prot_Ecto-sp13_S_contig16424.4634.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16424.4634.1
Unique Nameprot_Ecto-sp13_S_contig16424.4634.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length83
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16424.4634.1 vs. uniprot
Match: D7G5M9_ECTSI (STI1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5M9_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 8.630e-15
Identity = 57/72 (79.17%), Postives = 58/72 (80.56%), Query Frame = 0 
Query:    1 MGGAGGAVXXXXXXXXXXXXXXXMGDMIGKMMNNPKAMEAFQKAQSNPK--ASFFGVFQNGMSAMSKYPDDP 70
            MGG  GA XXXXXXXXXXXXXXX  DMIGKMMNNPKAMEAFQKAQSN    A+   V QNGMSAMSKY DDP
Sbjct:    1 MGGTSGAXXXXXXXXXXXXXXXXXXDMIGKMMNNPKAMEAFQKAQSNXXVMAAIQDVTQNGMSAMSKYQDDP 72
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BLAST of mRNA_Ecto-sp13_S_contig16424.4634.1 vs. uniprot
Match: D7G4D5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D5_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 2.590e-12
Identity = 37/47 (78.72%), Postives = 38/47 (80.85%), Query Frame = 0 
Query:   26 DMIGKMMNNPKAMEAFQKAQSNPK--ASFFGVFQNGMSAMSKYPDDP 70
            DMIGKMMNNPKAMEAFQKAQSN    A+   V QNGMSAMSKY DDP
Sbjct:  828 DMIGKMMNNPKAMEAFQKAQSNXXVMAAIQDVTQNGMSAMSKYQDDP 874
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16424.4634.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G5M9_ECTSI8.630e-1579.17STI1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G4D5_ECTSI2.590e-1278.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16424contigEcto-sp13_S_contig16424:3035..3655 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16424.4634.1mRNA_Ecto-sp13_S_contig16424.4634.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16424 3035..3655 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16424.4634.1 ID=prot_Ecto-sp13_S_contig16424.4634.1|Name=mRNA_Ecto-sp13_S_contig16424.4634.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=83bp
MGGAGGAVGGGAPGGGAGGGMGGMGDMIGKMMNNPKAMEAFQKAQSNPKA
SFFGVFQNGMSAMSKYPDDPRDPGDHRGAQGLV
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