prot_Ecto-sp13_S_contig16947.4956.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16947.4956.1
Unique Nameprot_Ecto-sp13_S_contig16947.4956.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length131
Homology
BLAST of mRNA_Ecto-sp13_S_contig16947.4956.1 vs. uniprot
Match: D7FN81_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN81_ECTSI)

HSP 1 Score: 254 bits (650), Expect = 4.800e-76
Identity = 126/127 (99.21%), Postives = 126/127 (99.21%), Query Frame = 0
Query:    5 QVEKSRNKELRDLFQAGVGCHHAGMLRADRGLTERAFEDGAIKVLVCTATLAWGVNLPAHTVIIKGTEVYNPEKGGLQDLSMLDVLQVFGRAGRPQYDTSGEAIMITAHKSLDKYLALLAKQTPIES 131
            QVEKSRNKELRDLFQAGVGCHHAGMLRADRGLTERAFEDGAIKVLVCTATLAWGVNLPAHTVIIKGTEVYNPEKGGLQDLSMLDVLQVFGRAGRPQYDTSGEAIMIT HKSLDKYLALLAKQTPIES
Sbjct:  893 QVEKSRNKELRDLFQAGVGCHHAGMLRADRGLTERAFEDGAIKVLVCTATLAWGVNLPAHTVIIKGTEVYNPEKGGLQDLSMLDVLQVFGRAGRPQYDTSGEAIMITTHKSLDKYLALLAKQTPIES 1019          
BLAST of mRNA_Ecto-sp13_S_contig16947.4956.1 vs. uniprot
Match: A0A835Z6M6_9STRA (Sec63 Brl domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6M6_9STRA)

HSP 1 Score: 226 bits (576), Expect = 4.350e-66
Identity = 107/126 (84.92%), Postives = 119/126 (94.44%), Query Frame = 0
Query:    6 VEKSRNKELRDLFQAGVGCHHAGMLRADRGLTERAFEDGAIKVLVCTATLAWGVNLPAHTVIIKGTEVYNPEKGGLQDLSMLDVLQVFGRAGRPQYDTSGEAIMITAHKSLDKYLALLAKQTPIES 131
            V KSRN+ELR LF +GVGCHHAGMLR+DRGLTERAFEDG +++LVCTATLAWGVNLPAHTVIIKGTEVYNPEKGG +DLS+LDVLQ+FGRAGRPQYDTSGEAI+IT HKSLD+YLALLA+ TPIES
Sbjct:  132 VLKSRNRELRQLFASGVGCHHAGMLRSDRGLTERAFEDGGLRLLVCTATLAWGVNLPAHTVIIKGTEVYNPEKGGAEDLSILDVLQIFGRAGRPQYDTSGEAILITTHKSLDRYLALLARATPIES 257          
BLAST of mRNA_Ecto-sp13_S_contig16947.4956.1 vs. uniprot
Match: W7TU71_9STRA (Activating signal cointegrator 1 complex subunit 3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TU71_9STRA)

HSP 1 Score: 206 bits (523), Expect = 6.020e-59
Identity = 97/127 (76.38%), Postives = 112/127 (88.19%), Query Frame = 0
Query:    5 QVEKSRNKELRDLFQAGVGCHHAGMLRADRGLTERAFEDGAIKVLVCTATLAWGVNLPAHTVIIKGTEVYNPEKGGLQDLSMLDVLQVFGRAGRPQYDTSGEAIMITAHKSLDKYLALLAKQTPIES 131
            QV KSR+ +LR  F AG+G HHAGMLR DR LTER FE+GAI+VLVCTATLAWG+NLPAHTV+IKGTEVY+P+KGG  DLSMLDV+Q+FGRAGRPQYDTSGEA+MIT HK+L +YLALL +Q PIES
Sbjct:  811 QVSKSRSDDLRQHFDAGLGIHHAGMLRPDRSLTERMFENGAIRVLVCTATLAWGINLPAHTVLIKGTEVYSPDKGGFVDLSMLDVMQIFGRAGRPQYDTSGEAVMITTHKALPRYLALLTEQMPIES 937          
BLAST of mRNA_Ecto-sp13_S_contig16947.4956.1 vs. uniprot
Match: A0A7C8ZAS7_OPUST (RNA helicase (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8ZAS7_OPUST)

HSP 1 Score: 191 bits (484), Expect = 1.810e-58
Identity = 90/127 (70.87%), Postives = 105/127 (82.68%), Query Frame = 0
Query:    5 QVEKSRNKELRDLFQAGVGCHHAGMLRADRGLTERAFEDGAIKVLVCTATLAWGVNLPAHTVIIKGTEVYNPEKGGLQDLSMLDVLQVFGRAGRPQYDTSGEAIMITAHKSLDKYLALLAKQTPIES 131
            +V KSRNKEL  LF  G+G HHAGMLRADR LTER F DG +KVLVCTATLAWGVNLPAHTV+IKGT++Y+P+ GG +DL MLDV+Q+FGRAGRPQ+D SGE I+IT+H+ L  YL LL  Q PIES
Sbjct:   57 EVMKSRNKELVGLFDNGIGIHHAGMLRADRALTERLFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQIYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHEKLAHYLRLLTSQLPIES 183          
BLAST of mRNA_Ecto-sp13_S_contig16947.4956.1 vs. uniprot
Match: A0A812ZGA7_SYMMI (BRR2C protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812ZGA7_SYMMI)

HSP 1 Score: 191 bits (485), Expect = 1.310e-57
Identity = 90/127 (70.87%), Postives = 106/127 (83.46%), Query Frame = 0
Query:    5 QVEKSRNKELRDLFQAGVGCHHAGMLRADRGLTERAFEDGAIKVLVCTATLAWGVNLPAHTVIIKGTEVYNPEKGGLQDLSMLDVLQVFGRAGRPQYDTSGEAIMITAHKSLDKYLALLAKQTPIES 131
            QV+KSR++EL   F  G+GCHHAGMLR+DR LTE+ FE G IKVL CTATLAWGVNLP HTVIIKGTE+Y+PE+GG  DLS+LDV Q+FGRAGRPQYDT+G A+MIT H+SL+ YL +L  Q PIES
Sbjct:   63 QVDKSRSQELISHFYKGMGCHHAGMLRSDRTLTEQLFERGVIKVLCCTATLAWGVNLPGHTVIIKGTELYDPERGGYVDLSILDVFQIFGRAGRPQYDTTGHAVMITPHQSLNNYLGMLTHQAPIES 189          
BLAST of mRNA_Ecto-sp13_S_contig16947.4956.1 vs. uniprot
Match: A0A7S3ARM9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ARM9_9EUKA)

HSP 1 Score: 187 bits (476), Expect = 9.700e-56
Identity = 88/127 (69.29%), Postives = 104/127 (81.89%), Query Frame = 0
Query:    5 QVEKSRNKELRDLFQAGVGCHHAGMLRADRGLTERAFEDGAIKVLVCTATLAWGVNLPAHTVIIKGTEVYNPEKGGLQDLSMLDVLQVFGRAGRPQYDTSGEAIMITAHKSLDKYLALLAKQTPIES 131
            +V KSR+ E+++LF  G G HHAGMLRADR +TER F DG I +LVCTATLAWGVNLPAHTVIIKGT++YNPEKG   DL +LDV+Q+FGRAGRPQ+DTSGE I+ITAH  L  YL +L +Q PIES
Sbjct:   64 EVNKSRSGEVKELFAGGFGVHHAGMLRADRSMTERLFADGLINLLVCTATLAWGVNLPAHTVIIKGTQLYNPEKGAFVDLGVLDVMQIFGRAGRPQFDTSGEGIIITAHAKLAHYLQMLTQQLPIES 190          
BLAST of mRNA_Ecto-sp13_S_contig16947.4956.1 vs. uniprot
Match: A0A7S2ES15_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ES15_9STRA)

HSP 1 Score: 181 bits (459), Expect = 1.950e-55
Identity = 88/127 (69.29%), Postives = 101/127 (79.53%), Query Frame = 0
Query:    5 QVEKSRNKELRDLFQAGVGCHHAGMLRADRGLTERAFEDGAIKVLVCTATLAWGVNLPAHTVIIKGTEVYNPEKGGLQDLSMLDVLQVFGRAGRPQYDTSGEAIMITAHKSLDKYLALLAKQTPIES 131
            +  KSRNKEL + F  G+G HHAGMLR DR L+E+ F DGAIKVL CTATLAWG+NLPAHTV++KGTEVYNPEKGG  DLS+LDV Q+FG AG PQ+DTSGEA +IT+H SL  YL  L K  PIES
Sbjct:   68 RASKSRNKELTEHFYNGLGIHHAGMLRNDRKLSEQMFNDGAIKVLCCTATLAWGINLPAHTVVVKGTEVYNPEKGGAVDLSILDVQQIFGSAGCPQFDTSGEATLITSHDSLAPYLDKLIKAVPIES 194          
BLAST of mRNA_Ecto-sp13_S_contig16947.4956.1 vs. uniprot
Match: A0A059CZQ1_EUCGR (Uncharacterized protein n=4 Tax=Myrtoideae TaxID=1699513 RepID=A0A059CZQ1_EUCGR)

HSP 1 Score: 195 bits (496), Expect = 2.600e-55
Identity = 92/127 (72.44%), Postives = 107/127 (84.25%), Query Frame = 0
Query:    5 QVEKSRNKELRDLFQAGVGCHHAGMLRADRGLTERAFEDGAIKVLVCTATLAWGVNLPAHTVIIKGTEVYNPEKGGLQDLSMLDVLQVFGRAGRPQYDTSGEAIMITAHKSLDKYLALLAKQTPIES 131
            +V KSRNK+L  LF+AGVG HHAGMLRADRGLTER F DG +KVLVCTATLAWGVNLPAHTV+IKGT++Y+P+ GG +DL MLDV+Q+FGRAGRPQ+D SGE I+IT+H  L  YL LL  Q PIES
Sbjct:  728 EVHKSRNKDLVQLFEAGVGVHHAGMLRADRGLTERLFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWKDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLSYYLRLLTSQLPIES 854          
BLAST of mRNA_Ecto-sp13_S_contig16947.4956.1 vs. uniprot
Match: A0A2J6LME3_LACSA (Uncharacterized protein n=1 Tax=Lactuca sativa TaxID=4236 RepID=A0A2J6LME3_LACSA)

HSP 1 Score: 195 bits (495), Expect = 3.540e-55
Identity = 93/131 (70.99%), Postives = 108/131 (82.44%), Query Frame = 0
Query:    1 DVVFQVEKSRNKELRDLFQAGVGCHHAGMLRADRGLTERAFEDGAIKVLVCTATLAWGVNLPAHTVIIKGTEVYNPEKGGLQDLSMLDVLQVFGRAGRPQYDTSGEAIMITAHKSLDKYLALLAKQTPIES 131
            D + +V KSRNKEL  LF +GVG HHAGMLRADRGLTER F DG +KVLVCTATLAWGVNLPAHTV+IKGT++Y+P+ GG +DL MLDV+Q+FGRAGRPQ+D SGE I+IT+H  L  YL LL  Q PIES
Sbjct:  693 DKLMEVSKSRNKELVQLFGSGVGIHHAGMLRADRGLTERLFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYYLRLLTSQLPIES 823          
BLAST of mRNA_Ecto-sp13_S_contig16947.4956.1 vs. uniprot
Match: UPI000D626821 (DExH-box ATP-dependent RNA helicase DExH14 isoform X1 n=2 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=UPI000D626821)

HSP 1 Score: 194 bits (493), Expect = 6.590e-55
Identity = 93/130 (71.54%), Postives = 107/130 (82.31%), Query Frame = 0
Query:    2 VVFQVEKSRNKELRDLFQAGVGCHHAGMLRADRGLTERAFEDGAIKVLVCTATLAWGVNLPAHTVIIKGTEVYNPEKGGLQDLSMLDVLQVFGRAGRPQYDTSGEAIMITAHKSLDKYLALLAKQTPIES 131
            V  +V KSRNKEL  LF +GVG HHAGMLRADRGLTER F DG +KVLVCTATLAWGVNLPAHTV+IKGT++Y+P+ GG +DL MLDV+Q+FGRAGRPQ+D SGE I+IT+H  L  YL LL  Q PIES
Sbjct:  722 VKMEVSKSRNKELVQLFTSGVGIHHAGMLRADRGLTERLFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYYLRLLTSQLPIES 851          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16947.4956.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN81_ECTSI4.800e-7699.21Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z6M6_9STRA4.350e-6684.92Sec63 Brl domain-containing protein n=1 Tax=Tribon... [more]
W7TU71_9STRA6.020e-5976.38Activating signal cointegrator 1 complex subunit 3... [more]
A0A7C8ZAS7_OPUST1.810e-5870.87RNA helicase (Fragment) n=1 Tax=Opuntia streptacan... [more]
A0A812ZGA7_SYMMI1.310e-5770.87BRR2C protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A7S3ARM9_9EUKA9.700e-5669.29Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A7S2ES15_9STRA1.950e-5569.29Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A059CZQ1_EUCGR2.600e-5572.44Uncharacterized protein n=4 Tax=Myrtoideae TaxID=1... [more]
A0A2J6LME3_LACSA3.540e-5570.99Uncharacterized protein n=1 Tax=Lactuca sativa Tax... [more]
UPI000D6268216.590e-5571.54DExH-box ATP-dependent RNA helicase DExH14 isoform... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 8..100
e-value: 3.7E-17
score: 73.0
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 12..98
e-value: 2.3E-7
score: 31.2
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1..131
score: 10.524
NoneNo IPR availableGENE3D3.40.50.300coord: 6..123
e-value: 9.8E-54
score: 184.6
NoneNo IPR availablePANTHERPTHR12131ATP-DEPENDENT RNA AND DNA HELICASEcoord: 5..131
NoneNo IPR availablePANTHERPTHR12131:SF16ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 3coord: 5..131
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 7..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16947contigEcto-sp13_S_contig16947:1225..2773 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16947.4956.1mRNA_Ecto-sp13_S_contig16947.4956.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16947 1225..2773 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16947.4956.1 ID=prot_Ecto-sp13_S_contig16947.4956.1|Name=mRNA_Ecto-sp13_S_contig16947.4956.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=131bp
DVVFQVEKSRNKELRDLFQAGVGCHHAGMLRADRGLTERAFEDGAIKVLV
CTATLAWGVNLPAHTVIIKGTEVYNPEKGGLQDLSMLDVLQVFGRAGRPQ
YDTSGEAIMITAHKSLDKYLALLAKQTPIES
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase