prot_Ecto-sp13_S_contig16241.4529.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16241.4529.1
Unique Nameprot_Ecto-sp13_S_contig16241.4529.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length138
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16241.4529.1 vs. uniprot
Match: A0A6H5KUF8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUF8_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 1.300e-18
Identity = 84/93 (90.32%), Postives = 86/93 (92.47%), Query Frame = 0 
Query:   34 MASSIDIHDAAQQGNVTAIEAYIRSGGNMYMQDKQGNPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHEGCAMLLRGNTP 126
            MASSIDIHDAAQQGNVTAIEAYIR GGNMY+QDKQGNPP   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   H+GCAMLLRGNTP
Sbjct:    1 MASSIDIHDAAQQGNVTAIEAYIRLGGNMYVQDKQGNPPLHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNGHDGCAMLLRGNTP 93
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16241.4529.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KUF8_9PHAE1.300e-1890.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 68..97
e-value: 0.047
score: 22.8
coord: 101..130
e-value: 200.0
score: 10.2
coord: 35..64
e-value: 4400.0
score: 0.2
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 68..100
score: 9.751
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 40..122
e-value: 7.4E-9
score: 36.1
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 35..121
score: 21.561
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 24..125
e-value: 1.4E-20
score: 75.7
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 17..123
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 40..121
NoneNo IPR availablePANTHERPTHR24134:SF1ANKYRIN REPEAT AND SOCS BOX PROTEIN 8coord: 40..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16241contigEcto-sp13_S_contig16241:1374..3510 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16241.4529.1mRNA_Ecto-sp13_S_contig16241.4529.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16241 1374..3512 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16241.4529.1 ID=prot_Ecto-sp13_S_contig16241.4529.1|Name=mRNA_Ecto-sp13_S_contig16241.4529.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=138bp
TLNSSGAPRGTHTRSLWWAKHRVVAAHLLFLDEMASSIDIHDAAQQGNVT
AIEAYIRSGGNMYMQDKQGNPPLHVASWHGREASVAAFLDAGVDPAALNR
LGQTPLHFARKKGHEGCAMLLRGNTPPPFRSRSSSPRQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf