mRNA_Ecto-sp13_S_contig16857.4901.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig16857.4901.1
Unique NamemRNA_Ecto-sp13_S_contig16857.4901.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig16857.4901.1 vs. uniprot
Match: D7FWL4_ECTSI (Asparaginase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWL4_ECTSI)

HSP 1 Score: 392 bits (1007), Expect = 1.010e-133
Identity = 200/215 (93.02%), Postives = 202/215 (93.95%), Query Frame = 1
Query:    1 QSTVLVINTGGTLGMRKEDNSGGLAPVPGYFTSQMLTMEELVSADDMPFFDIVEYADPLLDSSCFQPSDWARIAIDIGRAYHCYDGFVVCMGTDTMAYAASALSFMLENLGKTVVFTGSQIPLAEVYNDARRNVVVAMMIAGSQKIPEVCLFFCNKLLRANRAVKVDSLALTAYDSPNFPHLGDLGVKMRYRRDVALHPPRGPFRVHTNMDSRVV 645
            +STVLVINTGGTLGMRKED SGGLAPVPGYFTSQMLTMEELV ADDMPFFDIVEY DPLLDSSCF+PSDWARIAIDIGRAYHCYDGFVVCMGTDTMAYAASALSFMLENLGKT       IPLAEVYNDARRNVVVAMMIAGSQKIPEVCLFF NKLLRANRAVKVDSLALTAYDSPNF HLGDLGVKMRYRRDVAL PPRGPFRVHTNMDSRVV
Sbjct:   75 KSTVLVINTGGTLGMRKEDKSGGLAPVPGYFTSQMLTMEELVIADDMPFFDIVEY-DPLLDSSCFEPSDWARIAIDIGRAYHCYDGFVVCMGTDTMAYAASALSFMLENLGKT-------IPLAEVYNDARRNVVVAMMIAGSQKIPEVCLFFSNKLLRANRAVKVDSLALTAYDSPNFAHLGDLGVKMRYRRDVALPPPRGPFRVHTNMDSRVV 281          
BLAST of mRNA_Ecto-sp13_S_contig16857.4901.1 vs. uniprot
Match: A0A835Z9K3_9STRA (Asparaginase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9K3_9STRA)

HSP 1 Score: 233 bits (595), Expect = 9.020e-73
Identity = 118/200 (59.00%), Postives = 145/200 (72.50%), Query Frame = 1
Query:   49 KEDNSGGLAPVPGYFTSQMLTMEELVSADDMPFFDIVEYADPLLDSSCFQPSDWARIAIDIGRAYHCYDGFVVCMGTDTMAYAASALSFMLENLGKTVVFTGSQIPLAEVYNDARRNVVVAMMIAGSQKIPEVCLFFCNKLLRANRAVKVDSLALTAYDSPNFPHLGDLGVKMRYRRDVALHPPRGPFRVHTNMDSRVVS 648
            ++D++G LAP PG+FT ++  +EELV A+ MP FD+VEY+ PLLDSSCF P DW  +A DIG AY  Y GFVVCMGTDTMAYAASALSFMLENLGK VVFTGSQIP  E YNDARRN               VCLFF ++LLR NRA K+ +  L A++SPNFP L  L V ++YRR++AL  P  P R+HT+MDS +++
Sbjct:    2 QKDDTGSLAPKPGFFTERIFMLEELVRAE-MPTFDVVEYS-PLLDSSCFTPDDWKNVATDIGAAYDRYKGFVVCMGTDTMAYAASALSFMLENLGKPVVFTGSQIPFVEAYNDARRN---------------VCLFFSDRLLRGNRACKMHATGLQAFESPNFPPLATLDVHVQYRRELALPRPAAPLRLHTHMDSHIIA 184          
BLAST of mRNA_Ecto-sp13_S_contig16857.4901.1 vs. uniprot
Match: A0A482SE24_9ARCH (Asparaginase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SE24_9ARCH)

HSP 1 Score: 229 bits (584), Expect = 3.170e-72
Identity = 115/212 (54.25%), Postives = 152/212 (71.70%), Query Frame = 1
Query:   10 VLVINTGGTLGMRKEDNSGGLAPVPGYFTSQMLTMEELVSADDMPFFDIVEYADPLLDSSCFQPSDWARIAIDIGRAYHCYDGFVVCMGTDTMAYAASALSFMLENLGKTVVFTGSQIPLAEVYNDARRNVVVAMMIAGSQKIPEVCLFFCNKLLRANRAVKVDSLALTAYDSPNFPHLGDLGVKMRYRRDVALHPPRGPFRVHTNMDSRVV 645
            VL++ TGGT+GM  +++ G LAP  GY T Q+          +MP   + EY +PLLDSSC  PS+W +IA+DI   Y+ YDGFVV MGTDTMAYA+SALSFMLENLGK+V+FTGSQIP  +VYNDARRN++V+++ A +   PEVC+ F +KLLRANR VKV+S++  A++SPNFP L  LG  ++ R D+ L  P+ P  VH  +D+ VV
Sbjct:   12 VLMLYTGGTMGMMAKED-GSLAPKEGYLTEQIEAHMPEFQRPEMPLVKVKEY-NPLLDSSCMGPSEWTKIAVDIEENYNSYDGFVVIMGTDTMAYASSALSFMLENLGKSVIFTGSQIPFHDVYNDARRNLIVSIIFAANSNYPEVCICFNDKLLRANRTVKVNSMSFDAFNSPNFPPLATLGANIKERSDLVLPAPKEPLIVHKQLDAHVV 221          
BLAST of mRNA_Ecto-sp13_S_contig16857.4901.1 vs. uniprot
Match: A0A7S2WSI2_9STRA (Asparaginase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSI2_9STRA)

HSP 1 Score: 221 bits (564), Expect = 4.630e-68
Identity = 111/194 (57.22%), Postives = 140/194 (72.16%), Query Frame = 1
Query:   64 GGLAPVPGYFTSQMLTMEELVSADDMPFFDIVEYADPLLDSSCFQPSDWARIAIDIGRAYHCYDGFVVCMGTDTMAYAASALSFMLENLGKTVVFTGSQIPLAEVYNDARRNVVVAMMIAGSQKIPEVCLFFCNKLLRANRAVKVDSLALTAYDSPNFPHLGDLGVKMRYRRDVALHPPRGPFRVHTNMDSRVV 645
            G L PV G  + QM +M+EL S  +MP +DI+EY DPLLDS+   P DW RIA DI   Y  YDGFVV  GTDTMAYAASALSFMLENL K V+FTGSQIP  EVYNDAR+N++V+M+ A      EVC++F ++LLR NRA K++S  + A+DSPNFP L ++GV +  R D+A+  PRG FRVH  M++ +V
Sbjct:    7 GALVPVRGSVSKQMASMQELHSHPEMPNYDIIEY-DPLLDSADMSPEDWVRIAEDIETHYFQYDGFVVICGTDTMAYAASALSFMLENLAKPVIFTGSQIPFHEVYNDARKNLIVSMIFASRDDFLEVCVYFHDRLLRGNRASKINSFRVDAFDSPNFPRLAEVGVNITARFDLAMRLPRGSFRVHKEMNTNIV 199          
BLAST of mRNA_Ecto-sp13_S_contig16857.4901.1 vs. uniprot
Match: A0A2R5G1I7_9STRA (Asparaginase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G1I7_9STRA)

HSP 1 Score: 221 bits (564), Expect = 1.420e-67
Identity = 119/213 (55.87%), Postives = 148/213 (69.48%), Query Frame = 1
Query:   10 VLVINTGGTLGMRKEDNSGGLAPVPGYFTSQMLTMEELVSADDMPFFDIVEYADPLLDSSCFQPSDWARIAIDIGRAYHCYDGFVVCMGTDTMAYAASALSFMLENLGKTVVFTGSQIPLAEVYNDARRNVVVAMMIAGSQKIPEVCLFFCNKLLRANRAVKVDSLALTAYDSPNFPHLGDLGVKMRYRRDVALHPPRGPFRVHTNMDSRVVS 648
            VLV+  GGT+GM   D+ G L P PGY T ++ TM E+ +ADDMP  D+ EY D L+DSS    SDWA I  DI   Y  YDGFVV  GTDTMAY+ASALSFMLENLGK VV TGS IPL + Y+DARRN+++A+ IAG+  IPEVC+FF +KLLR NR+ K+D+ +L A+ SPNF  L  +GV ++Y     L PP+ PFR H  MD  V +
Sbjct:   39 VLVLYIGGTIGM-VADSLGSLKPCPGYLTKELTTMPEM-TADDMPNVDVKEY-DTLVDSSDMDASDWAAIVRDIEDNYFNYDGFVVLQGTDTMAYSASALSFMLENLGKPVVLTGSMIPLIKGYSDARRNLLMAIFIAGTSCIPEVCIFFFDKLLRGNRSKKLDTGSLDAFQSPNFGPLASVGVGIQYHESFHLDPPKKPFRTHKTMDRGVAA 248          
BLAST of mRNA_Ecto-sp13_S_contig16857.4901.1 vs. uniprot
Match: A0A7S3XTZ4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTZ4_HETAK)

HSP 1 Score: 218 bits (554), Expect = 3.430e-67
Identity = 113/187 (60.43%), Postives = 141/187 (75.40%), Query Frame = 1
Query:   10 VLVINTGGTLGMRKEDNSGGLAPVPGYFTSQMLTMEEL-VSADDMPFFDIVEYADPLLDSSCFQPSDWARIAIDIGRAYHCYDGFVVCMGTDTMAYAASALSFMLENLGKTVVFTGSQIPLAEVYNDARRNVVVAMMIAGSQKIPEVCLFFCNKLLRANRAVKVDSLALTAYDSPNFPHLGDLGVKM 567
            VLVI TGGT+GM K D +G LAP PG+FT  +  MEEL V ++ MP   I+E+ DP+LDSSC  P DW  IA  I   Y  YD FVVCMGTDTMAY ASALSFM +NLGKTV+FTG+QIPL++ YNDARRN++V++++AG ++I EVCLFF +KL+R  RA KV+S  L A+DSPNFP L  +GV +
Sbjct:  111 VLVIYTGGTIGM-KPDLNGSLAPSPGFFTEYLKNMEELQVGSNSMPKVSIMEF-DPILDSSCMGPEDWVHIAEVIEENYLQYDSFVVCMGTDTMAYTASALSFMFQNLGKTVIFTGAQIPLSKAYNDARRNLIVSLIMAGLKEINEVCLFFNDKLMRGCRASKVNSFGLDAFDSPNFPPLAQIGVNI 295          
BLAST of mRNA_Ecto-sp13_S_contig16857.4901.1 vs. uniprot
Match: A0A151Z2Z6_9MYCE (Asparaginase n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z2Z6_9MYCE)

HSP 1 Score: 214 bits (546), Expect = 5.610e-65
Identity = 111/211 (52.61%), Postives = 148/211 (70.14%), Query Frame = 1
Query:   10 VLVINTGGTLGMRKEDNSGGLAPVPGYFTSQMLTMEELVSADDMPFFDIVEYADPLLDSSCFQPSDWARIAIDIGRAYHCYDGFVVCMGTDTMAYAASALSFMLENLGKTVVFTGSQIPLAEVYNDARRNVVVAMMIAGSQKIPEVCLFFCNKLLRANRAVKVDSLALTAYDSPNFPHLGDLGVKMRYRRDVALHPPRGPFRVHTNMDSRV 642
            + +I TGGTLGM+++  +G L P P Y   Q+  + E+ S +DMP + + E+ +P +DSS  +  DW RIA  I + Y+ YDGFVV  GTDTMAY ASALSFMLENLGK V+ TGSQIP AE+ NDARRN++ +M+ AG   IPEVC+FF N+LLR  R+ KVDS +L A++SPN P L  LG+++    DV L+ P+G FRVH N++  V
Sbjct:   33 IFLIYTGGTLGMKRDPIAGTLRPEPNYLVQQLEILPEMKS-NDMPEYTLFEF-EPPIDSSDMEHDDWVRIASLIEKNYYDYDGFVVIHGTDTMAYTASALSFMLENLGKPVILTGSQIPFAELINDARRNLITSMIFAGKCDIPEVCIFFNNQLLRGCRSRKVDSWSLDAFESPNCPPLATLGMEINVNTDVILNQPKGRFRVHENINKNV 241          
BLAST of mRNA_Ecto-sp13_S_contig16857.4901.1 vs. uniprot
Match: A0A8J4PLI2_9MYCE (Asparaginase n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PLI2_9MYCE)

HSP 1 Score: 215 bits (547), Expect = 6.230e-64
Identity = 110/214 (51.40%), Postives = 148/214 (69.16%), Query Frame = 1
Query:    1 QSTVLVINTGGTLGMRKEDNSGGLAPVPGYFTSQMLTMEELVSADDMPFFDIVEYADPLLDSSCFQPSDWARIAIDIGRAYHCYDGFVVCMGTDTMAYAASALSFMLENLGKTVVFTGSQIPLAEVYNDARRNVVVAMMIAGSQKIPEVCLFFCNKLLRANRAVKVDSLALTAYDSPNFPHLGDLGVKMRYRRDVALHPPRGPFRVHTNMDSRV 642
            +  + +I TGGTLGM+++  SG L P P Y   Q+  + E+ S D MP + + E+ +P +DSS  +  DW +IA  I + Y+ YDGFVV  GTDTMAY ASALSFMLENLGK VVFTGSQIP AE+ NDARRN++ A++ AG   +PEVC+FF N+LLR  R+ KVDS +L A+DSPN P L  LG+++    D+ L+ P+G FRVH  ++  +
Sbjct:  141 RGNIFIIYTGGTLGMKRDPISGALRPEPHYLEEQLSALPEMKSLD-MPVYTLTEF-NPPIDSSDMEHEDWVKIAKLIEQNYYDYDGFVVLHGTDTMAYTASALSFMLENLGKPVVFTGSQIPFAELINDARRNLLTAIIFAGKVDLPEVCIFFNNQLLRGCRSRKVDSWSLDAFDSPNCPPLATLGMEINVNYDIVLNQPKGRFRVHEEINKNI 352          
BLAST of mRNA_Ecto-sp13_S_contig16857.4901.1 vs. uniprot
Match: A0A7S3HHR8_9STRA (Asparaginase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HHR8_9STRA)

HSP 1 Score: 210 bits (534), Expect = 1.890e-63
Identity = 106/199 (53.27%), Postives = 142/199 (71.36%), Query Frame = 1
Query:   49 KEDNSGGLAPVPGYFTSQMLTMEELVSADDMPFFDIVEYADPLLDSSCFQPSDWARIAIDIGRAYHCYDGFVVCMGTDTMAYAASALSFMLENLGKTVVFTGSQIPLAEVYNDARRNVVVAMMIAGSQKIPEVCLFFCNKLLRANRAVKVDSLALTAYDSPNFPHLGDLGVKMRYRRDVALHPPRGPFRVHTNMDSRVV 645
            K D  G LAP PGY T ++  + E +  DDMP F + EY + L+DSSC  P  W +IA DI  +Y  ++GFVV MGTDTMAYAASALSFMLENL KTVVFTGSQIP A+VYNDARRN++V+M++A + + PEVCL F +K++R NRAVKV+S  L A+D+PN+P L  L   +  R+++ +  P G  +V   +DS+++
Sbjct:    4 KPDLYGSLAPSPGYLTRKINELPE-IGRDDMPKFVVKEYEN-LIDSSCMGPEHWVQIATDIEESYDDFNGFVVIMGTDTMAYAASALSFMLENLSKTVVFTGSQIPFAQVYNDARRNLLVSMIVAATCEFPEVCLCFNDKIMRGNRAVKVNSTGLDAFDTPNYPPLAMLACSITSRKELVMTQPTGELQVKKQLDSKIL 200          
BLAST of mRNA_Ecto-sp13_S_contig16857.4901.1 vs. uniprot
Match: A0A6U2EM40_HEMAN (Asparaginase n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2EM40_HEMAN)

HSP 1 Score: 209 bits (532), Expect = 6.530e-63
Identity = 110/215 (51.16%), Postives = 148/215 (68.84%), Query Frame = 1
Query:    1 QSTVLVINTGGTLGMRKEDNSGGLAPVPGYFTSQMLTMEELVSADDMPFFDIVEYADPLLDSSCFQPSDWARIAIDIGRAYHCYDGFVVCMGTDTMAYAASALSFMLENLGKTVVFTGSQIPLAEVYNDARRNVVVAMMIAGSQKIPEVCLFFCNKLLRANRAVKVDSLALTAYDSPNFPHLGDLGVKMRYRRDVALHPPRGPFRVHTNMDSRVV 645
            ++ +L + TGGT+GM K +++G L P+PGY T Q+  +    +++ +P   +VEY D LLDS    P +W +IA+DI   Y  YDGF+V MGTDTMAY ASALSFMLENLGKTVV TGSQIP  + Y+DARRN++ +M +A S  IPEV LFF +KL R NR+ K DS +  A+ SPNFP L  +G+ ++  + + L  P+  F+VHT MD RVV
Sbjct:   25 KAKLLCLYTGGTMGM-KHNSAGMLEPIPGYLTEQIQDILNCHTSEALPDTTVVEY-DTLLDSCDMNPENWKKIALDIQDNYQSYDGFLVIMGTDTMAYLASALSFMLENLGKTVVVTGSQIPFVKTYSDARRNLLSSMTLACSLDIPEVTLFFDDKLHRGNRSRKADSGSFDAFSSPNFPPLATMGLSVQVNKQLLLPQPKARFKVHTTMDFRVV 237          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16857.4901.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWL4_ECTSI1.010e-13393.02Asparaginase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A835Z9K3_9STRA9.020e-7359.00Asparaginase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A482SE24_9ARCH3.170e-7254.25Asparaginase n=1 Tax=archaeon TaxID=1906665 RepID=... [more]
A0A7S2WSI2_9STRA4.630e-6857.22Asparaginase n=1 Tax=Rhizochromulina marina TaxID=... [more]
A0A2R5G1I7_9STRA1.420e-6755.87Asparaginase n=1 Tax=Hondaea fermentalgiana TaxID=... [more]
A0A7S3XTZ4_HETAK3.430e-6760.43Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A151Z2Z6_9MYCE5.610e-6552.61Asparaginase n=1 Tax=Tieghemostelium lacteum TaxID... [more]
A0A8J4PLI2_9MYCE6.230e-6451.40Asparaginase n=1 Tax=Polysphondylium violaceum Tax... [more]
A0A7S3HHR8_9STRA1.890e-6353.27Asparaginase n=1 Tax=Spumella elongata TaxID=89044... [more]
A0A6U2EM40_HEMAN6.530e-6351.16Asparaginase n=1 Tax=Hemiselmis andersenii TaxID=4... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16857contigEcto-sp13_S_contig16857:300..3752 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score392.1
Seed ortholog evalue1.7e-106
Seed eggNOG ortholog2880.D7FWL4
Model size681
KEGG rclassRC00010,RC02798
KEGG koko:K01424
KEGG ReactionR00485
KEGG Pathwayko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.asparagine catabolic process
EggNOG OGsCOG0252@1,KOG0503@2759
Ec32 ortholog descriptionAsparaginase
Ec32 orthologEc-11_002360.1
EC3.5.1.1
Cds size681
COG Functional cat.EJ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462883.5038548-CDS-Ecto-sp13_S_contig16857:299..4771681462883.5038548-CDS-Ecto-sp13_S_contig16857:299..477Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16857 300..477 -
1681462883.5150554-CDS-Ecto-sp13_S_contig16857:1654..17971681462883.5150554-CDS-Ecto-sp13_S_contig16857:1654..1797Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16857 1655..1797 -
1681462883.5238562-CDS-Ecto-sp13_S_contig16857:2291..23121681462883.5238562-CDS-Ecto-sp13_S_contig16857:2291..2312Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16857 2292..2312 -
1681462883.5323472-CDS-Ecto-sp13_S_contig16857:3266..34391681462883.5323472-CDS-Ecto-sp13_S_contig16857:3266..3439Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16857 3267..3439 -
1681462883.540595-CDS-Ecto-sp13_S_contig16857:3586..37521681462883.540595-CDS-Ecto-sp13_S_contig16857:3586..3752Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16857 3587..3752 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16857.4901.1prot_Ecto-sp13_S_contig16857.4901.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig16857 300..3752 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig16857.4901.1

>prot_Ecto-sp13_S_contig16857.4901.1 ID=prot_Ecto-sp13_S_contig16857.4901.1|Name=mRNA_Ecto-sp13_S_contig16857.4901.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=227bp
QSTVLVINTGGTLGMRKEDNSGGLAPVPGYFTSQMLTMEELVSADDMPFF
DIVEYADPLLDSSCFQPSDWARIAIDIGRAYHCYDGFVVCMGTDTMAYAA
SALSFMLENLGKTVVFTGSQIPLAEVYNDARRNVVVAMMIAGSQKIPEVC
LFFCNKLLRANRAVKVDSLALTAYDSPNFPHLGDLGVKMRYRRDVALHPP
RGPFRVHTNMDSRVVSPCSRCGRACAA
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mRNA from alignment at Ecto-sp13_S_contig16857:300..3752-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig16857.4901.1 ID=mRNA_Ecto-sp13_S_contig16857.4901.1|Name=mRNA_Ecto-sp13_S_contig16857.4901.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3453bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16857:300..3752- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGTCAACGGTGCTAGTGATCAACACCGGGGGTACGCTCGGGATGAGGAA GGAAGATAATTCGGGCGGCCTGGCTCCCGTGCCGGGCTACTTCACCTCGC AGATGCTCACCATGGAGGAGCTGGTGAGCGCGGACGACATGCCATTTTTC GACATCGTGGAGTACGGTACGTACGCGTATCCCCCCTCCGATCAACGTCG CCATATACTCACATTGCTCCGTCTTTCTACTGCGGCATGACACGCGTGGA CGACATTTCTAGCTAGTTGCTTTTTTTGTTTTTTCGCTGTACGGTTTCGA CGCATGAGAAGAGCAGATCCTTTGCTGGACAGCTCTTGTTTCCAGCCGTC CGACTGGGCCCGGATCGCCATAGACATCGGCCGCGCCTACCACTGCTACG ACGGTTTCGTGGTTTGCATGGGAACAGACACGATGGCCTACGCGGCAAGC GCACTAAGCTTCATGCTGGAGAACCTCGGGAAAACGGTAAGAACGTGGAA GATGGGGGTTGTGTGTGTCGTGTTCTGCAGGCGTTTTGTAACGCCGGGGA TGCGCCGATTGGTTAATTTCCTCGCGTGTGGTAGTTTCGCGTGAATGGCA AGGTTTGTTCGACATGTCGAAGTCTTCACGTCTTGGGTCAGGAAGGAAGT TCGGTACTCAGGCCCTATTCCTAGTGCCGCCCGCGCGGCTCAGTCCATGT GGTGTGCTGGGGGGAGAGAAGGCCCCCTCGTGCAGCCGGTTGGGTGTGAT CATGTTGCCCTCGACACCGGTTTTCTCCCTCCGACGGCTAAGCAGCGCGT GCTCTTCGCTCTTTTTTTTTTGTCTGCGCCTATTAGAGTGTCTTGCTTGT TGGCTGCCGTTGCTCGGTTTCCGCCATCATTAATGAGGAAGGGGTGACGT GTGTGCGCAACGGGCCGAGCAAACGAGGCGCCGAGTGTGTGCTGGGCCGT GTGGTCCGCCTGCCTGCTTCTCTCCCCCGAGAGCACAATTGTCGTTTTGA GTGGCAGCACATTTTGCGCGTGGATGACATTCTTTCCCCTCGCGGACCGT GTCACTATTCCCCACCGCTGAGGTGTGAAGAGTGTCGGGCTGGATGGGGG AGCATTTCCTATTGGTTTGGTTGATTTTCATGCGCACTCTGAATGTACCT TCCAGGACCTTCGCCTCTCAACTTCCGTCACGGCGTTTGACGTCGTTTGG CCTACCGTATCACGCCTCTGTCTGGCTGTCTGTCTGCTTGTCTCCCTTTT TGTCTCCCTGTCTATCTGTCTACGTGTCTGTCCGTCTGTCAGTCTGTCTG GCTGTCCGTCTGTCTGTCTGTATGTATGTATGAACCCGAATCTCTCTCCG TGCATGTCTCATGTCTCCGTCGGCGTCTCACTTTCGGACGCGATCGGTCT TCCACACATCGTCGGCGAACTTATCTGGGTGTGGATCAAGGTGGTTTTTA CGGGCAGTCAGGTACGGCTCGCTGGGTTTTAGAAGGTGGTTGCGTAAGCG TCGGTACTTTCAGGCAAGAAGAAAGGTAGCTCTAACGAAACCGATCAATC TGTGGACGGTTGAGCAAACCGAACGTCTCTGTGAACATGTATGGGGTCTC TTGAGTCGGTAGCGGCGTGGACGTCGGGAAGGTATATCTATTTACAACAC GGGTGGATGGAACTGATGGCAAGATGTGGGATGACAGAGATCCAGAAAAG TAGCTTCGATCTTTTCATGCTACGTTTCGAGGAGTGTCGCAACGGCGGTG TGAGTACAAATTCAACAAGGACAACATCAACGACAACGACAGCGAAAACT TACACGATCAAACCTTGGCCAAACGGTTGGCCATGTCAATGCTGGTCAAA GAGATGGAGAGAGAGAGACAGACCGACACAGAGAGACAGACCGAGAGAGA GAGAGAGAGAGAGAAGTCACACCAACAACACGATTCCATTGCTTCGGTGA CACAGATTCCGCTCGCGGAGGTGTACAACGATGCGCGTCGCAACGTGGTA GTGGCCATGATGATCGCGGGCAGCCAGAAGATACCGGAGGTGTGCCTCTT CTTTTGCAACAAACTCTTGCGAGCGAACAGGGCGGTGAAGGTCGACAGGT GACTTTTACTCGGTGCTGTTGTTGTTGTTGTTGCTACTGCTACAGCTGCT GCCCCTTTTTGTTGTTGTCTTTAAGGTCATCCTCCCCCAAAATCTAGCTC GGCGACCAAGAGGACTCCAAAGCATGTTGCTTCTCAACCCGGATTGTTGC AACTTTTTCCTCCGGTGGTTGTTCACACCTCTTGTTTTTGTGGTTCGAAA ACTGCACACGCGTGGGGTCATGGGGTAGCCTTTTCTACACTGTAGACGAG GAATCCGATTTTTTTCTCTCTTTTATTGTCTCTATCGTTTTTTTATGTTT CGATCACAGCCCCGAGCAGGTGTAGGGAGTAGAAGAAGCGCTGGAGGGCT ACTGTTGCTCGTGTGGTCTACTCTTCTCCAAGACCTACCCGAGGTGCTCG GGGTCCTCCCGACATGCAGGCTTTCCGTCGCGGCAAGCGATGCTATAAAG CTTTTTGCGATCAGCTGCACCGATCTGTACCGTACTCGTAGTACTGTTTC CTTCCCCCAAGCTTGTCGGGGAGCCGCTCAAGCCCCTCGATCGCCAAGCA GTTGCAGCAGCAACACGGTGCGTAAGAAAATACCCGTTCTGGCCACTGGC ACCTGTACTCGGGGATTGTACCCACCTGCAAACCAGCCGACCAGCCAACC AGACGTATCAGACGGACCAGTGGGTACTCGGAAAGATCTGTTCCACATCG TCCCGAAACTCGCGTCTCCACCGTCCCCCCATGCCGCTGTGTTCCGAGTC GCCTCTTCTTGGCTTGGCATTGCAACCATTAGAAGATTCAGATTGGTAGT TTTACCACGACAAACACTATAACACCAACACCGACGGCCGTAGCGGCAAA ACAGCAACAAAACTCCTCATCCTCCTCCTCCTCCTCCGCCTCCACCTCCA CCACCCGTTGCTACACCATCCATTGCAGTAGACAATAGTACCAGCTCGCC AAAACGAGCAATGACTCGGACGTTCCAACCTTGCATCTCAAAAACCCACG CAAGGATAGGGTAGACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTGTC TATCTCTCTGCTCTCCACTCAAGGCGTCCATCCATCCAACAAACCGTTCT CTGGTGTATTCTCAATTCACCCATCAACCGCCGTGTTTCGCTTTGGCTCT CCCCCCCCCCCCCCCCCACGTGCAGCCTGGCGCTGACGGCGTACGACTCG CCTAACTTTCCCCACCTGGGGGACCTGGGCGTGAAGATGCGGTACCGCAG AGACGTAGCGCTTCACCCGCCGCGGGGGCCGTTCCGTGTGCACACCAACA TGGACTCTAGGGTGGTGAGTCCCTGCTCCCGGTGCGGCCGTGCGTGCGCC GCT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16857:300..3752-

>mRNA_Ecto-sp13_S_contig16857.4901.1 ID=mRNA_Ecto-sp13_S_contig16857.4901.1|Name=mRNA_Ecto-sp13_S_contig16857.4901.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=681bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16857:300..3752- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGTCAACGGTGCTAGTGATCAACACCGGGGGTACGCTCGGGATGAGGAA
GGAAGATAATTCGGGCGGCCTGGCTCCCGTGCCGGGCTACTTCACCTCGC
AGATGCTCACCATGGAGGAGCTGGTGAGCGCGGACGACATGCCATTTTTC
GACATCGTGGAGTACGCAGATCCTTTGCTGGACAGCTCTTGTTTCCAGCC
GTCCGACTGGGCCCGGATCGCCATAGACATCGGCCGCGCCTACCACTGCT
ACGACGGTTTCGTGGTTTGCATGGGAACAGACACGATGGCCTACGCGGCA
AGCGCACTAAGCTTCATGCTGGAGAACCTCGGGAAAACGGTGGTTTTTAC
GGGCAGTCAGATTCCGCTCGCGGAGGTGTACAACGATGCGCGTCGCAACG
TGGTAGTGGCCATGATGATCGCGGGCAGCCAGAAGATACCGGAGGTGTGC
CTCTTCTTTTGCAACAAACTCTTGCGAGCGAACAGGGCGGTGAAGGTCGA
CAGCCTGGCGCTGACGGCGTACGACTCGCCTAACTTTCCCCACCTGGGGG
ACCTGGGCGTGAAGATGCGGTACCGCAGAGACGTAGCGCTTCACCCGCCG
CGGGGGCCGTTCCGTGTGCACACCAACATGGACTCTAGGGTGGTGAGTCC
CTGCTCCCGGTGCGGCCGTGCGTGCGCCGCT
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