prot_Ecto-sp13_S_contig16834.4890.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16834.4890.1
Unique Nameprot_Ecto-sp13_S_contig16834.4890.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length186
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16834.4890.1 vs. uniprot
Match: D8LQW7_ECTSI (Peptidase aspartic, catalytic UBA-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQW7_ECTSI)

HSP 1 Score: 210 bits (534), Expect = 1.750e-62
Identity = 123/153 (80.39%), Postives = 128/153 (83.66%), Query Frame = 0 
Query:   34 MATQAPPTRRAKDNAQHSLPSAPTTGAAAATTNVPTTRQRDPSSRGRGRRRRPVPSNTTAVRALHLAVALLALAGRLVPVQGAGGDLGPSSEWQHPRSRDRRGNKTGGNGSGRGRRETRRGYAGGFSRREQSEREGAVVSEGEGGGGWSRRRK 186
            MATQAP  RRAKD AQHSLPSAPT GAAAATT VP TRQR  ++RG G RR PV S TT +RAL LAVALLALAGRLVP QGAGGDLGP SEWQHPRSR RRGNK GG+GSGRGRRE RRGYAG F  RE+SEREGAV SEGE GGGWSRRRK
Sbjct:    1 MATQAPSIRRAKDGAQHSLPSAPTDGAAAATTKVPMTRQRHSNTRGWGWRRCPVFSTTTTIRALRLAVALLALAGRLVPAQGAGGDLGPRSEWQHPRSRGRRGNKAGGDGSGRGRREARRGYAGAFPCRERSEREGAVASEGEAGGGWSRRRK 153
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16834.4890.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQW7_ECTSI1.750e-6280.39Peptidase aspartic, catalytic UBA-like n=1 Tax=Ect... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16834contigEcto-sp13_S_contig16834:3265..3822 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16834.4890.1mRNA_Ecto-sp13_S_contig16834.4890.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16834 3265..3822 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16834.4890.1 ID=prot_Ecto-sp13_S_contig16834.4890.1|Name=mRNA_Ecto-sp13_S_contig16834.4890.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=186bp
MVEDGCIDQRRRFDDACGCNIKRRQILLLTPPPMATQAPPTRRAKDNAQH
SLPSAPTTGAAAATTNVPTTRQRDPSSRGRGRRRRPVPSNTTAVRALHLA
VALLALAGRLVPVQGAGGDLGPSSEWQHPRSRDRRGNKTGGNGSGRGRRE
TRRGYAGGFSRREQSEREGAVVSEGEGGGGWSRRRK
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