prot_Ecto-sp13_S_contig16335.4590.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16335.4590.1
Unique Nameprot_Ecto-sp13_S_contig16335.4590.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length201
Homology
BLAST of mRNA_Ecto-sp13_S_contig16335.4590.1 vs. uniprot
Match: D8LG65_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG65_ECTSI)

HSP 1 Score: 172 bits (435), Expect = 2.630e-48
Identity = 92/107 (85.98%), Postives = 95/107 (88.79%), Query Frame = 0
Query:    1 MCSLSFAKHHFLLSSSQVEGLPTLHVDKAHETGLPGVNTFGHNKRSITLTTCSAGKSSALARWGSEETFQAEMSARKVKAEAAHRARVAAYKAAQESMAGRTLPPPD 107
            MCSLSFAKHHFLLSSSQ   LPTLHVDKA+ETGLPGV  F HNKRSIT TTCSAGKSSALARWGSEE FQAEMSARK KAEAAHRARVAAY+AAQESMAGR  P P+
Sbjct:  109 MCSLSFAKHHFLLSSSQAARLPTLHVDKAYETGLPGVERFSHNKRSITRTTCSAGKSSALARWGSEEVFQAEMSARKGKAEAAHRARVAAYEAAQESMAGRAPPLPE 215          
BLAST of mRNA_Ecto-sp13_S_contig16335.4590.1 vs. uniprot
Match: D8LG64_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG64_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 7.240e-45
Identity = 88/132 (66.67%), Postives = 100/132 (75.76%), Query Frame = 0
Query:   62 RWGSEETFQAEMSARKVKAEAAHRARVAAYKAAQESMAGRTLP-PPDAAGEDDSTSTSPSAEPSLLEKPKPYPSAPRICGLGDETNFVGANQQEYHGVRGEKYGFYLIVNDAFFDAGPTLRGIISKPSRTGH 192
            RWGSEE FQAEM+ARKVKAEAAHRARVAAY+  Q+    ++     +  GE+DSTSTSP AEPS LEKPK YPS PRIC L  ETN+V +NQQE HGVRGEKYGFY IVNDAFFDAGPT+    +  S + H
Sbjct:  113 RWGSEEGFQAEMTARKVKAEAAHRARVAAYEITQQQSTAKSPSLSREGGGEEDSTSTSPPAEPSPLEKPKRYPSTPRICRLSRETNYVASNQQEGHGVRGEKYGFYRIVNDAFFDAGPTIAISCATSSPSPH 244          
BLAST of mRNA_Ecto-sp13_S_contig16335.4590.1 vs. uniprot
Match: A0A835ZL97_9STRA (Alpha-ketoglutarate-dependent dioxygenase FTO n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL97_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 3.500e-11
Identity = 68/198 (34.34%), Postives = 94/198 (47.47%), Query Frame = 0
Query:    1 MCSLSFA--------KHHFLLSSSQVEGLPTLHVDKAHETGLPGVNTFGHNKRSITLTTCSAGKSSALARWGSEE------------------TFQAEMSARKVKAEAAHRARVAAYKAAQESMAGRTLPPPDAAGEDDSTSTSPSAEPSLLEKPKPYPSAPRICGLGDETNFVGANQQEYHGVRGEKYGFYLIVNDA 172
            +CS+S+         K HFLLS+SQ   L TL V +A E+G        + K S+ +T     + SA+ R+GSEE                   F AEM+ R+ KA+  H AR   Y+AAQ +         +A    D+++   S            PS+PRI GL +ETN+VGANQ   H V G KYG   + +DA
Sbjct:  815 LCSVSYTXXXXXXXXKAHFLLSASQEAELVTLVVPEAAESGC-----VANRKASLPITHLGRARDSAIRRFGSEEGIMHLSRAXXXXXXXXXXAFDAEMTRRRSKAQDGHDAR---YRAAQVATT-------EARARGDASAVIKS------------PSSPRILGLANETNYVGANQASGH-VYGAKYGHVFVSDDA 984          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16335.4590.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LG65_ECTSI2.630e-4885.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LG64_ECTSI7.240e-4566.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZL97_9STRA3.500e-1134.34Alpha-ketoglutarate-dependent dioxygenase FTO n=1 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16335contigEcto-sp13_S_contig16335:71..3006 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16335.4590.1mRNA_Ecto-sp13_S_contig16335.4590.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16335 1..3630 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16335.4590.1 ID=prot_Ecto-sp13_S_contig16335.4590.1|Name=mRNA_Ecto-sp13_S_contig16335.4590.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=201bp
MCSLSFAKHHFLLSSSQVEGLPTLHVDKAHETGLPGVNTFGHNKRSITLT
TCSAGKSSALARWGSEETFQAEMSARKVKAEAAHRARVAAYKAAQESMAG
RTLPPPDAAGEDDSTSTSPSAEPSLLEKPKPYPSAPRICGLGDETNFVGA
NQQEYHGVRGEKYGFYLIVNDAFFDAGPTLRGIISKPSRTGHKLQHEQQR
*
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