prot_Ecto-sp13_S_contig16568.4716.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16568.4716.1
Unique Nameprot_Ecto-sp13_S_contig16568.4716.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length231
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16568.4716.1 vs. uniprot
Match: D7FLR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLR8_ECTSI)

HSP 1 Score: 127 bits (318), Expect = 1.590e-33
Identity = 74/102 (72.55%), Postives = 78/102 (76.47%), Query Frame = 0 
Query:  130 MMVMAMNGDRSGXXXXXXXXXXXXXXXXXXEEYNDGTCGDRNCAFCCGREQRQSNYSTSCRLDGDEDDSGGPGASLGGVSSSVCTASTGTMSWYTQDRGSYE 231
            MM+MAMNGDRSG           XXXXXXX     GTCGDR C FC GRE  Q NYSTSC+LDGDEDD GGPGASLGGVSSSVCTASTGTMSWYTQ+RG Y+
Sbjct:    2 MMMMAMNGDRSGDHCENFDDENNXXXXXXX-----GTCGDRYCTFCSGREHGQRNYSTSCQLDGDEDDRGGPGASLGGVSSSVCTASTGTMSWYTQNRGYYQ 98
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16568.4716.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLR8_ECTSI1.590e-3372.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 83..129
NoneNo IPR availableCOILSCoilCoilcoord: 47..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16568contigEcto-sp13_S_contig16568:455..3807 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16568.4716.1mRNA_Ecto-sp13_S_contig16568.4716.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16568 455..3807 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16568.4716.1 ID=prot_Ecto-sp13_S_contig16568.4716.1|Name=mRNA_Ecto-sp13_S_contig16568.4716.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=231bp
KIEGQVTRGSITIMTWPQDEHRVGSRCNSEQCMGRTVAQEHCRVCQQQLE
QQAYHEEERQYQQLLEQRYRSSLPRQQHQQHQHQHQQELLRRHQQQQQQL
QQHQQHQQQQELLRRHQQQRQQQQQHQQQMMVMAMNGDRSGDRYENFDDN
DHDDDHDDEEEYNDGTCGDRNCAFCCGREQRQSNYSTSCRLDGDEDDSGG
PGASLGGVSSSVCTASTGTMSWYTQDRGSYE
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