prot_Ecto-sp13_S_contig16162.4491.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16162.4491.1
Unique Nameprot_Ecto-sp13_S_contig16162.4491.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length130
Homology
BLAST of mRNA_Ecto-sp13_S_contig16162.4491.1 vs. uniprot
Match: A0A6H5KRW8_9PHAE (Ribosom_S30AE_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRW8_9PHAE)

HSP 1 Score: 239 bits (609), Expect = 1.660e-77
Identity = 123/129 (95.35%), Postives = 125/129 (96.90%), Query Frame = 0
Query:    1 MYASVDQVTDRIQRKLRRFKERKVAGMRGRSGLGSLSEKTAEKDMDAAAAEAADEDPFEDKYGDKPEEMAVMKTKSFPMPAISVEEAVTCLEYIGHDFYLFRNEETDEVNVVYKRKSGGVGLIEPESEK 129
            MYASVDQVTDRIQRKLRRFKERKVAGMRGRSGL +LSEKTAEKDMDAAA EAADEDPFEDKYGDKPE M VMKTKSFPMPAISVEEAVTCLEYIGHDFYLFRNEET+EVNVVYKRKSGGVGLIEPESEK
Sbjct:  141 MYASVDQVTDRIQRKLRRFKERKVAGMRGRSGLRALSEKTAEKDMDAAAVEAADEDPFEDKYGDKPEAMTVMKTKSFPMPAISVEEAVTCLEYIGHDFYLFRNEETNEVNVVYKRKSGGVGLIEPESEK 269          
BLAST of mRNA_Ecto-sp13_S_contig16162.4491.1 vs. uniprot
Match: A0A6T7EQW1_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A6T7EQW1_9EUKA)

HSP 1 Score: 114 bits (284), Expect = 4.330e-30
Identity = 66/130 (50.77%), Postives = 85/130 (65.38%), Query Frame = 0
Query:    1 MYASVDQVTDRIQRKLRRFKERK----VAGMRGRSGLGSLSEKTAEKDMDAAAAEAADEDPFEDKYGDKPEEMAVMKTKSFPMPAISVEEAVTCLEYIGHDFYLFRNEETDEVNVVYKRKSGGVGLIEPE 126
            MYAS+D+++DR  RKLR++KERK      G +  S +  L E+  E++    AAE+      +  +        V++ KSFPMP ISV+EAV CLEYI HDFY FRN ET+E+NVVYKR SG VGLIEPE
Sbjct:    2 MYASLDKLSDRFGRKLRKYKERKRPRGAVGTQQLSSIDLLEEEGDEEEEADVAAESGTVPLAQTSW-------EVVRKKSFPMPPISVDEAVLCLEYIDHDFYAFRNAETNEINVVYKRNSGDVGLIEPE 124          
BLAST of mRNA_Ecto-sp13_S_contig16162.4491.1 vs. uniprot
Match: Q7XYJ6_BIGNA (Ribosomal protein rpS22 (Fragment) n=1 Tax=Bigelowiella natans TaxID=227086 RepID=Q7XYJ6_BIGNA)

HSP 1 Score: 114 bits (285), Expect = 1.090e-29
Identity = 63/133 (47.37%), Postives = 91/133 (68.42%), Query Frame = 0
Query:    2 YASVDQVTDRIQRKLRRFKERKVAGMRGRSGLGSL--SEKTAEKDMDAAAAEAADEDPFEDKYGDKPE------EMAVMKTKSFPMPAISVEEAVTCLEYIGHDFYLFRNEETDEVNVVYKRKSGGVGLIEPE 126
            Y+S+D VTD + RKLR++KERK  G R  SG+ +   ++ +   D++ AA +  D D  +++Y   PE      +++V++ K FPMP IS+E+A  CL+Y+ HDFY+FRN ET E+NVVY+R  GGVGLIEPE
Sbjct:   38 YSSIDLVTDLVNRKLRKYKERKE-GKRTASGVRTFYTNDISDSSDVEGAAVQGQD-DVQQEEYSGIPEGYAPVEDVSVVRRKKFPMPPISIEDATLCLDYLDHDFYVFRNSETKEINVVYRRAEGGVGLIEPE 168          
BLAST of mRNA_Ecto-sp13_S_contig16162.4491.1 vs. uniprot
Match: A0A6V1KPF4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1KPF4_HETAK)

HSP 1 Score: 113 bits (283), Expect = 1.460e-28
Identity = 68/132 (51.52%), Postives = 83/132 (62.88%), Query Frame = 0
Query:    1 MYASVDQVTDRIQRKLRRFKERKVAGMRGRSGLGSLSEKTAEKDMDAAAA--EAADEDPFEDKYGDKPEE--MAVMKTKSFPMPAISVEEAVTCLEYIGHDFYLFRNEETDEVNVVYKRKSGGVGLIEPESE 128
            MY ++D V+D I  KLR++KE+++   RG          TAE  MD      E  D D  ED Y D      M V+K KSFPMP +SVE+AV  LEYI HDFY+FRNE+T EVNVVYKR SGGVG I+PE +
Sbjct:  124 MYGTIDLVSDTIFMKLRKYKEKRIDRKRG----------TAEARMDPVVLPEEVEDSDTEEDVYNDLDASVNMDVVKEKSFPMPPMSVEDAVVSLEYIDHDFYVFRNEKTSEVNVVYKRNSGGVGHIQPERD 245          
BLAST of mRNA_Ecto-sp13_S_contig16162.4491.1 vs. uniprot
Match: A0A835ZQC8_9STRA (Ribosomal protein rpS22, plastidal n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZQC8_9STRA)

HSP 1 Score: 112 bits (280), Expect = 6.110e-28
Identity = 62/128 (48.44%), Postives = 87/128 (67.97%), Query Frame = 0
Query:    1 MYASVDQVTDRIQRKLRRFKERKVAGMRGRSGLGSLSEKTAEKDMDAAAAEAADEDPFEDKYGDKPEEMAVMKTKSFPMPAISVEEAVTCLEYIGHDFYLFRNEETDEVNVVYKRKSGGVGLIEPESE 128
            MY+S+D V+DR+ RKLR++KER +   R R+ +   + +  E+     +A+  + D  +D  G    +M+V+K+KSFPMP  +VE+AVT LEYI HDFY+FRN  T EVNVVYKR  GGVG I+PE +
Sbjct:  139 MYSSIDLVSDRMGRKLRKYKERSLTQKRSRTSISEAAGEV-EEAFTPDSADGGEPDYADD--GLPHVDMSVVKSKSFPMPPCTVEDAVTALEYIDHDFYVFRNSATSEVNVVYKRNHGGVGHIQPERD 263          
BLAST of mRNA_Ecto-sp13_S_contig16162.4491.1 vs. uniprot
Match: A0A7S2TTI5_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TTI5_9EUKA)

HSP 1 Score: 111 bits (278), Expect = 3.960e-27
Identity = 59/133 (44.36%), Postives = 85/133 (63.91%), Query Frame = 0
Query:    2 YASVDQVTDRIQRKLRRFKERKVAGMRGRSGLGSLSEKTAEKDMDAAAAEAADEDPFEDKYGDKP------EEMAVMKTKSFPMPAISVEEAVTCLEYIGHDFYLFRNEETDEVNVVYKRKSGGVGLIEPESE 128
            Y+S+D VTD I RK+R++KERK  G R  SG+ +          DA       ED  + ++   P      E++++++ K FPMP I+VE+A  CL+Y+ HDFY+FRN +T E+NVVY+R  GGVGLIEPE++
Sbjct:  192 YSSIDLVTDLINRKMRKYKERKF-GRRTNSGVKTFYRDDISDSSDAGEMVQVGEDDVQGEFEPVPNDYKPMEDVSLVRKKKFPMPPITVEDATLCLDYLDHDFYVFRNADTKEINVVYRRAEGGVGLIEPEAQ 323          
BLAST of mRNA_Ecto-sp13_S_contig16162.4491.1 vs. uniprot
Match: A0A7S2CSI1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CSI1_9STRA)

HSP 1 Score: 109 bits (273), Expect = 4.840e-27
Identity = 65/131 (49.62%), Postives = 82/131 (62.60%), Query Frame = 0
Query:    1 MYASVDQVTDRIQRKLRRFKERK-----VAGMRGRSGLGSLSEKTAEKDMDAAAAEAADEDPFEDKYGDKPEEMAVMKTKSFPMPAISVEEAVTCLEYIGHDFYLFRNEETDEVNVVYKRKSGGVGLIEPE 126
            MYA++D V D + RKLR+FKERK      + +R    L    ++  E   + A A A +   F D        M+++K KSF M  I+VE+AV CLEYI HDFY+FRN+ET EVNVVYKR SGGVG IEPE
Sbjct:  126 MYATIDAVADSLARKLRKFKERKDKKQSSSAIRDADALNLSEDEEVESPEEDAFAGAVEIPRFVD--------MSIVKQKSFNMEPITVEDAVLCLEYIDHDFYVFRNKETGEVNVVYKRNSGGVGHIEPE 248          
BLAST of mRNA_Ecto-sp13_S_contig16162.4491.1 vs. uniprot
Match: A0A6V3PVS7_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A6V3PVS7_9EUKA)

HSP 1 Score: 110 bits (276), Expect = 7.660e-27
Identity = 59/133 (44.36%), Postives = 85/133 (63.91%), Query Frame = 0
Query:    2 YASVDQVTDRIQRKLRRFKERKVAGMRGRSGLGSLSEKTAEKDMDAAAAEAADEDPFEDKYGDKP------EEMAVMKTKSFPMPAISVEEAVTCLEYIGHDFYLFRNEETDEVNVVYKRKSGGVGLIEPESE 128
            Y+S+D VTD I RK+R++KERK  G R  SG+ +          DA       ED  + ++   P      E++++++ K FPMP IS+E+A  CL+Y+ HDFY+FRN +T E+NVVY+R  GGVGLIEPE++
Sbjct:  191 YSSIDLVTDLINRKMRKYKERKN-GKRTNSGVKTFYRDDISDSSDAGEMLPIGEDDVQGEFEPVPNDYKPMEDVSLVRKKKFPMPPISIEDATLCLDYLDHDFYVFRNADTKEINVVYRRAEGGVGLIEPEAQ 322          
BLAST of mRNA_Ecto-sp13_S_contig16162.4491.1 vs. uniprot
Match: W7T4W9_9STRA (Sigma 54 modulation protein ribosomal protein s30ea n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T4W9_9STRA)

HSP 1 Score: 110 bits (275), Expect = 1.490e-26
Identity = 63/127 (49.61%), Postives = 84/127 (66.14%), Query Frame = 0
Query:    1 MYASVDQVTDRIQRKLRRFKERKVAGMRGRSGLGSLSEKTAEKDMDAAAAEAADEDPFEDKYGD--KPEEMAVMKTKSFPMPAISVEEAVTCLEYIGHDFYLFRNEETDEVNVVYKRKSGGVGLIEP 125
            MYAS+D V+ RI R LR+FK+RK+ G R         E+  E +M++     A  +  E  + D  K  +M V+K K F MPA+S  +A+ CLEYIGHDFY+FRNE++ E+NVVYKRK GGVG+IEP
Sbjct:  220 MYASIDLVSHRITRLLRKFKDRKI-GKRKEVNF----EEDGESEMESLGLTGAGAEGGEGGFQDPAKGVDMRVVKRKQFDMPAMSTADAIVCLEYIGHDFYVFRNEDSGEINVVYKRKLGGVGVIEP 341          
BLAST of mRNA_Ecto-sp13_S_contig16162.4491.1 vs. uniprot
Match: A0A835ZBG9_9STRA (Ribosomal protein S30Ae/sigma 54 modulation protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBG9_9STRA)

HSP 1 Score: 107 bits (267), Expect = 5.210e-26
Identity = 60/128 (46.88%), Postives = 82/128 (64.06%), Query Frame = 0
Query:    1 MYASVDQVTDRIQRKLRRFKERKVAGMRGRSGLGSLSEKTAEKDMDAAAAEAADEDPFEDKYGDKPEEMAVMKTKSFPMPAISVEEAVTCLEYIGHDFYLFRNEETDEVNVVYKRKSGGVGLIEPESE 128
            MYAS+D VTD + RKLR++KER +   R R+ L  ++ ++  K       E  +E+ FE   G    +M+V+K K FPMP  +VE+AV  + YI HDFY+FRN  T E+NVVYKR  GGVG I+PE +
Sbjct:  138 MYASIDLVTDSMARKLRKYKERSLTQKRHRAPLSEIAGESEAKWTSDDGDE--EEEGFEGGDGVPRVDMSVVKKKEFPMPPCTVEDAVVAMAYIDHDFYVFRNSATGEINVVYKRNHGGVGHIQPERD 263          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16162.4491.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KRW8_9PHAE1.660e-7795.35Ribosom_S30AE_C domain-containing protein n=2 Tax=... [more]
A0A6T7EQW1_9EUKA4.330e-3050.77Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
Q7XYJ6_BIGNA1.090e-2947.37Ribosomal protein rpS22 (Fragment) n=1 Tax=Bigelow... [more]
A0A6V1KPF4_HETAK1.460e-2851.52Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835ZQC8_9STRA6.110e-2848.44Ribosomal protein rpS22, plastidal n=1 Tax=Tribone... [more]
A0A7S2TTI5_9EUKA3.960e-2744.36Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A7S2CSI1_9STRA4.840e-2749.62Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6V3PVS7_9EUKA7.660e-2744.36Hypothetical protein n=2 Tax=Lotharella globosa Ta... [more]
W7T4W9_9STRA1.490e-2649.61Sigma 54 modulation protein ribosomal protein s30e... [more]
A0A835ZBG9_9STRA5.210e-2646.88Ribosomal protein S30Ae/sigma 54 modulation protei... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036567Ribosome hibernation promotion factor-likeGENE3D3.30.160.100coord: 1..28
e-value: 6.1E-5
score: 25.2
IPR036567Ribosome hibernation promotion factor-likeSUPERFAMILY69754Ribosome binding protein Y (YfiA homologue)coord: 1..34
IPR032528Sigma 54 modulation/S30EA ribosomal protein, C-terminalPFAMPF16321Ribosom_S30AE_Ccoord: 67..122
e-value: 9.7E-23
score: 79.6
IPR038416Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamilyGENE3D3.30.505.50coord: 80..126
e-value: 3.1E-19
score: 70.2
NoneNo IPR availablePANTHERPTHR33231:SF130S RIBOSOMAL PROTEINcoord: 1..128
NoneNo IPR availablePANTHERPTHR33231FAMILY NOT NAMEDcoord: 1..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16162contigEcto-sp13_S_contig16162:1188..3764 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16162.4491.1mRNA_Ecto-sp13_S_contig16162.4491.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16162 1188..3791 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16162.4491.1 ID=prot_Ecto-sp13_S_contig16162.4491.1|Name=mRNA_Ecto-sp13_S_contig16162.4491.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=130bp
MYASVDQVTDRIQRKLRRFKERKVAGMRGRSGLGSLSEKTAEKDMDAAAA
EAADEDPFEDKYGDKPEEMAVMKTKSFPMPAISVEEAVTCLEYIGHDFYL
FRNEETDEVNVVYKRKSGGVGLIEPESEK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036567RHF-like
IPR032528Ribosom_S30AE_C
IPR038416Ribosom_S30AE_C_sf