mRNA_Ecto-sp13_S_contig1675.4837.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1675.4837.1 vs. uniprot
Match: D7G5A2_ECTSI (Probable chromatin remodelling complex ATPase chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5A2_ECTSI) HSP 1 Score: 1099 bits (2843), Expect = 0.000e+0 Identity = 611/671 (91.06%), Postives = 615/671 (91.65%), Query Frame = 3
Query: 216 MSGSGAEVYGAPVKAATSAYMFFQGDQYSNHKDEFAGLALGQQGAEISRRWRELPEEERSKFDALAAEDRKRFQEESEARDAEVAARQEANRAARHADPASSTYMRERAPVEPKKERKVTREEDMSEERLEARRLAKEKREKQKAARLAAXXXXXXXXXXXXXXXXXXXRKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKEEDAPKSXXXXXXXXXXXXXXXXXXADEAMDDVNGEDTAPTYLTKQPPSISGGTMRSYQLEGLNWMVNLQAQGTNGILADEMGLGKTLQSISILAYMRDFQNVTGPHIILLPKSVLGNWQLEFKRFCPDIRVLRLSGTKDERAAIIRNDLKPGSPEDERDWDVLVTTYEVANIEKTSLNKIGWRYLIIDEAHRLKNESSLFSMTVRELTTQYRLLLTGTPLQNNLHELWALLNFLLPTVFQDSEAFSKVFDLNVDDADKKQNMIKQLHKILRPFMLRRLKKEVEKSLPPKEETILFTSMSEVQRKVYKGVLMRDIDTINGTSAGRTAILNIVMQLRKCCNHPYLFPNTEDRNLDPMGEHLVENCGKMILLDKLLTRLKAAGHRVLVFSQMTRMMDILEDLMHMREYKYCRIDGNTPHDTRQDLIEEYNAPGSEKFIFLLSTRAGGLGINLQSADTCILYDSDWNPQ 2228
MSGSGA +GAPVKAATSAYMFFQGDQYSNHKDEFAGLALGQQGAEISRRWRELP+EERS+FDALAAEDRKRFQEESEARDAEVAARQEANRAAR+ADPASSTYMRERA VEPKKERKVTREEDMSEERLEARRLAKEKR KQK ARLAA XXXXXXXXXXXXXXX RKR XXXXXXXXX XXXX ADEAMDDVNGEDTAPTYLTKQPPSISGGTMRSYQLEGLNWMVNLQAQGTNGILADEMGLGKTLQSISILAYMRDFQNVTGPHIILLPKSVLGNWQLEFKRFCPDIRVLRLSGTKDERAA IRNDLKPGSPEDERDWDVLVTTYEVANIEKT LNKIGWRYLIIDEAHRLKNESSLFSMTVRELTTQYRLLLTGTPLQNNLHELWALLNFLLPTVFQDSEAFSKVFDLNVDDADKKQNMIKQLHKILRPFMLRRLKKEVEKSLPPKEETILFTSMSEVQRKVYKGVLMRDIDTINGTSAGRTAILNIVMQLRKCCNHPYLFPNTEDRNLDPMGEHLVENCGKMILLDKLLTRLKAAGHRVLVFSQMTRMMDILEDLMHMREYKYCRIDGNTPHDTRQDLIEEYNAPGSEKFIFLLSTRAGGLGINLQSADTCILYDSDWNPQ
Sbjct: 1 MSGSGAGAFGAPVKAATSAYMFFQGDQYSNHKDEFAGLALGQQGAEISRRWRELPQEERSRFDALAAEDRKRFQEESEARDAEVAARQEANRAARYADPASSTYMRERASVEPKKERKVTREEDMSEERLEARRLAKEKRAKQKDARLAAEAEXXXXXXXXXXXXXXXARKRIKYILRQSDIFATHFGVALSDSXXXXXXXXXXXXXXXXXXXXXXGGSPSKRRQAGRGAADEAMDDVNGEDTAPTYLTKQPPSISGGTMRSYQLEGLNWMVNLQAQGTNGILADEMGLGKTLQSISILAYMRDFQNVTGPHIILLPKSVLGNWQLEFKRFCPDIRVLRLSGTKDERAATIRNDLKPGSPEDERDWDVLVTTYEVANIEKTYLNKIGWRYLIIDEAHRLKNESSLFSMTVRELTTQYRLLLTGTPLQNNLHELWALLNFLLPTVFQDSEAFSKVFDLNVDDADKKQNMIKQLHKILRPFMLRRLKKEVEKSLPPKEETILFTSMSEVQRKVYKGVLMRDIDTINGTSAGRTAILNIVMQLRKCCNHPYLFPNTEDRNLDPMGEHLVENCGKMILLDKLLTRLKAAGHRVLVFSQMTRMMDILEDLMHMREYKYCRIDGNTPHDTRQDLIEEYNAPGSEKFIFLLSTRAGGLGINLQSADTCILYDSDWNPQ 671
BLAST of mRNA_Ecto-sp13_S_contig1675.4837.1 vs. uniprot
Match: A0A7S1XV30_9STRA (Hypothetical protein (Fragment) n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XV30_9STRA) HSP 1 Score: 649 bits (1675), Expect = 3.820e-213 Identity = 362/686 (52.77%), Postives = 442/686 (64.43%), Query Frame = 3
Query: 231 AEVYGAPVKAATSAYMFFQGDQYSNHKDEFAGLA---LGQQGAEISRRWRELPEEERSKFDALAAEDRKRFQEESEARDAEVAARQEANRAARHADPASSTYMRERAPVE-----PKKERKVTREEDMSEERLEARRLAKEKREKQKAARLAAXXXXXXXXXXXXXXXXXXXRKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKEEDAPKSXXXXXXXXXXXXXXXXXXADEAMDDVNG----------EDTAPTYLTKQPPSISGGTMRSYQLEGLNWMVNLQAQGTNGILADEMGLGKTLQSISILAYMRDFQNVTGPHIILLPKSVLGNWQLEFKRFCPDIRVLRLSGTKDERAAIIRNDLKPGSPEDERDWDVLVTTYEVANIEKTSLNKIGWRYLIIDEAHRLKNESSLFSMTVRELTTQYRLLLTGTPLQNNLHELWALLNFLLPTVFQDSEAFSKVFDLNVDDADKKQNMIKQLHKILRPFMLRRLKKEVEKSLPPKEETILFTSMSEVQRKVYKGVLMRDIDTI-NGTSAGRTAILNIVMQLRKCCNHPYLFPNTEDRNLDPMGEHLVENCGKMILLDKLLTRLKAAGHRVLVFSQMTRMMDILEDLMHMREYKYCRIDGNTPHDTRQDLIEEYNAPGSEKFIFLLSTRAGGLGINLQSADTCILYDSDWNPQV 2231
A+V AP + A SAY FQ +++ K+ GL LG I++RW+EL EE+SKF+ LAAED+ R++ ES A DA Q RA AD + P E P+K R V+ E KR +Q+AAR A +R K+E A + DEA D NG E A T+L +QP +I G +R YQLEGLNW++ LQ G NGILADEMGLGKTLQSISIL+YM +++NV GPH++L+PKS L NW EF+RFCP ++ L+ G+K++R +I +KPGSP ERDWDVLVTTYE+ANIEK ++ K GW+YLIIDEAHRLKNE+S+FS TVR ++T+YRLL+TGTPLQNNLHELWALLNFLLP VF SE F + FDL+VDD + K MIKQLHK+LRPFMLRRLK +VEKSLPPK ETILFT MS Q+KVYK VL RD+D + AG+T + NIVMQLRK CNHPYLFP EDR+LDP+GEHLV NCGKM+LLDKLL LK+ G RVL+F+QMTR +DI EDLMHMR+Y+YCRIDGNT ++ R+D I+ YNAP SE F F+LSTRAGGLGINLQ+AD CILYDSDWNPQ+
Sbjct: 2 ADVAAAPPRRARSAYAIFQAEEHGRLKESGEGLGGGGLGDVAKAIAKRWQELTPEEKSKFEKLAAEDKARYEAESAAADAAAEEAQAKRRADLEADVTGPRKRTQLVPAEAKRAAPRKPRVVSAE-------------VTAKRAEQRAAREAREAEIDKAHEENKAFIARQAEQRLQYLLKQSDIFQHFGKGT--------------KQEAASAAGGAATDDTPMSPSKRRASVDEAEGDANGDGEGGRDTPSEGAANTFLLRQP-TILQGQLRPYQLEGLNWLIRLQENGVNGILADEMGLGKTLQSISILSYMLEYRNVRGPHLVLVPKSTLSNWMNEFRRFCPSLKPLKFHGSKEQRRELIEEKIKPGSPASERDWDVLVTTYEIANIEKGTIIKFGWQYLIIDEAHRLKNEASIFSRTVRMMSTRYRLLITGTPLQNNLHELWALLNFLLPDVFASSEQFDEWFDLDVDDDEAKTRMIKQLHKLLRPFMLRRLKADVEKSLPPKSETILFTGMSAAQKKVYKSVLRRDVDALLEDNKAGKTQLQNIVMQLRKACNHPYLFPGVEDRSLDPLGEHLVTNCGKMVLLDKLLRNLKSRGSRVLIFTQMTRQLDIFEDLMHMRQYQYCRIDGNTNYEDREDQIDAYNAPDSEIFAFILSTRAGGLGINLQTADVCILYDSDWNPQM 659
BLAST of mRNA_Ecto-sp13_S_contig1675.4837.1 vs. uniprot
Match: A0A4Q3BVS4_9BACT (DEAD/DEAH box helicase n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4Q3BVS4_9BACT) HSP 1 Score: 609 bits (1571), Expect = 3.730e-210 Identity = 300/442 (67.87%), Postives = 355/442 (80.32%), Query Frame = 3
Query: 909 DEAMDDVNGEDTAPTYLTKQPPSISGGTMRSYQLEGLNWMVNLQAQGTNGILADEMGLGKTLQSISILAYMRDFQNVTGPHIILLPKSVLGNWQLEFKRFCPDIRVLRLSGTKDERAAIIRNDLKPGSPEDERDWDVLVTTYEVANIEKTSLNKIGWRYLIIDEAHRLKNESSLFSMTVRELTTQYRLLLTGTPLQNNLHELWALLNFLLPTVFQDSEAFSKVFDLNVDDADKKQNMIKQLHKILRPFMLRRLKKEVEKSLPPKEETILFTSMSEVQRKVYKGVLMRDIDTINGTSAG-----RTAILNIVMQLRKCCNHPYLFPNTEDRNLDPMGEHLVENCGKMILLDKLLTRLKAAGHRVLVFSQMTRMMDILEDLMHMREYKYCRIDGNTPHDTRQDLIEEYNAPGSEKFIFLLSTRAGGLGINLQSADTCILYDSDW 2219
+E DD T L+KQP SI+GG +R YQLEGLNWM+ LQ G NGILADEMGLGKTLQSISILAY+R+F+ V GPH+I++PKS L NWQ EFKRFCP +RVL G+KDER II L+P + + RDWDV+VTTYEV N+EK +L KI WRYLIIDEAHRLKNE+S FS TVR L TQ+RLLLTGTPLQNNLHELWALLNFLLP VF SE F F+L+VDD KQ MI QLHK+LRPFMLRRLK +VE SLPPK ETILFT MS +Q+ +Y+ +L+RDIDTIN + RTAILNIVMQLRKCCNHPYLFP+ EDR+LDP+G+HL NCGKM+L+DKLL ++K GHRVL+FSQMTRM+DI+ED + R+Y+YCRIDGNT ++ R+D IE++N P S+KF+F+LSTRAGGLGINLQ+ADT ILYDSDW
Sbjct: 8 EEEGDDEGEAPPHSTVLSKQPSSITGGLLRDYQLEGLNWMIRLQENGINGILADEMGLGKTLQSISILAYLREFKKVDGPHLIMVPKSTLSNWQREFKRFCPVVRVLCFHGSKDERQEIINERLRPAA-QGIRDWDVVVTTYEVLNLEKGALMKIAWRYLIIDEAHRLKNEASQFSQTVRLLNTQHRLLLTGTPLQNNLHELWALLNFLLPDVFASSEQFDDWFNLDVDDTAAKQRMISQLHKLLRPFMLRRLKADVESSLPPKSETILFTGMSTLQKTLYRQILLRDIDTINSAGSSNSQQSRTAILNIVMQLRKCCNHPYLFPSVEDRSLDPLGDHLFANCGKMVLMDKLLRKMKERGHRVLIFSQMTRMLDIMEDYLISRDYRYCRIDGNTSYEEREDRIEDFNRPNSDKFVFILSTRAGGLGINLQTADTVILYDSDW 448
BLAST of mRNA_Ecto-sp13_S_contig1675.4837.1 vs. uniprot
Match: A0A835Z8T6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8T6_9STRA) HSP 1 Score: 597 bits (1539), Expect = 1.380e-200 Identity = 290/414 (70.05%), Postives = 343/414 (82.85%), Query Frame = 3
Query: 993 MRSYQLEGLNWMVNLQAQGTNGILADEMGLGKTLQSISILAYMRDFQNVTGPHIILLPKSVLGNWQLEFKRFCPDIRVLRLSGTKDERAAIIRNDLKPGSPEDERDWDVLVTTYEVANIEKTSLNKIGWRYLIIDEAHRLKNESSLFSMTVRELTTQYRLLLTGTPLQNNLHELWALLNFLLPTVFQDSEAFSKVFDLNVDDADKKQNMIKQLHKILRPFMLRRLKKEVEKSLPPKEETILFTSMSEVQRKVYKGVLMRDIDTINGTSAG--RTAILNIVMQLRKCCNHPYLFPNTEDRNLDPMGEHLVENCGKMILLDKLLTRLKAAGHRVLVFSQMTRMMDILEDLMHMREYKYCRIDGNTPHDTRQDLIEEYNAPGSEKFIFLLSTRAGGLGINLQSADTCILYDSDWNPQ 2228
MR+YQLEGLNWM+NLQ QG NG+LADEMGLGKTLQSISILAYM DF+ ++GPH++LLPKS LGNW+ EF FCP +RVL L G + ER A+I L+PG P++ERDWDV +TTYEVA +E SL KIGWRYLIIDEAH+LKNE+S S T R + +RLLLTGTPLQNNLHELWALLN LLP VF D+ FS+ F+L+ D D K+ +I QLHKILRPFMLRRLK + K LPPK ETIL+T +S++QR++Y+ +LMR+ID +N T AG RTA+LNIVMQLRKCCNHPYLFP EDR+LDP+GEHLV+ CGK+ LLDKLL+RLK GHRVLVFSQMTRM+DILEDLMHMR ++YCRIDG+T +D R +LI+ YNAP S KF FLLSTRAGGLGINLQ+AD IL+DSDWNPQ
Sbjct: 1 MRAYQLEGLNWMINLQTQGINGVLADEMGLGKTLQSISILAYMCDFRGISGPHLVLLPKSTLGNWRGEFATFCPALRVLPLHGDRAEREALIEQRLRPGVPQEERDWDVCLTTYEVARMEVKSLEKIGWRYLIIDEAHKLKNENSQVSGTARAMNADHRLLLTGTPLQNNLHELWALLNILLPDVFADASQFSEFFNLDTGDTDAKKTVITQLHKILRPFMLRRLKSDAAKELPPKTETILYTRLSDMQRRLYRDLLMRNIDCVNSTGAGIQRTALLNIVMQLRKCCNHPYLFPGMEDRSLDPLGEHLVDACGKVKLLDKLLSRLKERGHRVLVFSQMTRMLDILEDLMHMRGHEYCRIDGDTSYDQRDELIDAYNAPNSTKFCFLLSTRAGGLGINLQTADVVILFDSDWNPQ 414
BLAST of mRNA_Ecto-sp13_S_contig1675.4837.1 vs. uniprot
Match: W7TKM9_9STRA (Putative chromatin remodelling complex atpase chain (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKM9_9STRA) HSP 1 Score: 593 bits (1529), Expect = 2.390e-199 Identity = 294/442 (66.52%), Postives = 348/442 (78.73%), Query Frame = 3
Query: 906 ADEAMDDVNGEDTAPTYLTKQPPSISGGTMRSYQLEGLNWMVNLQAQGTNGILADEMGLGKTLQSISILAYMRDFQNVTGPHIILLPKSVLGNWQLEFKRFCPDIRVLRLSGTKDERAAIIRNDLKPGSPEDERDWDVLVTTYEVANIEKTSLNKIGWRYLIIDEAHRLKNESSLFSMTVRELTTQYRLLLTGTPLQNNLHELWALLNFLLPTVFQDSEAFSKVFDLNVDDADKKQNMIKQLHKILRPFMLRRLKKEVEKSLPPKEETILFTSMSEVQRKVYKGVLMRDIDTINGT-SAGRTAILNIVMQLRKCCNHPYLFPNTEDRNLDPMGEHLVENCGKMILLDKLLTRLKAAGHRVLVFSQMTRMMDILEDLMHMREYKYCRIDGNTPHDTRQDLIEEYNAPGSEKFIFLLSTRAGGLGINLQSADTCILYDSDWNPQ 2228
ADE D G + +L QPPSI G +R YQLEGLNWM+ LQ G NGILADEMGLGKTLQSIS+LAY +F N TGPH+IL+PKS L NW EF+++CP +RVLR G+KDERA +I L PG+ ERDWDVL+TTYE+ N+EK +L+K W+YLIIDEAHRLKNE+S FS TVR L T +RLL+TGTPLQNNLHELWALLNFLLP VF S+ F F+L +DDA++KQ +I QLHKILRPFMLRRLK +VEKSLP K ET++F M QR YK +L RD+ I G+ +AGRTA+LN+VMQLRK CNHPYLF EDR LDP+G+H+++NCGKM LLDKLL +LK GHRVLVF QMTRM+DILED M+MR + YCRIDGNT ++ R++LI+ YNAP S KF FLLSTRAGGLGINLQ+ADT ILYDSDWNPQ
Sbjct: 240 ADEDEDMEGGPEAH--FLLAQPPSIKHGQLRPYQLEGLNWMIRLQDNGINGILADEMGLGKTLQSISVLAYNAEFLNTTGPHLILVPKSTLSNWCNEFRKWCPSLRVLRFHGSKDERADLIAERLSPGT---ERDWDVLLTTYEICNLEKGALSKFAWQYLIIDEAHRLKNEASQFSQTVRMLKTAHRLLITGTPLQNNLHELWALLNFLLPDVFSSSDQFDDWFNLEIDDAEQKQRLITQLHKILRPFMLRRLKADVEKSLPKKTETLVFCEMMPTQRDTYKKILERDLSVIAGSETAGRTAVLNLVMQLRKACNHPYLFTGVEDRTLDPLGDHVIKNCGKMYLLDKLLKKLKEKGHRVLVFCQMTRMLDILEDFMYMRGHSYCRIDGNTSYEERENLIDTYNAPNSSKFAFLLSTRAGGLGINLQTADTVILYDSDWNPQ 676
BLAST of mRNA_Ecto-sp13_S_contig1675.4837.1 vs. uniprot
Match: A0A835YGX5_9STRA (Putative chromatin remodelling complex ATPase chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGX5_9STRA) HSP 1 Score: 607 bits (1564), Expect = 2.720e-196 Identity = 294/431 (68.21%), Postives = 348/431 (80.74%), Query Frame = 3
Query: 951 TYLTKQPPSISGGTMRSYQLEGLNWMVNLQAQGTNGILADEMGLGKTLQSISILAYMRDFQNVTGPHIILLPKSVLGNWQLEFKRFCPDIRVLRLSGTKDERAAIIRNDLKPGSPEDERDWDVLVTTYEVANIEKTSLNKIGWRYLIIDEAHRLKNESSLFSMTVRELTTQYRLLLTGTPLQNNLHELWALLNFLLPTVFQDSEAFSKVFDLNVDDADKKQNMIKQLHKILRPFMLRRLKKEVEKSLPPKEETILFTSMSEVQRKVYKGVLMRDIDTINGT-----SAGRTAILNIVMQLRKCCNHPYLFPNTEDRNLDPMGEHLVENCGKMILLDKLLTRLKAAGHRVLVFSQMTRMMDILEDLMHMREYKYCRIDGNTPHDTRQDLIEEYNAPGSEKFIFLLSTRAGGLGINLQSADTCILYDSDWNPQ 2228
T+LT QP I+ G +R YQLEGLNWM+ L A G NGILADEMGLGKTLQSISILAYM + + + GPHI+L+PKS L NW EF R+CP +R +R GT++ERA + L+PG+ + +R WDVLVTTYEVAN+EK L K WRYLIIDEAHRLKNE+SLFS TVR L Q+RLLLTGTPLQNNLHELWALLNFLLP VF +E F + F+L +DD + K+ MI+QLHKILRPFMLRRLK +VEKSLPPK ETILF MS Q++VY+ +L+RDID +NGT +AGRTAILNIVMQLRKCCNHPYLF EDR+ DP+GEHL++NCGKM+LL KLL +LK G+RVL+FSQMTRM+DILED MR Y+YCRIDG+T ++ R+D I+ YN P S KFIF+LSTRAGGLGINLQ+ADT ILYDSDWNPQ
Sbjct: 271 TFLTAQPACITFGKLRHYQLEGLNWMIRLNANGINGILADEMGLGKTLQSISILAYMYEHKGIRGPHIVLVPKSTLSNWMNEFARWCPVLRAIRFHGTREERAEQVETVLRPGARDGDRSWDVLVTTYEVANMEKKVLQKFAWRYLIIDEAHRLKNEASLFSQTVRSLNMQHRLLLTGTPLQNNLHELWALLNFLLPDVFSSAEQFDEWFNLEIDDKEAKERMIQQLHKILRPFMLRRLKADVEKSLPPKNETILFVGMSYKQKEVYRNILLRDIDAVNGTGGGGGAAGRTAILNIVMQLRKCCNHPYLFAGVEDRSQDPLGEHLIQNCGKMVLLSKLLGKLKERGNRVLIFSQMTRMLDILEDFCLMRRYEYCRIDGSTSYEDREDFIDAYNRPNSSKFIFMLSTRAGGLGINLQTADTVILYDSDWNPQ 701
BLAST of mRNA_Ecto-sp13_S_contig1675.4837.1 vs. uniprot
Match: B8BXR2_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXR2_THAPS) HSP 1 Score: 583 bits (1503), Expect = 3.140e-196 Identity = 283/432 (65.51%), Postives = 343/432 (79.40%), Query Frame = 3
Query: 954 YLTKQPPSISGGTMRSYQLEGLNWMVNLQAQGTNGILADEMGLGKTLQSISILAYMRDFQNVTGPHIILLPKSVLGNWQLEFKRFCPDIRVLRLSGTKDERAAIIRNDLKPGSPEDE-----RDWDVLVTTYEVANIEKTSLNKIGWRYLIIDEAHRLKNESSLFSMTVRELTTQYRLLLTGTPLQNNLHELWALLNFLLPTVFQDSEAFSKVFDLNVDDADKKQNMIKQLHKILRPFMLRRLKKEVEKSLPPKEETILFTSMSEVQRKVYKGVLMRDIDTING--TSAGRTAILNIVMQLRKCCNHPYLFPNTEDRNLDPMGEHLVENCGKMILLDKLLTRLKAAGHRVLVFSQMTRMMDILEDLMHMREYKYCRIDGNTPHDTRQDLIEEYNAPGSEKFIFLLSTRAGGLGINLQSADTCILYDSDWNPQ 2228
+LTKQP I GT++ YQLEGLNWM++L +G NGILADEMGLGKTLQSISILAY ++ + GPH+I +PKS L NW E R+CP +R +R G K+ER A+ + K G ED+ R WDV VTTYEVAN E+ +L + W+YL+IDEAHRLKNE+S+FS TVR T +RLLLTGTPLQNNLHELWALLNFLLP +F SE F + F+L +DDAD K+ MI+QLHKILRPFM+RRLK +V K LPPK ET+L MS++Q+++YK +L+RDI+ I G TS+G+TAILNIVMQLRKCCNHPYLF EDR LDP+GEHLVENCGK+ ++DKLL RLK G RVL+F+QMTR++DILED M MR YKYCRIDGNT ++ R+ I+E+NAP SEKF F+LSTRAGGLGINLQ+ADTCILYDSDWNPQ
Sbjct: 3 FLTKQPNCIKFGTLKPYQLEGLNWMIHLAEKGLNGILADEMGLGKTLQSISILAYHYEYLKIQGPHLICVPKSTLSNWMNELNRWCPSLRAIRFHGGKEEREALSEENEKTGEMEDDNSDNPRAWDVCVTTYEVANTERKALGRFAWKYLVIDEAHRLKNEASIFSTTVRNFNTSHRLLLTGTPLQNNLHELWALLNFLLPDIFSSSEQFDEWFNLEIDDADAKKTMIEQLHKILRPFMIRRLKSDVAKGLPPKTETLLMVGMSKMQKQLYKKLLLRDIEAITGKNTSSGKTAILNIVMQLRKCCNHPYLFEGVEDRTLDPLGEHLVENCGKLNMVDKLLKRLKERGSRVLIFTQMTRILDILEDYMVMRGYKYCRIDGNTDYEDRERGIDEFNAPNSEKFCFILSTRAGGLGINLQTADTCILYDSDWNPQ 434
BLAST of mRNA_Ecto-sp13_S_contig1675.4837.1 vs. uniprot
Match: A0A7S1BX47_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BX47_9STRA) HSP 1 Score: 605 bits (1559), Expect = 1.030e-195 Identity = 289/428 (67.52%), Postives = 348/428 (81.31%), Query Frame = 3
Query: 954 YLTKQPPSISGGTMRSYQLEGLNWMVNLQAQGTNGILADEMGLGKTLQSISILAYMRDFQNVTGPHIILLPKSVLGNWQLEFKRFCPDIRVLRLSGTKDERAAIIRNDLKPGSPEDERDWDVLVTTYEVANIEKTSLNKIGWRYLIIDEAHRLKNESSLFSMTVRELTTQYRLLLTGTPLQNNLHELWALLNFLLPTVFQDSEAFSKVFDLNVDDADKKQNMIKQLHKILRPFMLRRLKKEVEKSLPPKEETILFTSMSEVQRKVYKGVLMRDIDTINGTSA---GRTAILNIVMQLRKCCNHPYLFPNTEDRNLDPMGEHLVENCGKMILLDKLLTRLKAAGHRVLVFSQMTRMMDILEDLMHMREYKYCRIDGNTPHDTRQDLIEEYNAPGSEKFIFLLSTRAGGLGINLQSADTCILYDSDWNPQ 2228
+LT QP ++ GTMR+YQ+EGLNWM+ LQ G NGILADEMGLGKTLQSIS+L YM +FQ++ GPH+I++PKS L NW E KR+ P +R LR G+K++R II LKPG+ +DERDWD+ VTTYEV N EK +++KI W YLIIDEAHRLKNE+S FS TVR T+YRLLLTGTPLQNNLHELWALLNFL+P VF S+ F + F+L+ +D + K +I QLHKILRPFMLRRLK +VEKSLPPK ETIL+ MS++Q+K+YK +LMRDID I G A G+TA+LNIVMQLRKC HPYLFP EDR L P+GEHLVENCGKM+LLDKLL RLK GHRVLVF+QMT+++DILED + MR ++YCRIDGNT +D R+D I+++NAP SEKF+FLLSTRAGGLGINLQ+AD ILYDSDWNPQ
Sbjct: 209 FLTSQPTTLGFGTMRAYQVEGLNWMIGLQENGVNGILADEMGLGKTLQSISVLVYMLEFQDIPGPHLIVVPKSTLSNWMNEIKRWAPTLRGLRFHGSKEDRQNIIETRLKPGAADDERDWDICVTTYEVVNTEKNTISKIAWHYLIIDEAHRLKNEASAFSQTVRTFETRYRLLLTGTPLQNNLHELWALLNFLVPDVFASSDQFDEWFNLDTEDTEAKNKLIMQLHKILRPFMLRRLKADVEKSLPPKHETILYCGMSKIQKKLYKDILMRDIDLIQGNGAKGTGKTAVLNIVMQLRKCAGHPYLFPGVEDRTLPPLGEHLVENCGKMVLLDKLLCRLKEKGHRVLVFTQMTKVLDILEDYLVMRRFQYCRIDGNTSYDVREDSIDKFNAPNSEKFLFLLSTRAGGLGINLQTADIVILYDSDWNPQ 636
BLAST of mRNA_Ecto-sp13_S_contig1675.4837.1 vs. uniprot
Match: B8C4D6_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C4D6_THAPS) HSP 1 Score: 592 bits (1527), Expect = 1.320e-195 Identity = 285/428 (66.59%), Postives = 343/428 (80.14%), Query Frame = 3
Query: 951 TYLTKQPPSISGGTMRSYQLEGLNWMVNLQAQGTNGILADEMGLGKTLQSISILAYMRDFQNVTGPHIILLPKSVLGNWQLEFKRFCPDIRVLRLSGTKDERAAIIRNDLKPGSPEDERDWDVLVTTYEVANIEKTSLNKIGWRYLIIDEAHRLKNESSLFSMTVRELTTQYRLLLTGTPLQNNLHELWALLNFLLPTVFQDSEAFSKVFDLNVDDADKKQNMIKQLHKILRPFMLRRLKKEVEKSLPPKEETILFTSMSEVQRKVYKGVLMRDIDTINGT--SAGRTAILNIVMQLRKCCNHPYLFPNTEDRNLDPMGEHLVENCGKMILLDKLLTRLKAAGHRVLVFSQMTRMMDILEDLMHMREYKYCRIDGNTPHDTRQDLIEEYNAPGSEKFIFLLSTRAGGLGINLQSADTCILYDSDWNPQ 2228
TYLT QP ++ GG MR YQLEGLNWM+ LQ G NGILADEMGLGKT+QSISIL YM +++ TGPH+I++PKS L NW E R+ P + ++ GTKDER I N L+PG +++R W+V VTTYEV N+E+ NK W YLIIDEAHRLKNE+S FS VR L T++RLLLTGTPLQNNLHELWALLNFL+P VF ++ F + F+L++DDAD+K +I QLHKILRPFMLRRLK +VEKSLPPK E ILFT MS +Q+K+YK +LMRD+DT+ G S RTA+LNIVMQLRKC HPYLFP EDR+L P+GEHLVEN GKM+LLDKLL RLK GHRVL+F+QMTR++DILED MHMR ++YCRIDGNT ++ R++ I+EYN P SEKF+FLLSTRAGGLGINLQ+AD IL+DSDWNPQ
Sbjct: 127 TYLTMQPSTLGGGKMRQYQLEGLNWMIRLQENGVNGILADEMGLGKTMQSISILVYMLEYKQDTGPHLIIVPKSTLSNWMNELARWGPKLNAVKFHGTKDERLDIAENILQPGQKDEKRKWNVCVTTYEVCNLERNVFNKFAWSYLIIDEAHRLKNEASTFSKIVRTLETRFRLLLTGTPLQNNLHELWALLNFLVPDVFASADQFDEWFNLDIDDADEKNKLISQLHKILRPFMLRRLKADVEKSLPPKTEMILFTGMSAMQKKLYKDILMRDVDTLTGKGGSGSRTAVLNIVMQLRKCAGHPYLFPGIEDRSLPPLGEHLVENSGKMVLLDKLLIRLKERGHRVLLFTQMTRILDILEDYMHMRGFQYCRIDGNTTYEDREERIDEYNKPDSEKFLFLLSTRAGGLGINLQTADVVILFDSDWNPQ 554
BLAST of mRNA_Ecto-sp13_S_contig1675.4837.1 vs. uniprot
Match: A0A7R9YFY7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YFY7_9STRA) HSP 1 Score: 603 bits (1555), Expect = 2.060e-194 Identity = 290/443 (65.46%), Postives = 356/443 (80.36%), Query Frame = 3
Query: 906 ADEAMDDVNGEDTAPTYLTKQPPSISGGTMRSYQLEGLNWMVNLQAQGTNGILADEMGLGKTLQSISILAYMRDFQNVTGPHIILLPKSVLGNWQLEFKRFCPDIRVLRLSGTKDERAAIIRNDLKPGSPEDERDWDVLVTTYEVANIEKTSLNKIGWRYLIIDEAHRLKNESSLFSMTVRELTTQYRLLLTGTPLQNNLHELWALLNFLLPTVFQDSEAFSKVFDLNVDDADKKQNMIKQLHKILRPFMLRRLKKEVEKSLPPKEETILFTSMSEVQRKVYKGVLMRDIDTI-NGTSAGRTAILNIVMQLRKCCNHPYLFPNTEDRNLDPMGEHLVENCGKMILLDKLLTRLKAAGHRVLVFSQMTRMMDILEDLMHMREYKYCRIDGNTPHDTRQDLIEEYNAPGSEKFIFLLSTRAGGLGINLQSADTCILYDSDWNPQV 2231
A +A D + ++ T+L +QP ++ G +R YQLEGLNW++ LQ G NGILADEMGLGKTLQSISILAYM +++ + GPH+IL+PKS L NW EF++FCP +R +R G+K+ER + N +KPG+P E WDVLVTTYE+ANIEK ++K W+YLIIDEAHRLKNE+S FS TVR + +YRLL+TGTPLQNNLHELWALLNFLLP VF ++ F + FDL+VDD + K+ MIKQLHK+LRPFMLRRLK +VEK+LPPK ETILFT MS VQ+ +YKG+L RD+D I G+T ++NIVMQLRK CNHPYLFP E+R+LDP+GEHLV NCGKM+LLDKLLT LKA GHRVL+F+QMTR +DILEDLM+MR Y YCRIDGNT ++ R+D I+ +NA GS F F+LSTRAGGLGINLQ+ADTCILYDSDWNPQ+
Sbjct: 221 AAQADDSESSDNRDDTFLLRQPRNLQG-QLRPYQLEGLNWLIRLQENGVNGILADEMGLGKTLQSISILAYMLEYRKIRGPHLILVPKSTLSNWMNEFRKFCPSLRPVRFHGSKEERRDLAENVIKPGAPVSELSWDVLVTTYEIANIEKNVISKFAWQYLIIDEAHRLKNEASTFSRTVRGFSMRYRLLITGTPLQNNLHELWALLNFLLPDVFASADQFDEWFDLDVDDEEAKERMIKQLHKLLRPFMLRRLKVDVEKTLPPKSETILFTGMSAVQKDLYKGILRRDVDAILEANKTGKTQLMNIVMQLRKVCNHPYLFPGVENRSLDPLGEHLVTNCGKMVLLDKLLTALKARGHRVLIFTQMTRQLDILEDLMNMRAYSYCRIDGNTNYEDREDQIDAFNAAGSGIFAFILSTRAGGLGINLQTADTCILYDSDWNPQM 662 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1675.4837.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1675.4837.1 >prot_Ecto-sp13_S_contig1675.4837.1 ID=prot_Ecto-sp13_S_contig1675.4837.1|Name=mRNA_Ecto-sp13_S_contig1675.4837.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=675bp MSGSGAEVYGAPVKAATSAYMFFQGDQYSNHKDEFAGLALGQQGAEISRRback to top mRNA from alignment at Ecto-sp13_S_contig1675:87..7414- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1675.4837.1 ID=mRNA_Ecto-sp13_S_contig1675.4837.1|Name=mRNA_Ecto-sp13_S_contig1675.4837.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7328bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1675:87..7414- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1675:87..7414- >mRNA_Ecto-sp13_S_contig1675.4837.1 ID=mRNA_Ecto-sp13_S_contig1675.4837.1|Name=mRNA_Ecto-sp13_S_contig1675.4837.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2025bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1675:87..7414- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |