prot_Ecto-sp13_S_contig163.4566.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig163.4566.1
Unique Name	prot_Ecto-sp13_S_contig163.4566.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	229

Homology

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BLAST of mRNA_Ecto-sp13_S_contig163.4566.1 vs. uniprot
Match: A0A6H5L0S8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0S8_9PHAE)

HSP 1 Score: 297 bits (760), Expect = 1.640e-89
Identity = 178/229 (77.73%), Postives = 182/229 (79.48%), Query Frame = 0

Query:    1 SSLSPGLSPSPSARPTDSELGVGGRSSAVAATGEEEGGTAVVAGGTITHEHDRKGLLPSPRRRLSTQSDDQAEEPTGVVRGDSTPRKTRTHDRSARGTDHETGTQVTFQASGTGAEAGGADAATIRALRAELSTLREHVLRSEQKREAQLRELGTRLAVQERRSGPERSGSATSTALREQGEREGAAAIGTTALVVGEAVDTGRDKGGCRDTPRGAVVQNPFAGTGGGA 229
            SS SPGLSPSPSARPTDSELGVGGRSSA A  GE                             LSTQSDDQAEEP GV RG ST R+TR HDRSARGTD ETGTQVTFQASGTGAEAGG DAATIRALRAELSTLREHVLRSEQKREAQLRELGTRLAVQERRSGPERSGS TST LRE+GEREG  AIGT ALVVGEAV+T RDKGGCRDTP GAVV+NPFAGTGGGA
Sbjct:  219 SSPSPGLSPSPSARPTDSELGVGGRSSAAAPIGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSTQSDDQAEEPIGVARGGSTLRRTRAHDRSARGTDDETGTQVTFQASGTGAEAGGGDAATIRALRAELSTLREHVLRSEQKREAQLRELGTRLAVQERRSGPERSGSTTSTTLREEGEREGVTAIGTAALVVGEAVETARDKGGCRDTPTGAVVRNPFAGTGGGA 447

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BLAST of mRNA_Ecto-sp13_S_contig163.4566.1 vs. uniprot
Match: D8LQ68_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ68_ECTSI)

HSP 1 Score: 272 bits (696), Expect = 1.140e-80
Identity = 169/230 (73.48%), Postives = 174/230 (75.65%), Query Frame = 0

Query:    1 SSLSPGLSPSPSARPTDSELG-VGGRSSAVAATGEEEGGTAVVAGGTITHEHDRKGLLPSPRRRLSTQSDDQAEEPTGVVRGDSTPRKTRTHDRSARGTDHETGTQVTFQASGTGAEAGGADAATIRALRAELSTLREHVLRSEQKREAQLRELGTRLAVQERRSGPERSGSATSTALREQGEREGAAAIGTTALVVGEAVDTGRDKGGCRDTPRGAVVQNPFAGTGGGA 229
            SS SPGLSPSPSARPTDSELG                                           LSTQSDDQAEEP GV RGDSTPR++R HDRSA GTD E G QVTFQAS TGAEAGG DAATIRALRAELSTLREHVLRSEQKREAQLRELGTRLAVQERRSGPERSGSATSTALRE+GERE  AAIGT ALVVGEAV+TGRDKGGCRDTPRGAVV+NPFAGTGGGA
Sbjct:  243 SSPSPGLSPSPSARPTDSELGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSTQSDDQAEEPIGVARGDSTPRRSRAHDRSAHGTDDEAGAQVTFQASETGAEAGGEDAATIRALRAELSTLREHVLRSEQKREAQLRELGTRLAVQERRSGPERSGSATSTALREEGEREAVAAIGTAALVVGEAVETGRDKGGCRDTPRGAVVRNPFAGTGGGA 472

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig163.4566.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig163.4566.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5L0S8_9PHAE	1.640e-89	77.73	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LQ68_ECTSI	1.140e-80	73.48	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 125..145

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig163	contig	Ecto-sp13_S_contig163:798..1484 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig163.4566.1	mRNA_Ecto-sp13_S_contig163.4566.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig163 798..1486 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig163.4566.1 ID=prot_Ecto-sp13_S_contig163.4566.1|Name=mRNA_Ecto-sp13_S_contig163.4566.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=229bp
SSLSPGLSPSPSARPTDSELGVGGRSSAVAATGEEEGGTAVVAGGTITHE
HDRKGLLPSPRRRLSTQSDDQAEEPTGVVRGDSTPRKTRTHDRSARGTDH
ETGTQVTFQASGTGAEAGGADAATIRALRAELSTLREHVLRSEQKREAQL
RELGTRLAVQERRSGPERSGSATSTALREQGEREGAAAIGTTALVVGEAV
DTGRDKGGCRDTPRGAVVQNPFAGTGGGA