prot_Ecto-sp13_S_contig1674.4828.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1674.4828.1
Unique Nameprot_Ecto-sp13_S_contig1674.4828.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length240
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1674.4828.1 vs. uniprot
Match: D8LIW0_ECTSI (PPM-type phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIW0_ECTSI)

HSP 1 Score: 279 bits (714), Expect = 1.420e-89
Identity = 188/267 (70.41%), Postives = 196/267 (73.41%), Query Frame = 0 
Query:    1 MTIVLADLRRRRRRARPKASPPKLSPTMGGGYGGDENRGGVVAA-IGAPRVGNRGGAEAAPTV---------AAAVTATA------------------GAGDKGDLGPSVRVGDRDGSVGGSAVSVSTGGGDPVVDGSVAAAAAEAGADSREALRQDGGGYGVGANDGSSLAGHVGDGRGGSSGTRPGESAGVSGLTAGGGGVNNTSKIAVEPGGVAVSGIEGVSGKTSTGGAAAAVVGDGVGETLTAREAGGLLRPPEAVDGNQER 239
            MTIVLADLRRRRRRARPK SPPKLSPT+G G GG E+RGGV AA IGAP +GNRGG EA PTV           A TATA                  GAGDKGD GPS+RV   D SVGGSAVS             VAAAAAEAG  +REALRQ+ GG GVGA DGS LAGHVGDGR GSS TRPG+SAGVSGLTAGGGG NNTSKIAVEPGGVAVSG+ GVSGKTSTGGAAA V GDGVGE LT REAGGLLRPPEAVDGNQER
Sbjct:  149 MTIVLADLRRRRRRARPKVSPPKLSPTIGEGRGGVEDRGGVAAAAIGAPLLGNRGGTEAVPTVXXXXXPAAVVGASTATAXXXXXXXXXXXXXXXXXAGAGDKGDFGPSMRVSGGDSSVGGSAVSXXXXXXXXXXXXXVAAAAAEAGVGTREALRQNAGGDGVGAGDGSFLAGHVGDGRDGSSRTRPGQSAGVSGLTAGGGGANNTSKIAVEPGGVAVSGVVGVSGKTSTGGAAAVVEGDGVGEALTVREAGGLLRPPEAVDGNQER 415
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1674.4828.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LIW0_ECTSI1.420e-8970.41PPM-type phosphatase domain-containing protein n=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 239..239

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1674contigEcto-sp13_S_contig1674:1482..2201 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1674.4828.1mRNA_Ecto-sp13_S_contig1674.4828.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1674 1188..3481 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1674.4828.1 ID=prot_Ecto-sp13_S_contig1674.4828.1|Name=mRNA_Ecto-sp13_S_contig1674.4828.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=240bp
MTIVLADLRRRRRRARPKASPPKLSPTMGGGYGGDENRGGVVAAIGAPRV
GNRGGAEAAPTVAAAVTATAGAGDKGDLGPSVRVGDRDGSVGGSAVSVST
GGGDPVVDGSVAAAAAEAGADSREALRQDGGGYGVGANDGSSLAGHVGDG
RGGSSGTRPGESAGVSGLTAGGGGVNNTSKIAVEPGGVAVSGIEGVSGKT
STGGAAAAVVGDGVGETLTAREAGGLLRPPEAVDGNQER*
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