prot_Ecto-sp13_S_contig16311.4574.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16311.4574.1
Unique Nameprot_Ecto-sp13_S_contig16311.4574.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length60
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16311.4574.1 vs. uniprot
Match: D8LHG3_ECTSI (Serine palmitoyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHG3_ECTSI)

HSP 1 Score: 109 bits (273), Expect = 2.900e-27
Identity = 57/59 (96.61%), Postives = 57/59 (96.61%), Query Frame = 0 
Query:    1 CAEGGVALTTSTYIPSEKFPPPPTIRITTNALHTREQLEQAVRVLAEATAAVLVQVEGL 59
            CAEGGVALTTSTYIPSEKFPPPPTIRITTNALHTREQLEQAVRVLAEATAA LV VEGL
Sbjct:  316 CAEGGVALTTSTYIPSEKFPPPPTIRITTNALHTREQLEQAVRVLAEATAAALVPVEGL 374
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BLAST of mRNA_Ecto-sp13_S_contig16311.4574.1 vs. uniprot
Match: A0A6H5KV36_9PHAE (Aminotran_1_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV36_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 4.730e-26
Identity = 56/59 (94.92%), Postives = 56/59 (94.92%), Query Frame = 0 
Query:    1 CAEGGVALTTSTYIPSEKFPPPPTIRITTNALHTREQLEQAVRVLAEATAAVLVQVEGL 59
            CAEGGVALTTSTYIPSEKFPPPPTIRITTNALHTREQLEQAVRVLAEATAA LV  EGL
Sbjct:  522 CAEGGVALTTSTYIPSEKFPPPPTIRITTNALHTREQLEQAVRVLAEATAAALVPAEGL 580
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16311.4574.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHG3_ECTSI2.900e-2796.61Serine palmitoyltransferase n=1 Tax=Ectocarpus sil... [more]
A0A6H5KV36_9PHAE4.730e-2694.92Aminotran_1_2 domain-containing protein n=1 Tax=Ec... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16311contigEcto-sp13_S_contig16311:2210..2389 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16311.4574.1mRNA_Ecto-sp13_S_contig16311.4574.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16311 2210..2389 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16311.4574.1 ID=prot_Ecto-sp13_S_contig16311.4574.1|Name=mRNA_Ecto-sp13_S_contig16311.4574.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=60bp
CAEGGVALTTSTYIPSEKFPPPPTIRITTNALHTREQLEQAVRVLAEATA
AVLVQVEGL*
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