prot_Ecto-sp13_S_contig16477.4669.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16477.4669.1
Unique Nameprot_Ecto-sp13_S_contig16477.4669.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length74
Homology
BLAST of mRNA_Ecto-sp13_S_contig16477.4669.1 vs. uniprot
Match: A0A6H5JI22_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI22_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 8.170e-28
Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 0
Query:    1 MATIVADDGWKGLYAGFQPRVVMSGLFTAVGFGSFEAIKAVLGVSPLPPNKATVAS 56
            MATIVADDGWKGLYAGFQPRVVMSGLFTAVGFGSFEAIKAVLGVSPLPP+KATVAS
Sbjct:  407 MATIVADDGWKGLYAGFQPRVVMSGLFTAVGFGSFEAIKAVLGVSPLPPDKATVAS 462          
BLAST of mRNA_Ecto-sp13_S_contig16477.4669.1 vs. uniprot
Match: D7G8X0_ECTSI (Mitochondrial carrier protein-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8X0_ECTSI)

HSP 1 Score: 106 bits (264), Expect = 7.810e-26
Identity = 51/56 (91.07%), Postives = 53/56 (94.64%), Query Frame = 0
Query:    1 MATIVADDGWKGLYAGFQPRVVMSGLFTAVGFGSFEAIKAVLGVSPLPPNKATVAS 56
            MATIVADDGWKGLYAGFQPRVVMSGLFTAVGFGSFEAIK VLGVSPLPP++AT  S
Sbjct:  279 MATIVADDGWKGLYAGFQPRVVMSGLFTAVGFGSFEAIKVVLGVSPLPPDEATADS 334          
BLAST of mRNA_Ecto-sp13_S_contig16477.4669.1 vs. uniprot
Match: A0A448Z9E8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z9E8_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.500e-8
Identity = 26/45 (57.78%), Postives = 33/45 (73.33%), Query Frame = 0
Query:    1 MATIVADDGWKGLYAGFQPRVVMSGLFTAVGFGSFEAIKAVLGVS 45
            M  +V + GWKGLYAG   RV+ SG F+A+GFG+FE +K  LGVS
Sbjct:  364 MLHVVGEVGWKGLYAGAGSRVLWSGAFSAIGFGTFELVKGYLGVS 408          
BLAST of mRNA_Ecto-sp13_S_contig16477.4669.1 vs. uniprot
Match: A0A836CFD2_9STRA (Mitochondrial carrier protein-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFD2_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 2.210e-7
Identity = 27/44 (61.36%), Postives = 34/44 (77.27%), Query Frame = 0
Query:    7 DDGWKGLYAGFQPRVVMSGLFTAVGFGSFEAIKAVLGVS--PLP 48
            + G +GLY G QPR+++S LFTAVGFGSFEA+K +L V   PLP
Sbjct:  254 EGGIRGLYVGAQPRMLLSSLFTAVGFGSFEAMKTLLQVDDHPLP 297          
BLAST of mRNA_Ecto-sp13_S_contig16477.4669.1 vs. uniprot
Match: A0A7S4ARV8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ARV8_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 2.500e-7
Identity = 25/44 (56.82%), Postives = 31/44 (70.45%), Query Frame = 0
Query:    1 MATIVADDGWKGLYAGFQPRVVMSGLFTAVGFGSFEAIKAVLGV 44
            M  +V + GWKGLYAG   RV+ SG F+A+GFG+FE  K  LGV
Sbjct:  356 MLHVVREVGWKGLYAGAGSRVLWSGAFSAIGFGTFELAKGCLGV 399          
BLAST of mRNA_Ecto-sp13_S_contig16477.4669.1 vs. uniprot
Match: B7FU35_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FU35_PHATC)

HSP 1 Score: 50.8 bits (120), Expect = 9.810e-6
Identity = 21/36 (58.33%), Postives = 27/36 (75.00%), Query Frame = 0
Query:    1 MATIVADDGWKGLYAGFQPRVVMSGLFTAVGFGSFE 36
            M  I+A+ GWKGLYAG   R++ SG F ++GFGSFE
Sbjct:  180 MNHIIAEQGWKGLYAGAGSRMLWSGAFASIGFGSFE 215          
BLAST of mRNA_Ecto-sp13_S_contig16477.4669.1 vs. uniprot
Match: A0A4D9D8F7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8F7_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 1.020e-5
Identity = 25/41 (60.98%), Postives = 30/41 (73.17%), Query Frame = 0
Query:    4 IVADDGWKGLYAGFQPRVVMSGLFTAVGFGSFEAIKAVLGV 44
            +   +G  GLYAG + RV+ S LFTAVGF SFEA KA+LGV
Sbjct:  264 VAQKEGVPGLYAGVRFRVMYSALFTAVGFSSFEASKALLGV 304          
BLAST of mRNA_Ecto-sp13_S_contig16477.4669.1 vs. uniprot
Match: W7TPC7_9STRA (S-adenosylmethionine carrier 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPC7_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 1.070e-5
Identity = 25/41 (60.98%), Postives = 30/41 (73.17%), Query Frame = 0
Query:    4 IVADDGWKGLYAGFQPRVVMSGLFTAVGFGSFEAIKAVLGV 44
            +   +G  GLYAG + RV+ S LFTAVGF SFEA KA+LGV
Sbjct:  371 VAQKEGVPGLYAGVRFRVMYSALFTAVGFSSFEASKALLGV 411          
BLAST of mRNA_Ecto-sp13_S_contig16477.4669.1 vs. uniprot
Match: A0A7R9WVA4_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WVA4_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 5.140e-5
Identity = 22/42 (52.38%), Postives = 31/42 (73.81%), Query Frame = 0
Query:    4 IVADDGWKGLYAGFQPRVVMSGLFTAVGFGSFEAIKAVLGVS 45
            +V + G +GL+ G   R+V SG F+A+GFG+FE +K VLGVS
Sbjct:  401 VVDEVGVRGLWTGAGSRMVFSGAFSAIGFGTFELVKDVLGVS 442          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16477.4669.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5JI22_9PHAE8.170e-2898.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8X0_ECTSI7.810e-2691.07Mitochondrial carrier protein-like n=1 Tax=Ectocar... [more]
A0A448Z9E8_9STRA1.500e-857.78Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A836CFD2_9STRA2.210e-761.36Mitochondrial carrier protein-like protein n=1 Tax... [more]
A0A7S4ARV8_9STRA2.500e-756.82Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
B7FU35_PHATC9.810e-658.33Predicted protein (Fragment) n=2 Tax=Phaeodactylum... [more]
A0A4D9D8F7_9STRA1.020e-560.98Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TPC7_9STRA1.070e-560.98S-adenosylmethionine carrier 1 n=1 Tax=Nannochloro... [more]
A0A7R9WVA4_9STRA5.140e-552.38Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023395Mitochondrial carrier domain superfamilyGENE3D1.50.40.10coord: 1..71
e-value: 7.2E-10
score: 40.0
IPR023395Mitochondrial carrier domain superfamilySUPERFAMILY103506Mitochondrial carriercoord: 3..69
IPR018108Mitochondrial substrate/solute carrierPFAMPF00153Mito_carrcoord: 3..42
e-value: 6.4E-6
score: 26.0
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 1..41
score: 10.864

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16477contigEcto-sp13_S_contig16477:30..1018 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16477.4669.1mRNA_Ecto-sp13_S_contig16477.4669.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16477 2..2255 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16477.4669.1 ID=prot_Ecto-sp13_S_contig16477.4669.1|Name=mRNA_Ecto-sp13_S_contig16477.4669.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=74bp
MATIVADDGWKGLYAGFQPRVVMSGLFTAVGFGSFEAIKAVLGVSPLPPN
KATVASSSSSSSAAAAAATTRRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023395Mt_carrier_dom_sf
IPR018108Mitochondrial_sb/sol_carrier