mRNA_Ecto-sp13_S_contig1627.4542.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1627.4542.1 vs. uniprot
Match: A0A6H5LQR5_9PHAE (JmjC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQR5_9PHAE) HSP 1 Score: 1796 bits (4653), Expect = 0.000e+0 Identity = 926/1078 (85.90%), Postives = 964/1078 (89.42%), Query Frame = 1
Query: 19 MGSVVRRRKRVPGARESGGRSDELEQPVRSIGHQPP--FHNKRSSFTTRAVLLLIMLAVLVLFWYVFGTTLRNIAAGIPISRKGYRVGSVSGVVSEGFHARRRVMARGGVANPRERAIGEPAGLVFQETWKEEGKLLPAATLFAAAGPAVVVLDRADHLQNVIRRCMDADGCDSEGITREIRSQVSALVLEGSKSAAKPESAPREGDARGDCDASSSPLRLIAGHVDDATDDPSRPTGRDDTATPGELICARGYDGGPGRELDEGGVGAALSLATAASAGSRVGKGEEDVLAEAAFCDDGGKGQALEGRIGGGWCDAWSSGQGGRGGDAELWTTVLVASGWRWDEVETLLEVFPGTPWLYLYHEGDDGTSKCCLQSSSRYTGMGPMHDSKHNGHGHGVAMASSHLTAGAAARVLTRLFGAKLHPVGELAMSQLHARHATTDYEELSANGSPHSAASAATDAAVAGFSSLGEGFPSDGSVSQADACRDLSRGSTKVLGGPFDTVWWWGSGDNLTSNRILERRRQGGVEGGSPCGSSSREIVGIAPSIESDAGRVSQQRKSHVRTGKAGGLGKKSGNSESEKGTGEKAQFHNSSSSSSVASKATFEATGEGEDRLENVKASPLPVEEEGLAMGEEPQRRWDRGLRRMVDRDSPSWMSSEVYSEPIERFSCPAEPEAGYPTEWPLLDLLANWNPGNASGVPERHFLGVCRFDYQTELHKAQAYSLREVPFIVYNVPELDRAVQEWSNPAKLTAALGDHLYSIDVSSSNRFLYYGKRSWDRPPGWTPPTRRILDTFDAWLRHALGIRRLEDHQPPRDNDHFVEASDGPGRTTDQSREDKDEDLLAPYGGEQCDRSPDRCADCSPDQEEEWFQGGRDSNAESEVVRGEETRQESPGSKAHYYLKFSSTVERPNRFVDRSLPFFVPPAQPLETYDDEFSESLAYDNYGFSPAEGDYSAGKRGRRRKRSRESRWAEQDAWPPHQRRRSEEALEGGEEEEPIDGATRKLEGAVGSDKDETDIFLRDASATKGIHCRLGMDGVMSEGHYDGSRNMVALLAGKRRWILSNPENCAHMHMFRKGHPSAR 3246
MGSVVRRR V G RE+GGRSDEL VRSIGHQ P HNKR+SFTTR +LLLI+L VLVL WY+FGT LR+I AGIPI RKGY VGSV V+SE FHARRR MARGGV N RER IGEPAGLVFQET +EGK LPAA LFAAAGP VVVLDRA+HLQNVIRRCMDADGCDSEGITREIRSQVSALVLEGSKSAAKPESA REGDARGDCDASSSP LI GHVDD D+PSRPTGRDDT TPGELICARGYDGGPG E DE G A+LSLATAASAGSRV KGEE VL EA FCDDGGKGQ LEGR+ GGWCDAWS G GGRGGDAELWTTVLVASGWRWDEVETLLEVFPGTPWLYLYHE DDGTSK CLQSS RY GM MHDSKHN GH VAMASS LTAGAAARVLTRLFGAKLHP GELAMSQLHARHA TD E+LSANG+PHSAA AAT +A AGF SLGE FPSDGSVSQADACRD TKVLGGPFDTVWWWGSGDNLTS+RILER RQGG EGGSPCGSSSRE VGIA S+E AGRV Q+RKSH TGKAGGLGKKSGNSES+KGTGEK QFHNSSS S VA ATFEAT EGEDR ++VKAS LPVEEEGLA+GE+PQRRWDRGLRRMVD DSPSWMSSEVYSEPIERFSCP EPEAGYPTEWPLLDLLANWNPGNASGVPERHFLGVCRF+YQTELHKA+AYSLREVPFIV+NVPELDRAVQEWSNPAKLTAALGDHLYSIDVSSSNRFLYYGKRSWDRP GWTPPTRRILDTFDAWLRHALGIRRLEDHQP RDN HFVEASDGPG+TTDQSR DKD+D LAPYGGEQCDRSPD Q EWFQGGRD+NA+SEVVRGEETRQESP KAHYYLKFSSTVERPNRFVDRSLPFFVPPAQPLET+DDEFSESLAYD+YG SPAEGDYSAGKRGRRRK SRESRWA+Q+AWPPHQRR+SEEALEGGE+EEP+DGATR LE AVGSDKDETDIFLRDASATKGIHCRLGMDGVMSEGHYDGSRNMVALLAGKRRWILSNP+NC HMHMFRKGHPSAR
Sbjct: 1 MGSVVRRRIIVSGGRETGGRSDELAHRVRSIGHQAPEPSHNKRTSFTTRVLLLLIILTVLVLCWYIFGTALRDIEAGIPIPRKGYPVGSVPSVISEVFHARRRAMARGGVVNHRERGIGEPAGLVFQETRNDEGKSLPAAALFAAAGPPVVVLDRAEHLQNVIRRCMDADGCDSEGITREIRSQVSALVLEGSKSAAKPESASREGDARGDCDASSSPSPLIVGHVDDEMDNPSRPTGRDDTETPGELICARGYDGGPGTEWDEEGGEASLSLATAASAGSRVVKGEEHVLMEAVFCDDGGKGQVLEGRVDGGWCDAWSPGHGGRGGDAELWTTVLVASGWRWDEVETLLEVFPGTPWLYLYHESDDGTSKPCLQSS-RYAGMRSMHDSKHNSRGHRVAMASSRLTAGAAARVLTRLFGAKLHPGGELAMSQLHARHAATDDEDLSANGAPHSAAPAATASAAAGFPSLGEVFPSDGSVSQADACRDPFEEGTKVLGGPFDTVWWWGSGDNLTSDRILERHRQGGAEGGSPCGSSSRETVGIASSVEDGAGRVPQRRKSHAGTGKAGGLGKKSGNSESQKGTGEKGQFHNSSSPS-VAPAATFEATREGEDRRDDVKASLLPVEEEGLAVGEDPQRRWDRGLRRMVDSDSPSWMSSEVYSEPIERFSCPEEPEAGYPTEWPLLDLLANWNPGNASGVPERHFLGVCRFNYQTELHKARAYSLREVPFIVFNVPELDRAVQEWSNPAKLTAALGDHLYSIDVSSSNRFLYYGKRSWDRPLGWTPPTRRILDTFDAWLRHALGIRRLEDHQPVRDNGHFVEASDGPGQTTDQSRADKDKDFLAPYGGEQCDRSPDXXXXXXXXQGAEWFQGGRDNNAKSEVVRGEETRQESPSRKAHYYLKFSSTVERPNRFVDRSLPFFVPPAQPLETHDDEFSESLAYDDYGLSPAEGDYSAGKRGRRRKWSRESRWADQNAWPPHQRRQSEEALEGGEDEEPVDGATRMLEDAVGSDKDETDIFLRDASATKGIHCRLGMDGVMSEGHYDGSRNMVALLAGKRRWILSNPQNCGHMHMFRKGHPSAR 1076
BLAST of mRNA_Ecto-sp13_S_contig1627.4542.1 vs. uniprot
Match: D7FMI1_ECTSI (JmjC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMI1_ECTSI) HSP 1 Score: 822 bits (2122), Expect = 1.210e-287 Identity = 397/434 (91.47%), Postives = 409/434 (94.24%), Query Frame = 1
Query: 1945 MVDRDSPSWMSSEVYSEPIERFSCPAEPEAGYPTEWPLLDLLANWNPGNASGVPERHFLGVCRFDYQTELHKAQAYSLREVPFIVYNVPELDRAVQEWSNPAKLTAALGDHLYSIDVSSSNRFLYYGKRSWDRPPGWTPPTRRILDTFDAWLRHALGIRRLEDHQPPRDNDHFVEASDGPGRTTDQSREDKDEDLLAPYGGEQCDRSPDRCADCSPDQEEEWFQGGRDSNAESEVVRGEETRQESPGSKAHYYLKFSSTVERPNRFVDRSLPFFVPPAQPLETYDDEFSESLAYDNYGFSPAEGDYSAGKRGRRRKRSRESRWAEQDAWPPHQRRRSEEALEGGEEEEPIDGATRKLEGAVGSDKDETDIFLRDASATKGIHCRLGMDGVMSEGHYDGSRNMVALLAGKRRWILSNPENCAHMHMFRKGHPSAR 3246
MVD +SPSWMSSEVYSEPI+RFSCP EPEAGYPTEWPLLDLLANWNPGNASGVPERHFLGVCRFDYQTELHKAQAYSLREVPFIV+NVPELDRAVQEWSNPAKLTAALGDHLYSIDVSSS+RFLYYGKRSWDRPPGWTPPTRRILDTFDAWLRHALGIRRLEDHQP RDNDH VEASDGPG+TTD SR DKD+D LAPYGGEQCDRS DR SPDQ EEWFQGGRDSNAES+VVRGEETRQESP SKAHYYLKFSSTVERPNRFVDRSLPFFVPPAQPLETYDDEFSESLAY++YGFSPAEGDY AGK+GRRRK SRESRW EQDAWPPHQRR SE+ LEGGEE+EP DG R LEGA GSDKDETDIFLRDASATKGIHCRLGMDGVMSEGHYDGSRNMVALLAGKRRWILSNP NCAHMHMFRKGHPSAR
Sbjct: 1 MVDGNSPSWMSSEVYSEPIKRFSCPEEPEAGYPTEWPLLDLLANWNPGNASGVPERHFLGVCRFDYQTELHKAQAYSLREVPFIVFNVPELDRAVQEWSNPAKLTAALGDHLYSIDVSSSHRFLYYGKRSWDRPPGWTPPTRRILDTFDAWLRHALGIRRLEDHQPARDNDHIVEASDGPGQTTDHSRADKDKDFLAPYGGEQCDRSQDRSQGRSPDQGEEWFQGGRDSNAESQVVRGEETRQESPASKAHYYLKFSSTVERPNRFVDRSLPFFVPPAQPLETYDDEFSESLAYNDYGFSPAEGDYPAGKKGRRRKSSRESRWTEQDAWPPHQRRHSEDELEGGEEQEPTDGEIRMLEGAAGSDKDETDIFLRDASATKGIHCRLGMDGVMSEGHYDGSRNMVALLAGKRRWILSNPHNCAHMHMFRKGHPSAR 434
BLAST of mRNA_Ecto-sp13_S_contig1627.4542.1 vs. uniprot
Match: D7FMI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMI0_ECTSI) HSP 1 Score: 643 bits (1658), Expect = 1.120e-218 Identity = 347/433 (80.14%), Postives = 363/433 (83.83%), Query Frame = 1
Query: 19 MGSVVRRRKRVPGARESGGRSDELEQPVRSIGHQP--PFHNKRSSFTTRAVLLLIMLAVLVLFWYVFGTTLRNIAAGIPISRKGYRVGSVSGVVSEGFHARRRVMARGGVANPRERAIGEPAGLVFQETWKEEGKLLPAATLFAAAGPAVVVLDRADHLQNVIRRCMDADGCDSEGITREIRSQVSALVLEGSKSAAKPESAPREGDARGDCDASSSPLRLIAGHVDDATDDPSRPTGRDDTATPGELICARGYDGGPGRELDEGGVGAALSLATAASAGSRVGKGEEDVLAEAAFCDDGGKGQALEGRIGGGWCDAWSSGQGGRGGDAELWTTVLVASGWRWDEVETLLEVFPGTPWLYLYHEGDDGTSKCCLQSSSRYTGMGPMHDSKHNGHGHGVAMASSHLTAGAAARVLTRLFGAKLHPVGELAMSQL 1311
MGSV+RRRKRVPG RE+GGRSDELEQPVR IGH P P HNKRSSFT RA+LLLI LAV+VL WYVFG LR+IAAG+PISRKGYRVG V GV+SEGFHARR MARGGVA+PRERAIGEPAGLVFQET +EG LPAA LFAAAGP VVVL+ A+HLQNVIRRC+DADGCDSEGITREIRSQVS LVLEGSKSAAKPESA RE DA GDCDASSS + G VDD DDPSR TGRDDTA+P ELI ARGYDG PG E LATAASAGSR+ K EE VLAEA FC DGGKGQALEGRI GGW DAWS GQG RGGDAELWTTVLVASGWRWDEVETLLEV P TPWLYLYHE DD TSK CLQSSSRY G MHDSKHNGHGHGVAMASS LTAGAAARVLTRLFGAKLHP GELAMSQ+
Sbjct: 1 MGSVLRRRKRVPGGREAGGRSDELEQPVRCIGHPPLEPSHNKRSSFTARALLLLITLAVVVLCWYVFGKALRDIAAGVPISRKGYRVGGVPGVISEGFHARRWAMARGGVAHPRERAIGEPAGLVFQETGNKEGTSLPAAALFAAAGPPVVVLEGAEHLQNVIRRCLDADGCDSEGITREIRSQVSVLVLEGSKSAAKPESASREDDATGDCDASSSSSPPVVGDVDDEIDDPSRATGRDDTASPRELIDARGYDGSPGTEWGGXXXXXXXXLATAASAGSRMEKSEEHVLAEALFCGDGGKGQALEGRIDGGWWDAWSPGQGRRGGDAELWTTVLVASGWRWDEVETLLEVLPETPWLYLYHERDDSTSKPCLQSSSRYAGTRSMHDSKHNGHGHGVAMASSRLTAGAAARVLTRLFGAKLHPGGELAMSQV 433
BLAST of mRNA_Ecto-sp13_S_contig1627.4542.1 vs. uniprot
Match: A0A835Z3G1_9STRA (JmjC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3G1_9STRA) HSP 1 Score: 155 bits (393), Expect = 5.760e-35 Identity = 127/481 (26.40%), Postives = 172/481 (35.76%), Query Frame = 1
Query: 1930 RGLRRMVDRDSPSWMSSEVYSEPIERFSCPAEPEAGYPTEWPLLDLLANWNPGNASGVPERHFLGVCRFDYQT--ELHKAQAYSLR--EVPFIVYNVPELDRAVQEWSNPAKLTAALGDHLYS---------------------------------IDVSSSNRFLYY--GKRSWDR---PPGWTPPTRRILDTFDAWLRHALGIRRLEDHQPPRDNDHFVEASDGPGRTTDQSREDKDEDLLAPYGGEQCDRSPDRCADCSPDQEEEWFQGGRDSNAESEVVRGEETRQESPGSKAHYYLKFSSTVERPNRFVDRSLPFFVPPAQPLETYDDEFSESLAYDNYGFSPAEGDYSAGKRGRRRKRSRESRWAEQDAWPPHQRRRSEEALEGGEEEEPIDGATRKLEGAVGSDKDETDIFLRDASATKGIHCRLGMDGVMSEGHYDGSRNMVALLAGKRRWILSNPENCAHMHMFRKGHPSAR 3246
+GL +VD ++P++MSS SEP E FSCP EP YP EWP+LDL+ NWNP NAS VP H+L +CRFDYQ +L KA A++ R E PFIV+N P+L A Q W +P L A G + +VS+ N F+YY GK R P W PT T+ WL AL D GR E W+ D + + ++R + + L ++ V PN +F D + +KGI+CR GM GV++E H+DGSRNMVA+++G+RRWILS+P +C M++ HPS R
Sbjct: 514 KGLDVVVDAEAPAFMSSRTASEPFEPFSCPDEPPEDYPREWPMLDLIHNWNPDNASYVPPNHYLSICRFDYQDPQDLAKASAFAYRDAEKPFIVFNAPQLTAAAQRWQDPLYLDKATGAKTFRQVVPQLQLLLLLLLPPPLLPLXXXXXXXLLLELTEVSADNHFMYYKAGKAKPSRVIVPENWEAPTDLQYKTYREWLYKAL-------------------TDDDEGRG------------------------------------EHWYLSMFDKD--TALIREDVS-----------ILDAAAAVRAPN---------------------------------------------------------------------------------------------------------LFFADPTKSKGINCRFGMHGVVAEAHFDGSRNMVAMVSGRRRWILSHPRSCRGMYLLPLDHPSGR 821
BLAST of mRNA_Ecto-sp13_S_contig1627.4542.1 vs. uniprot
Match: A0A7S3GTU2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GTU2_9STRA) HSP 1 Score: 122 bits (306), Expect = 1.310e-24 Identity = 63/189 (33.33%), Postives = 107/189 (56.61%), Query Frame = 1
Query: 1945 MVDRDSPSWM--SSEVYSEPIERFSCPAEPEAGYPTEWPLLDLLANWNPGNASGVPERHFLGVCRFDYQTELHKAQAYSLR--EVPFIVYNVPELDRAVQEWSNPAKLTAALGDHLYSIDVSSSNRFLYY--GKRSWDRPP---GWTPPTRRILDTFDAWLRHALGIRR--LEDHQPPRDNDHFVEASD 2478
+ +++ SW+ ++ +S PI+ +CP PE+ YPT + +LD+ NWNP +++ +P H+ +C FDY E + AY R EVPF+ YN+PE+D V++WS+ + + LG Y + S N F+Y+ + ++ R W PPT + TF+ W+ A+ + +ED RD+ +F +SD
Sbjct: 450 LEEKEFQSWLPFANHHHSRPIQPANCPYHPESTYPTAYSMLDITNNWNP-DSTDIPPMHYDTLCHFDYANETQRESAYLYRAAEVPFVAYNIPEVDAVVKKWSDVDYMHSLLGGKKYRTETSEDNHFMYWRQARNTFLRTAEGANWKPPTSIVSTTFEEWVEFAVKNQNKSIED----RDHQYFRVSSD 633
BLAST of mRNA_Ecto-sp13_S_contig1627.4542.1 vs. uniprot
Match: A0A7S2FL26_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FL26_9STRA) HSP 1 Score: 117 bits (293), Expect = 5.340e-24 Identity = 56/122 (45.90%), Postives = 74/122 (60.66%), Query Frame = 1
Query: 2011 SCPAEPEAGYPTEWPLLDLLANWNPGNASGVPERHFLGVCRFDYQTELHKAQAYSLREVPFIVYNVPELDRAVQEWSNPAKLTAALGDHLYSIDVSSSNRFLYYGKRSWDRPPG---WTPPT 2367
+CPA P YP ++P++DL+ NWNP A P +H+ +CRFDY T+L KA AY E+PFIVYN PE + VQ+W+ P L LG Y +VS +N F+Y+ S R G W PPT
Sbjct: 121 NCPAVPPPNYPEQFPIMDLIDNWNPDQAE-APAKHYHALCRFDYATDLEKAFAYREAELPFIVYNTPEAEDVVQKWNQPDYLEKFLGTERYRTEVSHNNHFMYFSGSS-PRGKGNKAWRPPT 240
BLAST of mRNA_Ecto-sp13_S_contig1627.4542.1 vs. uniprot
Match: K0TCF5_THAOC (JmjC domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TCF5_THAOC) HSP 1 Score: 115 bits (287), Expect = 1.290e-22 Identity = 118/430 (27.44%), Postives = 181/430 (42.09%), Query Frame = 1
Query: 1996 PIERFSCPAEPEAGYPTEWPLLDLLANWNPGNASGVPERHFLGVCRFDYQTELHKAQAYSLREVPFIVYNVPELDRAVQEWSNPA---KLTAALGDHLYSIDVSSSNRFLYYGKRSWDRPPGWTPPTRRILDTFDAWLRHALG--IRRLEDHQPPRDNDHFVEASDGPGRTTDQSREDKDEDLLAPYGGEQCDRSPDRCADCSPDQEEEW-FQGGRDSNAESEVVRGEETRQESPGSKAHYYLKFSSTVERPNRFVDRSLPFFVPPAQPLETYDDEFSESLAYDNYGFSPAEGDYSAGKRGRRRKRSRESRWAEQDAWPPHQRRR-------SEEALEGGEEEEPIDGATRKLEGAVGSDKDETDIFLRDASATKGIHCRLGMDGVMSEGHYDGSRNMVALLAGKRRWILSNPENCAHMHMFRKGHPSAR 3246
P + +CP P GYPT+WP+L++L NW+P + + E + G C FD++TE +KA Y E+PFI+ N P R + W++P KL D + + S +N F+Y+ +D D R A IRR E+ EA DG GR Q+ K ++ + R D EE + + + E+++V + RQ S E ++ + + PP + L ++E LA+ N D PH R + + G E D T + +G +E +L + KGIHCR GM GV++E H+D SRN ++LL G+RR+IL++P C HM++ +GHPSAR
Sbjct: 192 PYDIHNCPEFPPDGYPTQWPVLEVLDNWSPDDPT-PHEEIYQGWCVFDFRTEKNKANNYRHAELPFIMRNDPAAARTAERWNHPGYLDKLLMGNEDTMRRTEYSPNNHFMYW------------------VDKRDRSERRAAKKTIRRAEEEGN--------EAHDGFGRGA-QAEMAKAMEIYS------------RVNDLKDKLEEAVDYADDHEDDDEAQLVVKKLKRQ------------LSKAKELRDQEAEDG---WKPPTENLRML---YTEWLAHANVTDDKLGPDN------------------------PHWYFRLIGCGTMGDGDCDKGSSEWLFDELTY-FQPRMG---EERPFYLIEPKQQKGIHCRFGMKGVIAENHFDLSRNAISLLGGQRRYILAHPNQCVHMNLLPRGHPSAR 535
BLAST of mRNA_Ecto-sp13_S_contig1627.4542.1 vs. uniprot
Match: A0A7S4J512_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J512_9STRA) HSP 1 Score: 107 bits (267), Expect = 1.930e-20 Identity = 59/172 (34.30%), Postives = 89/172 (51.74%), Query Frame = 1
Query: 1981 EVYSEPIERFSCPAEPEAGYPTEWPLLDLLANWNPGNASGVPERHFLGVCRFDYQTELHKAQAYSLREVPFIVYNVPELDRAVQEWSNPAKLTAALG-DHLYSIDVSSSNRFLYYGKRSWDR-PPGWTPPTRRILDTFDAWLRHALGIRRLEDHQPPRDNDHFVEASDGPGR 2490
E S P + CP+ P GYP WP+LD+L NWNP +A+ R + G+CRFD TE KA Y E+PF++ + P + V+ W+ P LT LG Y D + +N +++ ++ R P GW PT ++ WL A RR ++ + D+ H+ +G R
Sbjct: 183 EGESMPYDVNDCPSAPPEGYPMAWPVLDVLENWNPDDAT-PRARIYQGLCRFDAATEYDKALTYRKAELPFVIRDDPVVLPTVERWNQPEYLTRILGRTATYRSDYAETNHLMFFRTKNLKRVPEGWKEPTTERDISYPDWLEKA---RRADEEEWEPDHPHWYFRLNGKSR 350
BLAST of mRNA_Ecto-sp13_S_contig1627.4542.1 vs. uniprot
Match: A0A6H5JFB5_9PHAE (JmjC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFB5_9PHAE) HSP 1 Score: 86.3 bits (212), Expect = 2.350e-13 Identity = 36/68 (52.94%), Postives = 50/68 (73.53%), Query Frame = 1
Query: 3043 ETDIFLRDASATKGIHCRLGMDGVMSEGHYDGSRNMVALLAGKRRWILSNPENCAHMHMFRKGHPSAR 3246
E +IFL D +GIHCR GM GV++E H+DGSRNMVA+++G RRWI+++P C M++ + HPS R
Sbjct: 672 EGNIFLVDPRGQRGIHCRFGMPGVIAEAHFDGSRNMVAMVSGVRRWIMAHPNQCKSMYLLPRAHPSGR 739
BLAST of mRNA_Ecto-sp13_S_contig1627.4542.1 vs. uniprot
Match: A0A7S3PDC1_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PDC1_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 1.190e-11 Identity = 33/66 (50.00%), Postives = 48/66 (72.73%), Query Frame = 1
Query: 3049 DIFLRDASATKGIHCRLGMDGVMSEGHYDGSRNMVALLAGKRRWILSNPENCAHMHMFRKGHPSAR 3246
+I+L + KGIHCR GM GV++E H+D RN +A+L G+RR+ILS+P C ++ + +GHPSAR
Sbjct: 399 EIYLGNPKEQKGIHCRFGMKGVIAENHFDAGRNSIAVLGGRRRYILSHPRQCVNLALLPRGHPSAR 464 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1627.4542.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1627.4542.1 >prot_Ecto-sp13_S_contig1627.4542.1 ID=prot_Ecto-sp13_S_contig1627.4542.1|Name=mRNA_Ecto-sp13_S_contig1627.4542.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1122bp MGSVVRRRKRVPGARESGGRSDELEQPVRSIGHQPPFHNKRSSFTTRAVLback to top mRNA from alignment at Ecto-sp13_S_contig1627:386..13163- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1627.4542.1 ID=mRNA_Ecto-sp13_S_contig1627.4542.1|Name=mRNA_Ecto-sp13_S_contig1627.4542.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=12778bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1627:386..13163- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1627:386..13163- >mRNA_Ecto-sp13_S_contig1627.4542.1 ID=mRNA_Ecto-sp13_S_contig1627.4542.1|Name=mRNA_Ecto-sp13_S_contig1627.4542.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3366bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1627:386..13163- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |