prot_Ecto-sp13_S_contig16430.4638.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16430.4638.1
Unique Nameprot_Ecto-sp13_S_contig16430.4638.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length100
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16430.4638.1 vs. uniprot
Match: A0A6H5KED6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KED6_9PHAE)

HSP 1 Score: 167 bits (422), Expect = 8.690e-50
Identity = 84/96 (87.50%), Postives = 90/96 (93.75%), Query Frame = 0 
Query:    3 GNRKVVRRLELEEKKGVLKWEVDALFGMKWERVKLSEARVVSNASLVKIGVVGKSDFFSFKACDDLEAGAVCKALVARANKHKVHGGDDVGASEAD 98
            GNR+VVRRLELEEKKGVLKWEVDALFGMKWE+VKL EARV+S+ +LVKIGVVGKSDFFSFKACDD+EAGAVCKALVARA KHKVHG D  GASEAD
Sbjct:  166 GNREVVRRLELEEKKGVLKWEVDALFGMKWEKVKLPEARVMSDGNLVKIGVVGKSDFFSFKACDDVEAGAVCKALVARAKKHKVHGSDYGGASEAD 261
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BLAST of mRNA_Ecto-sp13_S_contig16430.4638.1 vs. uniprot
Match: D8LJG1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJG1_ECTSI)

HSP 1 Score: 162 bits (409), Expect = 2.870e-47
Identity = 83/99 (83.84%), Postives = 88/99 (88.89%), Query Frame = 0 
Query:    1 MGGNRKVVRRLELEEKKGVLKWEVDALFGMKWERVKLSEARVVSNASLVKIGVVGKSDFFSFKACDDLEAGAVCKALVARANKHKVHGGDDVGASEADK 99
            M GNRKVVRRLELE+KKGVLKWEVDALFGMKWE+VKL EARV+S  SLVKIGVVGKS+FFSF+ACDDLEAGAVCK LVA A KHK  G DD GASEADK
Sbjct:  178 MRGNRKVVRRLELEKKKGVLKWEVDALFGMKWEKVKLPEARVMSTGSLVKIGVVGKSEFFSFEACDDLEAGAVCKTLVAHAMKHKEPGSDDGGASEADK 276
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16430.4638.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KED6_9PHAE8.690e-5087.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJG1_ECTSI2.870e-4783.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16430contigEcto-sp13_S_contig16430:93..1041 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16430.4638.1mRNA_Ecto-sp13_S_contig16430.4638.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16430 81..1140 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16430.4638.1 ID=prot_Ecto-sp13_S_contig16430.4638.1|Name=mRNA_Ecto-sp13_S_contig16430.4638.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=100bp
MGGNRKVVRRLELEEKKGVLKWEVDALFGMKWERVKLSEARVVSNASLVK
IGVVGKSDFFSFKACDDLEAGAVCKALVARANKHKVHGGDDVGASEADK*
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