prot_Ecto-sp13_S_contig1645.4650.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1645.4650.1
Unique Nameprot_Ecto-sp13_S_contig1645.4650.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length308
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1645.4650.1 vs. uniprot
Match: D8LD48_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD48_ECTSI)

HSP 1 Score: 329 bits (844), Expect = 1.860e-110
Identity = 232/255 (90.98%), Postives = 234/255 (91.76%), Query Frame = 0 
Query:   53 MAVFPRVQQQGRHVSRGGGRGTXXXXXXXXXXXXXXXPRRTATAKQRASSSARSSPRLHLTQKRTPANARRSSGPVGNRFASNQRQASSSTKAKGRTSSVGAHRDSSGDRTTXXXXXXXXXXXXXXXXXXXSSLADGVAKVMTDLKGDITAVIDKAMGKVEAECGTFVTTVLESCSAGVSGREEDDETAAAALREIETWQASMASRRSEMLKEVESNSSNLSAVVERCRAALDSLQQAESRTLKSGLDRATGTKS 307
            MAVFPRVQQQGRH SRGGGRGTXXXXXXXXXXXXXXX RRT TAK+RASSS RSSPRLHLTQKRTPANARR SGPVGNRFASNQRQ   STKAKGRTSSVGAHRDSSG    XXXXXXXXXXXXXXXXXXX S AD VAKVM DLKGD TAVIDKAMGKVEAECGTFV TVLESCSAGVSGREE DETAAAALREIET QAS+ASRRSEMLKEVESNSSNLSAVVERCRAALDSLQQAESR LKSGLDRATGTKS
Sbjct:    1 MAVFPRVQQQGRHGSRGGGRGTXXXXXXXXXXXXXXXXRRTVTAKKRASSSVRSSPRLHLTQKRTPANARRGSGPVGNRFASNQRQ---STKAKGRTSSVGAHRDSSGGXXXXXXXXXXXXXXXXXXXXXXXSPADDVAKVMIDLKGDSTAVIDKAMGKVEAECGTFVMTVLESCSAGVSGREEHDETAAAALREIETRQASLASRRSEMLKEVESNSSNLSAVVERCRAALDSLQQAESRKLKSGLDRATGTKS 252
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BLAST of mRNA_Ecto-sp13_S_contig1645.4650.1 vs. uniprot
Match: A0A6H5LLS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLS0_9PHAE)

HSP 1 Score: 228 bits (580), Expect = 1.690e-71
Identity = 152/165 (92.12%), Postives = 156/165 (94.55%), Query Frame = 0 
Query:  143 TKAKGRTSSVGAHRDSSGDRTTXXXXXXXXXXXXXXXXXXXSSLADGVAKVMTDLKGDITAVIDKAMGKVEAECGTFVTTVLESCSAGVSGREEDDETAAAALREIETWQASMASRRSEMLKEVESNSSNLSAVVERCRAALDSLQQAESRTLKSGLDRATGTKS 307
            TKAKGRTSSVGAHRDSSG RT XXXXXXXXXXXXXXXXXXXSS ADGVAK+M DLKGDITAVIDKAMGKVEAECGTFVTTVLESCSAGVSGREE  ETAAAALRE++T QASMASRRSEMLKEV SNSSNLSAVVERCRAALD+LQQAESR LKSGLDRATGTKS
Sbjct:   15 TKAKGRTSSVGAHRDSSGGRTXXXXXXXXXXXXXXXXXXXXSSPADGVAKLMIDLKGDITAVIDKAMGKVEAECGTFVTTVLESCSAGVSGREEHYETAAAALREMKTRQASMASRRSEMLKEVASNSSNLSAVVERCRAALDNLQQAESRKLKSGLDRATGTKS 179
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1645.4650.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LD48_ECTSI1.860e-11090.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LLS0_9PHAE1.690e-7192.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1645contigEcto-sp13_S_contig1645:9407..13579 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1645.4650.1mRNA_Ecto-sp13_S_contig1645.4650.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1645 8508..13582 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1645.4650.1 ID=prot_Ecto-sp13_S_contig1645.4650.1|Name=mRNA_Ecto-sp13_S_contig1645.4650.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=308bp
MPFLQPEAIRTRASRDGTLHQLTMPCEGRIVQYSVQPFNRYAYPTSGQRL
APMAVFPRVQQQGRHVSRGGGRGTASSSSSSVTATKTTTPRRTATAKQRA
SSSARSSPRLHLTQKRTPANARRSSGPVGNRFASNQRQASSSTKAKGRTS
SVGAHRDSSGDRTTSSKAAKAASAAAGGGARKKSSLADGVAKVMTDLKGD
ITAVIDKAMGKVEAECGTFVTTVLESCSAGVSGREEDDETAAAALREIET
WQASMASRRSEMLKEVESNSSNLSAVVERCRAALDSLQQAESRTLKSGLD
RATGTKS*
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