mRNA_Ecto-sp13_S_contig1634.4592.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1634.4592.1
Unique NamemRNA_Ecto-sp13_S_contig1634.4592.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1634.4592.1 vs. uniprot
Match: A0A6H5JNN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNN8_9PHAE)

HSP 1 Score: 423 bits (1087), Expect = 9.890e-142
Identity = 318/360 (88.33%), Postives = 321/360 (89.17%), Query Frame = 2 
Query:  407 MSLPRPGGRSQGGETKSGGXXXXXXXXXXXXXXXXXXXXX--PSAFAGYTPPSANPPNPYTSGTGANSAXXXXXXXXXXXXXXXXXXXXXXXXAFGGAGAPQGXXXXXXXXXXXXXXXXVDGRNQYGFSNSGGGGGLDTLGASMGAVAGAAMGMAAGGAQXXXXXXXXXXXXXXXXXXXXQPLDWHQWTPDGMNAQMLNVGGNVASNFLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWFRLPSEDEVKDDGRPKFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLVAYTGYK 1480
            MSLPRPGGR QGGE KSG XXXXXXXXXXXXXXXXXXXXX  PSAFAGYTPPSANPPNPYTS TGA+  XXXXXXXXXXXXXX XXXXXXX XAF     PQ XXXXXXXXXXXXXXXX                  DTLGASMGAVAGAAMGMAAGGAQ   XXXXXXXXXXXXXXX  QPLDWHQWTPDGMNAQMLNVGGNVASNFLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVL+KDWFRLPSEDEVKDDGRPKFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDL+AYTGYK
Sbjct:    1 MSLPRPGGRPQGGEIKSGXXXXXXXXXXXXXXXXXXXXXXXXPSAFAGYTPPSANPPNPYTSATGASXXXXXXXXXXXXXXXXYXXXXXXXGXAFXXXXXPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTLGASMGAVAGAAMGMAAGGAQRKAXXXXXXXXXXXXXXX--QPLDWHQWTPDGMNAQMLNVGGNVASNFLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLRKDWFRLPSEDEVKDDGRPKFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLIAYTGYK 358
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BLAST of mRNA_Ecto-sp13_S_contig1634.4592.1 vs. uniprot
Match: D7FLH1_ECTSI (Protein YIF1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLH1_ECTSI)

HSP 1 Score: 355 bits (910), Expect = 7.530e-117
Identity = 180/181 (99.45%), Postives = 180/181 (99.45%), Query Frame = 2 
Query:  941 QPLDWHQWTPDGMNAQMLNVGGNVASNFLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWFRLPSEDEVKDD-GRPKFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLVAYTGYK 1480
            QPLDWHQWTPDGMNAQMLNVGGNVASNFLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWFRLPSEDEVKDD GRPKFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLVAYTGYK
Sbjct:   52 QPLDWHQWTPDGMNAQMLNVGGNVASNFLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWFRLPSEDEVKDDQGRPKFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLVAYTGYK 232
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BLAST of mRNA_Ecto-sp13_S_contig1634.4592.1 vs. uniprot
Match: A0A835YSN9_9STRA (Protein YIF1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSN9_9STRA)

HSP 1 Score: 191 bits (486), Expect = 2.280e-54
Identity = 101/167 (60.48%), Postives = 124/167 (74.25%), Query Frame = 2 
Query:  989 MLNVGGNVASNFLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWFRLPSEDE-VKDDGRP--KFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLVAYTGYK 1480
            MLN+GG +A +F+ SN+A+YQP VSG+W  LK YF VDN YVL+K KVLLL VLKK W R+P+E+     DG    KF RP  D NAPDLY+PLM+FIT  L++G+ KG A+        F+PEVL EVTSS +V QLLEVLL+RLGLYLL +PA +LDLVA+TGYK
Sbjct:    1 MLNMGGTMAKSFISSNMARYQPGVSGFWALLKHYFAVDNAYVLRKFKVLLLPVLKKSWHRVPAEEAGAAQDGSAQFKFARPCVDENAPDLYLPLMAFITHALISGFVKGRAS-------NFTPEVLVEVTSSAMVVQLLEVLLVRLGLYLLGAPAAMLDLVAFTGYK 160
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BLAST of mRNA_Ecto-sp13_S_contig1634.4592.1 vs. uniprot
Match: W7TGL4_9STRA (Protein YIF1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TGL4_9STRA)

HSP 1 Score: 151 bits (382), Expect = 1.420e-37
Identity = 82/189 (43.39%), Postives = 118/189 (62.43%), Query Frame = 2 
Query:  980 NAQMLNVGGNVASNFLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWFRLPSEDEVKDDG----------------------RPKFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLVAYTGYK 1480
            N+Q  ++G  +   +L ++V++Y P V+  W+ LK YF V++ YV +KL  L+    K+ W R     ++KD G                      RP+++ P+ D NAPDLY+PLM+F+T+VL+TGYAKG+         +F+PEVL EVTSSC+V QLLE+ +IRLGLYLL +PA +LDL+A TGYK
Sbjct:  106 NSQAFSMGVGMGQEYLNASVSRYTPWVTSVWHGLKYYFAVNHHYVKRKLFTLVFPYRKRHWRR-----QMKDSGAAGSSGAYGQQGGNADSASAMYRPQYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTK-------NSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPATLLDLLAVTGYK 282
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BLAST of mRNA_Ecto-sp13_S_contig1634.4592.1 vs. uniprot
Match: A0A7S1TS60_9STRA (Protein YIF1 n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TS60_9STRA)

HSP 1 Score: 136 bits (343), Expect = 3.690e-33
Identity = 73/169 (43.20%), Postives = 102/169 (60.36%), Query Frame = 2 
Query:  974 GMNAQMLNVGGNVASNFLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWFRLPSEDEVKDDGRPKFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLVAYTGYK 1480
            G +  M+N+G N A  F    +    P  + ++ +LK YF+V+N YVL+KL +L++   KK W R  S+D    D   KF RP+ D NAPDLY+PLM+ +TFVL+TG+ KG+        G FSP+VL  V +SC VT +L +L++  GL+        LDL AYTGYK
Sbjct:   42 GFDPGMVNMGANAAGQFFNGQMQNVSPAAATFYRSLKYYFSVNNSYVLRKLGILIMPWNKKRWARETSDD---GDVNKKFARPLHDENAPDLYIPLMALVTFVLVTGFVKGTG-------GEFSPDVLQNVLTSCAVTDVLLMLIMYGGLFFTQLSVPTLDLYAYTGYK 200
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BLAST of mRNA_Ecto-sp13_S_contig1634.4592.1 vs. uniprot
Match: A0A024GGU5_9STRA (Protein YIF1 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GGU5_9STRA)

HSP 1 Score: 135 bits (341), Expect = 1.730e-32
Identity = 71/164 (43.29%), Postives = 99/164 (60.37%), Query Frame = 2 
Query:  989 MLNVGGNVASNFLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWFRLPSEDEVKDDGRPKFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLVAYTGYK 1480
            M  V  + AS+FL+     Y P   G W  LK YFTVDN YV  +LK+LL     K+W R+    +  D  + K+  P+ D+NAPDLY+PLM F+T++L+ GY KG++         FSP+V+    S C+V QL+EV ++   LYLLNS    LDL+A++GYK
Sbjct:   80 MAGVAMSTASDFLQKQSQAYIPGAYGVWGRLKHYFTVDNNYVKNRLKILLFPFWHKNWRRI---GDTTDPNQNKYAPPINDINAPDLYIPLMGFLTYILIVGYTKGAS-------NQFSPDVIGADASYCLVMQLIEVAILASFLYLLNSSVSFLDLIAFSGYK 233
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BLAST of mRNA_Ecto-sp13_S_contig1634.4592.1 vs. uniprot
Match: A0A2P4YJM1_9STRA (Protein YIF1 n=4 Tax=Phytophthora TaxID=4783 RepID=A0A2P4YJM1_9STRA)

HSP 1 Score: 134 bits (337), Expect = 1.860e-31
Identity = 73/176 (41.48%), Postives = 109/176 (61.93%), Query Frame = 2 
Query:  968 PDGMNA----QMLNVGGNVASNFLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWFRLPSEDEVKDDGRP-KFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLVAYTGYK 1480
            PD MN      M  +  N A +FL+     Y P   G W +LK YFTV+N YV  +LK+LLL    K+W R+ + ++  D+ +P ++  P  D NAPDLY+PLM F+T++L+ GY+KG++         FSP+V+T+  S C+V QL+E+ ++   LY+LNS    LDLV+++GYK
Sbjct:  110 PDFMNQFSSNPMAGLAMNSAQDFLQKQSEMYLPGAYGVWGSLKYYFTVNNSYVKSRLKILLLPFRHKNWRRMGNGEQ--DESKPMQYAPPTRDSNAPDLYIPLMGFLTYILIVGYSKGTS-------NQFSPDVITKDASYCLVMQLIEIGVLAACLYVLNSSISFLDLVSFSGYK 276
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BLAST of mRNA_Ecto-sp13_S_contig1634.4592.1 vs. uniprot
Match: F0WGG6_9STRA (Protein YIF1 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WGG6_9STRA)

HSP 1 Score: 134 bits (337), Expect = 3.120e-31
Identity = 71/164 (43.29%), Postives = 98/164 (59.76%), Query Frame = 2 
Query:  989 MLNVGGNVASNFLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWFRLPSEDEVKDDGRPKFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLVAYTGYK 1480
            +  V  + AS+F++     Y P   G W  LK YFTVDN YV  +LK+LL     K+W RL    +  D    K+  P+ D+NAPDLY+PLM F+T++L+ GY KG++         FSP+V+    S C+V QLLEV ++   LYLLNS    LDL+A++GYK
Sbjct:  160 VAGVAMSTASDFIQKQSQAYIPGAYGVWERLKHYFTVDNNYVKNRLKILLFPFWHKNWRRL---GDTTDPNYNKYAAPINDINAPDLYIPLMGFLTYILIVGYTKGAS-------NQFSPDVIGADASYCLVMQLLEVAILASFLYLLNSSVSFLDLIAFSGYK 313
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BLAST of mRNA_Ecto-sp13_S_contig1634.4592.1 vs. uniprot
Match: A0A421H1I6_9STRA (Protein YIF1 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421H1I6_9STRA)

HSP 1 Score: 133 bits (335), Expect = 4.770e-31
Identity = 73/176 (41.48%), Postives = 108/176 (61.36%), Query Frame = 2 
Query:  968 PDGMNA----QMLNVGGNVASNFLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWFRLPSEDEVKDDGRP-KFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLVAYTGYK 1480
            PD MN      M  +  N A +FL      Y P   G W ++K YFTV+N YV  +LK+LLL    K+W R+ + D+  D+ +P ++  P  D NAPDLY+PLM F+T++L+ GY+KG++         FSP+V+T+  S C+V QL+E+ ++   LY+LNS    LDLV+++GYK
Sbjct:  154 PDFMNQFSSNPMAGLAMNSAQDFLHKQSELYLPGAYGIWGSIKYYFTVNNSYVKSRLKILLLPFRHKNWRRMGNGDQ--DESKPMQYAPPTRDSNAPDLYIPLMGFLTYILIVGYSKGTS-------NQFSPDVITKDASYCLVMQLIEIGVLAACLYVLNSSISFLDLVSFSGYK 320
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1634.4592.1 vs. uniprot
Match: G4YM91_PHYSP (Protein YIF1 n=2 Tax=Phytophthora TaxID=4783 RepID=G4YM91_PHYSP)

HSP 1 Score: 133 bits (334), Expect = 7.710e-31
Identity = 69/165 (41.82%), Postives = 105/165 (63.64%), Query Frame = 2 
Query:  989 MLNVGGNVASNFLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWFRLPSEDEVKDDGRP-KFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLVAYTGYK 1480
            M  +  N A +FL+     Y P   G W +LK YFTV+N YV  +LK+LLL    K+W R+ + ++  D+ +P ++  P  D NAPDLY+PLM F+T++L+ GY+KG++         FSP+V+T+  S C+V QL+E+ ++   LY+LNS    LDLV+++GYK
Sbjct:  155 MAGLAMNSAQDFLQKQSEMYLPGAYGVWGSLKYYFTVNNSYVKSRLKILLLPFRHKNWRRMGNGEQ--DESKPMQYAPPTRDCNAPDLYIPLMGFLTYILIVGYSKGTS-------NQFSPDVITKDASYCLVMQLIEIGVLAACLYVLNSSISFLDLVSFSGYK 310
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1634.4592.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JNN8_9PHAE9.890e-14288.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLH1_ECTSI7.530e-11799.45Protein YIF1 n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A835YSN9_9STRA2.280e-5460.48Protein YIF1 n=1 Tax=Tribonema minus TaxID=303371 ... [more]
W7TGL4_9STRA1.420e-3743.39Protein YIF1 n=2 Tax=Monodopsidaceae TaxID=425072 ... [more]
A0A7S1TS60_9STRA3.690e-3343.20Protein YIF1 n=2 Tax=Phaeomonas parva TaxID=124430... [more]
A0A024GGU5_9STRA1.730e-3243.29Protein YIF1 n=1 Tax=Albugo candida TaxID=65357 Re... [more]
A0A2P4YJM1_9STRA1.860e-3141.48Protein YIF1 n=4 Tax=Phytophthora TaxID=4783 RepID... [more]
F0WGG6_9STRA3.120e-3143.29Protein YIF1 n=1 Tax=Albugo laibachii Nc14 TaxID=8... [more]
A0A421H1I6_9STRA4.770e-3141.48Protein YIF1 n=3 Tax=Phytophthora kernoviae TaxID=... [more]
G4YM91_PHYSP7.710e-3141.82Protein YIF1 n=2 Tax=Phytophthora TaxID=4783 RepID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1634contigEcto-sp13_S_contig1634:10857..15421 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score357.1
Seed ortholog evalue1.1e-95
Seed eggNOG ortholog2880.D7FLH1
Preferred nameYIF1B
Model size1483
KEGG koko:K08023,ko:K20362
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0000902,GO:0002790,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005793,GO:0005794,GO:0005798,GO:0006810,GO:0006886,GO:0006888,GO:0006950,GO:0006986,GO:0007154,GO:0007165,GO:0008104,GO:0008150,GO:0009306,GO:0009653,GO:0009987,GO:0010033,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016192,GO:0023052,GO:0030134,GO:0030135,GO:0030173,GO:0030968,GO:0031090,GO:0031224,GO:0031228,GO:0031300,GO:0031301,GO:0031410,GO:0031982,GO:0031984,GO:0032502,GO:0032940,GO:0032989,GO:0033036,GO:0033554,GO:0034613,GO:0034620,GO:0034976,GO:0035966,GO:0035967,GO:0036498,GO:0042175,GO:0042221,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046903,GO:0046907,GO:0048193,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051716,GO:0065007,GO:0070727,GO:0070887,GO:0071310,GO:0071702,GO:0071705,GO:0071840,GO:0097708,GO:0098588,GO:0098791,GO:0098827
Exons6
EggNOG free text desc.ER to Golgi vesicle-mediated transport
EggNOG OGsCOG5197@1,KOG3094@2759
Cds size1212
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1634.4592.1prot_Ecto-sp13_S_contig1634.4592.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1634 11811..15421 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462860.5508227-UTR-Ecto-sp13_S_contig1634:10856..109361681462860.5508227-UTR-Ecto-sp13_S_contig1634:10856..10936Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1634 10857..10936 +
1681462860.5637403-UTR-Ecto-sp13_S_contig1634:11619..118101681462860.5637403-UTR-Ecto-sp13_S_contig1634:11619..11810Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1634 11620..11810 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462860.574031-CDS-Ecto-sp13_S_contig1634:11810..125271681462860.574031-CDS-Ecto-sp13_S_contig1634:11810..12527Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1634 11811..12527 +
1681462860.58208-CDS-Ecto-sp13_S_contig1634:13206..133141681462860.58208-CDS-Ecto-sp13_S_contig1634:13206..13314Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1634 13207..13314 +
1681462860.5905764-CDS-Ecto-sp13_S_contig1634:13765..138671681462860.5905764-CDS-Ecto-sp13_S_contig1634:13765..13867Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1634 13766..13867 +
1681462860.6019077-CDS-Ecto-sp13_S_contig1634:14784..149371681462860.6019077-CDS-Ecto-sp13_S_contig1634:14784..14937Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1634 14785..14937 +
1681462860.6140854-CDS-Ecto-sp13_S_contig1634:15289..154211681462860.6140854-CDS-Ecto-sp13_S_contig1634:15289..15421Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1634 15290..15421 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1634.4592.1

>prot_Ecto-sp13_S_contig1634.4592.1 ID=prot_Ecto-sp13_S_contig1634.4592.1|Name=mRNA_Ecto-sp13_S_contig1634.4592.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=404bp
MRKQSRQVVLSPYPIPTSPITCLIPHVYVHIPKEENPAKAYYYGAMSLPR
PGGRSQGGETKSGGGGSGTGYGGGAKTTAAAAAAAPSAFAGYTPPSANPP
NPYTSGTGANSAAGAGSGLSFGGGGGYGGGGGFGGGAFGGAGAPQGFGGG
GATAGGALGGGGVDGRNQYGFSNSGGGGGLDTLGASMGAVAGAAMGMAAG
GAQQKAGGGGGGGQQQQQQQQQQQPLDWHQWTPDGMNAQMLNVGGNVASN
FLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWFRL
PSEDEVKDDGRPKFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAAL
SDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLVAYT
GYK*
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mRNA from alignment at Ecto-sp13_S_contig1634:10857..15421+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1634.4592.1 ID=mRNA_Ecto-sp13_S_contig1634.4592.1|Name=mRNA_Ecto-sp13_S_contig1634.4592.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4565bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1634:10857..15421+ (Ectocarpus species13 EcNAP12_S_4_19m)
CGACAAGAGGCAAAAGCGACGAGGAGGGAGAGCTCCCTTGCTCTGGAAGG
TTGTTGGTTCTGGGCACACACTCTGTACAGGTGAGAGGCTGACACAGAGT
CATGTTCCTTTAGTTTTGTCCACCTCATCTTTTTCGGAGATAACGTCTTT
CGCCACTTCTCAAAACCTGTGTACACAGCGGAGCTGTCCACACAACACCC
TAAACAGCCAACACCAGGGCTGACGGCTACTAGTTTTTCCTGTCTCGTCA
CACGTCACGCCTTAGCGCTGAGAAGTTGGCGTGCTAGCGTGCCCTTGGAG
AGACACGAGGGTCACGGGATACGAACCTGTGGCTTTCCTTGACAGCAAAC
ACTCCGCACCTGCCGACTAATGATCGATCCTTCCGCTCGTTCGCGACGTC
AGCCTAATACAACACAGCAGTAGCTCACACCTGCACCACACCGAGAGACC
AGAATCAAGGCACGGCTGTTTGTGTACAGCTCTGGCTGGTTCGCGGTTAA
TGTGCCATCCGCTTTGTAGTATATAATTGTCCAGCAGGACTGCTGCTCCC
GACATATGCATAGAACGGCGGTCTGATGCACGCCCGGAATATTTGTTCCA
AATTCTGGCCGTTCCATCTCTGCACGACCGCAAACAGCCGTGTTTCCCGT
AAGGTTTTCTACTGCCGTGCTGTTGATGATGTCGCCCCGCAACAGCGTGA
GCGCACCCCATCCCCTCTTTCACCTAAAAATTTTCGGCCGCCGTCCCGCC
CCAATCGCGCCAGTAAGGAACGCACACCGCTGAAAAGCAGAACCAGGACT
ACAGCTGTCCCCTAGCTAATGTCTCCGAGGCACTGTCCTCGATCCCTTCG
TATCTCAACCCTGGACAAGAGGCAGCAGCTCGCCGGCAGACCTGAATACA
CCCTCCCGCAACCGCCGAGCGATGAAGACCTTCGCCAGAAATTAAGTTTA
CAGTATGAGGAAACAGAGCAGACAGGTTGTACTCAGCCCGTACCCTATTC
CAACTTCCCCAATTACATGCCTTATCCCACATGTGTATGTACATATACCT
AAAGAGGAGAACCCTGCAAAGGCCTACTACTACGGAGCGATGAGCCTTCC
ACGACCTGGCGGGCGCTCGCAAGGCGGAGAAACAAAGTCTGGCGGTGGCG
GCAGCGGGACCGGTTACGGCGGTGGCGCTAAGACAACGGCAGCAGCAGCA
GCCGCAGCCCCGAGCGCTTTCGCCGGGTACACGCCTCCGTCCGCCAATCC
CCCGAACCCGTACACCTCGGGAACGGGTGCCAACAGCGCCGCGGGCGCGG
GCAGCGGGCTTTCCTTTGGCGGAGGGGGTGGGTATGGCGGGGGAGGGGGG
TTCGGGGGTGGTGCATTTGGGGGCGCGGGGGCACCGCAAGGGTTTGGAGG
AGGAGGGGCGACGGCGGGTGGAGCTCTGGGGGGAGGAGGGGTCGATGGGA
GGAATCAATACGGGTTTTCGAACAGTGGAGGCGGAGGTGGGTTGGATACC
CTGGGCGCTAGCATGGGAGCGGTAGCAGGGGCTGCGATGGGCATGGCGGC
GGGAGGGGCTCAGCAGAAAGCGGGGGGGGGGGGGGGGGGGGGTCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCCTTTGGACTGGCACCAATGGACT
CCGGATGGAATGAATGCACAGGTTCGTTGAAGGGCTACAGCAGTGAGGAT
GGTCGTTCGGTCCCGCTTTGTGTTCCTTGAGTTGTCGTAGTGTGATATTT
TCGTGGCAGCCGGAGAGATTTGCTTCGTCCACGCGTGGCATCGAATGCAG
AGGAGGGCCGGGAGCACTTGAGATCGATTGGCTGCAGGAGGAGTTCCGGG
CTCTGTGTTGCCACCGTCACATAGGTCCCAAGGCCCCAAGCGGGGATTCG
GGAAGTCGCCGATAGGTCCTGGATATCGTCCACTGTTTGGTCGAGCCAAC
GTCAGCCTGACCCGTCGCCCGCCAATCAGAGTCATTCAAACAGGCAGCGT
TGGATCTGAGAAGCAATTCCATTGTAAGCAAGGAAAGCGATTCTGACCAG
GAGCCTGAAAAGGGCAGGACGTCTCTTTCGGCCGTGTAAGATAGTAAGAC
GGCAGTTCTGGCGACAGGCGGATAGATAGACAAGACACAAGAGGAGGCAG
ACAGCGAGAGCGAGACAGAGAGAAAAAGAGAGAAAGGAGCCTACAATACT
GGTCGTTGCCCCCAGGTCGTTGGTAAACTCCCCCGGGGCGATAACCATTT
CATTTCCCCTGACTAGCGACTAAATGGTAGATTTTGACTACGGCAGCAGC
AAACTTTAGTAACTCTTCGGCAAAACCCCCGCGTTACACGTCGCGTGCAG
ATGCTGAACGTCGGCGGGAACGTGGCCTCCAACTTCCTTAAAAGCAACGT
CGCGCAGTACCAGCCTCGGGTGTCTGGCTACTGGAACACGCTCAAGGTCT
ACTTCACGGTGAGGGGGAGAGGCTCCATGTAGTGGCAGCACGCGATTTGA
GGTAAATAGGAGAGAAGGTGGATGAAACCGGGGCTGGGCATCATCAGTCG
TGCACACGAGCGATCAATTTACGATAGATCAGGAGCGGTGTGTTTGGGGT
GGTCGTGTTTTATTTATTGTCGGCAAGGGCCAAGGTTGGGGCGAGCGTTC
TGCCCACGGCTACCTTTTTTCCAGCTGTAGCTCTTTTCCGTGTGCACAAG
AGTGCTGCCTGTCCATTTGCACCCGTGATTCCGTCGGCACTGACGGTGCG
TTGTTGTTGCAAGGGTTGTGGTGAGCGTTTCGTGATGTGGCGATAGGGTT
TTGGCGAATACCCCGCCTCTCGTGTCCACCATTGTGCCGCACACTTGGTG
CTGCTCCTTCGTTTACATATGATTCCCGCTGTTGTGCTGTGCTGCTCTGA
ATGAGGCAGGTGGACAACCGATACGTGCTGAAGAAGTTGAAGGTGCTGCT
GCTTTCGGTGTTGAAGAAGGACTGGTTCCGGCTACCGTCGGAGGACGAGG
TTAAGGATGACGTGAGTGGCCAGGATAACCAAGAGAAGGAGGACGTGCAG
ACAGACGGAAAGCGTTTAGACTCGGCAACACAACCCAGCCCATTTTGGTG
GATTCAACGAGATTCGCCGGGCGGAGGAATTGAAGTGTCAATACGGTGGA
GGGCCCGGTTCAGCGACCCCTTGTGTCACGACGAAATGTGGCCGCTAGTC
AGGGCAGGTCGCTAAACCGAACGACCATGTGCACAGCAGCTATGCTACCG
GGGTGCGGCGGTGCGACGTGATTTTGTGGTCGCTTACCAACACGGTATGT
CGCTGAACAGGGGGTCGCTAAACCGGGCCCCCTACTGTACGAAGTATTTA
GGAACGATAACACTAGCAGACTTCACGGTTACGCACATGCCTATGGCATA
AAACGATGCTTGCACGGGCGGCAACACACGTGTTTCCACGCATGATCGCT
CTGCCGTTGTAATTGCCCATCTACCTACCCTTGAACACACTTGGCGAGGC
GGGCGCCAATCTCAGCCGCGCGCAGTACCAACACCTTCGCAGCGACGCTC
TTGCATCGACAACGACACCCGCAAAAGCAGCGACCGACTACCTTTTTTTT
TTGTGTGTATTTTCCCTGTTCCTACACATGCACATGCCGAGAGAGAGTTT
CGTTGCCGTGCCAAACCCGCCGCCGCAGCAGCAGCAGCTGCTGCAGCCGA
AGCTGTAGAGTCTGCTTGCTTTCCACTACCACCACGACCGGCCACCGCAG
CAGCATAACACCCGCATGTCCCGGTTGCTCCCGTCGCCCACAGTTTTTAG
ATATCTGTTGCTGTTGTTGCCTTTACGTAAAAAAACGTTCCGATCTCCCT
ATCTAGTGCTGTACGTCCATCTGTCCGACTATATGTATCATAATTTTCTT
CTTCTTTTTTTCCTGTTTTGCGCAGCAGGGGAGACCAAAGTTCGAACGGC
CCGTGGCGGACGTGAACGCCCCCGACCTGTACGTTCCGTTAATGTCGTTC
ATCACCTTCGTGCTCTTGACCGGATACGCGAAGGGTTCAGCGGCGGCGCT
GTCTGACGGTGCCGGGACGTTCTCGCCAGAGGTGAGAAAGACGAGACGAT
GATGATGCATTAGGGTATGCATAGGTGGGTGCATCATGTGGCAACTGGCG
GCGGAAGAGGGTGGGGGGGGGGAGCTACGCAAGAGAGAGAGGGAGGGAGG
GAGGGAGGGAGGGGGGGGGGGAGGGAGACAAAGAGAGACAGACGGGGAGA
CAAAGAGAGGCAGGCGCGACTGCATGCGCCCAGAAGTGAATGCGACTTGT
TGTTTCTTTTGCTTGTGTGCACAGGTGTTTCTTCGAGGTGACATTTTGAT
CAGTTCCACCCCGCCTACGCCCACCCGTGCCTTCTCTCCCTGTGTTTGTT
TGTGTGTATGTCGTGGTTGACGTTGGTCTTCAGGTGTTGACCGAGGTGAC
GAGCTCTTGCATAGTGACGCAGCTGTTGGAGGTGCTCCTTATCCGGCTGG
GGCTGTATCTTCTCAACAGCCCGGCCGTCGTGCTGGACCTCGTCGCGTAC
ACTGGCTACAAGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1634:10857..15421+

>mRNA_Ecto-sp13_S_contig1634.4592.1 ID=mRNA_Ecto-sp13_S_contig1634.4592.1|Name=mRNA_Ecto-sp13_S_contig1634.4592.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1212bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1634:10857..15421+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGGAAACAGAGCAGACAGGTTGTACTCAGCCCGTACCCTATTCCAAC
TTCCCCAATTACATGCCTTATCCCACATGTGTATGTACATATACCTAAAG
AGGAGAACCCTGCAAAGGCCTACTACTACGGAGCGATGAGCCTTCCACGA
CCTGGCGGGCGCTCGCAAGGCGGAGAAACAAAGTCTGGCGGTGGCGGCAG
CGGGACCGGTTACGGCGGTGGCGCTAAGACAACGGCAGCAGCAGCAGCCG
CAGCCCCGAGCGCTTTCGCCGGGTACACGCCTCCGTCCGCCAATCCCCCG
AACCCGTACACCTCGGGAACGGGTGCCAACAGCGCCGCGGGCGCGGGCAG
CGGGCTTTCCTTTGGCGGAGGGGGTGGGTATGGCGGGGGAGGGGGGTTCG
GGGGTGGTGCATTTGGGGGCGCGGGGGCACCGCAAGGGTTTGGAGGAGGA
GGGGCGACGGCGGGTGGAGCTCTGGGGGGAGGAGGGGTCGATGGGAGGAA
TCAATACGGGTTTTCGAACAGTGGAGGCGGAGGTGGGTTGGATACCCTGG
GCGCTAGCATGGGAGCGGTAGCAGGGGCTGCGATGGGCATGGCGGCGGGA
GGGGCTCAGCAGAAAGCGGGGGGGGGGGGGGGGGGGGGTCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCCTTTGGACTGGCACCAATGGACTCCGG
ATGGAATGAATGCACAGATGCTGAACGTCGGCGGGAACGTGGCCTCCAAC
TTCCTTAAAAGCAACGTCGCGCAGTACCAGCCTCGGGTGTCTGGCTACTG
GAACACGCTCAAGGTCTACTTCACGGTGGACAACCGATACGTGCTGAAGA
AGTTGAAGGTGCTGCTGCTTTCGGTGTTGAAGAAGGACTGGTTCCGGCTA
CCGTCGGAGGACGAGGTTAAGGATGACGGGAGACCAAAGTTCGAACGGCC
CGTGGCGGACGTGAACGCCCCCGACCTGTACGTTCCGTTAATGTCGTTCA
TCACCTTCGTGCTCTTGACCGGATACGCGAAGGGTTCAGCGGCGGCGCTG
TCTGACGGTGCCGGGACGTTCTCGCCAGAGGTGTTGACCGAGGTGACGAG
CTCTTGCATAGTGACGCAGCTGTTGGAGGTGCTCCTTATCCGGCTGGGGC
TGTATCTTCTCAACAGCCCGGCCGTCGTGCTGGACCTCGTCGCGTACACT
GGCTACAAGTGA
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