prot_Ecto-sp13_S_contig16468.4661.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16468.4661.1
Unique Nameprot_Ecto-sp13_S_contig16468.4661.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length763
Homology
BLAST of mRNA_Ecto-sp13_S_contig16468.4661.1 vs. uniprot
Match: D7FH97_ECTSI (Similar to chromosome fragility associated gene 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH97_ECTSI)

HSP 1 Score: 333 bits (853), Expect = 3.480e-94
Identity = 383/749 (51.13%), Postives = 407/749 (54.34%), Query Frame = 0
Query:   24 VPPLRPSNGQDTPAAAPAVGMKKPIPP--ATGTKRKGKLRLPSAKTKGVSGKGGXXXXXXXGQDAAPAVATLAADXXXXXXXXXXXXXXXXXXXXXXXXGCGADQTPSTESKKTKKK-QASVWEGCGFTGVGEPPSVASAPVDAADDDEDAATGASAAGTVAADIATGSRDVVGAA--DDAADSPAADDDVADGGAKVGPGREETSDLSSPCPVKPSSTGWKRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------GGMPAVSERRVPSDEVPAKQNDDLGGEGSDAAVPGAAXXXXXXXXXXXXXXXXXXXXXXTEPTVAEAVTQEVEPRASDTETGGAGRGRKHGDDVPVAADPWTPESTPVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAVAPVASNVGTAAVASPLGRVSKRVAARAAEQAKXXXXXXXXXXXXXXXXLEAKARRKEXXXXXXXXXXXXXXXXXXXXXXIISGDFPPVVSGDSLPASHKKGVTIGMTTPTEGVPHGPKTRVILGNIPPAAGTAGKPAKLASIFLPRAGGLGSAAPAAGPKLAPLFMPKRKASPETIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGRKEASLPSSAAPPSIEV 761
            VPPLRP+NGQDTPAA              ATGTK+KGKLRLPS +TKG +GKGG       G+ AAPA AT    XXXXXXXXXXXXXXXXXXXXXXXXGCGA   P+TESK      QASVWEGCGFTGVGEP S ASAP DAA DD+DAATGASA+G VAA               DDAA+SPAA+DDVADGGAKVGPG+EETS+LSSPCPV+PSSTG KR XXXXXXX               XXXXXXXXXX        GGMPAVSER V S  VPAKQNDDLG +G DAAVPGAA     XXXXX             EP V EAVT++  PRASDTE       +++G DVPVAADP TPESTPVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                                                                                                                                                  IISGD P VVSGD LP SHKKG   GMTT  EGVPH PKTRVI GNIPPAAGTAGKPAKLASIFLPRAGG G AAPAAGPKLAPLF+PKRKASPET+     XXXXXXXXXXXXXXXXX         SGRK+ASLPSS +PPSIE+
Sbjct:   70 VPPLRPNNGQDTPAAXXXXXXXXXXXXXXATGTKKKGKLRLPSRRTKGGAGKGG-------GEGAAPAAATSXXXXXXXXXXXXXXXXXXXXXXXXXXXGCGAALAPTTESKXXXXXXQASVWEGCGFTGVGEPLSAASAPADAAGDDKDAATGASASGAVAAXXXXXXXXXXXXXXXDDAAESPAANDDVADGGAKVGPGQEETSELSSPCPVEPSSTGQKRXXXXXXXXHAESARSETPGGCARXXXXXXXXXXPPLEGDDDGGMPAVSERLVLSATVPAKQNDDLGVDGGDAAVPGAAAITAAXXXXXEGAAPLAVAAI--EPAVGEAVTEQAVPRASDTE-------KENGGDVPVAADPGTPESTPVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IISGDCPTVVSGDPLPTSHKKGAATGMTTSAEGVPHAPKTRVIPGNIPPAAGTAGKPAKLASIFLPRAGGWGGAAPAAGPKLAPLFVPKRKASPETVSDVGGXXXXXXXXXXXXXXXXX---------SGRKKASLPSSVSPPSIEI 599          
BLAST of mRNA_Ecto-sp13_S_contig16468.4661.1 vs. uniprot
Match: A0A6H5KGC2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGC2_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 6.020e-44
Identity = 153/183 (83.61%), Postives = 156/183 (85.25%), Query Frame = 0
Query:  587 KARRKEXXXXXXXXXXXXXXXXXXXXXXIISGDFPPVVSGDSLPASHKKGVTIGMTTPTEGVPHGPKTRVILGNIPPAAGTAGKPAKLASIFLPRAGGLGSAAPAAGPKLAPLFMPKRKASPETIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------SGRKEASLPSSAAPPSIEV 761
            KARRKEXXXXXXXXXXXXXXXX      IISGD PPVVSGDSLPASHKKGVT GMTT TEGVPHGPKTRVI GNIPPAAGTAG PAKLASIFLPRAGG G AAPAAGPKLAPLFMPKRK SPET  G XXXXXXXXXXXXXXXXXXXXXXXXXXXX        SGRK+ASLPS+  PPSIE+
Sbjct:  161 KARRKEXXXXXXXXXXXXXXXXVAATTTIISGDSPPVVSGDSLPASHKKGVTTGMTTSTEGVPHGPKTRVIPGNIPPAAGTAGNPAKLASIFLPRAGGWGGAAPAAGPKLAPLFMPKRKPSPETFSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGRKKASLPSAVTPPSIEI 343          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16468.4661.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FH97_ECTSI3.480e-9451.13Similar to chromosome fragility associated gene 1 ... [more]
A0A6H5KGC2_9PHAE6.020e-4483.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 556..601

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16468contigEcto-sp13_S_contig16468:222..3073 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16468.4661.1mRNA_Ecto-sp13_S_contig16468.4661.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16468 222..3073 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16468.4661.1 ID=prot_Ecto-sp13_S_contig16468.4661.1|Name=mRNA_Ecto-sp13_S_contig16468.4661.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=763bp
GSGTGPAAAPPTPGITGTAGSSGVPPLRPSNGQDTPAAAPAVGMKKPIPP
ATGTKRKGKLRLPSAKTKGVSGKGGGGAGKGGGQDAAPAVATLAADAAAA
KSPKSATVRSPKARAARSPKGCGADQTPSTESKKTKKKQASVWEGCGFTG
VGEPPSVASAPVDAADDDEDAATGASAAGTVAADIATGSRDVVGAADDAA
DSPAADDDVADGGAKVGPGREETSDLSSPCPVKPSSTGWKRRAAGGGGGH
ADSARSETPGEGAAAAAATTTEDDNDGGMPAVSERRVPSDEVPAKQNDDL
GGEGSDAAVPGAAAVAVAAAATAAAEGAAPPAVAATEPTVAEAVTQEVEP
RASDTETGGAGRGRKHGDDVPVAADPWTPESTPVPPPPLAAAADGDDPEI
TTTAVAGDGSVAGAATAGDSVVSDAGVALAAAAAAAAAAAAAAAAAGSSK
ACSPGSGGSDGGVPGGGGAGAAPPAAGAAPPAARGGGAAAPPATAAAPPP
AAAAAGACAGSGAAPPAAVDDTVAASSGASAAGAVAPVASNVGTAAVASP
LGRVSKRVAARAAEQAKAAAAAAEAEAELAAAALEAKARRKEAAAAAKKS
KKKASKAAAAATTTIISGDFPPVVSGDSLPASHKKGVTIGMTTPTEGVPH
GPKTRVILGNIPPAAGTAGKPAKLASIFLPRAGGLGSAAPAAGPKLAPLF
MPKRKASPETIGGGSGGGGGGGGGGGGRRSGGGGEKEKEKEKSGRKEASL
PSSAAPPSIEVR*
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