIRRHQEEFEQIRNAELAEVQRLEAXXXXXXXXXXXXXXXXXXXVAAEAELREKVAARGFAANYVANLQRSVFGELVEEGHFFDPLTAEVEEKFMPWLLSAVDKELDARARAETITESLIASA 309          
BLAST of mRNA_Ecto-sp6_S_contig10.417.1 vs. uniprot
Match: A0A7S1UL06_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UL06_9STRA)

HSP 1 Score: 246 bits (627), Expect = 1.530e-74
Identity = 167/351 (47.58%), Postives = 226/351 (64.39%), Query Frame = 1
Query:   49 AFTYSSEPQAVPSKRSTVRSKYREDAATVPDAAQWIDENDLLASNNIMYDRRVVRGNTYAAQVVTQSAQRESLRLRQEHERRMRLEALRRRQAAEFSNMPRTPPPVQGRMHMDAQTEEFLEELTDRPVETSIETQTEAFMDRPSSPLFVPAKSGVDADTQVVVGELFDFDLEVEPILEVLVGKTLELSVLELMEASGEEELAVIRRRQATFARERDAEMAEVQRMEAEAKRKSAEKMRRMKQQQEVKKAREALLEKVAARSFAKNYLSNLKTDVFDDLEDEGHFYDPLSKEVKEVFLPWLMGDMVRKVDKAVESMAVVDGLLS---GATEHASRIHREAV-EAKEAERARI 1089
            AFT++SEPQ VP KR   R KYRED++           +DL ++NNIM+DRRVVRGNTYAAQV+TQ+ QRE  RLR+                      P TPPPV GR+HMD QTEE++E L DR  E    TQT+A MD+P   LFVP KSGVD +TQ++ G+LFDFD EV P+LEVLV KTLE S++E+ME   E EL  IR +QA F  ER+AE+AEVQR+EA  +R++ EK RR++Q++  +    A+ EKV +R  A+ Y+++L+  VFD +   G F+DPL +EV+  FLPWL+ + + +VDK   +  +   LL    G  +  +R  R+ + EA+ A+ ARI
Sbjct:    3 AFTHASEPQPVPLKRQ--RPKYREDSS-----------DDLSSTNNIMFDRRVVRGNTYAAQVITQAQQREIERLREXXXXXXXXXXX--XXXXXXXXXPSTPPPVPGRVHMDIQTEEYVERLADRADELDAATQTDAGMDKPIPVLFVPKKSGVDKETQILDGDLFDFDFEVAPVLEVLVVKTLENSMMEIME---EAELEAIREQQAAFEMERNAELAEVQRLEAAVQRRADEKHRRIEQKKAKQAELVAMKEKVESRGIAQGYMADLQDRVFDTMGGMGLFFDPLVREVETSFLPWLLDETMGRVDKLHLAQDLAKSLLQESMGKAKKEARAFRKGIAEAEAAKAARI 335          
BLAST of mRNA_Ecto-sp6_S_contig10.417.1 vs. uniprot
Match: A0A812MIA0_9DINO (RSP3 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812MIA0_9DINO)

HSP 1 Score: 241 bits (616), Expect = 1.270e-72
Identity = 168/346 (48.55%), Postives = 218/346 (63.01%), Query Frame = 1
Query:   52 FTYSSEPQAVPSKRSTVRSKYREDAATVPDAAQWIDEN--DLLASNNIMYDRRVVRGNTYAAQVVTQSAQRESLRLRQEHERRMRLEALRRRQAAEFSNMPRTPPPVQGRMHMDAQTEEFLEELTDRPVETSIETQTEAFMDRPSSPLFVPAKSGVDADTQVVVGELFDFDLEVEPILEVLVGKTLELSVLELMEASGEEELAVIRRRQATFARERDAEMAEVQRMEAEAKRKSAEKMRRMKQQQEVKKAREALLEKVAARSFAKNYLSNLKTDVFDDLEDEGHFYDPLSKEVKEVFLPWLM-GDMVRKVDKAVESMAVVDGLLSGATEHASRI--HREAVEAKEA 1074
            +TY+ +P AVP KR                 A++ D N  +L  S+NIM+D+RV RGNTYA+QV+  SAQ E+ R+  + E   R  A  RR+ A     PRTPP V GR H D QTE +LEEL+D P   +  TQT+A  DRP SPLFVPAKSGVDA TQ+  GELFDFDLEVEPILEVLVGKTLE  ++E++E   EEELA +R  Q  F + R AE+AEVQR+EAEA R+  E+ RR  Q+    K   A+  KVAA ++A+ YL++++T VF  L  E  F DPL+K V+E FLP ++ G M R   +A  + AV   L +  TE   ++  HR AV A++A
Sbjct:   16 YTYTQQPSAVPHKR-----------------ARYRDPNVVELAKSSNIMWDKRVFRGNTYASQVMPPSAQAEAERIAADMEATTRRRAAARRKRAADMARPRTPPAVAGRQHADIQTETYLEELSDAPPMETAGTQTDALQDRPPSPLFVPAKSGVDAATQIKAGELFDFDLEVEPILEVLVGKTLEQGLMEVLE---EEELAALRAHQEEFEQIRAAELAEVQRLEAEAVRRDEERKRRAAQEIARVKREAAVKAKVAATAYARRYLNSVRTAVFSKLLMECAFTDPLAKAVEEDFLPGVLDGAMARLAQRATATQAVDSVLAAALTEQRKQLADHRAAVAAEKA 341          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.417.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G937_ECTSI1.510e-21899.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2C2M4_9STRA3.340e-10256.57Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A836CGH7_9STRA7.760e-9867.98Radial spoke 3 n=1 Tax=Tribonema minus TaxID=30337... [more]
A0A7S2GZH4_9STRA3.010e-8951.79Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6H5JGL2_9PHAE3.170e-8796.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F0YLW3_AURAN4.970e-8252.13Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S3ZX10_9STRA8.990e-8050.32Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S1CEJ9_9STRA2.030e-7550.45Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S1UL06_9STRA1.530e-7447.58Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A812MIA0_9DINO1.270e-7248.55RSP3 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:54639..59314 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score624.0
Seed ortholog evalue5e-176
Seed eggNOG ortholog2880.D7G937
Preferred nameRSPH3
Model size1239
Hectar predicted targeting categoryother localisation
GOsGO:0001534,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005875,GO:0005929,GO:0005930,GO:0007017,GO:0008017,GO:0008092,GO:0008150,GO:0009987,GO:0015630,GO:0015631,GO:0032838,GO:0032879,GO:0032991,GO:0040012,GO:0040017,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044447,GO:0044463,GO:0044464,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051270,GO:0051272,GO:0065007,GO:0097014,GO:0099568,GO:0120025,GO:0120038,GO:1902019,GO:2000145,GO:2000147,GO:2000155
Exons10
EggNOG free text desc.Radial spoke protein 3
EggNOG OGs2CMM4@1,2QQSZ@2759
Ec32 ortholog descriptionRadial spoke 3
Ec32 orthologEc-15_001990.1
Cds size1239
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.417.1prot_Ecto-sp6_S_contig10.417.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig10 54639..59314 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348694.533781-CDS-Ecto-sp6_S_contig10:54638..547851682348694.533781-CDS-Ecto-sp6_S_contig10:54638..54785Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 54639..54785 -
1682348694.545773-CDS-Ecto-sp6_S_contig10:54924..550101682348694.545773-CDS-Ecto-sp6_S_contig10:54924..55010Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 54925..55010 -
1682348694.5562692-CDS-Ecto-sp6_S_contig10:55244..553831682348694.5562692-CDS-Ecto-sp6_S_contig10:55244..55383Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 55245..55383 -
1682348694.56727-CDS-Ecto-sp6_S_contig10:55865..559771682348694.56727-CDS-Ecto-sp6_S_contig10:55865..55977Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 55866..55977 -
1682348694.583801-CDS-Ecto-sp6_S_contig10:56443..565591682348694.583801-CDS-Ecto-sp6_S_contig10:56443..56559Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 56444..56559 -
1682348694.5936153-CDS-Ecto-sp6_S_contig10:56933..570081682348694.5936153-CDS-Ecto-sp6_S_contig10:56933..57008Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 56934..57008 -
1682348694.6022432-CDS-Ecto-sp6_S_contig10:57382..575211682348694.6022432-CDS-Ecto-sp6_S_contig10:57382..57521Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 57383..57521 -
1682348694.6104004-CDS-Ecto-sp6_S_contig10:57695..577961682348694.6104004-CDS-Ecto-sp6_S_contig10:57695..57796Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 57696..57796 -
1682348694.6191816-CDS-Ecto-sp6_S_contig10:58327..584831682348694.6191816-CDS-Ecto-sp6_S_contig10:58327..58483Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 58328..58483 -
1682348694.6311805-CDS-Ecto-sp6_S_contig10:59146..593141682348694.6311805-CDS-Ecto-sp6_S_contig10:59146..59314Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 59147..59314 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig10.417.1

>prot_Ecto-sp6_S_contig10.417.1 ID=prot_Ecto-sp6_S_contig10.417.1|Name=mRNA_Ecto-sp6_S_contig10.417.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=413bp
MAMVAAPPAAAGGSQTAFTYSSEPQAVPSKRSTVRSKYREDAATVPDAAQ
WIDENDLLASNNIMYDRRVVRGNTYAAQVVTQSAQRESLRLRQEHERRMR
LEALRRRQAAEFSNMPRTPPPVQGRMHMDAQTEEFLEELTDRPVETSIET
QTEAFMDRPSSPLFVPAKSGVDADTQVVVGELFDFDLEVEPILEVLVGKT
LELSVLELMEASGEEELAVIRRRQATFARERDAEMAEVQRMEAEAKRKSA
EKMRRMKQQQEVKKAREALLEKVAARSFAKNYLSNLKTDVFDDLEDEGHF
YDPLSKEVKEVFLPWLMGDMVRKVDKAVESMAVVDGLLSGATEHASRIHR
EAVEAKEAERARIVAEALAEAEEARRKVEEEEAAIRAAQEALEREEAGEG
EDGEGGDPTPDE*
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mRNA from alignment at Ecto-sp6_S_contig10:54639..59314-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig10.417.1 ID=mRNA_Ecto-sp6_S_contig10.417.1|Name=mRNA_Ecto-sp6_S_contig10.417.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4676bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:54639..59314- (Ectocarpus species6 EcLAC_371)
ATGGCAATGGTGGCCGCGCCTCCGGCGGCAGCAGGGGGGTCCCAGACTGC CTTCACTTACTCCTCGGAGCCTCAGGCTGTACCATCAAAGCGTAGCACCG TTCGGTCCAAATACCGAGAAGATGCTGCTACAGTCCCTGATGCTGCCCAG TGGATAGACGAGAATGACGTGAGTGTACCTGAGGGAGGTCTAGGATAGAA GTGAAAAGGGAATGGCGGTTGTGATATGCTCTCGCCTGTACATAATTTCC TTGCCAAAAGTAGTGCAGACTATGCCCATACAGTAGTACAGACGATTGAA TTCGCAAGTAAACTACCCTAGATTACAATCGTCAAAAGATGTTGATTTTT GTGTGCAGTGAGGACCGAATGCGTATTGTCACTGCTGTTGTTGACTAGCA AGTGTTCACCTTCAACGGACATGGTTAGAATTGGATAATGACGTGCCTAC TGTATATCGACGACTTTCTCGAGCGGAAAATGTTACGTGTGTAATAATTA CGTAGTCAGACATCACTGACTGAGCATCTACACTTTGATTCAAAGTGCAG AGGTCGTGCACTGGACCTTGACCTCGATTCACTTATTACATACAGTATTA GAGACGGCAATTCTCATGATTCATCTATTCGTTCGACAAGCTCACAGGGG TCTCGACCAATAGACATGTGCAGCATTTTACCGTCCAACGTTGGATCGAG ACGGTCATTGACGGAAGGTGGCAGACGCGATGAAGCGCCGAGATCAGCAT CGCAACTTACAGATCGGGTCGCTCCTTCCCCTCCGGTACCACCCCCCTCC CCCCGTCCCCCTCCTCTTGAACTATGTGCAGCTGCTCGCGTCGAACAACA TCATGTACGACCGCAGAGTCGTGAGGGGCAACACGTACGCGGCACAGGTG GTAACCCAGAGCGCTCAGCGAGAGTCGCTCCGACTTAGGCAAGAGCACGA GAGGAGGATGCGTTTAGAAGCGCTACGGCGCCGTCAGGTGAAGCCAATGT ACCGATGGTTTCCCCCTGCCACAAAAACAAACAAACGTTTAGAGCTCCTA GCAGTTTGCAACAAGACACCCTTCTAACCCATGCATACCCTTGAAGAGAT GCTTCTTCACTAGTTCTTGTGATAACACCGTTCACCAGCTACGTTCAACA GAGTCCCCCCTCCTTTTTCTGGAGAGTGCAATAATCTACTTGTGCAGTAG GCCCACTGTAAGACACTTCAGTTTCGGGTCGAGGTGTCGAGCATGGACTA TCGCACACTGTCTAGGATCCACCCCTGTGATGTGTTTCTTCACCCCAATT TTTTTCTTTCGGGATAATTTGAGCCTGCTATCATCACATTTAAATTGCGG GTCGGTCCGATATCGCCGTCGTCATGCTTGTGACACGAACAACCCCAGAA CCAGTCTGCTCTGCGGCATATTGAAACAACTGCAGCACCATTGCCGGGGT GTGCACGATACCGGGTTGTAGATAACCTCCCTCTAACAGCTGTGGCGGGT TTCTCTCCAAAACTTCAGGCTGCGGAGTTCTCGAACATGCCGCGGACCCC CCCGCCGGTGCAAGGGCGCATGCATATGGACGCCCAGACAGAAGAGTTTC TCGAAGAGCTAACGGACAGGTGACAGGAGGCTTAGCAGTACGAAAAGGGG GGCCTTTTTGCTAATAACGACCAACCTAGGTTCATTGCAATGCTTACTCT TGAATCTGATTTATTGGCGCCCGCACCTTTTTGGGGGCAACCAAAACAAA CAGTAGCAATACCAAACAACAACTCAATCGATCATGCCGACAGGCCAGTG GAGACATCAATTGAAACTCAAACGGAGGCTTTTATGGATCGCCCTTCGTC TCCCCTGTTCGTGCCGGCGAAGAGCGGGGTGGATGCCGACACTCAAGTCG TTGTCGGCGAGCTGTTCGACTTCGATCTAGAGGTATTGAATGCTAACGCA TATTCCCTCGTGTCTGAGAGCCGTGCTTTCCCCGTACGGGCATGGTTTAT GCCCTCATCGGCGTGTATCAACTGTCCCAATGGTCCCAAGCGTGCGAACA CTGCGTTCGTGAAACCCTTCGGGAGCGAGCAAACCCTCCTTGTCAACACA GTGTCGTAAGTTTGTTGTCAGCGGCTTGGTTTCTAAGTCATCATTTAAGC GAGAGAGTCGAGGAATCGTTTGTTTGTGTCAAGTTCATGTCCACATTGTT TCCTTTCTACGTTGTTTCGTTCCGACCCATCTTGCTGCCCGTCTCTCGCT TGATTCTGCCATACGTTCTTCATCAAAACGTCCTCTCGATGTCTTTTTCG TTTCAGGTGGAGCCAATTCTGGAGGTATTAGTAGGGAAAACCCTCGAGCT AAGCGTCCTCGAGCTCATGGAGGCAAGTGGGGTCGTTTTTTTTCTTACCG GTGGTGAATTGTAGAGCTCTCTTGCTAAACTTCTTCGGCGCCAGCGGTGG TTGTTGGGTAAGCTCACCATACGACGCCGAACAAGCGAGGGTGATGGTGG GTTGTCTGAACGACAAGATATTTTCAGTGGTGAGGCGTGTCTCGCGTGCA AGTATTGATCATTTACGTTGTCTATGTGGTAGTCACAAAAATGACATGGT GTAGAACTGCACAAGCAATTTACTCTCTCAGACGACTTCTCTTCGTCGAT AACTACTGCTCGTACGAACGAAAGGTAGGTCAGTGTGTGTTGCGTCTGGT TCAATTGTCCGTTGTCATATGTTTTCCTGTTTCGTGCACTTGATTGATAC CGCAGGAGGAAGAGCTGGCCGTTATCCGAAGACGGCAGGCAACATTTGCC CGCGAGAGGGACGCGGAGATGGCGGAGGTGCAGCGCATGGAGGCCGAGGC GAAGAGAAAGTCTGCAGAAAAGTGAGCGACCCACCGCCAGAGTACCTGTA GCGTGCTGTTGTCTTGATGTCTATTCCTGAAGGAATATGTACCTGGTGGA GACTTATGCCGAGAGATCACCCATGAAGACCCCAATAGTGAGGTCTACAC CTACAGAGGCGCTACAAAAGCAGGATATTCGTGGGTGGCTTGTTGCAGTG GATACATCATTGAATAGTCTCAAATTGTCCTTCTGCAGCCTGTGCGCGCT TGAAACGCTCGGATTATCCCTTGCTCCCGGAAACCTTGGTCATAAAACAA AGGCAGGTAAAATATATATATATCAAAGTTCCGCCTGACAACGCGCTAGT CTACGTGCTTTGACAGAGAATGAGGCGGTAGGGTCATGGGTAGCCAGCAA TATTGTGATCGCTTTCTGAACATCTAGGGGTGAACCATTGGAAAAAATAA AACACAAAATAAAACACTACCTACCGTGTTTGCACAGGATGCGACGCATG AAGCAGCAGCAGGAGGTTAAGAAGGCACGAGAGGCCTTACTCGAGAAGGT GGCCGCCCGCAGCTTCGCCAAGAACTACCTCTCCAATTTGAAGACCGATG TAAGTGCCACCCATTGATCAACCAGACTCCAACCCTTTTCTTCGTAGCAG GACTAATTTCCAAGGCGTTTTCTTTCCTTGGTAAAGGCGACAACAAGAAA CATGTTTCTTGGTGAGAACGCATGTGCAGTACGTGTTGCGAAAGAAGCCA TGATAACCCACTGTCCGTGTTCCACGAGAAATTCAATCTCAGTTGTCGGA TGAACAGATTGACGTGTGCACTATCCCAATGCACGTTCAAACGATCGTGC GGATGCCTCTAAAGCGGGTGTTTACGACGAACATCGTTCGTAACCGGGCA AAGACAAACTACGCTTTATCTAGCTTCAAAACCACAGGCATCCACGCCAG AAGATGACGTCTATAGCAAGACCGTCACCGCTCATGAAATACGAGGACAT CAATCAATCAATGTCATTTTTTTCCCGCCTGCACGCTCGAGAGCACTAAT TGTGACGATGGCTTCCCTTACTGAATCCTAGGTGTTCGACGACCTCGAGG ACGAGGGTCACTTCTACGATCCGCTCTCGAAGGAGGTCAAGGAGGTGTTT TTGCCGTGGCTGATGGGTGATATGGTGCGGAAGGTCGACAAGGCGGTGGA GAGTATGGCAGTCGTTGACGGTGAGAGTATACTTATCGAAGAGGCCTAGA CAAGCCGAAGACGTTGGTCGTGCTAATACTGTAGACGTATAATTCGGGGC AATATTATTGGACACTTTTGATCGTACTCATGTATGCTTCCGCCACAGGC ACGTAGTTTGTTGTCGTCTGCCGTCTACACTCTGTGACAAAATCCGGCTT TTCTCCTGGTTGACGCCCCTGTTCATCAACCTACCCGCGTCCGTCAATGC TCAGGGCTCTTATCTGGGGCTACTGAGCATGCTAGCAGGATCCACAGAGA GGCGGTGGAAGCGAAGGAGGCGGAGAGAGCCAGGATAGTGGTAAGCTGGA AGGCATTCCCAATTCGTGATTTCTCACGAATAATGTACACCCCCGCCCCC CCCCGTGTCGCTGGTGTCCAGTTTCTAACCCATGCACAACTCACTCGCCT CACTTCGACGATAACGGTTCCAAAAATAGGCTGAAGCGTTGGCGGAGGCG GAGGAGGCCCGACGGAAGGTGGAGGAAGAAGAGGCTGCGATTAGGGCCGC ACAGGAAGCCTTGGAGAGGGAGGAGGCAGGGGAGGGCGAGGACGGGGAAG GCGGCGACCCTACCCCCGACGAGTAG
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig10:54639..59314-

>mRNA_Ecto-sp6_S_contig10.417.1 ID=mRNA_Ecto-sp6_S_contig10.417.1|Name=mRNA_Ecto-sp6_S_contig10.417.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1239bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:54639..59314- (Ectocarpus species6 EcLAC_371)
ATGGCAATGGTGGCCGCGCCTCCGGCGGCAGCAGGGGGGTCCCAGACTGC
CTTCACTTACTCCTCGGAGCCTCAGGCTGTACCATCAAAGCGTAGCACCG
TTCGGTCCAAATACCGAGAAGATGCTGCTACAGTCCCTGATGCTGCCCAG
TGGATAGACGAGAATGACCTGCTCGCGTCGAACAACATCATGTACGACCG
CAGAGTCGTGAGGGGCAACACGTACGCGGCACAGGTGGTAACCCAGAGCG
CTCAGCGAGAGTCGCTCCGACTTAGGCAAGAGCACGAGAGGAGGATGCGT
TTAGAAGCGCTACGGCGCCGTCAGGCTGCGGAGTTCTCGAACATGCCGCG
GACCCCCCCGCCGGTGCAAGGGCGCATGCATATGGACGCCCAGACAGAAG
AGTTTCTCGAAGAGCTAACGGACAGGCCAGTGGAGACATCAATTGAAACT
CAAACGGAGGCTTTTATGGATCGCCCTTCGTCTCCCCTGTTCGTGCCGGC
GAAGAGCGGGGTGGATGCCGACACTCAAGTCGTTGTCGGCGAGCTGTTCG
ACTTCGATCTAGAGGTGGAGCCAATTCTGGAGGTATTAGTAGGGAAAACC
CTCGAGCTAAGCGTCCTCGAGCTCATGGAGGCAAGTGGGGAGGAAGAGCT
GGCCGTTATCCGAAGACGGCAGGCAACATTTGCCCGCGAGAGGGACGCGG
AGATGGCGGAGGTGCAGCGCATGGAGGCCGAGGCGAAGAGAAAGTCTGCA
GAAAAGATGCGACGCATGAAGCAGCAGCAGGAGGTTAAGAAGGCACGAGA
GGCCTTACTCGAGAAGGTGGCCGCCCGCAGCTTCGCCAAGAACTACCTCT
CCAATTTGAAGACCGATGTGTTCGACGACCTCGAGGACGAGGGTCACTTC
TACGATCCGCTCTCGAAGGAGGTCAAGGAGGTGTTTTTGCCGTGGCTGAT
GGGTGATATGGTGCGGAAGGTCGACAAGGCGGTGGAGAGTATGGCAGTCG
TTGACGGGCTCTTATCTGGGGCTACTGAGCATGCTAGCAGGATCCACAGA
GAGGCGGTGGAAGCGAAGGAGGCGGAGAGAGCCAGGATAGTGGCTGAAGC
GTTGGCGGAGGCGGAGGAGGCCCGACGGAAGGTGGAGGAAGAAGAGGCTG
CGATTAGGGCCGCACAGGAAGCCTTGGAGAGGGAGGAGGCAGGGGAGGGC
GAGGACGGGGAAGGCGGCGACCCTACCCCCGACGAGTAG
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