prot_Ecto-sp13_S_contig1673.4822.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1673.4822.1
Unique Nameprot_Ecto-sp13_S_contig1673.4822.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length578
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1673.4822.1 vs. uniprot
Match: D7G0P0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0P0_ECTSI)

HSP 1 Score: 359 bits (922), Expect = 8.020e-119
Identity = 182/193 (94.30%), Postives = 183/193 (94.82%), Query Frame = 0 
Query:    1 YGDGFGWKFLIDATLTATRIRGNPLEEIVVLTTDLMLAGEDSANEARFFSQTVEALGTQQTPRVPRISLVFVEVVGSYSCSVGGAGASDPLTGWNGLQRLREVAKDRGRAFALDLIDNTAAMFDSQLRCWLRDSSPRQACSLRLPATETFSGVVIEVEMTHYLLDQSRVLPRSSSGSPASLLHKGFSNMKVVQ 193
            YGDGFGWKFLIDATLTATRIR   LEEIVVLTTDLMLAGEDSANEARFFSQT EALGTQQ P VPRISLVFVEVVGS SCSVGGAGASDPLTGWNGLQRLRE AKDRGRAFALDLIDNTAAMFDSQLRCWLRDSSPRQACSLRLPATETFSGV IEVEMTHYLLDQSRVLP+SS GSPASLLHKGFSNMKVVQ
Sbjct:    9 YGDGFGWKFLIDATLTATRIRERALEEIVVLTTDLMLAGEDSANEARFFSQTAEALGTQQAPPVPRISLVFVEVVGSSSCSVGGAGASDPLTGWNGLQRLREGAKDRGRAFALDLIDNTAAMFDSQLRCWLRDSSPRQACSLRLPATETFSGVTIEVEMTHYLLDQSRVLPKSSPGSPASLLHKGFSNMKVVQ 201
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BLAST of mRNA_Ecto-sp13_S_contig1673.4822.1 vs. uniprot
Match: A0A6H5JUM8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUM8_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 4.270e-40
Identity = 88/113 (77.88%), Postives = 88/113 (77.88%), Query Frame = 0 
Query:    1 YGDGFGWKFLIDATLTATRIRGNPLEEIVVLTTDLMLAGEDSANEARFFSQTVEALGTQQTPRVPRISLVFVEVVGSYSCSVGGAGASDPLTGWNGLQRLREVAKDRGRAFAL 113
            YGDGFGWKFLIDATLTATRIRGNPLEE                  ARFFSQT EALGTQQ P V RISLVFVEVVGS SCSVGGAGASD LTGWNGLQRLRE AKDRGRAFAL
Sbjct:   14 YGDGFGWKFLIDATLTATRIRGNPLEE------------------ARFFSQTSEALGTQQGPPVRRISLVFVEVVGSSSCSVGGAGASDSLTGWNGLQRLREGAKDRGRAFAL 108
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1673.4822.1 vs. uniprot
Match: A0A6H5KGY8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGY8_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 2.870e-8
Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 0 
Query:    1 YGDGFGWKFLIDATLTATRIRGNPLEE 27
            YGDGFGWKFLIDATLTATRIRGNPL+E
Sbjct:   14 YGDGFGWKFLIDATLTATRIRGNPLKE 40
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1673.4822.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G0P0_ECTSI8.020e-11994.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JUM8_9PHAE4.270e-4077.88Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KGY8_9PHAE2.870e-896.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1673contigEcto-sp13_S_contig1673:10198..16170 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1673.4822.1mRNA_Ecto-sp13_S_contig1673.4822.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1673 10196..16170 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1673.4822.1 ID=prot_Ecto-sp13_S_contig1673.4822.1|Name=mRNA_Ecto-sp13_S_contig1673.4822.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=578bp
YGDGFGWKFLIDATLTATRIRGNPLEEIVVLTTDLMLAGEDSANEARFFS
QTVEALGTQQTPRVPRISLVFVEVVGSYSCSVGGAGASDPLTGWNGLQRL
REVAKDRGRAFALDLIDNTAAMFDSQLRCWLRDSSPRQACSLRLPATETF
SGVVIEVEMTHYLLDQSRVLPRSSSGSPASLLHKGFSNMKVVQGVRLDTL
DQGLCRGDPLLCIPSRIQGSRQQSQANRKLFMAVCAELNERDMGLLLSLR
HPSTSLEERWLLLPQTPPQDPAAPAAAALGAPRAQQGGPADAMPVDRGLL
IRLATKEEVLEEGEAVETNVNSISNVASELSVERAAASASLEVLDTGTYN
PLKHSSGLFELLASQRHQPQQGRTSTSGTAAAAPKTARAASNTGAGVDGM
SANRRLGCEPDRQQQQQQQQQKPQKHRRHQSSPSLSSATLPPSSSSSSIP
RRATIGGLGRRTKEGARGTSQHQQQQRQPAKIREVSLRFAETPQRQQQKQ
RQSGRGKSPTTGGGDAGVRVGGGGGEVGGNRGSKSESAVLTAVTSGGRPS
KRSGAPQGWRRKAKGSGREREGGARDRG
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