mRNA_Ecto-sp13_S_contig16764.4841.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16764.4841.1 vs. uniprot
Match: D8LDM0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDM0_ECTSI) HSP 1 Score: 489 bits (1258), Expect = 7.530e-170 Identity = 251/253 (99.21%), Postives = 252/253 (99.60%), Query Frame = 1
Query: 1 LQLPFAIQCMVQNTGVSVVVAIGFLVADAHWCSKEVGGALVKTLLELSLSLKVPVVNGLCFRAVSEGDAAALSGKLAKGAIHMASVRDGKQETYTVSRAIPAVGNSGDLFASNSRGLSLGPKRRSSVFGQTRAVPTDLTSLLLGLKTSLKAHGATGMFGLARRFRLSDDDKSGTISFHEFQVCMRDAHMGWTEDELKNVFEHFDTDGSDTIDYDEFLFAVRGELNERRAQVILEAFEVMDKDKNGALNASDLK 759
LQLPFAIQCMVQ TGVSVVVAIGFLVADAHWCSKEVGGALVKTLLELSLSLKVPVVNGLCFRAVSEGDAAALSGKLAKGAIHM+SVRDGKQETYTVSRAIPAVGNSGDLFASNSRGLSLGPKRRSSVFGQTRAVPTDLTSLLLGLKTSLKAHGATGMFGLARRFRLSDDDKSGTISFHEFQVCMRDAHMGWTEDELKNVFEHFDTDGSDTIDYDEFLFAVRGELNERRAQVILEAFEVMDKDKNGALNASDLK
Sbjct: 120 LQLPFAIQCMVQKTGVSVVVAIGFLVADAHWCSKEVGGALVKTLLELSLSLKVPVVNGLCFRAVSEGDAAALSGKLAKGAIHMSSVRDGKQETYTVSRAIPAVGNSGDLFASNSRGLSLGPKRRSSVFGQTRAVPTDLTSLLLGLKTSLKAHGATGMFGLARRFRLSDDDKSGTISFHEFQVCMRDAHMGWTEDELKNVFEHFDTDGSDTIDYDEFLFAVRGELNERRAQVILEAFEVMDKDKNGALNASDLK 372
BLAST of mRNA_Ecto-sp13_S_contig16764.4841.1 vs. uniprot
Match: A0A835Z5X8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5X8_9STRA) HSP 1 Score: 137 bits (344), Expect = 1.070e-33 Identity = 85/253 (33.60%), Postives = 134/253 (52.96%), Query Frame = 1
Query: 1 LQLPFAIQCMVQNTGVSVVVAIGFLVADAHWCSKEVGGALVKTLLELSLSLKVPVVNGLCFRAVSEGDAAALSGKLAKGAIHMASVRDGKQETYTVSRAIPAVGNSGDLFASNSRGLSLGPKRRSSVFGQTRAVPTDLTSLLLGLKTSLKAHGATGMFGLARRFRLSDDDKSGTISFHEFQVCMRDAHMGWTEDELKNVFEHFDTDGSDTIDYDEFLFAVRGELNERRAQVILEAFEVMDKDKNGALNASDLK 759
L LPFA +++ + VV +G ++ +WCS+E+ + +LL L L+ VPVV GL + V+ + + +L V ++ +Y S + P G+ + + S + T A +LT+LL L+ +LK HGATG+ GLAR+FR+SD D SG + E + + ++ +L V FD DG + Y +FL VRGE+++RR Q++L AF +MD DKNG L+A DL+
Sbjct: 112 LALPFAAASLIKGCSIDCVVVLGQMLETDYWCSREIVQTVTSSLLSLGLAQGVPVVIGLNYERVASNQVDSQANRL---------VALAQKLSYPDSASPPTCGDKTPRTPTRAAPGSPIAEYSPPTTNGTTAPDANLTTLLEALRGALKKHGATGICGLARKFRISDSDGSGKLDKAEVAKAIAALKLAFSAAQLDEVMGFFDKDGDGQVCYKQFLAGVRGEMSDRRRQLVLAAFGIMDTDKNGTLDARDLR 355
BLAST of mRNA_Ecto-sp13_S_contig16764.4841.1 vs. uniprot
Match: A0A067C837_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C837_SAPPC) HSP 1 Score: 111 bits (278), Expect = 1.910e-24 Identity = 81/261 (31.03%), Postives = 122/261 (46.74%), Query Frame = 1
Query: 7 LPFAIQCMVQNTGVSVVVAIGFL-VADAHWCSKEVGGALVKTLLELSLSLKVPVVNGLCFRAVSEGDAAALSGKLA------KGAIHMASVRD----GKQETYTVSRAIPAVGNSGDLFASNSRGLSLGPKRRSSVFGQTRAVPTDLTSLLLGLKTSLKAHGATGMFGLARRFRLSDDDKSGTISFHEFQVCMRDAHMGWTEDELKNVFEHFDTDGSDTIDYDEFLFAVRGELNERRAQVILEAFEVMDKDKNGALNASDL 756
+P+A + N G VV GFL ADA + S + + L+++S++ P+V L A G A +G +H+ GK+ A P D S +S K P + L L+ +L HGA G+ GL R+FR+ DDD S T+ +EF+ + + M ++ E+ ++FE FD D S + YDEFL +RGELNERR Q++L AF V+D + NG + D+
Sbjct: 132 VPYAANKLALNGGFDAVVCFGFLNAADALFQSTAT--TVTQALIQISIATVKPIVRALFIGEPRVASVKAKGGWGADFAHSIEGLVHLGGFVSHPFRGKEIPNGSHHAAPKAAKKTDKVVSTGNTVSEAVKN----------APRAVADTLAALRQTLYEHGARGIVGLGRKFRIIDDDGSKTLDINEFKKAIAEHAMNLSDKEITDLFEFFDDDKSGNLSYDEFLVGLRGELNERRKQMVLLAFTVIDANGNGIVELDDI 380
BLAST of mRNA_Ecto-sp13_S_contig16764.4841.1 vs. uniprot
Match: W4GM18_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GM18_9STRA) HSP 1 Score: 107 bits (266), Expect = 8.670e-23 Identity = 83/264 (31.44%), Postives = 129/264 (48.86%), Query Frame = 1
Query: 7 LPFAIQCMVQNTGVSVVVAIGFL-VADAHWCSKEVGGALVKTLLELSLSLKVPVVNGLCFRAVSEGDAAALSGKLAKGAIHMASVRDGKQ----------ETYTVSRAIPAVG--NSGDLFASNSRGLSLGPKRRSSVFGQT-RAVPTDLTSLLLGLKTSLKAHGATGMFGLARRFRLSDDDKSGTISFHEFQVCMRDAHMGWTEDELKNVFEHFDTDGSDTIDYDEFLFAVRGELNERRAQVILEAFEVMDKDKNGALNASDL 756
LP+A + + G VV G L +DA + + +++ L+++S++ P+V + V E A++ K GA AS+ D Q SR A G ++ + ++VF +A P + L L+TSL HGA G+ GL R+FR+ DDD S T+ EF +R+ + + E+ ++F FD D S I YDEFL +RG+LN+RR Q++L AF V+D D NG L+ D+
Sbjct: 151 LPYAANKLAVHGGFDGVVVFGLLNPSDALF--PVLSTSILPALVQISIAAVKPIVRAIF---VGEPRVASVKAKGGYGAEFAASIEDLVQLGGFVHRPTSAASVASRGASAQGTHHAXXXXXXXXXXXAAVVHSNNNVFPDAIKAAPRAVQDTLTALRTSLYEHGARGIVGLGRKFRIMDDDNSRTLDLAEFSKAIREHGLPLSSSEVADLFAFFDGDRSGHISYDEFLTGIRGDLNDRRRQLVLLAFAVVDADGNGILDLDDI 409
BLAST of mRNA_Ecto-sp13_S_contig16764.4841.1 vs. uniprot
Match: A0A7S0SSL8_9STRA (6,7-dimethyl-8-ribityllumazine synthase (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SSL8_9STRA) HSP 1 Score: 103 bits (258), Expect = 1.230e-22 Identity = 52/98 (53.06%), Postives = 66/98 (67.35%), Query Frame = 1
Query: 406 TDLTSLLLGLKTSLKAHGATGMFGLARRFRLSDDDKSGTISFHEFQVCMRDAHMGWTEDELKNVFEHFDTDGSDTIDYDEFLFAVRGELNERRAQVIL 699
TD LL L+ SLKA+GATG+ L R+FR+ DDD S +I EF + + WT ++K+VF+ FDTD S TI YDEFL VRGELNERR Q++L
Sbjct: 134 TDPEVLLQSLRESLKANGATGIISLGRKFRIIDDDNSNSIDLAEFTKAISEHAFYWTHAQIKSVFDKFDTDKSGTISYDEFLIGVRGELNERRKQLVL 231
BLAST of mRNA_Ecto-sp13_S_contig16764.4841.1 vs. uniprot
Match: A0A7S3GU51_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GU51_9STRA) HSP 1 Score: 100 bits (250), Expect = 2.020e-22 Identity = 52/112 (46.43%), Postives = 73/112 (65.18%), Query Frame = 1
Query: 421 LLLGLKTSLKAHGATGMFGLARRFRLSDDDKSGTISFHEFQVCMRDAHMGWTEDELKNVFEHFDTDGSDTIDYDEFLFAVRGELNERRAQVILEAFEVMDKDKNGALNASDL 756
LL LKT L GA G+ GLAR F++ DDD SG + F EF+ MRD M TE EL +F+ FD + + +I YD FL A+ G LN+RR +++ AF+V+DKD +G + +D+
Sbjct: 37 LLKRLKTQLANRGAKGIAGLARLFKIMDDDASGGLCFAEFKKAMRDCQMVLTEMELLVLFKRFDRENTGSISYDNFLTAITGSLNKRRRKLVNMAFDVLDKDGSGVIELNDI 148
BLAST of mRNA_Ecto-sp13_S_contig16764.4841.1 vs. uniprot
Match: A0A8J4W007_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae 00238/432 TaxID=1284355 RepID=A0A8J4W007_9STRA) HSP 1 Score: 104 bits (259), Expect = 2.920e-22 Identity = 47/109 (43.12%), Postives = 77/109 (70.64%), Query Frame = 1
Query: 433 LKTSLKAHGATGMFGLARRFRLSDDDKSGTISFHEFQVCMRDAHMGWTEDELKNVFEHFDTDGSDTIDYDEFLFAVRGELNERRAQVILEAFEVMDKDKNGALNASDLK 759
L+ SL HGA G+ GL R+FR++DD+ + +S EF +R+ +G ++ E++ +F DT+ S +D+DEFL A+RGELNERR Q++L AF+++D D +G ++ +D+K
Sbjct: 129 LRDSLYEHGAKGIAGLGRKFRIADDNGNRKLSLSEFSKAVREHDLGLSQTEVEELFHFIDTNNSGDLDFDEFLLAIRGELNERRTQLVLAAFKILDADGSGIVDLNDIK 237
BLAST of mRNA_Ecto-sp13_S_contig16764.4841.1 vs. uniprot
Match: A0A485L9H9_9STRA (Aste57867_17964 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L9H9_9STRA) HSP 1 Score: 105 bits (261), Expect = 5.830e-22 Identity = 52/129 (40.31%), Postives = 86/129 (66.67%), Query Frame = 1
Query: 370 RSSVFGQTRAVPTDLTSLLLGLKTSLKAHGATGMFGLARRFRLSDDDKSGTISFHEFQVCMRDAHMGWTEDELKNVFEHFDTDGSDTIDYDEFLFAVRGELNERRAQVILEAFEVMDKDKNGALNASDL 756
++SV +++ + +L L+ SLKA GA+GM GL+R+FR+ DDD +G++S EF+ MR+ + ++ +L+ +FE FDTD S +ID+ EFL VR +NERR ++ AF+ +D++ +G L SD+
Sbjct: 321 KNSVLPKSKDISVGTQMILSRLRASLKARGASGMVGLSRKFRIMDDDGNGSLSMAEFKKAMRECDVECSDGDLRLLFESFDTDESQSIDFKEFLNGVREPMNERRLALVNAAFKKIDRNGDGVLEPSDI 449
BLAST of mRNA_Ecto-sp13_S_contig16764.4841.1 vs. uniprot
Match: A0A1V9ZJG4_9STRA (Amino-acid N-acetyltransferase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZJG4_9STRA) HSP 1 Score: 105 bits (261), Expect = 6.300e-22 Identity = 52/129 (40.31%), Postives = 87/129 (67.44%), Query Frame = 1
Query: 370 RSSVFGQTRAVPTDLTSLLLGLKTSLKAHGATGMFGLARRFRLSDDDKSGTISFHEFQVCMRDAHMGWTEDELKNVFEHFDTDGSDTIDYDEFLFAVRGELNERRAQVILEAFEVMDKDKNGALNASDL 756
R+ + + + V +L L+ SLKA GA+G+ GL+R+FRL D+D +G++ +EF+ MR++ + ++ +L+ +FE FDTD S TI++ EFL VR +NERR Q++ EAF +DK+ +G ++ SD+
Sbjct: 316 RNGLLPKPKDVTVGTKMILSRLRASLKARGASGIVGLSRKFRLMDEDGNGSLDLNEFKQAMRESKVECSDADLRLLFEAFDTDDSHTIEFKEFLDGVREPMNERRLQLVHEAFRKLDKNGDGVVDPSDI 444
BLAST of mRNA_Ecto-sp13_S_contig16764.4841.1 vs. uniprot
Match: A0A6G0XBT8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XBT8_9STRA) HSP 1 Score: 102 bits (255), Expect = 2.500e-21 Identity = 50/129 (38.76%), Postives = 86/129 (66.67%), Query Frame = 1
Query: 370 RSSVFGQTRAVPTDLTSLLLGLKTSLKAHGATGMFGLARRFRLSDDDKSGTISFHEFQVCMRDAHMGWTEDELKNVFEHFDTDGSDTIDYDEFLFAVRGELNERRAQVILEAFEVMDKDKNGALNASDL 756
++SV + + + +L L+ SLK+ GA G+ GL+R+FR+ DDD +G+IS EF+ MR+ ++ +E +++ +F+ FDTD S +ID+ EFL VR +N+RR +++ EAF +D++ +G L SD+
Sbjct: 320 KNSVLPRPKEISVGTKMILSRLRESLKSRGAVGIVGLSRKFRIMDDDNNGSISLVEFKKAMRECNVECSEADMRLLFDAFDTDESQSIDFKEFLNGVREPMNDRRLRLVHEAFAKIDRNGDGVLEPSDI 448 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16764.4841.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16764.4841.1 >prot_Ecto-sp13_S_contig16764.4841.1 ID=prot_Ecto-sp13_S_contig16764.4841.1|Name=mRNA_Ecto-sp13_S_contig16764.4841.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=244bp MVQNTGVSVVVAIGFLVADAHWCSKEVGGALVKTLLELSLSLKVPVVNGLback to top mRNA from alignment at Ecto-sp13_S_contig16764:3..3181+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16764.4841.1 ID=mRNA_Ecto-sp13_S_contig16764.4841.1|Name=mRNA_Ecto-sp13_S_contig16764.4841.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3179bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16764:3..3181+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16764:3..3181+ >mRNA_Ecto-sp13_S_contig16764.4841.1 ID=mRNA_Ecto-sp13_S_contig16764.4841.1|Name=mRNA_Ecto-sp13_S_contig16764.4841.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=732bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16764:3..3181+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |