prot_Ecto-sp13_S_contig16404.4623.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16404.4623.1
Unique Nameprot_Ecto-sp13_S_contig16404.4623.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length155
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16404.4623.1 vs. uniprot
Match: A0A6H5K792_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K792_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 3.120e-53
Identity = 133/156 (85.26%), Postives = 136/156 (87.18%), Query Frame = 0 
Query:    1 MRRREKLAESEGRSLPGQGKAARRKKGKGNKKTLAEIDGRQGGARKSGXXXXXXXXXXX-GSAFVSLSGESPSDDHDAGPSSTSRNYYNKDIANAHANPALVRRRPNWQPSSXXXXXXXXXXXXXXXXXXXXXXXXKARSSTEPGWAGADRAAGWG 155
            MRRREKLAESEGRSLPGQG+ A  K+GKGNKKT A+I  RQGGARKSG            GSAFVSLSGESPSDDHDAGPSSTSRNYYNKDIANAHANPALV RRPN QPSSXXXXXXXXXXXXXXXXXXXXXXXXKARSSTEPGWAGADRAAGWG
Sbjct:  206 MRRREKLAESEGRSLPGQGRGATGKQGKGNKKTPAKIHERQGGARKSGVARAAAAAATTAGSAFVSLSGESPSDDHDAGPSSTSRNYYNKDIANAHANPALVGRRPNGQPSSXXXXXXXXXXXXXXXXXXXXXXXXKARSSTEPGWAGADRAAGWG 361
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BLAST of mRNA_Ecto-sp13_S_contig16404.4623.1 vs. uniprot
Match: D8LIN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIN2_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 4.540e-21
Identity = 62/74 (83.78%), Postives = 65/74 (87.84%), Query Frame = 0 
Query:    1 MRRREKLAESEGRSLPGQGKAARRKKGKGNKKTLAEIDGRQGGARKSGXXXXXXXXXXXGSAFVSLSGESPSDD 74
            MRRREKLAESEGRSLPGQGKAARRK+GKGNKK  A+IDGRQGGARK+G    XXXXXXX   FVSLSGESPSDD
Sbjct:  103 MRRREKLAESEGRSLPGQGKAARRKEGKGNKKNPADIDGRQGGARKNGAARAXXXXXXXXXXFVSLSGESPSDD 176
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16404.4623.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K792_9PHAE3.120e-5385.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIN2_ECTSI4.540e-2183.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16404contigEcto-sp13_S_contig16404:2003..3717 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16404.4623.1mRNA_Ecto-sp13_S_contig16404.4623.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16404 2003..3732 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16404.4623.1 ID=prot_Ecto-sp13_S_contig16404.4623.1|Name=mRNA_Ecto-sp13_S_contig16404.4623.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=155bp
MRRREKLAESEGRSLPGQGKAARRKKGKGNKKTLAEIDGRQGGARKSGAA
RAAAAAATAGSAFVSLSGESPSDDHDAGPSSTSRNYYNKDIANAHANPAL
VRRRPNWQPSSSSAAAAAAANNTKTSEKGSGSGGGKARSSTEPGWAGADR
AAGWG
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