mRNA_Ecto-sp13_S_contig17004.4996.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17004.4996.1 vs. uniprot
Match: D7G5X8_ECTSI (Heat shock protein 70 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5X8_ECTSI) HSP 1 Score: 282 bits (721), Expect = 1.810e-91 Identity = 151/161 (93.79%), Postives = 152/161 (94.41%), Query Frame = 1
Query: 1 AFLGTKVKHAVITVPAYFNDAQRQATKDAGTIAGLQARITYTSVINEPTAAAIAYGLDREGIEENILVFDLGGGTFDVTLLAIDNGVFEVRATSGNTHLGGEDFDQRIMKYCISQQFKRTNGVDVSEDKRAVQRLRRQCELAKRTLSSQTQATITVEALHD 483
AFLGTKVKHAVITVPAYFNDAQRQATKDAGTIAGLQ VINEPTAAAIAYGLDREGIEENILVFDLGGGTFDVTLLAIDNGVFEVRATSGNTHLGGEDFDQRIMKYCISQ FKRTNGVDVS +KRAVQRLRRQCELAKRTLSSQTQATITVEALHD
Sbjct: 2 AFLGTKVKHAVITVPAYFNDAQRQATKDAGTIAGLQVE----RVINEPTAAAIAYGLDREGIEENILVFDLGGGTFDVTLLAIDNGVFEVRATSGNTHLGGEDFDQRIMKYCISQ-FKRTNGVDVSGNKRAVQRLRRQCELAKRTLSSQTQATITVEALHD 157
BLAST of mRNA_Ecto-sp13_S_contig17004.4996.1 vs. uniprot
Match: A0A7S2V0Q5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0Q5_9STRA) HSP 1 Score: 231 bits (590), Expect = 4.180e-75 Identity = 120/159 (75.47%), Postives = 138/159 (86.79%), Query Frame = 1
Query: 4 FLGTKVKHAVITVPAYFNDAQRQATKDAGTIAGLQARITYTSVINEPTAAAIAYGLDREGIEENILVFDLGGGTFDVTLLAIDNGVFEVRATSGNTHLGGEDFDQRIMKYCISQQFKRTNGVDVSEDKRAVQRLRRQCELAKRTLSSQTQATITVEALH 480
FLG +V HAVITVPAYFNDAQRQATKDAGTIAGL+ VINEPTAAAIAYGLDR+G EE +LVFDLGGGTFDVTLL+IDNGVFEVRATSG+THLGGEDFDQR+M Y +S FKR G+D S+D+RA+QR+RRQCE+AKR LS+QTQ T+ +EAL+
Sbjct: 2 FLGKEVNHAVITVPAYFNDAQRQATKDAGTIAGLKVE----RVINEPTAAAIAYGLDRKGKEEQVLVFDLGGGTFDVTLLSIDNGVFEVRATSGDTHLGGEDFDQRLMDYLLSV-FKRKTGLDASKDQRALQRVRRQCEMAKRALSTQTQTTVDIEALY 155
BLAST of mRNA_Ecto-sp13_S_contig17004.4996.1 vs. uniprot
Match: A0A8J9TAQ6_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TAQ6_PHATR) HSP 1 Score: 239 bits (611), Expect = 7.250e-75 Identity = 123/157 (78.34%), Postives = 140/157 (89.17%), Query Frame = 1
Query: 4 FLGTKVKHAVITVPAYFNDAQRQATKDAGTIAGLQARITYTSVINEPTAAAIAYGLDREGIEENILVFDLGGGTFDVTLLAIDNGVFEVRATSGNTHLGGEDFDQRIMKYCISQQFKRTNGVDVSEDKRAVQRLRRQCELAKRTLSSQTQATITVEA 474
FLG +VKHAV+TVPAYFNDAQRQATKDAGTIAGL VINEPTAAAIAYGLD++ +EEN+LVFDLGGGTFDVTLL+ID+GVFEVRATSGNTHLGGEDFDQR+M+YC+S FKR +G+DVS DKRA+QRLR+QCELAKRTLS+QT ATI +A
Sbjct: 225 FLGCEVKHAVVTVPAYFNDAQRQATKDAGTIAGLM----IERVINEPTAAAIAYGLDKQDVEENVLVFDLGGGTFDVTLLSIDHGVFEVRATSGNTHLGGEDFDQRLMEYCMSV-FKRQSGIDVSGDKRAIQRLRKQCELAKRTLSTQTSATIDCDA 376
BLAST of mRNA_Ecto-sp13_S_contig17004.4996.1 vs. uniprot
Match: A0A1Z5K3Y6_FISSO (Heat shock 70kDa protein 5 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K3Y6_FISSO) HSP 1 Score: 243 bits (619), Expect = 7.950e-74 Identity = 126/158 (79.75%), Postives = 142/158 (89.87%), Query Frame = 1
Query: 4 FLGTKVKHAVITVPAYFNDAQRQATKDAGTIAGLQARITYTSVINEPTAAAIAYGLDREGIEENILVFDLGGGTFDVTLLAIDNGVFEVRATSGNTHLGGEDFDQRIMKYCISQQFKRTNGVDVSEDKRAVQRLRRQCELAKRTLSSQTQATITVEAL 477
+LG +VKHAV+TVPAYFNDAQRQATKDAG IAGLQ VINEPTAAAIAYGLD++ EENILVFDLGGGTFDVTLL+ID+GVFEVRATSGNTHLGGEDFDQR+M+YCISQ FKR +G+DVS+DKRAVQRLR+QCE+AKRTLS+QT ATI +AL
Sbjct: 181 YLGCEVKHAVVTVPAYFNDAQRQATKDAGKIAGLQ----IDRVINEPTAAAIAYGLDKQDREENILVFDLGGGTFDVTLLSIDHGVFEVRATSGNTHLGGEDFDQRLMEYCISQ-FKRQSGIDVSDDKRAVQRLRKQCEMAKRTLSTQTSATIDCDAL 333
BLAST of mRNA_Ecto-sp13_S_contig17004.4996.1 vs. uniprot
Match: A0A7S0C9U7_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C9U7_9STRA) HSP 1 Score: 238 bits (606), Expect = 1.020e-72 Identity = 123/159 (77.36%), Postives = 140/159 (88.05%), Query Frame = 1
Query: 1 AFLGTKVKHAVITVPAYFNDAQRQATKDAGTIAGLQARITYTSVINEPTAAAIAYGLDREGIEENILVFDLGGGTFDVTLLAIDNGVFEVRATSGNTHLGGEDFDQRIMKYCISQQFKRTNGVDVSEDKRAVQRLRRQCELAKRTLSSQTQATITVEAL 477
+FLG +V HAV+TVPAYFNDAQRQATKDAGTIAGL+ VINEPTAAAIAYGLD++ +EENILVFDLGGGTFDVTLL+ID+GVFEVRATSGNTHLGGEDFDQR+M YCISQ FKR +G+D++ DKRA+ RLR+QCE AKRTLSSQT AT+ EAL
Sbjct: 83 SFLGCEVNHAVVTVPAYFNDAQRQATKDAGTIAGLKVE----RVINEPTAAAIAYGLDKQDVEENILVFDLGGGTFDVTLLSIDHGVFEVRATSGNTHLGGEDFDQRMMDYCISQ-FKRKSGIDIAGDKRALTRLRKQCENAKRTLSSQTSATVDCEAL 236
BLAST of mRNA_Ecto-sp13_S_contig17004.4996.1 vs. uniprot
Match: B7G3Y2_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G3Y2_PHATC) HSP 1 Score: 240 bits (612), Expect = 1.800e-72 Identity = 123/157 (78.34%), Postives = 141/157 (89.81%), Query Frame = 1
Query: 4 FLGTKVKHAVITVPAYFNDAQRQATKDAGTIAGLQARITYTSVINEPTAAAIAYGLDREGIEENILVFDLGGGTFDVTLLAIDNGVFEVRATSGNTHLGGEDFDQRIMKYCISQQFKRTNGVDVSEDKRAVQRLRRQCELAKRTLSSQTQATITVEA 474
FLG +VKHAV+TVPAYFNDAQRQATKDAGTIAGL+ VINEPTAAAIAYGLD++ +EEN+LVFDLGGGTFDVTLL+ID+GVFEVRATSGNTHLGGEDFDQR+M+YC+S FKR +G+DVS DKRA+QRLR+QCELAKRTLS+QT ATI +A
Sbjct: 225 FLGCEVKHAVVTVPAYFNDAQRQATKDAGTIAGLK----IERVINEPTAAAIAYGLDKQDVEENVLVFDLGGGTFDVTLLSIDHGVFEVRATSGNTHLGGEDFDQRLMEYCMSV-FKRQSGIDVSGDKRAIQRLRKQCELAKRTLSTQTSATIDCDA 376
BLAST of mRNA_Ecto-sp13_S_contig17004.4996.1 vs. uniprot
Match: A0A6T9ZQ49_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A6T9ZQ49_9STRA) HSP 1 Score: 239 bits (611), Expect = 1.990e-72 Identity = 125/159 (78.62%), Postives = 139/159 (87.42%), Query Frame = 1
Query: 1 AFLGTKVKHAVITVPAYFNDAQRQATKDAGTIAGLQARITYTSVINEPTAAAIAYGLDREGIEENILVFDLGGGTFDVTLLAIDNGVFEVRATSGNTHLGGEDFDQRIMKYCISQQFKRTNGVDVSEDKRAVQRLRRQCELAKRTLSSQTQATITVEAL 477
A+LG +VKHAV+TVPAYFNDAQRQATKDAGTIAGL T VINEPTAAAIAYGLD++ EENILVFDLGGGTFDVTLL+IDNGVFEV ATSGNTHLGGEDFDQR+M+YC+SQ FKR G+D+ +DKRAVQRLR+QCE AKRTLS+QT TI EAL
Sbjct: 211 AYLGMEVKHAVVTVPAYFNDAQRQATKDAGTIAGL----TVERVINEPTAAAIAYGLDKQDQEENILVFDLGGGTFDVTLLSIDNGVFEVLATSGNTHLGGEDFDQRLMEYCMSQ-FKRKTGIDIHDDKRAVQRLRKQCENAKRTLSTQTSTTIDCEAL 364
BLAST of mRNA_Ecto-sp13_S_contig17004.4996.1 vs. uniprot
Match: A0A835ZDU3_9STRA (Heat shock protein 70 family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDU3_9STRA) HSP 1 Score: 238 bits (608), Expect = 5.460e-72 Identity = 123/160 (76.88%), Postives = 138/160 (86.25%), Query Frame = 1
Query: 1 AFLGTKVKHAVITVPAYFNDAQRQATKDAGTIAGLQARITYTSVINEPTAAAIAYGLDREGIEENILVFDLGGGTFDVTLLAIDNGVFEVRATSGNTHLGGEDFDQRIMKYCISQQFKRTNGVDVSEDKRAVQRLRRQCELAKRTLSSQTQATITVEALH 480
AF+GT V+HAV+TVPAYFNDAQRQATKDAGTIAGL T VINEPTAAAIAYGLDR+G EEN+LVFDLGGGTFDVTLL IDNGVFEVRATSG+THLGGEDFDQR+M++CI ++ G DVS+DK+AVQRLR+ CE AKR LSS TQATI V+ALH
Sbjct: 208 AFIGTDVRHAVVTVPAYFNDAQRQATKDAGTIAGL----TVERVINEPTAAAIAYGLDRKGQEENVLVFDLGGGTFDVTLLTIDNGVFEVRATSGDTHLGGEDFDQRLMQHCIDAFKRKHGGADVSDDKKAVQRLRKACEAAKRALSSGTQATIEVDALH 363
BLAST of mRNA_Ecto-sp13_S_contig17004.4996.1 vs. uniprot
Match: A0A1E7EWB3_9STRA (Blo t Mag29 allergen n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EWB3_9STRA) HSP 1 Score: 237 bits (605), Expect = 2.090e-71 Identity = 124/159 (77.99%), Postives = 138/159 (86.79%), Query Frame = 1
Query: 1 AFLGTKVKHAVITVPAYFNDAQRQATKDAGTIAGLQARITYTSVINEPTAAAIAYGLDREGIEENILVFDLGGGTFDVTLLAIDNGVFEVRATSGNTHLGGEDFDQRIMKYCISQQFKRTNGVDVSEDKRAVQRLRRQCELAKRTLSSQTQATITVEAL 477
A+LG +VKHAV+TVPAYFNDAQRQATKDAGTIAGL T VINEPTAAAIAYGLD++ EENILVFDLGGGTFDVTLL+IDNGVFEV ATSGNTHLGGEDFDQR+M+YC+SQ FKR +G+D+ DKRAVQRLR+QCE AKRTLS+QT I EAL
Sbjct: 227 AYLGVEVKHAVVTVPAYFNDAQRQATKDAGTIAGL----TVERVINEPTAAAIAYGLDKQDREENILVFDLGGGTFDVTLLSIDNGVFEVLATSGNTHLGGEDFDQRLMEYCMSQ-FKRKSGIDIVNDKRAVQRLRKQCENAKRTLSTQTSTVIDCEAL 380
BLAST of mRNA_Ecto-sp13_S_contig17004.4996.1 vs. uniprot
Match: A0A7S3LFB6_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LFB6_9STRA) HSP 1 Score: 236 bits (602), Expect = 3.470e-71 Identity = 123/158 (77.85%), Postives = 138/158 (87.34%), Query Frame = 1
Query: 4 FLGTKVKHAVITVPAYFNDAQRQATKDAGTIAGLQARITYTSVINEPTAAAIAYGLDREGIEENILVFDLGGGTFDVTLLAIDNGVFEVRATSGNTHLGGEDFDQRIMKYCISQQFKRTNGVDVSEDKRAVQRLRRQCELAKRTLSSQTQATITVEAL 477
++G VK AV+TVPAYFNDAQRQATKDAG IAGL+ VINEPTAAAIAYGLD++ EE +LVFDLGGGTFDVTLL ID+GVFEVRATSGNTHLGGEDFDQR+M+YC+ QQFKR NG+D+SEDKRAVQRLR+QCELAKRTLS+QT ATI EAL
Sbjct: 202 YIGKSVKRAVVTVPAYFNDAQRQATKDAGKIAGLE----IERVINEPTAAAIAYGLDKQDQEETVLVFDLGGGTFDVTLLHIDHGVFEVRATSGNTHLGGEDFDQRLMEYCM-QQFKRQNGIDMSEDKRAVQRLRKQCELAKRTLSTQTTATIDAEAL 354 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17004.4996.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17004.4996.1 >prot_Ecto-sp13_S_contig17004.4996.1 ID=prot_Ecto-sp13_S_contig17004.4996.1|Name=mRNA_Ecto-sp13_S_contig17004.4996.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=161bp AFLGTKVKHAVITVPAYFNDAQRQATKDAGTIAGLQARITYTSVINEPTAback to top mRNA from alignment at Ecto-sp13_S_contig17004:1..3784- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17004.4996.1 ID=mRNA_Ecto-sp13_S_contig17004.4996.1|Name=mRNA_Ecto-sp13_S_contig17004.4996.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3784bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17004:1..3784- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17004:1..3784- >mRNA_Ecto-sp13_S_contig17004.4996.1 ID=mRNA_Ecto-sp13_S_contig17004.4996.1|Name=mRNA_Ecto-sp13_S_contig17004.4996.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=483bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17004:1..3784- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |