prot_Ecto-sp13_S_contig1625.4535.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1625.4535.1
Unique Nameprot_Ecto-sp13_S_contig1625.4535.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length297
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1625.4535.1 vs. uniprot
Match: D7FYQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYQ2_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 1.120e-24
Identity = 65/96 (67.71%), Postives = 69/96 (71.88%), Query Frame = 0 
Query:  189 IDVSMARRVEIDAQNAELQVVVDXXXXXXXXXXXXXXA-----VKNEVEDLSTRLETRDKERKEQELLREMLDSAHMVFRRESPEEAASEEVRSVR 279
            IDVSMARRVEIDAQNAELQ+VVD                    VK EVEDLSTRLETRDKERKEQELLREMLDSAHMVFRRESPEE  +  ++  R
Sbjct:    8 IDVSMARRVEIDAQNAELQLVVDEADSRKRQLQEQVGRLQVDEVKTEVEDLSTRLETRDKERKEQELLREMLDSAHMVFRRESPEEVGATSLQRSR 103
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1625.4535.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FYQ2_ECTSI1.120e-2467.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 203..244
NoneNo IPR availableCOILSCoilCoilcoord: 147..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1625contigEcto-sp13_S_contig1625:10185..14743 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1625.4535.1mRNA_Ecto-sp13_S_contig1625.4535.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1625 10185..14743 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1625.4535.1 ID=prot_Ecto-sp13_S_contig1625.4535.1|Name=mRNA_Ecto-sp13_S_contig1625.4535.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=297bp
MTAATLTGGATGAAPSPLRTRSTSSRKGLGKISRNPANENPRPLGGTRGG
GGTNNITESRKHEAFESGNPRDAYSSVSHLKGNLDSLSFAIGLREGEGQE
GALERLLPMLKIQPRPAGDANRRGDKTREKGYLECEHPDCIVREEKIKKL
QELIEEEQEGLERLTFEIDSLHERHTRATAEMETLDDQIDVSMARRVEID
AQNAELQVVVDEADSRKRQLQEQVDAVKNEVEDLSTRLETRDKERKEQEL
LREMLDSAHMVFRRESPEEAASEEVRSVRDLPALLDPAKAEAASML*
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