mRNA_Ecto-sp13_S_contig16398.4611.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16398.4611.1 vs. uniprot
Match: A0A6H5L1H4_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1H4_9PHAE) HSP 1 Score: 256 bits (655), Expect = 3.320e-84 Identity = 135/160 (84.38%), Postives = 137/160 (85.62%), Query Frame = 3
Query: 3 AKFEDAGRRLPPPCKRSSRLLPRSWCAVLLSLVLVLFLDTTGGSNVFAAXXXXXXXXXXXXXXXXGGGLGAPASDIITVTSENFKETIKEGTWFVKFYTDWCKHCQRLQPTWEELATELKGKVNVGQVNCDRDYSLCRRFHVAGYPTLVHVHNRRTRVYK 482
AKF DAGRRLP PCKRSSRLLPRSWCAVLLSLVLV FL+ GGS V AA XXXXXXX APASDIITVTSENFKETIKEGTWFVKFYTDWC HCQRLQPTWEELATELKGKVNVGQVNCDRDYSLCRRFHV GYPTLVHVHNRR+RVYK
Sbjct: 2 AKFADAGRRLPQPCKRSSRLLPRSWCAVLLSLVLVPFLEIRGGSIVVAAAVATAGVAGXXXXXXXXXXXXAPASDIITVTSENFKETIKEGTWFVKFYTDWCPHCQRLQPTWEELATELKGKVNVGQVNCDRDYSLCRRFHVTGYPTLVHVHNRRSRVYK 161
BLAST of mRNA_Ecto-sp13_S_contig16398.4611.1 vs. uniprot
Match: A0A1Y1WL38_9FUNG (Thioredoxin-domain-containing protein n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1WL38_9FUNG) HSP 1 Score: 102 bits (253), Expect = 3.700e-22 Identity = 44/89 (49.44%), Postives = 56/89 (62.92%), Query Frame = 3
Query: 216 PASDIITVTSENFKETIKEGTWFVKFYTDWCKHCQRLQPTWEELATELKGKVNVGQVNCDRDYSLCRRFHVAGYPTLVHVHNRRTRVYK 482
P + + +T ENF E G WF+KFY WC HCQ L P W EL +L+GK+NVG VNCD SLC +++V GYPTL + + T YK
Sbjct: 364 PDGEAVVLTKENFAERTASGPWFIKFYAPWCPHCQHLAPVWAELGGKLRGKMNVGSVNCDEASSLCSKYNVQGYPTLKLLWDGETADYK 452
BLAST of mRNA_Ecto-sp13_S_contig16398.4611.1 vs. uniprot
Match: A0A5J4XL76_9CHLO (Disulfide isomerase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XL76_9CHLO) HSP 1 Score: 94.4 bits (233), Expect = 1.920e-21 Identity = 39/87 (44.83%), Postives = 58/87 (66.67%), Query Frame = 3
Query: 219 ASDIITVTSENFKETIKEGTWFVKFYTDWCKHCQRLQPTWEELATELKGKVNVGQVNCDRDYSLCRRFHVAGYPTLVHVHNRRTRVY 479
+ ++ ++T NF ++ EG W ++F+ WC HC+ L+ TW+ LA ELKGKVNV +V+ + L RFHV G+PT+ HVH+ TR Y
Sbjct: 27 SQNVRSLTDANFDQSTAEGAWLIEFFAPWCSHCRDLEATWDALADELKGKVNVAKVDGTSERGLLGRFHVEGFPTIFHVHDTETRPY 113
BLAST of mRNA_Ecto-sp13_S_contig16398.4611.1 vs. uniprot
Match: A0A2G5B9K3_COERN (Thioredoxin-like protein (Fragment) n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5B9K3_COERN) HSP 1 Score: 98.6 bits (244), Expect = 4.350e-21 Identity = 39/76 (51.32%), Postives = 52/76 (68.42%), Query Frame = 3
Query: 219 ASDIITVTSENFKETIKEGTWFVKFYTDWCKHCQRLQPTWEELATELKGKVNVGQVNCDRDYSLCRRFHVAGYPTL 446
+ ++ +T ENF + EG WFVKFY WC HCQ L P WE+++ LKG+VNVG+VNCD + LC +V G+PTL
Sbjct: 131 SGQVVVLTKENFAKETAEGPWFVKFYAPWCPHCQTLAPVWEQVSERLKGRVNVGKVNCDENGKLCAEHNVQGFPTL 206
BLAST of mRNA_Ecto-sp13_S_contig16398.4611.1 vs. uniprot
Match: A0A7S2WDG4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDG4_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 4.570e-21 Identity = 42/85 (49.41%), Postives = 57/85 (67.06%), Query Frame = 3
Query: 213 APASDIITVTSENFKETIKEGT------WFVKFYTDWCKHCQRLQPTWEELATELKGKVNVGQVNCDRDYSLCRRFHVAGYPTLV 449
A SD++ +TS+NF+ + T WFVKFY WC HC++L P W+ELATELKG VNV +V+ + SL +RF + GYPTL+
Sbjct: 25 AEESDVVVLTSQNFEHDTQASTGATTGDWFVKFYAPWCGHCKKLAPVWDELATELKGVVNVAKVDAEAHSSLRKRFRIRGYPTLI 109
BLAST of mRNA_Ecto-sp13_S_contig16398.4611.1 vs. uniprot
Match: A0A0G2FWH2_9PEZI (Putative disulfide isomerase n=3 Tax=Botryosphaeriaceae TaxID=45131 RepID=A0A0G2FWH2_9PEZI) HSP 1 Score: 98.6 bits (244), Expect = 5.900e-21 Identity = 41/80 (51.25%), Postives = 56/80 (70.00%), Query Frame = 3
Query: 216 PASDIITVTSENFKE--TIKEGTWFVKFYTDWCKHCQRLQPTWEELATELKGKVNVGQVNCDRDYSLCRRFHVAGYPTLV 449
P I +T+E+F++ T+ E WFVKFY WC HCQ +QP W +A E+KGK+NVG+VNCD + LC+ HV GYPT++
Sbjct: 245 PQGTSIPLTAESFQKLVTMTEDPWFVKFYAPWCHHCQAMQPNWASMAREMKGKLNVGEVNCDAEKRLCKDAHVKGYPTIM 324
BLAST of mRNA_Ecto-sp13_S_contig16398.4611.1 vs. uniprot
Match: R1E6W0_BOTPV (Putative disulfide isomerase protein n=3 Tax=Botryosphaeriaceae TaxID=45131 RepID=R1E6W0_BOTPV) HSP 1 Score: 97.8 bits (242), Expect = 1.100e-20 Identity = 41/80 (51.25%), Postives = 56/80 (70.00%), Query Frame = 3
Query: 216 PASDIITVTSENFKE--TIKEGTWFVKFYTDWCKHCQRLQPTWEELATELKGKVNVGQVNCDRDYSLCRRFHVAGYPTLV 449
P I +T+E+F++ T+ E WFVKFY WC HCQ +QP W +A E+KGK+NVG+VNCD + LC+ HV GYPT++
Sbjct: 244 PQGTSIPLTAESFQKLVTMTEDPWFVKFYAPWCHHCQAMQPNWASMAREMKGKLNVGEVNCDVEKRLCKDAHVKGYPTIL 323
BLAST of mRNA_Ecto-sp13_S_contig16398.4611.1 vs. uniprot
Match: A0A178DWG9_9PLEO (Thioredoxin-domain-containing protein n=1 Tax=Pyrenochaeta sp. DS3sAY3a TaxID=765867 RepID=A0A178DWG9_9PLEO) HSP 1 Score: 95.1 bits (235), Expect = 9.540e-20 Identity = 37/80 (46.25%), Postives = 54/80 (67.50%), Query Frame = 3
Query: 216 PASDIITVTSENFKETIKEGT--WFVKFYTDWCKHCQRLQPTWEELATELKGKVNVGQVNCDRDYSLCRRFHVAGYPTLV 449
P+ + +T + F + + WF+KFY WC HCQ L PTWE LA +++GK+N+GQVNCD + +LC+ HV GYPT++
Sbjct: 241 PSGLVEILTGDTFPQLVTNSLDPWFIKFYAPWCHHCQALAPTWENLARQMRGKLNIGQVNCDAEKALCKEAHVRGYPTML 320
BLAST of mRNA_Ecto-sp13_S_contig16398.4611.1 vs. uniprot
Match: A0A2S7QXD1_9HELO (Disulfide isomerase protein n=3 Tax=unclassified Rutstroemia TaxID=2684950 RepID=A0A2S7QXD1_9HELO) HSP 1 Score: 95.1 bits (235), Expect = 9.680e-20 Identity = 36/80 (45.00%), Postives = 56/80 (70.00%), Query Frame = 3
Query: 216 PASDIITVTSENFKE--TIKEGTWFVKFYTDWCKHCQRLQPTWEELATELKGKVNVGQVNCDRDYSLCRRFHVAGYPTLV 449
PA + +T+E+F+ T+ + WF+KFY WC HCQ + P W +LA E+KGK+N+G+VNC+ + LC+ H+ GYPT++
Sbjct: 313 PAGTSVPLTAESFQNLVTMSQDPWFIKFYAPWCHHCQAMAPNWAQLAKEMKGKLNIGEVNCEAESRLCKDVHLRGYPTIL 392
BLAST of mRNA_Ecto-sp13_S_contig16398.4611.1 vs. uniprot
Match: G3JEC6_CORMM (Disulfide isomerase, putative n=9 Tax=Cordycipitaceae TaxID=474943 RepID=G3JEC6_CORMM) HSP 1 Score: 94.7 bits (234), Expect = 1.290e-19 Identity = 35/75 (46.67%), Postives = 56/75 (74.67%), Query Frame = 3
Query: 231 ITVTSENFKE--TIKEGTWFVKFYTDWCKHCQRLQPTWEELATELKGKVNVGQVNCDRDYSLCRRFHVAGYPTLV 449
+++T+E+F++ T+ WF+KFY WC HCQ L+PTWE+LA ++GK+N+G+VNCD++ LC+ H +PTL+
Sbjct: 207 VSLTAESFQKHVTLSHDPWFIKFYAPWCSHCQALKPTWEQLAKSMRGKLNIGEVNCDQEKRLCKDVHAKAFPTLL 281 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16398.4611.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16398.4611.1 >prot_Ecto-sp13_S_contig16398.4611.1 ID=prot_Ecto-sp13_S_contig16398.4611.1|Name=mRNA_Ecto-sp13_S_contig16398.4611.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=89bp WRSLRTPGADCHPPARDRPDYYHARGVPCCCHSFSFSSWTQRAALTSLPLback to top mRNA from alignment at Ecto-sp13_S_contig16398:226..3688+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16398.4611.1 ID=mRNA_Ecto-sp13_S_contig16398.4611.1|Name=mRNA_Ecto-sp13_S_contig16398.4611.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3463bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16398:226..3688+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16398:226..3688+ >mRNA_Ecto-sp13_S_contig16398.4611.1 ID=mRNA_Ecto-sp13_S_contig16398.4611.1|Name=mRNA_Ecto-sp13_S_contig16398.4611.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=267bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16398:226..3688+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |